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Molecular Phylogeny and Morphological
Zootaxa 3390: 1–18 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) Molecular phylogeny and morphological revision of the Ctenotus labillardieri (Reptilia: Squamata: Scincidae) species group and a new species of immediate conservation concern in the southwestern Australian biodiversity hotspot GEOFFREY M. KAY & J. SCOTT KEOGH 1 Division of Evolution, Ecology and Genetics, Research School of Biology, The Australian National University, Canberra, ACT 0200, Australia 1 Corresponding author. E-mail: [email protected] Abstract Ctenotus is the largest and most diverse genus of skinks in Australia with at least 97 described species. We generated large mitochondrial and nuclear DNA data sets for 70 individuals representing all available species in the C. labillardieri species- group to produce the first comprehensive phylogeny for this clade. The widespread C. labillardieri was sampled extensively to provide the first detailed phylogeographic data set for a reptile in the southwestern Australian biodiversity hotspot. We supplemented our molecular data with a comprehensive morphological dataset for the entire group, and together these data are used to revise the group and describe a new species. The morphologically highly variable species C. labillardieri comprises seven well-supported genetic clades that each occupy distinct geographic regions. The phylogeographic patterns observed in this taxon are consistent with studies of frogs, plants and invertebrates, adding strength to emerging biogeographic hypotheses in this iconic region. The species C. catenifer, C. youngsoni, and C. gemmula are well supported, and despite limited sampling both C. catenifer and C. gemmula show substantial genetic structure. -
Resource Allocation to Reproduction in Animals
Biol. Rev. (2014), 89, pp. 849–859. 849 doi: 10.1111/brv.12082 Resource allocation to reproduction in animals Sebastiaan A. L. M. Kooijman1,∗ and Konstadia Lika2 1Department of Theoretical Biology, VU University Amsterdam, de Boelelaan 1087, 1081 HV Amsterdam, The Netherlands 2Department of Biology, University of Crete, Voutes University Campus, 70013 Heraklion, Crete, Greece ABSTRACT The standard Dynamic Energy Budget (DEB) model assumes that a fraction κ of mobilised reserve is allocated to somatic maintenance plus growth, while the rest is allocated to maturity maintenance plus maturation (in embryos and juveniles) or reproduction (in adults). All DEB parameters have been estimated for 276 animal species from most large phyla and all chordate classes. The goodness of fit is generally excellent. We compared the estimated values of κ with those that would maximise reproduction in fully grown adults with abundant food. Only 13% of these species show a reproduction rate close to the maximum possible (assuming that κ can be controlled), another 4% have κ lower than the optimal value, and 83% have κ higher than the optimal value. Strong empirical support hence exists for the conclusion that reproduction is generally not maximised. We also compared the parameters of the wild chicken with those of races selected for meat and egg production and found that the latter indeed maximise reproduction in terms of κ, while surface-specific assimilation was not affected by selection. We suggest that small values of κ relate to the down-regulation of maximum body size, and large values to the down-regulation of reproduction. We briefly discuss the ecological context for these findings. -
Broken Hill Complex
