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Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
Laboratory Reference Module Summary Report LR22
Laboratory Reference Module Summary Report Benthic Invertebrate Component - 2017/18 LR22 26 March 2018 Author: Tim Worsfold Reviewer: David Hall, NMBAQCS Project Manager Approved by: Myles O'Reilly, Contract Manager, SEPA Contact: [email protected] MODULE / EXERCISE DETAILS Module: Laboratory Reference (LR) Exercises: LR22 Data/Sample Request Circulated: 10th July 2017 Sample Submission Deadline: 31st August 2017 Number of Subscribing Laboratories: 7 Number of LR Received: 4 Contents Table 1. Summary of mis-identified taxa in the Laboratory Reference module (LR22) (erroneous identifications in brackets). Table 2. Summary of identification policy differences in the Laboratory Reference Module (LR22) (original identifications in brackets). Appendix. LR22 individual summary reports for participating laboratories. Table 1. Summary of mis-identified taxa in the Laboratory Reference Module (LR22) (erroneous identifications in brackets). Taxonomic Major Taxonomic Group LabCode Edits Polychaeta Oligochaeta Crustacea Mollusca Other Spio symphyta (Spio filicornis ) - Leucothoe procera (Leucothoe ?richardii ) - - Scolelepis bonnieri (Scolelepis squamata ) - - - - BI_2402 5 Laonice (Laonice sarsi ) - - - - Dipolydora (Dipolydora flava ) - - - - Goniada emerita (Goniadella bobrezkii ) - Nebalia reboredae (Nebalia bipes ) - - Polydora sp. A (Polydora cornuta ) - Diastylis rathkei (Diastylis cornuta ) - - BI_2403 7 Syllides? (Anoplosyllis edentula ) - Abludomelita obtusata (Tryphosa nana ) - in mixture - - Spirorbinae (Ditrupa arietina ) - - - - -
WMSDB - Worldwide Mollusc Species Data Base
WMSDB - Worldwide Mollusc Species Data Base Family: TURBINIDAE Author: Claudio Galli - [email protected] (updated 07/set/2015) Class: GASTROPODA --- Clade: VETIGASTROPODA-TROCHOIDEA ------ Family: TURBINIDAE Rafinesque, 1815 (Sea) - Alphabetic order - when first name is in bold the species has images Taxa=681, Genus=26, Subgenus=17, Species=203, Subspecies=23, Synonyms=411, Images=168 abyssorum , Bolma henica abyssorum M.M. Schepman, 1908 aculeata , Guildfordia aculeata S. Kosuge, 1979 aculeatus , Turbo aculeatus T. Allan, 1818 - syn of: Epitonium muricatum (A. Risso, 1826) acutangulus, Turbo acutangulus C. Linnaeus, 1758 acutus , Turbo acutus E. Donovan, 1804 - syn of: Turbonilla acuta (E. Donovan, 1804) aegyptius , Turbo aegyptius J.F. Gmelin, 1791 - syn of: Rubritrochus declivis (P. Forsskål in C. Niebuhr, 1775) aereus , Turbo aereus J. Adams, 1797 - syn of: Rissoa parva (E.M. Da Costa, 1778) aethiops , Turbo aethiops J.F. Gmelin, 1791 - syn of: Diloma aethiops (J.F. Gmelin, 1791) agonistes , Turbo agonistes W.H. Dall & W.H. Ochsner, 1928 - syn of: Turbo scitulus (W.H. Dall, 1919) albidus , Turbo albidus F. Kanmacher, 1798 - syn of: Graphis albida (F. Kanmacher, 1798) albocinctus , Turbo albocinctus J.H.F. Link, 1807 - syn of: Littorina saxatilis (A.G. Olivi, 1792) albofasciatus , Turbo albofasciatus L. Bozzetti, 1994 albofasciatus , Marmarostoma albofasciatus L. Bozzetti, 1994 - syn of: Turbo albofasciatus L. Bozzetti, 1994 albulus , Turbo albulus O. Fabricius, 1780 - syn of: Menestho albula (O. Fabricius, 1780) albus , Turbo albus J. Adams, 1797 - syn of: Rissoa parva (E.M. Da Costa, 1778) albus, Turbo albus T. Pennant, 1777 amabilis , Turbo amabilis H. Ozaki, 1954 - syn of: Bolma guttata (A. Adams, 1863) americanum , Lithopoma americanum (J.F. -
