From Tocantins-Araguaia River Basin Based on Integrative Analysis of Molecular and Morphological Data Marcelo C
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Barcoding Piranhas and Pacus: Species Diversity and Morphological Convergence of Reofilic Taxa
ID: 617 Barcoding piranhas and pacus: Species diversity and morphological convergence of reofilic taxa Izeni P. Farias1, Valeria N. Machado1, Rupert A. Collins1,2, Rafaela P. Ota3, Marcelo C. Andrade4, Tomas Hrbek1 1Laboratório de Evolução e Genética Animal, Departamento de Genética, Universidade Federal do Amazonas (UFAM), Manaus, AM, Brazil 2School of Biological Sciences, Life Sciences Building, University of Bristol, UK 3Programa de Pós-Graduação em Biologia de Água Doce e Pesca Interior, Instituto Nacional de Pesquisas da Amazônia (INPA), Manaus, AM, Brazil 4Programa de Pós-Graduação em Ecologia Aquática e Pesca, Instituto de Ciências Biológicas, Universidade Federal do Pará (UFPA), Belém, Pará, Brazil Piranhas and pacus (Characiformes: Serrasalmidae) are a charismatic but understudied family of Neotropical fishes. Here, we analyse a DNA barcode dataset comprising 1,122 specimens, 69 species, 16 genera, 208 localities and 34 major river drainages, in order to make an inventory of diversity and to highlight taxa and biogeographic areas worthy of further sampling effort and conservation protection. Using four methods of species delimitation, we report between 76 and 99 species-like clusters, i.e. between 20% and 33% of a priori identified species were represented by more than one mtDNA lineage. There was a high degree of congruence between clusters, with 60% supported by three or four methods. Pacus of the genus Myloplus exhibited the most intraspecific diversity, with six of the 13 species sampled found to have multiple lineages. Conversely, piranhas of the Serrasalmus rhombeus group proved difficult to delimit with these methods. Overall, our results recognize substantially underestimated diversity in the serrasalmids, and emphasizes the Guiana and Brazilian Shield rivers as biogeographically important areas with multiple cases of across-shield and within-shield diversifications. -
(Characiformes, Serrasalmidae) from the Rio Madeira Basin, Brazil
A peer-reviewed open-access journal ZooKeys 571: 153–167Myloplus (2016) zorroi, a new serrasalmid species from Madeira river basin... 153 doi: 10.3897/zookeys.571.5983 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research A new large species of Myloplus (Characiformes, Serrasalmidae) from the Rio Madeira basin, Brazil Marcelo C. Andrade1,2, Michel Jégu3, Tommaso Giarrizzo1,2,4 1 Universidade Federal do Pará, Cidade Universitária Prof. José Silveira Netto. Laboratório de Biologia Pe- squeira e Manejo dos Recursos Aquáticos, Grupo de Ecologia Aquática. Avenida Perimetral, 2651, Terra Firme, 66077830. Belém, PA, Brazil 2 Programa de Pós-Graduação em Ecologia Aquática e Pesca. Universidade Fe- deral do Pará, Instituto de Ciências Biológicas. Cidade Universitária Prof. José Silveira Netto. Avenida Augusto Corrêa, 1, Guamá, 66075110. Belém, PA, Brazil 3 Institut de Recherche pour le Développement, Biologie des Organismes et Ecosystèmes Aquatiques, UMR BOREA, Laboratoire d´Icthyologie, Muséum national d’Histoire naturelle, MNHN, CP26, 43 rue Cuvier, 75231 Paris Cedex 05, France 4 Programa de Pós-Graduação em Biodiversidade e Conservação. Universidade Federal do Pará, Faculdade de Ciências Biológicas. Avenida Cel. José Porfírio, 2515, São Sebastião, 68372010. Altamira, PA, Brazil Corresponding author: Marcelo C. Andrade ([email protected]) Academic editor: C. Baldwin | Received 7 March 2015 | Accepted 19 January 2016 | Published 7 March 2016 http://zoobank.org/A5ABAD5A-7F31-46FB-A731-9A60A4AA9B83 Citation: Andrade MC, Jégu M, Giarrizzo T (2016) A new large species of Myloplus (Characiformes, Serrasalmidae) from the Rio Madeira basin, Brazil. ZooKeys 571: 153–167. doi: 10.3897/zookeys.571.5983 Abstract Myloplus zorroi sp. n. -
