Community-Led Marine Biodiversity Monitoring Handbook 2020
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Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia Viridis and Transcriptome Wide Identification of Cnidarian Homologues
G C A T T A C G G C A T genes Article Characterization of Translationally Controlled Tumour Protein from the Sea Anemone Anemonia viridis and Transcriptome Wide Identification of Cnidarian Homologues Aldo Nicosia 1,* ID , Carmelo Bennici 1, Girolama Biondo 1, Salvatore Costa 2 ID , Marilena Di Natale 1, Tiziana Masullo 1, Calogera Monastero 1, Maria Antonietta Ragusa 2, Marcello Tagliavia 1 and Angela Cuttitta 1,* 1 National Research Council-Institute for Marine and Coastal Environment (IAMC-CNR), Laboratory of Molecular Ecology and Biotechnology, Detached Unit of Capo Granitola, Via del mare, 91021 Torretta Granitola (TP), Sicily, Italy; [email protected] (C.B.); [email protected] (G.B.); [email protected] (M.D.N.); [email protected] (T.M.); [email protected] (C.M.); [email protected] (M.T.) 2 Department of Biological, Chemical and Pharmaceutical Sciences and Technologies, University of Palermo, Viale delle Scienze, Ed. 16, 90128 Palermo, Sicily, Italy; [email protected] (S.C.); [email protected] (M.A.R.) * Correspondence: [email protected] (A.N.); [email protected] (A.C.); Tel.: +39-0924-40600 (A.N. & A.C.) Received: 10 November 2017; Accepted: 5 January 2018; Published: 11 January 2018 Abstract: Gene family encoding translationally controlled tumour protein (TCTP) is defined as highly conserved among organisms; however, there is limited knowledge of non-bilateria. In this study, the first TCTP homologue from anthozoan was characterised in the Mediterranean Sea anemone, Anemonia viridis. The release of the genome sequence of Acropora digitifera, Exaiptasia pallida, Nematostella vectensis and Hydra vulgaris enabled a comprehensive study of the molecular evolution of TCTP family among cnidarians. -
Anthopleura and the Phylogeny of Actinioidea (Cnidaria: Anthozoa: Actiniaria)
Org Divers Evol (2017) 17:545–564 DOI 10.1007/s13127-017-0326-6 ORIGINAL ARTICLE Anthopleura and the phylogeny of Actinioidea (Cnidaria: Anthozoa: Actiniaria) M. Daly1 & L. M. Crowley2 & P. Larson1 & E. Rodríguez2 & E. Heestand Saucier1,3 & D. G. Fautin4 Received: 29 November 2016 /Accepted: 2 March 2017 /Published online: 27 April 2017 # Gesellschaft für Biologische Systematik 2017 Abstract Members of the sea anemone genus Anthopleura by the discovery that acrorhagi and verrucae are are familiar constituents of rocky intertidal communities. pleisiomorphic for the subset of Actinioidea studied. Despite its familiarity and the number of studies that use its members to understand ecological or biological phe- Keywords Anthopleura . Actinioidea . Cnidaria . Verrucae . nomena, the diversity and phylogeny of this group are poor- Acrorhagi . Pseudoacrorhagi . Atomized coding ly understood. Many of the taxonomic and phylogenetic problems stem from problems with the documentation and interpretation of acrorhagi and verrucae, the two features Anthopleura Duchassaing de Fonbressin and Michelotti, 1860 that are used to recognize members of Anthopleura.These (Cnidaria: Anthozoa: Actiniaria: Actiniidae) is one of the most anatomical features have a broad distribution within the familiar and well-known genera of sea anemones. Its members superfamily Actinioidea, and their occurrence and exclu- are found in both temperate and tropical rocky intertidal hab- sivity are not clear. We use DNA sequences from the nu- itats and are abundant and species-rich when present (e.g., cleus and mitochondrion and cladistic analysis of verrucae Stephenson 1935; Stephenson and Stephenson 1972; and acrorhagi to test the monophyly of Anthopleura and to England 1992; Pearse and Francis 2000). -
Gastropods Morphometric Shell Landmarks Variation in Diyala River
International Journal of Applied Research 2015; 1(10): 660-664 ISSN Print: 2394-7500 ISSN Online: 2394-5869 Gastropods Morphometric Shell Landmarks variation Impact Factor: 5.2 IJAR 2015; 1(10): 660-664 in Diyala River Basin, Iraq www.allresearchjournal.com Received: 22-07-2015 Accepted: 24-08-2015 Khansaa S Farman, Emaduldeen A Almukhtar Khansaa S Farman Department of Biology, Abstract Collage of Science for Women, The present study was conducted to detected the variation in the shells of the Freshwater Gastropods Baghdad University Iraq. species of Diyala River Basin in Iraq. For this purpose the study area was divided to two sectors, Northern and Southern sectors. The morphological variation in the shells among common species to Emaduldeen A Almukhtar Northern and Southern sectors using a Geometric Morphometric technique were examined. Department of Biology, The most abundant species Theodoxus jordani, Melanopsis praemorsa, Lymnaea natalensis, and Collage of Science for Women, Planorbis gibbonsi were collected and their shells variation in the size and shape were measured. The Baghdad University Iraq. results showed significant difference in centroid size for M. praemorsa and L. natalensis while didn’t record in T. jordani and Poggibonsi. Also the study didn’t record significance variance of symmetrical for size and shape of the shell in all species. Key words: Geometric morphometric, Landmarks, Gastropods, Diyala river Introduction Diyala river is one of the most important tributaries of River Tigris, and is one of the main water bodies of Iraq. It runs through Iran and Iraq drains an area of 32600 km2 and about [2] 445 km. -