Phylum MOLLUSCA
285 MOLLUSCA: SOLENOGASTRES-POLYPLACOPHORA Phylum MOLLUSCA Class SOLENOGASTRES Family Lepidomeniidae NEMATOMENIA BANYULENSIS (Pruvot, 1891, p. 715, as Dondersia) Occasionally on Lafoea dumosa (R.A.T., S.P., E.J.A.): at 4 positions S.W. of Eddystone, 42-49 fm., on Lafoea dumosa (Crawshay, 1912, p. 368): Eddystone, 29 fm., 1920 (R.W.): 7, 3, 1 and 1 in 4 hauls N.E. of Eddystone, 1948 (V.F.) Breeding: gonads ripe in Aug. (R.A.T.) Family Neomeniidae NEOMENIA CARINATA Tullberg, 1875, p. 1 One specimen Rame-Eddystone Grounds, 29.12.49 (V.F.) Family Proneomeniidae PRONEOMENIA AGLAOPHENIAE Kovalevsky and Marion [Pruvot, 1891, p. 720] Common on Thecocarpus myriophyllum, generally coiled around the base of the stem of the hydroid (S.P., E.J.A.): at 4 positions S.W. of Eddystone, 43-49 fm. (Crawshay, 1912, p. 367): S. of Rame Head, 27 fm., 1920 (R.W.): N. of Eddystone, 29.3.33 (A.J.S.) Class POLYPLACOPHORA (=LORICATA) Family Lepidopleuridae LEPIDOPLEURUS ASELLUS (Gmelin) [Forbes and Hanley, 1849, II, p. 407, as Chiton; Matthews, 1953, p. 246] Abundant, 15-30 fm., especially on muddy gravel (S.P.): at 9 positions S.W. of Eddystone, 40-43 fm. (Crawshay, 1912, p. 368, as Craspedochilus onyx) SALCOMBE. Common in dredge material (Allen and Todd, 1900, p. 210) LEPIDOPLEURUS, CANCELLATUS (Sowerby) [Forbes and Hanley, 1849, II, p. 410, as Chiton; Matthews. 1953, p. 246] Wembury West Reef, three specimens at E.L.W.S.T. by J. Brady, 28.3.56 (G.M.S.) Family Lepidochitonidae TONICELLA RUBRA (L.) [Forbes and Hanley, 1849, II, p. -
Rachor, E., Bönsch, R., Boos, K., Gosselck, F., Grotjahn, M., Günther, C
Rachor, E., Bönsch, R., Boos, K., Gosselck, F., Grotjahn, M., Günther, C.-P., Gusky, M., Gutow, L., Heiber, W., Jantschik, P., Krieg, H.J., Krone, R., Nehmer, P., Reichert, K., Reiss, H., Schröder, A., Witt, J. & Zettler, M.L. (2013): Rote Liste und Artenlisten der bodenlebenden wirbellosen Meerestiere. – In: Becker, N.; Haupt, H.; Hofbauer, N.; Ludwig, G. & Nehring, S. (Red.): Rote Liste gefährdeter Tiere, Pflanzen und Pilze Deutschlands, Band 2: Meeresorganismen. – Münster (Landwirtschaftsverlag). – Na- turschutz und Biologische Vielfalt 70 (2): S. 81-176. Die Rote Liste gefährdeter Tiere, Pflanzen und Pilze Deutschlands, Band 2: Meeres- organismen (ISBN 978-3-7843-5330-2) ist zu beziehen über BfN-Schriftenvertrieb – Leserservice – im Landwirtschaftsverlag GmbH 48084 Münster Tel.: 02501/801-300 Fax: 02501/801-351 http://www.buchweltshop.de/bundesamt-fuer-naturschutz.html bzw. direkt über: http://www.buchweltshop.de/nabiv-heft-70-2-rote-liste-gefahrdeter-tiere-pflanzen-und- pilze-deutschlands-bd-2-meeresorganismen.html Preis: 39,95 € Naturschutz und Biologische Vielfalt 70 (2) 2013 81 –176 Bundesamtfür Naturschutz Rote Liste und Artenlisten der bodenlebenden wirbellosen Meerestiere 4. Fassung, Stand Dezember 2007, einzelne Aktualisierungenbis 2012 EIKE RACHOR,REGINE BÖNSCH,KARIN BOOS, FRITZ GOSSELCK, MICHAEL GROTJAHN, CARMEN- PIA GÜNTHER, MANUELA GUSKY, LARS GUTOW, WILFRIED HEIBER, PETRA JANTSCHIK, HANS- JOACHIM KRIEG,ROLAND KRONE, PETRA NEHMER,KATHARINA REICHERT, HENNING REISS, ALEXANDER SCHRÖDER, JAN WITT und MICHAEL LOTHAR ZETTLER unter Mitarbeit von MAREIKE GÜTH Zusammenfassung Inden hier vorgelegten Listen für amMeeresbodenlebende wirbellose Tiere (Makrozoo- benthos) aus neun Tierstämmen wurden 1.244 Arten bewertet. Eszeigt sich, dass die Verhältnis- se in den deutschen Meeresgebietender Nord-und Ostsee (inkl. -