(Characiformes: Serrasalmidae: Myloplus) from the Brazilian Amazon
Neotropical Ichthyology Original article https://doi.org/10.1590/1982-0224-20190112 urn:lsid:zoobank.org:pub:D73103DD-29FA-4B78-89AE-91FA718A1001 Integrative taxonomy reveals a new species of pacu (Characiformes: Serrasalmidae: Myloplus) from the Brazilian Amazon Rafaela Priscila Ota1, Valéria Nogueira Machado2, Correspondence: Marcelo C. Andrade3, Rupert A. Collins4, Izeni Pires Farias2 Rafaela Priscila Ota 2 [email protected] and Tomas Hrbek Pacus of the genus Myloplus represent a formidable taxonomic challenge, and particularly so for the case of M. asterias and M. rubripinnis, two widespread and common species that harbor considerable morphological diversity. Here we apply DNA barcoding and multiple species discovery methods to find candidate species in this complex group. We report on one well-supported lineage that is also morphologically and ecologically distinct. This lineage represents a new species that can be distinguished from congeners by the presence of dark chromatophores on lateral-line scales, which gives the appearance of a black lateral line. It can be further diagnosed by having 25–29 branched dorsal-fin rays (vs. 18–24), 89–114 perforated scales from the supracleithrum to the end of hypural plate (vs. 56–89), and 98–120 total lateral line scales (vs. 59–97). The new species is widely distributed in the Amazon basin, but seems to have a preference for black- and clearwater habitats. This ecological preference and black lateral line color pattern bears a striking similarity to the recently described silver dollar Submitted September 24, 2019 Metynnis melanogrammus. Accepted February 13, 2020 by George Mattox Keywords: COI gene, Cryptic species, Myloplus asterias, Myloplus rubripinnis, Published April 20, 2020 Neotropical. -
Vulnerability of the Biota in Riverine and Seasonally Flooded Habitats to Damming of Amazonian Rivers
Received: 11 December 2019 Revised: 8 April 2020 Accepted: 5 June 2020 DOI: 10.1002/aqc.3424 SPECIAL ISSUE ARTICLE Vulnerability of the biota in riverine and seasonally flooded habitats to damming of Amazonian rivers Edgardo M. Latrubesse1 | Fernando M. d'Horta2 | Camila C. Ribas2 | Florian Wittmann3 | Jansen Zuanon2 | Edward Park4 | Thomas Dunne5 | Eugenio Y. Arima6 | Paul A. Baker7 1Asian School of the Environment and Earth Observatory of Singapore (EOS), Nanyang Abstract Technological University (NTU), Singapore 1. The extent and intensity of impacts of multiple new dams in the Amazon basin on 2 National Institute of Amazonian Research specific biological groups are potentially large, but still uncertain and need to be (INPA), Manaus, Brazil 3Institute of Floodplain Ecology, Karlsruhe better understood. Institute of Technology, Rastatt, Germany 2. It is known that river disruption and regulation by dams may affect sediment sup- 4 National Institute of Education (NIE), plies, river channel migration, floodplain dynamics, and, as a major adverse conse- Nanyang Technological University, Singapore quence, are likely to decrease or even suppress ecological connectivity among 5Bren School of Environmental Science and Management, University of California (UCSB), populations of aquatic organisms and organisms dependent upon seasonally Santa Barbara, California, USA flooded environments. 