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Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
Annelida, Polychaeta, Chaetopteridae), with Re- Chaetopteridae), with Re-Description of M
2 We would like to thank the Zoological Journal of the Linnean Society, The Linnean Society of London and Blackwell Publishing for accepting our manuscript entitled “Description of a Description of a new species of Mesochaetopterus (Annelida, Polychaeta, new species of Mesochaetopterus (Annelida, Polychaeta, Chaetopteridae), with re- Chaetopteridae), with re-description of M. xerecus and an approach to the description of M. xerecus and an approach to the phylogeny of the family”, which has phylogeny of the family been published in the Journal issue Zool. J. Linnean Soc. 2008, 152: 201–225. D. MARTIN1,* J. GIL1, J. CARRERAS-CARBONELL1 and M. BHAUD2 By posting this version of the manuscript (i.e. pre-printed), we agree not to sell or reproduce the Article or any part of it for commercial purposes (i.e. for monetary gain on your own 1Centre d'Estudis Avançats de Blanes (CSIC), Carrer d’accés a la Cala Sant Francesc 14, account or on that of a third party, or for indirect financial gain by a commercial entity), and 17300 Blanes (Girona), Catalunya (Spain). we expect the same from the users. 2 Observatoire Océanologique de Banyuls, Université P. et M. Curie - CNRS, BP 44, 66650 As soon as possible, we will add a link to the published version of the Article at the editors Banyuls-sur-Mer, Cedex, France. web site. * Correspondence author: Daniel Martin. Centre d'Estudis Avançats de Blanes (CSIC), Carrer Daniel Martin, Joao Gil, Michel Bhaud & Josep Carreras-Carbonell d’accés a la Cala Sant Francesc 14, 17300 Blanes (Girona), Catalunya (Spain). Tel. +34972336101; Fax: +34 972337806; E-mail: [email protected]. -
Annelida, Amphinomidae) in the Mediterranean Sea with an Updated Revision of the Alien Mediterranean Amphinomids
A peer-reviewed open-access journal ZooKeys 337: 19–33 (2013)On the occurrence of the firewormEurythoe complanata complex... 19 doi: 10.3897/zookeys.337.5811 RESEARCH ARTICLE www.zookeys.org Launched to accelerate biodiversity research On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids Andrés Arias1, Rômulo Barroso2,3, Nuria Anadón1, Paulo C. Paiva4 1 Departamento de Biología de Organismos y Sistemas (Zoología), Universidad de Oviedo, Oviedo 33071, Spain 2 Pontifícia Universidade Católica do Rio de Janeiro , Rio de Janeiro, Brazil 3 Museu de Zoologia da Unicamp, Campinas, SP, Brazil 4 Departamento de Zoologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ) , Rio de Janeiro, RJ, Brasil Corresponding author: Andrés Arias ([email protected]) Academic editor: C. Glasby | Received 17 June 2013 | Accepted 19 September 2013 | Published 30 September 2013 Citation: Arias A, Barroso R, Anadón N, Paiva PC (2013) On the occurrence of the fireworm Eurythoe complanata complex (Annelida, Amphinomidae) in the Mediterranean Sea with an updated revision of the alien Mediterranean amphinomids. ZooKeys 337: 19–33. doi: 10.3897/zookeys.337.5811 Abstract The presence of two species within the Eurythoe complanata complex in the Mediterranean Sea is reported, as well as their geographical distributions. One species, Eurythoe laevisetis, occurs in the eastern and cen- tral Mediterranean, likely constituting the first historical introduction to the Mediterranean Sea and the other, Eurythoe complanata, in both eastern and Levantine basins. Brief notes on their taxonomy are also provided and their potential pathways for introduction to the Mediterranean are discussed. -
SCAMIT Newsletter Vol. 1 No. 2 1982
TAXONOMIC INTERCAL1BRAT10N NEWSLETTER May, 1932 Number 2 Next Scheduled Meeting: June lA, 1982 at 9:30 a.m. Place: Marine Biological Consultants 9^7 Newhal1 Street Costa Mesa, California 92627 Topic Taxonomic Group: Amphinomidae, Euphrosinidae, Phyllodocidae MINUTES FROM MAY 17, 1982 Name Fourteen different names with accompanying acronyms were suggested. Because there were so many, it was decided to vote for a name by ballot and talley the results at the June meeting. One ballot is enclosed in this Newsletter. Please bring it to the next meeting or mail it to Ann Martin by June 11. Make additional copies of the ballot for each member of your Company. Dues Unfortunately dues are going to be ch-arged. The dues will help defray costs incurred for storing the reference collection, paper, postage, and other unforeseen expenses. Dues will be $5.00 per year beginning June, 1982. This amount will be adjusted after six months if it is insufficient. Dues will be collected at the June meeting. For those unable to attend the meeting, dues can be mailed to.Ann Martin and a receipt will be mailed back. Specimen Exchange. Several points concerning the specimen exchange were brought out that will help. - Participants should be responsible for getting their specimens to the meeting, either in person or by mail. - Mark the specimens sequentially to prevent mixing of different groups. - Bring the voucher specimens to meeting to check them with ones from the specimen exchange. - When deciding what species to select for the specimen exchange, first call Tony Phillips, (213) 322-3131 extension 269, and tell him what you plan to bring in. -