The Genital Systems of Trivia Arctica and Trivia Monacha (Prosobranchia, Mesogastropoda) and Tributyltin Induced Imposex1
Zoo1. Beitr. N. F. 34 (3): 349 - 374 (1992) (Institut für Spezielle Zoologie und Vergleichende Embryologie der Westfälischen Wilhelms-Universität Münster) The genital systems of Trivia arctica and Trivia monacha (Prosobranchia, Mesogastropoda) and tributyltin induced imposex1 EBERHARD STROBEN, CHRISTA BROlVlMEL, JORG OEHLMANN and PIO FIORONI Received June 17 , 1992 Summary The mesogastropod prosobranchs Trivia arctica and T. monacha collected along the coast of Brittany and Normandy between 1988 and 1992 exhibit imposex or pseudohermaphroditism (occurrence of male parts in addition to the female genital system) in response to tributyltin (TBT) pollution. Beside some normal females (stage 0) different imposex stages according to the classification of FIORONI et a1. (1991) (3 a, 3 band 4 for T. arctica and 3b and 4 for T. monacha) (Fig. 1) can be distinguished and are documented with scanning electron micrographs for the first time. Additional al terations of the genital tract e.g. excrescences on the vas deferens, a coiled oviduct, a bi- or trifurcated penis or several penes (2 - 5) are described. Neither TBT-induced sterilization nor sex change occur. TBT accumulation in soft parts shows sex-related differences. The VDS (vas deferens sequence) index, uncubed RPS (relative penis size) index and average female penis length of a population are dependent from TBT con centrations in ambient sea water and TBT body burden. A statistical study, based on an analysis of natural populations of T. arctica, T. monacha and Nucella lapillus allows a comparison of the specific TBT sensitivity of the three TBT bioindicators. N. lapillus exhibits a lower threshold for imposex development and a higher TBT sen sitivity, but both Trivia species proved to be suitable TBT bioindicators. -
Endringer I Norsk Marin Bunnfauna 1997-2010 Endringer I Norsk Marin Bunnfauna 1997-2010
UTREDNING DN-utredning 8-2011 Endringer i norsk marin bunnfauna 1997-2010 Endringer i norsk marin bunnfauna 1997-2010 DN-utredning 8-2011 EKSTRAKT: ABSTRACT: I denne utredningen viser Torleiv Bratte- In this report Torleiv Brattegard shows that Utgiver: gard at av de vel 1600 bunnlevende marine of the about 1600 benthic marine species Direktoratet for naturforvaltning artene som tidligere ble definert som syd- that were defined as southern species in lige arter for Norge, det vil si at de hadde Norway in 1997, having their northern Dato: Juni 2011 sin nordgrense ved norskekysten, har 565 distribution limit somewhere on the Nor- arter forflyttet seg lenger nord i tidsperio- wegian coast, 565 species have moved Antall sider: 112 den 1997 - 2010. I gjennomsnitt har disse further north along the coast, on average artene forflyttet seg 75-100 mil på de siste 