Broken Hill Complex Bioregion resources Photo Mulyangarie, DEH Broken Hill Complex The Broken Hill Complex bioregion is located in western New South Wales and eastern South Australia, spanning the NSW-SA border. It includes all of the Barrier Ranges and covers a huge area of nearly 5.7 million hectares with approximately 33% falling in South Australia! It has an arid climate with dry hot summers and mild winters. The average rainfall is 222mm per year, with slightly more rainfall occurring in summer. The bioregion is rich with Aboriginal cultural history, with numerous archaeological sites of significance. Biodiversity and habitat The bioregion consists of low ranges, and gently rounded hills and depressions. The main vegetation types are chenopod and samphire shrublands; casuarina forests and woodlands and acacia shrublands. Threatened animal species include the Yellow-footed Rock- wallaby and Australian Bustard. Grazing, mining and wood collection for over 100 years has led to a decline in understory plant species and cover, affecting ground nesting birds and ground feeding insectivores. 2 | Broken Hill Complex Photo by Francisco Facelli Broken Hill Complex Threats Threats to the Broken Hill Complex bioregion and its dependent species include: For Further information • erosion and degradation caused by overgrazing by sheep, To get involved or for more information please cattle, goats, rabbits and macropods phone your nearest Natural Resources Centre or • competition and predation by feral animals such as rabbits, visit www.naturalresources.sa.gov.au -
Future Directions in the Research and Management of Marine Snakes
Charles Darwin University Future directions in the research and management of marine snakes Udyawer, Vinay; Barnes, Peter; Bonnet, Xavier; Brischoux, François; Crowe-Riddell, Jenna M.; D'Anastasi, Blanche; Fry, Bryan G.; Gillett, Amber; Goiran, Claire; Guinea, Michael L.; Heatwole, Harold; Heupel, Michelle R.; Hourston, Mathew; Kangas, Mervi; Kendrick, Alan; Koefoed, Inigo; Lillywhite, Harvey B.; Lobo, Aaron S.; Lukoschek, Vimoksalehi; McAuley, Rory; Nitschke, Charlotte; Rasmussen, Arne R.; Sanders, Kate L.; Sheehy, Coleman; Shine, Richard; Somaweera, Ruchira; Sweet, Samuel S.; Voris, Harold K. Published in: Frontiers in Marine Science DOI: 10.3389/fmars.2018.00399 Published: 06/11/2018 Document Version Publisher's PDF, also known as Version of record Link to publication Citation for published version (APA): Udyawer, V., Barnes, P., Bonnet, X., Brischoux, F., Crowe-Riddell, J. M., D'Anastasi, B., Fry, B. G., Gillett, A., Goiran, C., Guinea, M. L., Heatwole, H., Heupel, M. R., Hourston, M., Kangas, M., Kendrick, A., Koefoed, I., Lillywhite, H. B., Lobo, A. S., Lukoschek, V., ... Voris, H. K. (2018). Future directions in the research and management of marine snakes. Frontiers in Marine Science, 5, 1-16. [399]. https://doi.org/10.3389/fmars.2018.00399 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. -
The Herpetofauna of Timor-Leste: a First Report 19 Doi: 10.3897/Zookeys.109.1439 Research Article Launched to Accelerate Biodiversity Research
A peer-reviewed open-access journal ZooKeys 109: 19–86 (2011) The herpetofauna of Timor-Leste: a first report 19 doi: 10.3897/zookeys.109.1439 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research The herpetofauna of Timor-Leste: a first report Hinrich Kaiser1, Venancio Lopes Carvalho2, Jester Ceballos1, Paul Freed3, Scott Heacox1, Barbara Lester3, Stephen J. Richards4, Colin R. Trainor5, Caitlin Sanchez1, Mark O’Shea6 1 Department of Biology, Victor Valley College, 18422 Bear Valley Road, Victorville, California 92395, USA; and The Foundation for Post-Conflict Development, 245 Park Avenue, 24th Floor, New York, New York 10167, USA 2 Universidade National Timor-Lorosa’e, Faculdade de Ciencias da Educaçao, Departamentu da Biologia, Avenida Cidade de Lisboa, Liceu Dr. Francisco Machado, Dili, Timor-Leste 3 14149 S. Butte Creek Road, Scotts Mills, Oregon 97375, USA 4 Conservation International, PO Box 1024, Atherton, Queensland 4883, Australia; and Herpetology Department, South Australian Museum, North Terrace, Adelaide, South Australia 5000, Australia 5 School of Environmental and Life Sciences, Charles Darwin University, Darwin, Northern Territory 0909, Australia 6 West Midland Safari Park, Bewdley, Worcestershire DY12 1LF, United Kingdom; and Australian Venom Research Unit, Department of Pharmacology, University of Melbourne, Vic- toria 3010, Australia Corresponding author: Hinrich Kaiser ([email protected]) Academic editor: Franco Andreone | Received 4 November 2010 | Accepted 8 April 2011 | Published 20 June 2011 Citation: Kaiser H, Carvalho VL, Ceballos J, Freed P, Heacox S, Lester B, Richards SJ, Trainor CR, Sanchez C, O’Shea M (2011) The herpetofauna of Timor-Leste: a first report. ZooKeys 109: 19–86. -
