Morphological and Cytochemical Studies of Fertilization of Palmaria Sp
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Xylans of Red and Green Algae: What Is Known About Their Structures and How They Are Synthesised?
polymers Review Xylans of Red and Green Algae: What Is Known about Their Structures and How They Are Synthesised? Yves S.Y. Hsieh 1,* and Philip J. Harris 2,* 1 Division of Glycoscience, Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, Royal Institute of Technology (KTH), AlbaNova University Centre, SE-106 91 Stockholm, Sweden 2 School of Biological Science, The University of Auckland, Private Bag 92019, Auckland, New Zealand * Correspondence: [email protected] (Y.S.Y.H.); [email protected] (P.J.H.); Tel.: +46-8-790-9937 (Y.S.Y.H.); +64-9-923-8366 (P.J.H.) Received: 30 January 2019; Accepted: 17 February 2019; Published: 18 February 2019 Abstract: Xylans with a variety of structures have been characterised in green algae, including chlorophytes (Chlorophyta) and charophytes (in the Streptophyta), and red algae (Rhodophyta). Substituted 1,4-β-D-xylans, similar to those in land plants (embryophytes), occur in the cell wall matrix of advanced orders of charophyte green algae. Small proportions of 1,4-β-D-xylans have also been found in the cell walls of some chlorophyte green algae and red algae but have not been well characterised. 1,3-β-D-Xylans occur as triple helices in microfibrils in the cell walls of chlorophyte algae in the order Bryopsidales and of red algae in the order Bangiales. 1,3;1,4-β-D-Xylans occur in the cell wall matrix of red algae in the orders Palmariales and Nemaliales. In the angiosperm Arabidopsis thaliana, the gene IRX10 encodes a xylan 1,4-β-D-xylosyltranferase (xylan synthase), and, when heterologously expressed, this protein catalysed the production of the backbone of 1,4-β-D-xylans. -
Chemical Composition and Potential Practical Application of 15 Red Algal Species from the White Sea Coast (The Arctic Ocean)
molecules Article Chemical Composition and Potential Practical Application of 15 Red Algal Species from the White Sea Coast (the Arctic Ocean) Nikolay Yanshin 1, Aleksandra Kushnareva 2, Valeriia Lemesheva 1, Claudia Birkemeyer 3 and Elena Tarakhovskaya 1,4,* 1 Department of Plant Physiology and Biochemistry, Faculty of Biology, St. Petersburg State University, 199034 St. Petersburg, Russia; [email protected] (N.Y.); [email protected] (V.L.) 2 N. I. Vavilov Research Institute of Plant Industry, 190000 St. Petersburg, Russia; [email protected] 3 Faculty of Chemistry and Mineralogy, University of Leipzig, 04103 Leipzig, Germany; [email protected] 4 Vavilov Institute of General Genetics RAS, St. Petersburg Branch, 199034 St. Petersburg, Russia * Correspondence: [email protected] Abstract: Though numerous valuable compounds from red algae already experience high demand in medicine, nutrition, and different branches of industry, these organisms are still recognized as an underexploited resource. This study provides a comprehensive characterization of the chemical composition of 15 Arctic red algal species from the perspective of their practical relevance in medicine and the food industry. We show that several virtually unstudied species may be regarded as promis- ing sources of different valuable metabolites and minerals. Thus, several filamentous ceramialean algae (Ceramium virgatum, Polysiphonia stricta, Savoiea arctica) had total protein content of 20–32% of dry weight, which is comparable to or higher than that of already commercially exploited species Citation: Yanshin, N.; Kushnareva, (Palmaria palmata, Porphyra sp.). Moreover, ceramialean algae contained high amounts of pigments, A.; Lemesheva, V.; Birkemeyer, C.; macronutrients, and ascorbic acid. Euthora cristata (Gigartinales) accumulated free essential amino Tarakhovskaya, E. -
CH28 PROTISTS.Pptx