750-1000 kilometers during the period from Emneord: Marine bunnlevende 13 årene og hele 300 av disse artene er fun- 1997 - 2010. About 300 of these southern organismer, benthos, kartlegging, net så langt nord som den vestlige delen av species have been found in the western part klimaendringer, nye arter, utbredelse Barentshavet og/eller ved Svalbard. of the Barents Sea and/or at Svalbard. Keywords: Marine benthic organisms, Godt over 100 nye arter har kommet fra More than 100 new species from more mapping, distribution, climatic change, mer tempererte områder og har etablert temperate waters have been established new species seg i norske farvann fra 1997 og fram til i in Norwegian waters from 1997 until today. dag. Minst to tredeler av disse artene har At least two thirds of these have entered Bestilling: sannsynligvis kommet via nordvestkysten our seas from Scotland and Shetland, and Direktoratet for naturforvaltning, av Skottland eller Shetland. -
Sequencing a Gene Under Strong Selection Aspartate Aminotransferase in North Atlantic Littorina
Sequencing a Gene under Strong Selection Aspartate Aminotransferase in North Atlantic Littorina Felix Mittermayer Degree project for Master of Science (Two Years) in Biology Degree course in Marine Ecology 45 hec Spring and Autumn 2013 Department of Biological and Environmental Sciences University of Gothenburg Examiner: Kerstin Johannesson Department of Biological and Environmental Sciences University of Gothenburg Supervisor: Marina Panova and Mårten Duvetorp Department of Biological and Environmental Sciences University of Gothenburg ABSTRACT 3 INTRODUCTION 4 NATURAL SELECTION, LOCAL ADAPTION AND ALLOZYME VARIATION 4 SPECIES OF LITTORINA IN NORTH ATLANTIC 4 ASPARTATE AMINOTRANSFERASE ALLOZYME VARIATIONS IN L. SAXATILIS 6 AIM 7 MATERIAL AND METHODS 8 SAMPLING, SAMPLE PREPARATION AND PHENOTYPING 8 DNA AMPLIFICATION AND SEQUENCING 8 DATA ANALYSIS 10 RESULTS 10 DISCUSSION 11 FUTURE WORK 13 REFERENCES 14 FIGURES AND TABLES 17 2 Abstract Natural selection is one of the driving forces of evolution, to understand it we must gain inside into the molecular mechanics that create genetics variation. Allozymes are variants of an enzyme coded for by different alleles, they are generally considered to be under neutral or weak selection. Aspartate aminotransferase (Aat, EC 2.6.1.1) in the rough periwinkle, Littorina saxatilis (Olivi, 1792), has however shown to be under a very stringed selection regime, Aat is an essential part of the anaerobe energy production is molluscs. The two variants of Aat are found over a vertical gradient, Aat100 is predominant (0.7-0.8) in the surf zone while Aat120 is mainly found (0.8-0.9) in the splash zone. After an extinction event of L. -
Rocky Shore Snails As Material for Projects (With a Key for Their Identification)