An Annotated Type Catalogue of the Dragon Lizards (Reptilia: Squamata: Agamidae) in the Collection of the Western Australian Museum Ryan J
RECORDS OF THE WESTERN AUSTRALIAN MUSEUM 34 115–132 (2019) DOI: 10.18195/issn.0312-3162.34(2).2019.115-132 An annotated type catalogue of the dragon lizards (Reptilia: Squamata: Agamidae) in the collection of the Western Australian Museum Ryan J. Ellis Department of Terrestrial Zoology, Western Australian Museum, Locked Bag 49, Welshpool DC, Western Australia 6986, Australia. Biologic Environmental Survey, 24–26 Wickham St, East Perth, Western Australia 6004, Australia. Email: [email protected] ABSTRACT – The Western Australian Museum holds a vast collection of specimens representing a large portion of the 106 currently recognised taxa of dragon lizards (family Agamidae) known to occur across Australia. While the museum’s collection is dominated by Western Australian species, it also contains a selection of specimens from localities in other Australian states and a small selection from outside of Australia. Currently the museum’s collection contains 18,914 agamid specimens representing 89 of the 106 currently recognised taxa from across Australia and 27 from outside of Australia. This includes 824 type specimens representing 45 currently recognised taxa and three synonymised taxa, comprising 43 holotypes, three syntypes and 779 paratypes. Of the paratypes, a total of 43 specimens have been gifted to other collections, disposed or could not be located and are considered lost. An annotated catalogue is provided for all agamid type material currently and previously maintained in the herpetological collection of the Western Australian Museum. KEYWORDS: type specimens, holotype, syntype, paratype, dragon lizard, nomenclature. INTRODUCTION Australia was named by John Edward Gray in 1825, The Agamidae, commonly referred to as dragon Clamydosaurus kingii Gray, 1825 [now Chlamydosaurus lizards, comprises over 480 taxa worldwide, occurring kingii (Gray, 1825)]. -
Phylogenetic Structure of Vertebrate Communities Across the Australian
Journal of Biogeography (J. Biogeogr.) (2013) 40, 1059–1070 ORIGINAL Phylogenetic structure of vertebrate ARTICLE communities across the Australian arid zone Hayley C. Lanier*, Danielle L. Edwards and L. Lacey Knowles Department of Ecology and Evolutionary ABSTRACT Biology, Museum of Zoology, University of Aim To understand the relative importance of ecological and historical factors Michigan, Ann Arbor, MI 48109-1079, USA in structuring terrestrial vertebrate assemblages across the Australian arid zone, and to contrast patterns of community phylogenetic structure at a continental scale. Location Australia. Methods We present evidence from six lineages of terrestrial vertebrates (five lizard clades and one clade of marsupial mice) that have diversified in arid and semi-arid Australia across 37 biogeographical regions. Measures of within-line- age community phylogenetic structure and species turnover were computed to examine how patterns differ across the continent and between taxonomic groups. These results were examined in relation to climatic and historical fac- tors, which are thought to play a role in community phylogenetic structure. Analyses using a novel sliding-window approach confirm the generality of pro- cesses structuring the assemblages of the Australian arid zone at different spa- tial scales. Results Phylogenetic structure differed greatly across taxonomic groups. Although these lineages have radiated within the same biome – the Australian arid zone – they exhibit markedly different community structure at the regio- nal and local levels. Neither current climatic factors nor historical habitat sta- bility resulted in a uniform response across communities. Rather, historical and biogeographical aspects of community composition (i.e. local lineage per- sistence and diversification histories) appeared to be more important in explaining the variation in phylogenetic structure. -