9/29/14 Biosc 41 Announcements 9/29 Review: History of Life v Quick review followed by lecture quiz (history & v How long ago is Earth thought to have formed? phylogeny) v What is thought to have been the first genetic material? v Lecture: Protists v Are we tetrapods? v Lab: Protozoa (animal-like protists) v Most atmospheric oxygen comes from photosynthesis v Lab exam 1 is Wed! (does not cover today’s lab) § Since many of the first organisms were photosynthetic (i.e. cyanobacteria), a LOT of excess oxygen accumulated (O2 revolution) § Some organisms adapted to use it (aerobic respiration) Review: History of Life Review: Phylogeny v Which organelles are thought to have originated as v Homology is similarity due to shared ancestry endosymbionts? v Analogy is similarity due to convergent evolution v During what event did fossils resembling modern taxa suddenly appear en masse? v A valid clade is monophyletic, meaning it consists of the ancestor taxon and all its descendants v How many mass extinctions seem to have occurred during v A paraphyletic grouping consists of an ancestral species and Earth’s history? Describe one? some, but not all, of the descendants v When is adaptive radiation likely to occur? v A polyphyletic grouping includes distantly related species but does not include their most recent common ancestor v Maximum parsimony assumes the tree requiring the fewest evolutionary events is most likely Quiz 3 (History and Phylogeny) BIOSC 041 1. How long ago is Earth thought to have formed? 2. Why might many organisms have evolved to use aerobic respiration? PROTISTS! Reference: Chapter 28 3. -
Palmaria Palmata
Downloaded from orbit.dtu.dk on: Sep 23, 2021 Investigating hatchery and cultivation methods for improved cultivation of Palmaria palmata Schmedes, Peter Søndergaard Publication date: 2020 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Schmedes, P. S. (2020). Investigating hatchery and cultivation methods for improved cultivation of Palmaria palmata. DTU Aqua. General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. DTU Aqua National Institute of Aquatic Resources Investigating hatchery and cultivation methods for improved cultivation of Palmaria palmata Peter Søndergaard Schmedes PhD thesis, April 2020 ,QYHVWLJDWLQJPHWKRGVIRU LPSURYHGKDWFKHU\DQGFXOWLYDWLRQ RIPalmaria palmata 3HWHU6¡QGHUJDDUG6FKPHGHV 3K'WKHVLV $SULO 1 ĂƚĂƐŚĞĞƚ dŝƚůĞ͗ /ŶǀĞƐƚŝŐĂƚŝŶŐ ŵĞƚŚŽĚƐ ĨŽƌ ŝŵƉƌŽǀĞĚ ŚĂƚĐŚĞƌLJ -
Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites
University of Rhode Island DigitalCommons@URI Open Access Dissertations 2017 Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites Eric Salomaki University of Rhode Island, [email protected] Follow this and additional works at: https://digitalcommons.uri.edu/oa_diss Recommended Citation Salomaki, Eric, "Organellar Genome Evolution in Red Algal Parasites: Differences in Adelpho- and Alloparasites" (2017). Open Access Dissertations. Paper 614. https://digitalcommons.uri.edu/oa_diss/614 This Dissertation is brought to you for free and open access by DigitalCommons@URI. It has been accepted for inclusion in Open Access Dissertations by an authorized administrator of DigitalCommons@URI. For more information, please contact [email protected]. ORGANELLAR GENOME EVOLUTION IN RED ALGAL PARASITES: DIFFERENCES IN ADELPHO- AND ALLOPARASITES BY ERIC SALOMAKI A DISSERTATION SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN BIOLOGICAL SCIENCES UNIVERSITY OF RHODE ISLAND 2017 DOCTOR OF PHILOSOPHY DISSERTATION OF ERIC SALOMAKI APPROVED: Dissertation Committee: Major Professor Christopher E. Lane Jason Kolbe Tatiana Rynearson Nasser H. Zawia DEAN OF THE GRADUATE SCHOOL UNIVERSITY OF RHODE ISLAND 2017 ABSTRACT Parasitism is a common life strategy throughout the eukaryotic tree of life. Many devastating human pathogens, including the causative agents of malaria and toxoplasmosis, have evolved from a photosynthetic ancestor. However, how an organism transitions from a photosynthetic to a parasitic life history strategy remains mostly unknown. Parasites have independently evolved dozens of times throughout the Florideophyceae (Rhodophyta), and often infect close relatives. This framework enables direct comparisons between autotrophs and parasites to investigate the early stages of parasite evolution. -
Characterization of an Actin Gene Family in Palmaria Palmata and Porphyra Purpurea (Rhodophyta)