6Department of Geography and the Environment, University of Texas at Austin, 3. This article complements our previous results by assessing the relationships Austin, Texas, USA between dams, our Dam Environmental Vulnerability Index (DEVI), and the biotic 7 Nicholas School of the Environment, Duke environments threatened by the effects of dams. Because of the cartographic rep- University, Durham, North Carolina, USA resentation of DEVI, it is a useful tool to compare the potential hydrophysical Correspondence impacts of proposed dams in the Amazon basin with the spatial distribution of Edgardo Latrubesse, Asian School of the Environment and Earth Observatory of biological diversity. -
Atendendo Solicitação Do(A) Autor(A), O Texto Completo Desta Tese Será Disponibilizado Somente a Partir De 27/02/2021
RESSALVA Atendendo solicitação do(a) autor(a), o texto completo desta tese será disponibilizado somente a partir de 27/02/2021. UNIVERSIDADE ESTADUAL PAULISTA "JÚLIO DE MESQUITA FILHO" CÂMPUS DE BOTUCATU INSTITUTO DE BIOCIÊNCIAS Programa de Pós-graduação em Ciências Biológicas (Zoologia) NADAYCA THAYANE BONANI MATEUSSI FILOGENÔMICA DE SERRASALMIDAE E ESTUDOS MORFOLÓGICOS E MOLECULARES EM CATOPRION E PYGOCENTRUS (TELEOSTEI: CHARACIFORMES) Botucatu/SP 2019 NADAYCA THAYANE BONANI MATEUSSI FILOGENÔMICA DE SERRASALMIDAE E ESTUDOS MORFOLÓGICOS E MOLECULARES EM CATOPRION E PYGOCENTRUS (TELEOSTEI: CHARACIFORMES) Tese apresentada ao Programa de Pós- Graduação em Ciências Biológicas (Zoologia) do Instituto de Biociências da Universidade Estadual Paulista "Júlio Mesquita Filho" como requisito parcial para obtenção do título de Doutora em Ciências Biológicas (Zoologia). Área de concentração: Biodiversidade Orientador: Dr. Claudio de Oliveira Co-orientador: Dr. Bruno Francelino de Melo Botucatu/SP 2019 FICHA CATALOGRÁFICA ELABORADA PELA SEÇÃO TÉC. AQUIS. TRATAMENTO DA INFORM. DIVISÃO TÉCNICA DE BIBLIOTECA E DOCUMENTAÇÃO - CÂMPUS DE BOTUCATU - UNESP BIBLIOTECÁRIA RESPONSÁVEL: ROSANGELA APARECIDA LOBO-CRB 8/7500 Mateussi, Nadayca Thayane Bonani. Filogenômica de Serrasalmidae e estudos morfológicos e moleculares em Catoprion e Pygocentrus (Teleostei: Characiformes) / Nadayca Thayane Bonani Mateussi. - Botucatu, 2019 Tese (doutorado) - Universidade Estadual Paulista "Júlio de Mesquita Filho", Instituto de Biociências de Botucatu Orientador: Claudio de Oliveira Coorientador: Bruno Francelino de Melo Capes: 20405006 1. Código de Barras de DNA taxonômico. 2. Zoologia - Classificação. 3. Peixes - Identificação. 4. Filogenia. Palavras-chave: DNA barcode; Elementos Ultraconservados; Sistemática; Taxonomia. A todos os professores que tive ao longo desse extenso caminho de apredizagem, da alfabetização à pós-graduação. A dedicação de cada um me trouxe até aqui. -
Hyperspectral Data As a Biodiversity Screening Tool Can Differentiate
www.nature.com/scientificreports OPEN Hyperspectral data as a biodiversity screening tool can diferentiate among diverse Neotropical fshes M. A. Kolmann1,2*, M. Kalacska3, O. Lucanus4, L. Sousa5, D. Wainwright6, J. P. Arroyo‑Mora7 & M. C. Andrade8 Hyperspectral data encode information from electromagnetic radiation (i.e., color) of any object in the form of a spectral signature; these data can then be used to distinguish among materials or even map whole landscapes. Although hyperspectral data have been mostly used to study landscape ecology, foral diversity and many other applications in the natural sciences, we propose that spectral signatures can be used for rapid assessment of faunal biodiversity, akin to DNA barcoding and metabarcoding. We demonstrate that spectral signatures of individual, live fsh specimens can accurately capture species and clade‑level diferences in fsh coloration, specifcally among