Fowlers Gap Biodiversity Checklist Reptiles
Fowlers Gap Biodiversity Checklist ow if there are so many lizards then they should make tasty N meals for someone. Many of the lizard-eaters come from their Reptiles own kind, especially the snake-like legless lizards and the snakes themselves. The former are completely harmless to people but the latter should be left alone and assumed to be venomous. Even so it odern reptiles are at the most diverse in the tropics and the is quite safe to watch a snake from a distance but some like the Md rylands of the world. The Australian arid zone has some of the Mulga Snake can be curious and this could get a little most diverse reptile communities found anywhere. In and around a disconcerting! single tussock of spinifex in the western deserts you could find 18 species of lizards. Fowlers Gap does not have any spinifex but even he most common lizards that you will encounter are the large so you do not have to go far to see reptiles in the warmer weather. Tand ubiquitous Shingleback and Central Bearded Dragon. The diversity here is as astonishing as anywhere. Imagine finding six They both have a tendency to use roads for passage, warming up or species of geckos ranging from 50-85 mm long, all within the same for display. So please slow your vehicle down and then take evasive genus. Or think about a similar diversity of striped skinks from 45-75 action to spare them from becoming a road casualty. The mm long! How do all these lizards make a living in such a dry and Shingleback is often seen alone but actually is monogamous and seemingly unproductive landscape? pairs for life. -
Literature Cited in Lizards Natural History Database
Literature Cited in Lizards Natural History database Abdala, C. S., A. S. Quinteros, and R. E. Espinoza. 2008. Two new species of Liolaemus (Iguania: Liolaemidae) from the puna of northwestern Argentina. Herpetologica 64:458-471. Abdala, C. S., D. Baldo, R. A. Juárez, and R. E. Espinoza. 2016. The first parthenogenetic pleurodont Iguanian: a new all-female Liolaemus (Squamata: Liolaemidae) from western Argentina. Copeia 104:487-497. Abdala, C. S., J. C. Acosta, M. R. Cabrera, H. J. Villaviciencio, and J. Marinero. 2009. A new Andean Liolaemus of the L. montanus series (Squamata: Iguania: Liolaemidae) from western Argentina. South American Journal of Herpetology 4:91-102. Abdala, C. S., J. L. Acosta, J. C. Acosta, B. B. Alvarez, F. Arias, L. J. Avila, . S. M. Zalba. 2012. Categorización del estado de conservación de las lagartijas y anfisbenas de la República Argentina. Cuadernos de Herpetologia 26 (Suppl. 1):215-248. Abell, A. J. 1999. Male-female spacing patterns in the lizard, Sceloporus virgatus. Amphibia-Reptilia 20:185-194. Abts, M. L. 1987. Environment and variation in life history traits of the Chuckwalla, Sauromalus obesus. Ecological Monographs 57:215-232. Achaval, F., and A. Olmos. 2003. Anfibios y reptiles del Uruguay. Montevideo, Uruguay: Facultad de Ciencias. Achaval, F., and A. Olmos. 2007. Anfibio y reptiles del Uruguay, 3rd edn. Montevideo, Uruguay: Serie Fauna 1. Ackermann, T. 2006. Schreibers Glatkopfleguan Leiocephalus schreibersii. Munich, Germany: Natur und Tier. Ackley, J. W., P. J. Muelleman, R. E. Carter, R. W. Henderson, and R. Powell. 2009. A rapid assessment of herpetofaunal diversity in variously altered habitats on Dominica. -
A New Genus of Scolopendrid Centipede (Chilopoda: Scolopendromorpha: Scolopendrini) from the Central Australian Deserts
Zootaxa 3321: 22–36 (2012) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2012 · Magnolia Press ISSN 1175-5334 (online edition) A new genus of scolopendrid centipede (Chilopoda: Scolopendromorpha: Scolopendrini) from the central Australian deserts JULIANNE WALDOCK1 & GREGORY D. EDGECOMBE2 1Department of Terrestrial Zoology, Western Australian Museum, Locked Bag 49, Welshpool, WA 6986, Australia. E-mail: [email protected] 2The Natural History Museum, Department of Palaeontology, Cromwell Road, London SW7 5BD, United Kingdom. E-mail: [email protected] Abstract The first new species of Scolopendridae discovered in Australia since L.E. Koch’s comprehensive revision in the 1980s is