Cah. Biol. Mar. (2005) 46 : 311-322 Characterization of an actin gene family in Palmaria palmata and Porphyra purpurea (Rhodophyta) Line LE GALL1, Christophe LELONG, Anne-Marie RUSIG and Pascal FAVREL Laboratoire de Biologie et Biotechnologies Marines, Université de Caen – Basse Normandie UMR 100 Physiologie et Ecophysiologie des Mollusques Marins I.FR.E.MER Esplanade de la Paix, 14032 Caen Cedex, France (1) To whom correspondence should be addressed: CEMAR, Dept of Biology, Mail Service # 45111, University of New Brunswick, Fredericton, NB, E3B 6E1, CANADA Fax: 1 506 453 35 83, Tél: 1 506 453 35 37. E-mail: [email protected] Abstract: The actin gene family was investigated in Palmaria palmata and Porphyra purpurea, two members of the Rhodoplantae. Respectively four and two partial actin gene sequences were isolated from P. purpurea and P. palmata by PCR using actin primers deduced from the conserved regions of many classes of organisms. In P. purpurea, the partial actin gene puract1, puract2 and puract3 were shown to code for proteins whereas puract4 is a pseudogene. This result confirms the presence of several actin genes already suspected in the genus Porphyra. In P. palmata, palmact1 presents a greater identity with actin sequences from other red algae than palmact2, the second gene characterized in this species. Sequencing of the gene palmact1 revealed the existence of an intron in the coding region. To our knowledge this is the first time that two actin encoding genes have been observed in a member of the Florideophyceae. The two genes were both expressed in tetrasporophytic fronds, which raises the question as to their function. -
A Genetic Investigation of Two Morphotypes of Palmaria Palmata (Palmariales,Rhodophyceae) Using Rubisco Spacer and ITS 1 and ITS 2 Sequences
Cryptogamie,Algol.,2006,27 (1):17-30 ©2006 Adac.Tous droits réservés A genetic investigation of two morphotypes of Palmaria palmata (Palmariales,Rhodophyceae) using Rubisco spacer and ITS 1 and ITS 2 sequences Stefan KRAAN* &Michael D.GUIRY Irish Seaweed Centre,Martin Ryan Institute,National University of Ireland, Galway,Republic of Ireland. (Received 4 February 2005,Accepted 23 September 2005) Abstract —Numerous varieties and formae have been described of Palmaria palmata (Linnaeus) O.Kuntze (Palmariales,Rhodophyceae),which is essentially a morphologically plastic entity.The most striking of these is the sarniensis-sobolifera varietal complex.Four isolates of this complex and nine of the type variety were genetically compared using plastid-encoded Rubisco spacer sequences and the Internal Transcribed Spacer (ITS 1 and 2) sequences of the nuclear ribosomal cistron. Analysis of the Rubisco spacer sequences resulted in one phylogenetically informative site (excluding the out-group). Phylogenies inferred from the ITS 1 and 2 showed the European isolates separating from a single east Canadian isolate,but did not resolve monophyly of any of the two morphotypes.The average of the Jukes-Cantor distances fell within the range found for conspecific samples of other palmarialean algae and,therefore,we conclude that the type and entities from the sarniensis-sobolifera complex are phylogenetically indistinguishable with respect to the DNA examined. We therefore propose that the use of a varietal designation for the sarniensis-sobolifera and palmata complex be discontinued. Hybrids / ITS 1 and 2 / morphotypes / Palmaria palmata / phylogenetics / Rubisco spacer / sarniensis-sobolifera Résumé — Etude génétique de deux morphotypes de Palmaria palmata (Palmariales, Rhodophyceae) utilisant les séquences de l’espaceur de la Rubisco et des ITS1 et 2. -
Population Ecology of Palmaria Palmata (Palmariales, Rhodophyta) from Harvested and Non-Harvested Shores on Digby Neck, Nova Scotia, Canada
Research Article Algae 2012, 27(1): 33-42 http://dx.doi.org/10.4490/algae.2012.27.1.033 Open Access Population ecology of Palmaria palmata (Palmariales, Rhodophyta) from harvested and non-harvested shores on Digby Neck, Nova Scotia, Canada David J. Garbary1,*, Leah F. Beveridge1, Andrea D. Flynn1 and Katelyn L. White1 1Department of Biology, St. Francis Xavier University, Antigonish, NS B2G 2W5, Canada Population ecology of Palmaria palmata is described from the intertidal zone of Digby Neck and adjacent islands of Nova Scotia. The primary objectives were: to evaluate the difference in habitat specialization and population structure of P. palmata between harvest and non-harvest shores, and