Annelida, Polychaeta, Chaetopteridae), with Re- Chaetopteridae), with Re-Description of M
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Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
New Insights in the Biogeographical Distributions of Two Spionidae (Annelida) from the NE Atlantic and Mediterranean French Coasts
Zoosymposia 19: 173–184 (2020) ISSN 1178-9905 (print edition) https://www.mapress.com/j/zs ZOOSYMPOSIA Copyright © 2020 · Magnolia Press ISSN 1178-9913 (online edition) https://doi.org/10.11646/zoosymposia.19.1.18 http://zoobank.org/urn:lsid:zoobank.org:pub:7CF4D06E-47F9-48C5-9703-5CECFD9C1491 New insights in the biogeographical distributions of two Spionidae (Annelida) from the NE Atlantic and Mediterranean French coasts JÉRÔME JOURDE1,5*, NICOLAS LAVESQUE2,7, CÉLINE LABRUNE3,10, JEAN-MICHEL AMOUR- OUX3,12, PAULO BONIFÁCIO3,11, SUZIE HUMBERT2,8, BASTIEN LAMARQUE2,9, PIERRE-GUY SAURIAU1,6 & KARIN MEIßNER4,13 1La Rochelle Université, CNRS, UMR 7266 LIENSs, 2 rue Olympe de Gouges 17000 La Rochelle, France 2Université de Bordeaux, CNRS, UMR 5805 EPOC, Station Marine d’Arcachon, 2 rue du Professeur Jolyet, 33120 Arcachon, France 3Sorbonne Université, CNRS, UMR LECOB 8222, Laboratoire d’Ecogéochimie des Environnements Benthiques, Observatoire Océanologique de Banyuls, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France 4Senckenberg Forschungsinstitute und Naturmuseen (SFN), Deutsches Zentrum für Marine Biodiversitätsforschung, Biozentrum Grindel, Martin-Luther-King-Platz 3, D-20146 Hamburg, Germany 5 [email protected], https://orcid.org/0000-0001-7260-8419 6 [email protected], https://orcid.org/0000-0002-5360-8728 7 [email protected], https://orcid.org/0000-0001-5701-2393 8 [email protected], https://orcid.org/0000-0003-4254-3567 9 [email protected], https://orcid.org/0000-0002-1418-9049 10 [email protected], -
Boccardia Proboscidea Class: Polychaeta, Sedentaria, Canalipalpata
Phylum: Annelida Boccardia proboscidea Class: Polychaeta, Sedentaria, Canalipalpata Order: Spionida, Spioniformia A burrowing spionid worm Family: Spionidae Taxonomy: Boccardia proboscidea’s senior Trunk: subjective synonym, Polydora californica Posterior: Pygidium is a round, flaring (Treadwell, 1914) and an un-typified name, disc with four unequal lobes where dorsal Spio californica (Fewkes, 1889) were both lobes are smaller (Fig. 4) (Hartman 1969). suppressed in 2012 by the International Parapodia: Biramous after first setiger. Commission on Zoological Nomenclature Podia on the first setiger are not lobed, small (ICZN, case 3520). The widely cited and and inconspicuous. The second setiger's used name, Boccardia proboscidea parapodial lobes become twice as large as (Hartman, 1940) was conserved (ICZN the first's, and continue to worm posterior. 2012). Setae (chaetae): All setae are simple and in- clude bunches of short, capillary spines to se- Description tiger six (except for modified setiger five) Size: Specimens up to 30–35 mm in length (Figs. 5a, b). A transverse row of and 1.5 mm in width, where length extends approximately eight neuropodial uncini with age (Hartman 1940). The illustrated (hooded hooks) with bifid (two-pronged) tips specimen has approximately 130 segments begins on setiger seven and continues to (Fig. 1). posterior end (Fig. 5e), with bunches of Color: Yellow-orange with red branchiae capillary setae below them (until setiger 11). and dusky areas around prostomium and Notosetae of setiger five are heavy, dark and parapodia (Hartman 1969). Sato-Okoshi arranged vertically in two rows of five with and Okoshi (1997) report black pigment fol- pairs of long, falcate spines (Fig. -
Mitochondrial Genomes of Two Polydora
www.nature.com/scientificreports OPEN Mitochondrial genomes of two Polydora (Spionidae) species provide further evidence that mitochondrial architecture in the Sedentaria (Annelida) is not conserved Lingtong Ye1*, Tuo Yao1, Jie Lu1, Jingzhe Jiang1 & Changming Bai2 Contrary to the early evidence, which indicated that the mitochondrial architecture in one of the two major annelida clades, Sedentaria, is relatively conserved, a handful of relatively recent studies found evidence that some species exhibit elevated rates of mitochondrial architecture evolution. We sequenced complete mitogenomes belonging to two congeneric shell-boring Spionidae species that cause considerable economic losses in the commercial marine mollusk aquaculture: Polydora brevipalpa and Polydora websteri. The two mitogenomes exhibited very similar architecture. In comparison to other sedentarians, they exhibited some standard features, including all genes encoded on