named as a new monotypic genus of the Tribe Scolopendrini, Kanparka leki n. gen. n. sp. Its distribution includes the Gibson and Little Sandy Deserts in Western Australia and the western part of the Tanami Desert in the Northern Territory. The new genus is especially distinguished from other scolopendrines by the spinulation of its robust ultimate legs, partic- ular the presence of spines on the femur and tibia in addition to the predominantly irregularly scattered spines on the prefe- mur. Cladistic analysis based on morphological characters resolves Kanparka in a clade with Scolopendra, Arthrorhabdus, Akymnopellis and Hemiscolopendra, within which Scolopendra is non-monophyletic. Key words: Centipedes, Scolopendridae, Western Australia, Northern Territory, taxonomy, phylogeny Introduction The scolopendrid centipedes of Australia were revised in a series of studies by L.E. Koch that drew upon Austra- lian museum collections amassed during survey programs in the 1960s through early 1980s, as well as historical material. -
An Investigation of the Evolution of Australian Elapid Snake Venoms
toxins Article Rapid Radiations and the Race to Redundancy: An Investigation of the Evolution of Australian Elapid Snake Venoms Timothy N. W. Jackson 1, Ivan Koludarov 1, Syed A. Ali 1,2, James Dobson 1, Christina N. Zdenek 1, Daniel Dashevsky 1, Bianca op den Brouw 1, Paul P. Masci 3, Amanda Nouwens 4, Peter Josh 4, Jonathan Goldenberg 1, Vittoria Cipriani 1, Chris Hay 1, Iwan Hendrikx 1, Nathan Dunstan 5, Luke Allen 5 and Bryan G. Fry 1,* 1 Venom Evolution Lab, School of Biological Sciences, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] (T.N.W.J.); [email protected] (I.K.); [email protected] (S.A.A.); [email protected] (J.D.); [email protected] (C.N.Z.); [email protected] (D.D.); [email protected] (B.o.d.B.); [email protected] (J.G.); [email protected] (V.C.); [email protected] (C.H.); [email protected] (I.H.) 2 HEJ Research Institute of Chemistry, International Centre for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi 75270, Pakistan 3 Princess Alexandra Hospital, Translational Research Institute, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] 4 School of Chemistry and Molecular Biosciences, University of Queensland, St Lucia, QLD 4072, Australia; [email protected] (A.N.); [email protected] (P.J.) 5 Venom Supplies, Tanunda, South Australia 5352, Australia; [email protected] (N.D.); [email protected] (L.A.) * Correspondence: [email protected]; Tel.: +61-4-0019-3182 Academic Editor: Nicholas R. -
BS4 Marra Mamba Targeted Fauna Survey V2.2.Docx 3
Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Prepared for Rio Tinto March 2013 Brockman Syncline 4 Marra Mamba Targeted Fauna Survey © Biota Environmental Sciences Pty Ltd 2013 ABN 49 092 687 119 Level 1, 228 Carr Place Leederville Western Australia 6007 Ph: (08) 9328 1900 Fax: (08) 9328 6138 Project No.: 817 Prepared by: David Keirle Zoë Hamilton Penny Brooshooft Document Quality Checking History Version: 1.3 Peer review: Nicola Watson Version: 2.2 Director review: Garth Humphreys Version: 2.2 Format review: Fiona Hedley Approved for issue: Garth Humphreys This document has been prepared to the requirements of the client identified on the cover page and no representation is made to any third party. It may be cited for the purposes of scientific research or other fair use, but it may not be reproduced or distributed to any third party by any physical or electronic means without the express permission of the client for whom it was prepared or Biota Environmental Sciences Pty Ltd. This report has been designed for double-sided printing. Hard copies supplied by Biota are printed on recycled paper. Cube:Current:817 (Marra Mamba Fauna):Documents:BS4 Marra Mamba Targeted Fauna Survey v2.2.docx 3 Brockman Syncline 4 Marra Mamba Targeted Fauna Survey 4 Cube:Current:817 (Marra Mamba Fauna):Documents:BS4 Marra Mamba Targeted Fauna Survey v2.2.docx Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Brockman Syncline 4 Marra Mamba Targeted Fauna Survey Contents 1.0 Summary 9 1.1 Introduction 9 1.2 Methodology 9 1.3 Results 10 1.4 Conservation