In the Atlantic-Mediterranean Biogeographic Area
SPECIES OF SPIOCHAETOPTERUS (POLYCHAETA, CHAETOPTERIDAE) IN THE ATLANTIC-MEDITERRANEAN BIOGEOGRAPHIC AREA MICHEL R. BHAUD BHAUD, MICHEL R. 1998 08 28. Species of Spiochaetopterus (Polychaeta, Chaetopteridae) in the Atlantic- SARSIA Mediterranean biogeographic area. – Sarsia 83:243-263. Bergen. ISSN 0036-4827. Five species of the genus Spiochaetopterus: S. typicus SARS, S. bergensis GITAY, S. costarum (CLAPARÈDE), S. oculatus WEBSTER, and S. solitarius (RIOJA) have been compared. These species can be divided into two groups: group A, with boreal biogeographic affinity, consisting of S. typicus and S. bergensis; group B, with temperate biogeographic affinity, consisting of S. costarum, S. solitarius and S. oculatus. The two groups differ in the shape of the specialized setae of segment A4, the number of segments in region B, and the structure of the tube. Representatives of group A have a middle region of two seg- ments, modified setae of segment A4 are distally rhomboid and the tubes are without articulations. Representatives of group B have a middle region of many, always more than 2 segments; modified setae of A4 are distally cordate, and the tubes are with articulations. In each geographic unit of the Atlantic-Mediterranean area, the species are divided into two groups of different sizes. The usefulness of such systematic characters as the number of segments in region B, ornamentation of the tubes and relative size of the pro- and peristomium is reexamined. New characters include the detailed morphol- ogy of the A4 setae, location of the secretory part of the ventral shield, and the structure of the secretory pores. Two diagnostic keys to species, one based on the tubes and the other on the A4 setae, are included. -
A Bioturbation Classification of European Marine Infaunal
A bioturbation classification of European marine infaunal invertebrates Ana M. Queiros 1, Silvana N. R. Birchenough2, Julie Bremner2, Jasmin A. Godbold3, Ruth E. Parker2, Alicia Romero-Ramirez4, Henning Reiss5,6, Martin Solan3, Paul J. Somerfield1, Carl Van Colen7, Gert Van Hoey8 & Stephen Widdicombe1 1Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, U.K. 2The Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 OHT, U.K. 3Department of Ocean and Earth Science, National Oceanography Centre, University of Southampton, Waterfront Campus, European Way, Southampton SO14 3ZH, U.K. 4EPOC – UMR5805, Universite Bordeaux 1- CNRS, Station Marine d’Arcachon, 2 Rue du Professeur Jolyet, Arcachon 33120, France 5Faculty of Biosciences and Aquaculture, University of Nordland, Postboks 1490, Bodø 8049, Norway 6Department for Marine Research, Senckenberg Gesellschaft fu¨ r Naturforschung, Su¨ dstrand 40, Wilhelmshaven 26382, Germany 7Marine Biology Research Group, Ghent University, Krijgslaan 281/S8, Ghent 9000, Belgium 8Bio-Environmental Research Group, Institute for Agriculture and Fisheries Research (ILVO-Fisheries), Ankerstraat 1, Ostend 8400, Belgium Keywords Abstract Biodiversity, biogeochemical, ecosystem function, functional group, good Bioturbation, the biogenic modification of sediments through particle rework- environmental status, Marine Strategy ing and burrow ventilation, is a key mediator of many important geochemical Framework Directive, process, trait. processes in marine systems. In situ quantification of bioturbation can be achieved in a myriad of ways, requiring expert knowledge, technology, and Correspondence resources not always available, and not feasible in some settings. Where dedi- Ana M. Queiros, Plymouth Marine cated research programmes do not exist, a practical alternative is the adoption Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, U.K. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department. -
Polychaeta Lana Crumrine