the same strand, uncommon but not unique duplicated trnM gene, as well as a number of unique features. Their comparatively large size (17,673 bp) can be attributed to four non-coding regions larger than 500 bp. We identifed an unusually large (putative) overlap of 14 bases between nad2 and cox1 genes in both species. Importantly, the two species exhibited completely rearranged gene orders in comparison to all other available mitogenomes. Along with Serpulidae and Sabellidae, Polydora is the third identifed sedentarian lineage that exhibits disproportionally elevated rates of mitogenomic architecture rearrangements. Selection analyses indicate that these three lineages also exhibited relaxed purifying selection pressures. Abbreviations NCR Non-coding region PCG Protein-coding gene Metazoan mitochondrial genomes (mitogenomes) usually encode the set of 37 genes, comprising 2 rRNAs, 22 tRNAs, and 13 proteins, encoded on both genomic strands. -
In the Atlantic-Mediterranean Biogeographic Area
SPECIES OF SPIOCHAETOPTERUS (POLYCHAETA, CHAETOPTERIDAE) IN THE ATLANTIC-MEDITERRANEAN BIOGEOGRAPHIC AREA MICHEL R. BHAUD BHAUD, MICHEL R. 1998 08 28. Species of Spiochaetopterus (Polychaeta, Chaetopteridae) in the Atlantic- SARSIA Mediterranean biogeographic area. – Sarsia 83:243-263. Bergen. ISSN 0036-4827. Five species of the genus Spiochaetopterus: S. typicus SARS, S. bergensis GITAY, S. costarum (CLAPARÈDE), S. oculatus WEBSTER, and S. solitarius (RIOJA) have been compared. These species can be divided into two groups: group A, with boreal biogeographic affinity, consisting of S. typicus and S. bergensis; group B, with temperate biogeographic affinity, consisting of S. costarum, S. solitarius and S. oculatus. The two groups differ in the shape of the specialized setae of segment A4, the number of segments in region B, and the structure of the tube. Representatives of group A have a middle region of two seg- ments, modified setae of segment A4 are distally rhomboid and the tubes are without articulations. Representatives of group B have a middle region of many, always more than 2 segments; modified setae of A4 are distally cordate, and the tubes are with articulations. In each geographic unit of the Atlantic-Mediterranean area, the species are divided into two groups of different sizes. The usefulness of such systematic characters as the number of segments in region B, ornamentation of the tubes and relative size of the pro- and peristomium is reexamined. New characters include the detailed morphol- ogy of the A4 setae, location of the secretory part of the ventral shield, and the structure of the secretory pores. Two diagnostic keys to species, one based on the tubes and the other on the A4 setae, are included. -
A Bioturbation Classification of European Marine Infaunal
A bioturbation classification of European marine infaunal invertebrates Ana M. Queiros 1, Silvana N. R. Birchenough2, Julie Bremner2, Jasmin A. Godbold3, Ruth E. Parker2, Alicia Romero-Ramirez4, Henning Reiss5,6, Martin Solan3, Paul J. Somerfield1, Carl Van Colen7, Gert Van Hoey8 & Stephen Widdicombe1 1Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, U.K. 2The Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 OHT, U.K. 3Department of Ocean and Earth Science, National Oceanography Centre, University of Southampton, Waterfront Campus, European Way, Southampton SO14 3ZH, U.K. 4EPOC – UMR5805, Universite Bordeaux 1- CNRS, Station Marine d’Arcachon, 2 Rue du Professeur Jolyet, Arcachon 33120, France 5Faculty of Biosciences and Aquaculture, University of Nordland, Postboks 1490, Bodø 8049, Norway 6Department for Marine Research, Senckenberg Gesellschaft fu¨ r Naturforschung, Su¨ dstrand 40, Wilhelmshaven 26382, Germany 7Marine Biology Research Group, Ghent University, Krijgslaan 281/S8, Ghent 9000, Belgium 8Bio-Environmental Research Group, Institute for Agriculture and Fisheries Research (ILVO-Fisheries), Ankerstraat 1, Ostend 8400, Belgium Keywords Abstract Biodiversity, biogeochemical, ecosystem function, functional group, good Bioturbation, the biogenic modification of sediments through particle rework- environmental status, Marine Strategy ing and burrow ventilation, is a key mediator of many important geochemical Framework Directive, process, trait. processes in marine systems. In situ quantification of bioturbation can be achieved in a myriad of ways, requiring expert knowledge, technology, and Correspondence resources not always available, and not feasible in some settings. Where dedi- Ana M. Queiros, Plymouth Marine cated research programmes do not exist, a practical alternative is the adoption Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, U.K. -