piranhas and pacus (Family Serrasalmidae), fshes with a long history of taxonomic confusion. We analyzed 47 serrasalmid species and could distinguish spectra among diferent species and clades, with the method sensitive enough to document changes in fsh coloration over ontogeny. Herbivorous pacu spectra were more like one another than they were to piranhas; however, our method also documented interspecifc variation in pacus that corresponds to cryptic lineages. While spectra do not serve as an alternative to the collection of curated specimens, hyperspectral data of fshes in the feld should help clarify which specimens might be unique or undescribed, complementing existing molecular and morphological techniques. Te biological sciences face two dire and disturbing issues: (1) increases in extinctions of animals across all con- tinents and oceans1–4, as well as (2) a shrinking pool of taxonomists trained to identify these organisms 5–7. -
A Rapid Biological Assessment of the Upper Palumeu River Watershed (Grensgebergte and Kasikasima) of Southeastern Suriname
Rapid Assessment Program A Rapid Biological Assessment of the Upper Palumeu River Watershed (Grensgebergte and Kasikasima) of Southeastern Suriname Editors: Leeanne E. Alonso and Trond H. Larsen 67 CONSERVATION INTERNATIONAL - SURINAME CONSERVATION INTERNATIONAL GLOBAL WILDLIFE CONSERVATION ANTON DE KOM UNIVERSITY OF SURINAME THE SURINAME FOREST SERVICE (LBB) NATURE CONSERVATION DIVISION (NB) FOUNDATION FOR FOREST MANAGEMENT AND PRODUCTION CONTROL (SBB) SURINAME CONSERVATION FOUNDATION THE HARBERS FAMILY FOUNDATION Rapid Assessment Program A Rapid Biological Assessment of the Upper Palumeu River Watershed RAP (Grensgebergte and Kasikasima) of Southeastern Suriname Bulletin of Biological Assessment 67 Editors: Leeanne E. Alonso and Trond H. Larsen CONSERVATION INTERNATIONAL - SURINAME CONSERVATION INTERNATIONAL GLOBAL WILDLIFE CONSERVATION ANTON DE KOM UNIVERSITY OF SURINAME THE SURINAME FOREST SERVICE (LBB) NATURE CONSERVATION DIVISION (NB) FOUNDATION FOR FOREST MANAGEMENT AND PRODUCTION CONTROL (SBB) SURINAME CONSERVATION FOUNDATION THE HARBERS FAMILY FOUNDATION The RAP Bulletin of Biological Assessment is published by: Conservation International 2011 Crystal Drive, Suite 500 Arlington, VA USA 22202 Tel : +1 703-341-2400 www.conservation.org Cover photos: The RAP team surveyed the Grensgebergte Mountains and Upper Palumeu Watershed, as well as the Middle Palumeu River and Kasikasima Mountains visible here. Freshwater resources originating here are vital for all of Suriname. (T. Larsen) Glass frogs (Hyalinobatrachium cf. taylori) lay their -
Tese Vivian Nunes Gomes Pós Defesa
UNIVERSIDADE ESTADUAL DE MARINGÁ CENTRO DE CIÊNCIAS BIOLÓGICAS DEPARTAMENTO DE BIOLOGIA PROGRAMA DE PÓS-GRADUAÇÃO EM ECOLOGIA DE AMBIENTES AQUÁTICOS CONTINENTAIS VIVIAN NUNES GOMES Revisão taxonômica de Myleus Müller & Troschel, 1844 e Myloplus Gill, 1896 (Characiformes, Serrasalmidae) Maringá 2015 VIVIAN NUNES GOMES Revisão taxonômica de Myleus Müller & Troschel, 1844 e Myloplus Gill, 1896 (Characiformes, Serrasalmidae) Tese apresentada ao Programa de Pós-Graduação em Ecologia de Ambientes Aquáticos Continentais do Departamento de Biologia, Centro de Ciências Biológicas da Universidade Estadual de Maringá, como requisito parcial para obtenção do título de Doutor em Ciências Ambientais. Área de concentração: Ciências Ambientais Orientadora: Dr.ª Carla Simone Pavanelli Maringá 2015 "Dados Internacionais de Catalogação-na-Publicação (CIP)" (Biblioteca Setorial - UEM. Nupélia, Maringá, PR, Brasil) Gomes, Vivian Nunes, 1986- G633r Revisão taxonômica de Myleus Müller & Troschel, 1844 e Myloplus Gill, 1896 (Characiformes, Serrasalmidae) / Vivian Nunes Gomes.-- Maringá, 2015. 123 f. : il. (algumas color.). Tese (doutorado em Ecologia de Ambientes Aquáticos Continentais)--Universidade Estadual de Maringá, Dep. de Biologia, 2015. Orientadora: Dr.ª Carla Simone Pavanelli. 1. Myleus Müller & Troschel, 1844 (Characiformes, Serrasalmidae) “pacu” - Revisão taxonômica. 2. Myloplus Gill, 1896 (Characiformes, Serrasalmidae) “pacu” - Revisão taxonômica. 3. Peixes de água doce – Serrasalmidae (pacu) - Revisão taxonômica. I. Universidade Estadual de Maringá. -