to characterize differences in thallus structure and frond sizes between epilithic and epiphytic populations. Harvest shores were gently sloping boulder fields with boulders typically about 0.5-1.0 m with dense cover of P. palmata on many of the rocks. Non-harvest shores (with or without P. palmata) consisted of boulders that were smaller or larger than harvest shores, or bedrock; when P. palmata was present on non- harvest sites it was typically epiphytic on other algae (e.g., Fucus spp., Mastocarpus stellatus, Devaleraea ramentacea). Harvestable epiphytic populations occurred only in high current areas. While there was little difference in average cover of P. palmata harvest and non-harvest shores (31.2 ± 13.7% vs. 19.4 ± 7.3%, mean ± standard deviation [SD]), the cover of P. palmata on harvest shores was highly skewed such that individual boulders often had >90% cover while adjacent rocks had little. Frond length of large fronds was greater on harvested shores, and mean frond density (g m-2) was three times higher than the mean density on the non-harvested shores. -
"Red Algae". In: Encyclopedia of Life Sciences (ELS)
Red Algae Introductory article Article Contents Carlos Frederico Deluqui Gurgel, Smithsonian Marine Station, Fort Pierce, . Florida, USA Introduction: Definition and Characterization . Sexual Reproduction University of Alabama, Tuscaloosa, Alabama, USA Juan Lopez-Bautista, . Vegetative Reproduction . Major Groups Red algae are ancient aquatic plants with simple organization, noteworthy colour . Ecological Importance variation, vast morphological plasticity, challenging taxonomy and most extant species . Economical Importance (about 6000 worldwide) are marine. They include species with complex life cycles, significant ecological importance and extensive economical applications. doi: 10.1002/9780470015902.a0000335 Introduction: Definition and carrageenan. Some taxa present calcium carbonate depos- Characterization its whose crystal state can be found in two forms, either calcite or aragonite. See also: Algal Calcification and Red algae (Rhodophyta) are a widespread group of uni- to Silification; Algal Cell Walls multicellular aquatic photoautotrophic plants. They ex- Red algae are one of the oldest eukaryotic groups in the hibit a broad range of morphologies, simple anatomy and world, with fossil evidence dating back from the late Pre- display a wide array of life cycles. About 98% of the species Cambrian, about 2 billion years ago (Tappan, 1976). The are marine, 2% freshwater and a few rare terrestrial/sub- oldest multicellular eukaryotic fossil record is of a red alga aerial representatives. Planktonic unicellular species have dated 1.8 billion years ago. We also know that red algae simple life cycles characterized by regular binary cell divi- share a single common ancestor with green algae (Chloro- sion. Advanced macroscopic species exhibit the character- phyta) and the land plants (Embryophyta), and these three istic trichogamy, triphasic, haplo-diplobiontic life cycle, groups, together with the Glaucophytes define the current with one haploid (gametophytic) and two diploid (carp- Plant Kingdom (Keeling, 2004). -
Chapter 2828 Protists
ChapterChapter 2828 Protists PowerPoint® Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Overview: Living Small • Even a low-power microscope can reveal a great variety of organisms in a drop of pond water • Protist is the informal name of the kingdom of mostly unicellular eukaryotes • Advances in eukaryotic systematics have caused the classification of protists to change significantly • Protists constitute a paraphyletic group, and Protista is no longer valid as a kingdom Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 28-01 1 µm Concept 28.1: Most eukaryotes are single-celled organisms • Protists are eukaryotes and thus have organelles and are more complex than prokaryotes • Most protists are unicellular, but there are some colonial and multicellular species Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Structural and Functional Diversity in Protists • Protists exhibit more structural and functional diversity than any other group of eukaryotes • Single-celled protists can be very complex, as all biological functions are carried out by organelles in each individual cell Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings • Protists, the most nutritionally diverse of all eukaryotes, include: – Photoautotrophs, which contain chloroplasts – -