Convergent Evolution of the Ladder-Like Ventral Nerve Cord in Annelida Conrad Helm1*, Patrick Beckers2, Thomas Bartolomaeus2, Stephan H
Helm et al. Frontiers in Zoology (2018) 15:36 https://doi.org/10.1186/s12983-018-0280-y RESEARCH Open Access Convergent evolution of the ladder-like ventral nerve cord in Annelida Conrad Helm1*, Patrick Beckers2, Thomas Bartolomaeus2, Stephan H. Drukewitz3, Ioannis Kourtesis1, Anne Weigert4, Günter Purschke5, Katrine Worsaae6, Torsten H. Struck7 and Christoph Bleidorn1,8* Abstract Background: A median, segmented, annelid nerve cord has repeatedly been compared to the arthropod and vertebrate nerve cords and became the most used textbook representation of the annelid nervous system. Recent phylogenomic analyses, however, challenge the hypothesis that a subepidermal rope-ladder-like ventral nerve cord (VNC) composed of a paired serial chain of ganglia and somata-free connectives represents either a plesiomorphic or a typical condition in annelids. Results: Using a comparative approach by combining phylogenomic analyses with morphological methods (immunohistochemistry and CLSM, histology and TEM), we compiled a comprehensive dataset to reconstruct the evolution of the annelid VNC. Our phylogenomic analyses generally support previous topologies. However, the so far hard-to-place Apistobranchidae and Psammodrilidae are now incorporated among the basally branching annelids with high support. Based on this topology we reconstruct an intraepidermal VNC as the ancestral state in Annelida. Thus, a subepidermal ladder-like nerve cord clearly represents a derived condition. Conclusions: Based on the presented data, a ladder-like appearance of the ventral nerve cord evolved repeatedly, and independently of the transition from an intraepidermal to a subepidermal cord during annelid evolution. Our investigations thereby propose an alternative set of neuroanatomical characteristics for the last common ancestor of Annelida or perhaps even Spiralia. -
OREGON ESTUARINE INVERTEBRATES an Illustrated Guide to the Common and Important Invertebrate Animals
OREGON ESTUARINE INVERTEBRATES An Illustrated Guide to the Common and Important Invertebrate Animals By Paul Rudy, Jr. Lynn Hay Rudy Oregon Institute of Marine Biology University of Oregon Charleston, Oregon 97420 Contract No. 79-111 Project Officer Jay F. Watson U.S. Fish and Wildlife Service 500 N.E. Multnomah Street Portland, Oregon 97232 Performed for National Coastal Ecosystems Team Office of Biological Services Fish and Wildlife Service U.S. Department of Interior Washington, D.C. 20240 Table of Contents Introduction CNIDARIA Hydrozoa Aequorea aequorea ................................................................ 6 Obelia longissima .................................................................. 8 Polyorchis penicillatus 10 Tubularia crocea ................................................................. 12 Anthozoa Anthopleura artemisia ................................. 14 Anthopleura elegantissima .................................................. 16 Haliplanella luciae .................................................................. 18 Nematostella vectensis ......................................................... 20 Metridium senile .................................................................... 22 NEMERTEA Amphiporus imparispinosus ................................................ 24 Carinoma mutabilis ................................................................ 26 Cerebratulus californiensis .................................................. 28 Lineus ruber ......................................................................... -
Chaetopterus Variopedatus
Vol. 56: 157-168, 1989 MARINE ECOLOGY PROGRESS SERIES Published August 10 Mar. Ecol. Prog. Ser. / Properties and energy cost of the muscular piston pump in the suspension feeding polychaete Chaetopterus variopedatus Hans Ulrik RiisgArd Institute of Biology, University of Odense, Campusvej 55, DK-5230 Odense M, Denmark ABSTRACT: The energetics of the muscular piston pump were studied for the filter-feeding polychaete Chaetopterus variopedatus. Agreement between clearance rates and directly measured pumping rates showed that worms transferred to glass tubes may filter at rates comparable to those of the worm in its natural tube. The respiration rate (R, g1 O2h-') as a function of dry weight (W, mg) was: R = 1.90 wO-~'. Water-processing capacities of 25 to 50 1 of water filtered per m1 O2 consumed were found for a 'standard' 50 mg dry weight worm pumping 150 to 300 