Advances in Fish Biology Symposium,” We Are Including 48 Oral and Poster Papers on a Diverse Range of Species, Covering a Number of Topics
Advances in Fish Biology SYMPOSIUM PROCEEDINGS Adalberto Val Don MacKinlay International Congress on the Biology of Fish Tropical Hotel Resort, Manaus Brazil, August 1-5, 2004 Copyright © 2004 Physiology Section, American Fisheries Society All rights reserved International Standard Book Number(ISBN) 1-894337-44-1 Notice This publication is made up of a combination of extended abstracts and full papers, submitted by the authors without peer review. The formatting has been edited but the content is the responsibility of the authors. The papers in this volume should not be cited as primary literature. The Physiology Section of the American Fisheries Society offers this compilation of papers in the interests of information exchange only, and makes no claim as to the validity of the conclusions or recommendations presented in the papers. For copies of these Symposium Proceedings, or the other 20 Proceedings in the Congress series, contact: Don MacKinlay, SEP DFO, 401 Burrard St Vancouver BC V6C 3S4 Canada Phone: 604-666-3520 Fax 604-666-0417 E-mail: [email protected] Website: www.fishbiologycongress.org ii PREFACE Fish are so important in our lives that they have been used in thousands of different laboratories worldwide to understand and protect our environment; to understand and ascertain the foundation of vertebrate evolution; to understand and recount the history of vertebrate colonization of isolated pristine environments; and to understand the adaptive mechanisms to extreme environmental conditions. More importantly, fish are one of the most important sources of protein for the human kind. Efforts at all levels have been made to increase fish production and, undoubtedly, the biology of fish, especially the biology of unknown species, has much to contribute. -
Zootaxa,Molecular Systematics of Serrasalmidae
Zootaxa 1484: 1–38 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Molecular systematics of Serrasalmidae: Deciphering the identities of piranha species and unraveling their evolutionary histories BARBIE FREEMAN1, LEO G. NICO2, MATTHEW OSENTOSKI1, HOWARD L. JELKS2 & TIMOTHY M. COLLINS1,3 1Dept. of Biological Sciences, Florida International University, University Park, Miami, FL 33199, USA. 2United States Geological Survey, 7920 NW 71st St., Gainesville, FL 32653, USA. E-mail: [email protected] 3Corresponding author. E-mail: [email protected] Table of contents Abstract ...............................................................................................................................................................................1 Introduction ......................................................................................................................................................................... 2 Overview of piranha diversity and systematics .................................................................................................................. 3 Material and methods........................................................................................................................................................ 10 Results............................................................................................................................................................................... 16 Discussion -