Polychaeta Lana Crumrine Well over 200 species of the class Polychaeta are found in waters off the shores of the Pacific Northwest. Larval descriptions are not available for the majority of these species, though descriptions are available of the larvae for at least some species from most families. This chapter provides a dichotomous key to the polychaete larvae to the family level for those families with known or suspected pelagic larva. Descriptions have be $in gleaned from the literature from sites worldwide, and the keys are based on the assumption that developmental patterns are similar in different geographical locations. This is a large assumption; there are cases in which development varies with geography (e.g., Levin, 1984). Identifying polychaetes at the trochophore stage can be difficult, and culturing larvae to advanced stages is advised by several experts in the field (Bhaud and Cazaux, 1987; Plate and Husemann, 1994). Reproduction, Development, and Morphology Within the polychaetes, the patterns of reproduction and larval development are quite variable. Sexes are separate in most species, though hermaphroditism is not uncommon. Some groups undergo a process called epitoky at sexual maturation; benthic adults develop swimming structures, internal organs degenerate, and mating occurs between adults swimming in the water column. Descriptions of reproductive pattern, gamete formation, and spawning can be found in Strathmann (1987). Larval polychaetes generally develop through three stages: the trochophore, metatrochophore, and nectochaete stages. Trochophores are ciliated larvae (see Fig. 1).A band of cilia, the prototroch, is used for locomotion and sometimes feeding. Trochophore larvae are generally broad anteriorly and taper posteriorly. -
Symbiontsms Final
being cryptic. Accordingly, this fauna tends to remain virtually unknown, especially in Scale-worms (Polychaeta, Polynoidae) associated with tropical and deep waters. chaetopterid worms (Polychaeta, Chaetopteridae), with Among marine animals, the class Polychaeta includes one of the highest number description of a new genus and species of symbiotic species, with more than 370 symbionts according to Martin and Britayev (1998). Symbiotic polychaetes are associated with nearly all main taxa of marine metazoans (excluding flatworms, nemerteans and nematodes) and even with protozoans. + *± T. A. BRITAYEV and D. MARTIN However, they clearly prefer organisms providing them with good shelter, such as burrowing or tube-dwelling animals (viz. sipunculids, balanoglossids, tubicolous + A.N. Severtzov Institute of Ecology and Evolution (RAS), Leninsky pr. 33, 117071 Moscow, Russia. polychaetes). The durable and long tubes of chaetopterid worms (Polychaeta, Telephone: +0951247950. Fax: +0959545554. E-mail: [email protected] Chaetopteridae) probably offer one of the most “comfortable” habitats for symbiotic ±* Centre d’Estudis Avançats de Blanes (CSIC), carrer d’accés a la Cala Sant Francesc 14, Blanes (Girona), Catalunya (Spain). Telephone: +34972336101. Fax: +34972337806. E-mail: [email protected] polychaetes (Petersen & Britayev 1997) and shelter at least 17 species of facultative and obligate polychaete species (Martin & Britayev 1998). Three species of scale-worms inhabiting chaetopterid tubes have been found during routine studies During studies of the structure of bottom communities performed by the authors of benthic communities. Anotochaetonoe michelbhaudi gen. et sp. nov. occurred in the E Atlantic along the coasts of Congo (Atlantic Ocean), France (Mediterranean Sea) and Vietnam off Congo in association with Spiochaetopterus sp. -
A New Deep-Sea Species of Chloeia
Journal of the Marine Biological Association of the United Kingdom, 2011, 91(2), 419–423. # Marine Biological Association of the United Kingdom, 2010 doi:10.1017/S0025315410001499 A new deep-sea species of Chloeia (Polychaeta: Amphinomidae) from southern Brazil ro^mulo barroso and paulo cesar paiva Universidade Federal do Rio de Janeiro, Departamento de Zoologia, IB, CCS, Bl.A, SS 108, Ilha do Funda˜o, 21941-590, Rio de Janeiro-RJ, Brazil A new species of Chloeia (Annelida: Amphinomidae) is described from deep water (750–1045 m) off southern Brazil. Chloeia kudenovi sp. nov. differ from previously described species by the extremely elongated neuropodial cirri of the second chaetiger, number and position of noto- and neuroaciculae and lack of body pigmentation. This study provides additional data on the morphological diversity of the genus. Keywords: Polychaeta, Amphinomidae, Chloeia, deep sea, Brazil, Rio de Janeiro Submitted 6 February 2009; accepted 5 August 2010; first published online 11 November 2010 INTRODUCTION (originally described from the Mediterranean Sea) is the only other species of the genus recorded to date in Atlantic waters Chloeia was established by Lamarck (1818) to accommodate (Fauvel, 1923; Kirkegaard, 2001). Despite the fact that most Chloeia flava described from the Indian Ocean by Pallas in Chloeia species were described from shallow waters, few of 1766. The genus was morphologically characterized by those species have been referred to moderate deep-waters having an elliptical body with bipinnate branchiae. This (e.g. C. pinnata Moore, 1911, California, 567 m (Kudenov, kind of branchiae is shared with the monotypic genera 1995); C. venusta Quatrefages, 1866, north-west Africa, Bathychloeia Horst, 1912 and Chloenopsis Fauchald, 1977.