p1 water S-'. The relation between imposed hydrostatic back pressure, AHI2,and pumping rate, P, (the back pressure-pumping rate characteristic) was measured, and the maximum pressure head, AH~,,varied between 5 and 8.6 mm H20. Video recorlngs were used for analysis of the pump which operated by a 'pos~tivebsplacement pump mechanism', i.e.:P = A f L,, where A is the effective piston area, f = stroke frequency of parapods, L, = stroke length of parapods. The stroke volume of the parapods and f decreased with increasing back pressures, and usually the worms responded to the imposed back pressure by reversing themselves in the glass tube. The pump pressure was expressed as: AH, = AH, (system resistance) = AH, (pressure loss in mucous net-bag) + AHk (loss of kinetic energy in terminal constrictions of the tube) + AH, (frictional resistance in tube system) + AHI2 (back pressure). -
How to Cite Complete Issue More Information About This Article
Revista de Biología Tropical ISSN: 0034-7744 ISSN: 0034-7744 Universidad de Costa Rica Bremec, Claudia-S.; Schejter, Laura Chaetopterus antarcticus (Polychaeta: Chaetopteridae) in Argentinian shelf scallop beds: from infaunal to epifaunal life habits Revista de Biología Tropical, vol. 67, no. 5, 2019, pp. 39-50 Universidad de Costa Rica DOI: DOI 10.15517/RBT.V67IS5.38924 Available in: http://www.redalyc.org/articulo.oa?id=44965909003 How to cite Complete issue Scientific Information System Redalyc More information about this article Network of Scientific Journals from Latin America and the Caribbean, Spain and Journal's webpage in redalyc.org Portugal Project academic non-profit, developed under the open access initiative DOI 10.15517/RBT.V67IS5.38924 Artículo Chaetopterus antarcticus (Polychaeta: Chaetopteridae) in Argentinian shelf scallop beds: from infaunal to epifaunal life habits Chaetopterus antarcticus (Chaetopteridae) en bancos de vieiras del Atlántico SO: de hábito de vida infaunal a epifaunal Claudia S. Bremec1 Laura Schejter1, 2 1. Instituto de Investigaciones Marinas y Costeras, Consejo Nacional de Investigaciones Científicas y Técnicas (IIMyC- CONICET), Argentina; [email protected] 2. Instituto Nacional de Investigación y Desarrollo Pesquero (INIDEP). Paseo Victoria Ocampo N°1, 7600, Mar del Plata, Argentina; [email protected] Received 13-VII-2018 Corrected 18-V-2019 Accepted 30-VI-2019 Abstract Introduction: The shelf-break frontal area in the Argentine Sea, between 37シ S and 40シ S, is characterized by high frequency and abundance of the parchment worm Chaetopterus antarcticus Kinberg, 1866 associated to Zygochlamys patagonica scallop beds. This polychaete was usually collected within its U tubes, typical of infaunal habit. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
Symbiontsms Final
being cryptic. Accordingly, this fauna tends to remain virtually unknown, especially in Scale-worms (Polychaeta, Polynoidae) associated with tropical and deep waters. chaetopterid worms (Polychaeta, Chaetopteridae), with Among marine animals, the class Polychaeta includes one of the highest number description of a new genus and species of symbiotic species, with more than 370 symbionts according to Martin and Britayev (1998). Symbiotic polychaetes are associated with nearly all main taxa of marine metazoans (excluding flatworms, nemerteans and nematodes) and even with protozoans. + *± T. A. BRITAYEV and D. MARTIN However, they clearly prefer organisms providing them with good shelter, such as burrowing or tube-dwelling animals (viz. sipunculids, balanoglossids, tubicolous + A.N. Severtzov Institute of Ecology and Evolution (RAS), Leninsky pr. 33, 117071 Moscow, Russia. polychaetes). The durable and long tubes of chaetopterid worms (Polychaeta, Telephone: +0951247950. Fax: +0959545554. E-mail: [email protected] Chaetopteridae) probably offer one of the most “comfortable” habitats for symbiotic ±* Centre d’Estudis Avançats de Blanes (CSIC), carrer d’accés a la Cala Sant Francesc 14, Blanes (Girona), Catalunya (Spain). Telephone: +34972336101. Fax: +34972337806. E-mail: [email protected] polychaetes (Petersen & Britayev 1997) and shelter at least 17 species of facultative and obligate polychaete species (Martin & Britayev 1998). Three species of scale-worms inhabiting chaetopterid tubes have been found during routine studies During studies of the structure of bottom communities performed by the authors of benthic communities. Anotochaetonoe michelbhaudi gen. et sp. nov. occurred in the E Atlantic along the coasts of Congo (Atlantic Ocean), France (Mediterranean Sea) and Vietnam off Congo in association with Spiochaetopterus sp.