Reproductive Characteristics of Characid Fish Species (Teleostei
Reproductive characteristics of characid fish species (Teleostei... 469 Reproductive characteristics of characid fish species (Teleostei, Characiformes) and their relationship with body size and phylogeny Marco A. Azevedo Setor de Ictiologia, Museu de Ciências Naturais, Fundação Zoobotânica do Rio Grande do Sul, Rua Dr. Salvador França, 1427, 90690-000 Porto Alegre, RS, Brazil. ([email protected]) ABSTRACT. In this study, I investigated the reproductive biology of fish species from the family Characidae of the order Characiformes. I also investigated the relationship between reproductive biology and body weight and interpreted this relationship in a phylogenetic context. The results of the present study contribute to the understanding of the evolution of the reproductive strategies present in the species of this family. Most larger characid species and other characiforms exhibit a reproductive pattern that is generally characterized by a short seasonal reproductive period that lasts one to three months, between September and April. This is accompanied by total spawning, an extremely high fecundity, and, in many species, a reproductive migration. Many species with lower fecundity exhibit some form of parental care. Although reduction in body size may represent an adaptive advantage, it may also require evolutionary responses to new biological problems that arise. In terms of reproduction, smaller species have a tendency to reduce the number of oocytes that they produce. Many small characids have a reproductive pattern similar to that of larger characiforms. On the other hand they may also exhibit a range of modifications that possibly relate to the decrease in body size and the consequent reduction in fecundity. -
Characiformes: Serrasalmidae) from the Serra Dos Parecis, Tapajós Drainage
Neotropical Ichthyology, 12(2): 397-402, 2014 Copyright © 2014 Sociedade Brasileira de Ictiologia DOI: 10.1590/1982-0224-20130137 A new species of Utiaritichthys Miranda Ribeiro (Characiformes: Serrasalmidae) from the Serra dos Parecis, Tapajós drainage Thiago N. A. Pereira and Ricardo M. C. Castro Utiaritichthys esguiceroi is described from the upper portion of the rio Juruena, rio Tapajós drainage, Mato Grosso State, Central Brazil. The new species distinguished from its two congeners, U. sennaebragai Miranda Ribeiro and U. longidorsalis Jégu, Tito de Morais & Santos, by having 99 to 101 perforated scales on lateral line (vs. 69 to 83), presence of 17 to19 prepelvic spines (vs. 9-13 in U. sennaebragai and 28-31 in U. longidorsalis), 20 to 21 postpelvic spines (vs. 15 to 19 in U. sennaebragai, and 14 in U. longidorsalis), and 23 to 25 circumpeduncular scales (vs. 30-48 in U. sennaebragai, and 33-35 in U. longidorsalis). Furthermore, the new species differs from U. longidorsalis by having larger interdorsal width, and adipose-fin base length (11.8-15.6 vs. 7.1-7.9% of SL, and 4.2-5.8 vs. 3.7-3.8% of SL, respectively). Utiaritichthys esguiceroi é descrita da porção superior do rio Juruena, bacia do rio Tapajós, estado do Mato Grosso, Brasil Central. A espécie nova diferencia-se de suas congêneres, U. sennaebragai Miranda Ribeiro e U. longidorsalis Jégu, Tito de Morais & Santos, pela presença de 99 a 101 escamas perfuradas na linha lateral (vs. 69 a 83), presença de 17 a 19 espinhos pré- pélvicos (vs. 9-13 em U.