Gracilaria Culture Handbook for New England Charles Yarish University of Connecticut - Stamford, [email protected]
University of Connecticut OpenCommons@UConn Wrack Lines University of Connecticut Sea Grant October 2012 Gracilaria Culture Handbook for New England Charles Yarish University of Connecticut - Stamford, [email protected] Sarah Redmond University of Connecticut - Stamford, [email protected] Jang K. Kim University of Connecticut - Stamford, [email protected] Follow this and additional works at: https://opencommons.uconn.edu/wracklines Recommended Citation Yarish, Charles; Redmond, Sarah; and Kim, Jang K., "Gracilaria Culture Handbook for New England" (2012). Wrack Lines. 72. https://opencommons.uconn.edu/wracklines/72 New England Gracilaria Culture Handbook System Implementation & Operation For Production of Young Plants Project Title: Seaweed Aquaculture for Bioextraction of Nutrients from LIS and Bronx River Estuary (Project # 24266**) Date: Oct. 12, 2012 Sarah Redmond, Jang K. Kim, Charles Yarish* University of Connecticut (*[email protected], 203-251-8432) **Long Island Sound Futures Fund (LISFF) and The National Fish & Wildlife Foundation Award Notification (Project # 24266) 1 This project was funded by the Long Island Sound Futures Fund (National Fish and Wildlife Foundation), under project title “Bioextraction of Nutrients from Long Island Sound” (1/3/2011- 4/2/2012) to Dr. Charles Yarish, University of Connecticut. Additional support was provided by the Connecticut Sea Grant College Program (Project Number R/A-38), under the title, “Development of Seaweed Culture System Technologies to Support Integrated Multi-trophic Aquaculture and Sea Vegetable Aquaculture in New England Coastal Waters” (2/1/2010- 1/31/2013). The principal investigator wishes to thank his co-PIs including Dr. George P. Kraemer (Purchase College, Purchase College), Mr. John Curtis (Bridgeport Regional Aquaculture and Science Technology School in Bridgeport, CT and to his UConn seaweed research team including Sarah Redmond and Dr. -
Dumfries & Galloway Local Biodiversity Action Plan
Dumfries & Galloway Local Biodiversity Action Plan Written and edited by Peter Norman, Biodiversity Officer, with contributions from David Hawker (Flowering Plants Species Statement), Nic Coombey (Geodiversity & Traditional Orchards) and Clair McFarlan (Traditional Orchards). Designed by Paul McLaughlin, Dumfries and Galloway Council Printed by Alba Printers Published by Dumfries & Galloway Biodiversity Partnership, April 2009 Production of this LBAP has been made possible through funding by Acknowledgements Thank-you to all members of the Dumfries & Galloway Biodiversity Partnership Steering Group and Habitat Working Groups, especially Chris Miles of SNH, Alastair McNeill of SEPA, Chris Rollie of RSPB and Sue Bennett of DGC. Thanks also to Liz Holden for invaluable assistance with all things fungal and Andy Acton for advice on lichens. Numerous publications were consulted during preparation of this plan but in the interests of brevity and readibility individual comments are not referenced. Galloway and the Borders by the late Derek Ratcliffe and The Flora of Kirkcudbrightshire by the late Olga Stewart were particularly useful sources of information. Valuable discussions/comments also received from David Hawker, Jim McCleary, Richard Mearns, Anna White and the Dumfries & Galloway Eco-Schools Steering Group. Assistance with proof-reading from Stuart Graham, Chris Miles, Fiona Moran, Mark Pollitt and Chris Rollie. Photographs Thank-you to all photographers who allowed free use of several images for this document: Greg Baillie, Gavin Chambers, Gordon McCall, Maggi Kaye, Paul McLaughlin, Richard Mearns and Pete Robinson. Other photographs were provided by the editor and partners. All images are individually credited. Additional photography: Laurie Campbell www.lauriecampbell.com, Paul Naylor www.marinephoto.org.uk, Steven Round www.stevenround-birdphotography.com, John Bridges www.northeastwildlife.co.uk .