Field Studies, 10, (2003) 601 - 634 ROCKY SHORE SNAILS AS MATERIAL FOR PROJECTS (WITH A KEY FOR THEIR IDENTIFICATION) J. H. CROTHERS Egypt Cottage, Fair Cross, Washford, Watchet, Somerset TA23 0LY ABSTRACT Rocky sea shores are amongst the best habitats in which to carry out biological field projects. In that habitat, marine snails (prosobranchs) offer the most opportunities for individual investigations, being easy to find, to identify, to count and to measure and beng sufficiently robust to survive the experience. A key is provided for the identification of the larger species and suggestions are made for investigations to exploit selected features of individual species. INTRODUCTION Rocky sea shores offer one of the best habitats for individual or group investigations. Not only is there de facto public access (once you have got there) but also the physical factors that dominate the environment - tides (inundation versus desiccation), waves, heat, cold, light, dark, salinity etc. - change significantly over a few metres in distance. As a bonus, most of the fauna and flora lives out on the open rock surface and patterns of distribution may be clearly visible to the naked eye. Finally, they are amongst the most ‘natural’ of habitats in the British Isles; unless there has been an oil spill, rocky sea shores are unlikely to have been greatly affected by covert human activity. Some 270 species of marine snail (Phylum Mollusca, Class Gastropoda; Sub-Class Prosobranchia) live in the seas around the British Isles (Graham, 1988) and their empty shells may be found on many beaches. Most of these species are small (less than 3 mm long) or live beneath the tidemarks. -
MOLLUSCS Species Names – for Consultation 1
MOLLUSCS species names – for consultation English name ‘Standard’ Gaelic name Gen Scientific name Notes Neologisms in italics der MOLLUSC moileasg m MOLLUSCS moileasgan SEASHELL slige mhara f SEASHELLS sligean mara SHELLFISH (singular) maorach m SHELLFISH (plural) maoraich UNIVALVE SHELLFISH aon-mhogalach m (singular) UNIVALVE SHELLFISH aon-mhogalaich (plural) BIVALVE SHELLFISH dà-mhogalach m (singular) BIVALVE SHELLFISH dà-mhogalaich (plural) LIMPET (general) bàirneach f LIMPETS bàirnich common limpet bàirneach chumanta f Patella vulgata ‘common limpet’ slit limpet bàirneach eagach f Emarginula fissura ‘notched limpet’ keyhole limpet bàirneach thollta f Diodora graeca ‘holed limpet’ china limpet bàirneach dhromanach f Patella ulyssiponensis ‘ridged limpet’ blue-rayed limpet copan Moire m Patella pellucida ‘The Virgin Mary’s cup’ tortoiseshell limpet bàirneach riabhach f Testudinalia ‘brindled limpet’ testudinalis white tortoiseshell bàirneach bhàn f Tectura virginea ‘fair limpet’ limpet TOP SHELL brùiteag f TOP SHELLS brùiteagan f painted top brùiteag dhotamain f Calliostoma ‘spinning top shell’ zizyphinum turban top brùiteag thurbain f Gibbula magus ‘turban top shell’ grey top brùiteag liath f Gibbula cineraria ‘grey top shell’ flat top brùiteag thollta f Gibbula umbilicalis ‘holed top shell’ pheasant shell slige easaig f Tricolia pullus ‘pheasant shell’ WINKLE (general) faochag f WINKLES faochagan f banded chink shell faochag chlaiseach bhannach f Lacuna vincta ‘banded grooved winkle’ common winkle faochag chumanta f Littorina littorea ‘common winkle’ rough winkle (group) faochag gharbh f Littorina spp. ‘rough winkle’ small winkle faochag bheag f Melarhaphe neritoides ‘small winkle’ flat winkle (2 species) faochag rèidh f Littorina mariae & L. ‘flat winkle’ 1 MOLLUSCS species names – for consultation littoralis mudsnail (group) seilcheag làthaich f Fam. -
Marine Ecology Progress Series 555:79
The following supplements accompany the article Spatial and temporal structure of the meroplankton community in a sub- Arctic shelf system Marc J. Silberberger*, Paul E. Renaud, Boris Espinasse, Henning Reiss *Corresponding author: [email protected] Marine Ecology Progress Series 555: 79–93 (2016) SUPPLEMENTS Supplement 1. Compiled list of sampled taxa Crustacea: Decapoda: Galathea sp. Munida sp. Philocheras bispinosus bispinosus Carcinus maenas Cancer pagurus Caridion gordoni Eualus pusiolus Lebbeus sp. Polybiidae Hyas sp. Pandalus montagui Atlantopandalus propinqvus Pagurus bernhardus Pagurus pubescens Anapagurus sp. Anapagurus laevis Cirripedia: Verruca stroemia Balanus balanus Semibalanus balanoides Balanus crenatus Lepadidae Bryozoa: Membranipora membranacea Electra pilosa Polychaeta: Amphinomidae Chaetopteridae Spionidae Phyllodocidae 1 Pectinariidae Nephtyidae Polynoidae Aphroditidae Arenicolidae Trochophora (unknown) Syllidae Mollusca: Bivalvia: Hiatella – Type Mya – Type Mytilidae – Type Cardiidae – Type Anomiidae – Type Gastropoda: Velutina velutina Lamellaria latens Lamellaria perspicua Trivia arctica Littorinimorpha – Type Raphitoma linearis Mangelia attenuata Turritella communis Melanella sp. Nudibranchia Pleurobranchomorpha Cephalaspidea & Sacoglossa Pyramidellidae Echinodermata: Ophiuroidea Echinoidea Asteroidea Holothuroidea Various: Nemertea Enteropneusta Phoronida Sipuncula Platyhelminthes Hydrozoa (Actinula) Anthozoa Planula Ascidiacea Unidentified -
LA MALACOFAUNA DEL YACIMIENTO DE LA PEÑA DE ESTEBANVELA (SEGOVIA) Jesús F
4•La Peña.qxd 18/9/07 09:27 Página 107 LA MALACOFAUNA DEL YACIMIENTO DE LA PEÑA DE ESTEBANVELA (SEGOVIA) Jesús F. Jordá Pardo Universidad Nacional de Educación a Distancia. Departamento de Prehistoria y Arqueología. Senda del Rey, 7. E-28040 Madrid. [email protected] 107 RESUMEN ABSTRACT El yacimiento arqueológico del Pleistoceno superior final de La The archaeological site of La Peña de Estebanvela has pro- Peña de Estebanvela ha proporcionado una interesante colec- vided an interesting malacological collection integrated by 389 ción malacológica integrada por 389 individuos correspondien- individuals corresponding to 11 different taxa. Of these, 5 are tes a 11 taxones diferentes. De estos, 5 son gasterópodos continental gastropods (Theodoxus fluviatilis, Melanopsis sp., continentales (Theodoxus fluviatilis, Melanopsis sp., Helicella Helicella unifasciata, Jaminia quadridens and Gastropoda unifasciata, Jaminia quadridens y Gastropoda indet.), 5 son gas- indet.), 5 are marine gastropods (Littorina obtusata, Trivia arc- terópodos marinos (Littorina obtusata, Trivia arctica, Columbe- tica, Columbella rustica, Nassarius reticulatus and Cyclope ner- lla rustica, Nassarius reticulatus y Cyclope neritea) y 1 es un itea) and 1 is a fragment of marine bivalve (Pecten maximus). fragmento de bivalvo marino (Pecten maximus). Por niveles, los For levels, the three superiors are the richest quantitative and tres superiores son los más ricos tanto cuantitativa como cuali- qualitatively, whereas the three low ones present a scanty pres- tativamente, mientras que los tres inferiores presentan una baja ence of mollusks, basically represented by the continental gas- presencia de moluscos, básicamente representados por los gas- tropods. We could have established four sets: ornamental set, terópodos continentales.