Seashore Pocket Guide
. y a B e e L d n a n i t r a M e b m o C , h t u o m n y L ) e v o b a ( . e m i t m e h t e v i g u o y f i e c i v e r c n e d d i h a m o r f t u o . a n i l l a r o c d n a e s l u d s a h c u s s d e e w a e s b a r C e l b i d E k u . v o g . k r a p l a n o i t a n - r o o m x e . w w w e r a t s a o c s ’ r o o m x E n o e f i l d l i w e r o h s a e s k c a b e v o m n e t f o l l i w s b a r c d n a h s i F . l l i t s y r e v g n i p e e k d e r r e v o c s i d n a c u o y s l o o p k c o r r o f k o o l o t s e c a l p e t i r u o v a f r u o f o e m o S , g n i h c t a w e m i t d n e p S . -
(Jasus Edwardsii Hutton, 1875) Larvae
Environmental Physiology of Cultured Early-Stage Southern Rock Lobster (Jasus edwardsii Hutton, 1875) Larvae Michel Francois Marie Bermudes Submitted in fulfilment of the requirements for the degree of Doctor Of Philosophy University of Tasmania November 2002 Declarations This thesis contains no material which has been accepted for a degree or diploma by the University or any other institution, except by way of background information in duly acknowledged in the thesis, and to the best of the candidate's knowledge and belief, no material previously published or written by another person except where due acknowledgment is made in the text of the thesis. Michel Francois Marie Bermudes This thesis may be available for loan and limited copying in accordance with the Copyright Act 1968. Michel Francois Marie Bermudes Abstract The aim of this project was to define more clearly the culture conditions for the propagation of the southern rock lobster (Jasus echvardsii) in relation to environmental bioenergetic constraints. The effects of temperature and photoperiod on the first three stages of development were first studied in small-scale culture experiments. Larvae reared at 18°C developed faster and reached a larger size at stage IV than larvae cultured at 14°C. Development through stage II was shorter under continuous light. However, the pattern of response to photoperiod shifted at stage III when growth was highest in all the light/dark phase treatments than under continuous light. The influence of temperature and light intensity in early-stage larvae was further investigated through behavioural and physiological studies. Results obtained in stages I, II and III larvae indicated an energetic imbalance at high temperature (-22°C). -
Seasonal Variation in Community Structure and Recruitment of Benthic Decapods in a Sub-Tidal Cobble Habitat
MARINE ECOLOGY PROGRESS SERIES Vol. 206: 181–191, 2000 Published November 3 Mar Ecol Prog Ser Seasonal variation in community structure and recruitment of benthic decapods in a sub-tidal cobble habitat Martin Robinson*, Oliver Tully Department of Zoology, Trinity College, Dublin, Ireland ABSTRACT: Quantitative suction samples of benthic decapod fauna were taken in the south of Ireland during 1997. Some species settled into the area, but failed to persist to the first winter, while others were present in high numbers throughout the year. The duration of settlement was species- specific, ranging from several weeks to several months. Body size at settlement decreased with increasing temperature during larval development. Growth potential and early mortality of a number of decapod species was examined by separation of successive moult instars from length-frequency distributions. Seasonal lows in abundance and biomass of young of the year and for previously estab- lished decapod individuals were identified at the end of July and early August, which may represent the most suitable time to release juveniles for stock-enhancement purposes. Community structure differed between settlement season and over-wintering periods. Young-of-the-year community structure differed from that of previously established individuals, with higher abundance and num- ber of species recorded for the former. The data represent a baseline study of a widely distributed community and may support further work on species interactions, improving the accuracy of predic- tion of annual recruitment fluctuations. KEY WORDS: Community · Decapod · Recruitment · Seasonal variation Resale or republication not permitted without written consent of the publisher INTRODUCTION strong 1995, Pile et al. -
On the Fauna of Corallina Officinalis L
T~' Lt CL i:cJ:> i \lvVl Le (/Vl k'>~tj ; U B. 1> ! "I't,:<A.t.>U-'> k' If'/, t S'(,-.'-c k' "L K~. /3<- r-~-0-l,\ 2 Cf/.y - I:.:i( li--re. J)O"l/l,,- \.-1,\_ (;,..-:' H._ c>'(, HOVEDFAGSOPPGAVE I MARIN ZOOLOGI T.IL MAT.EMAT lSK-NATJJRVIT.ENSKAP EL la. EMBETSEKSAMEN ON THE FAUNA OF CORALLINA OFFlCINALIS L.' by Are Dommasnes CONTENTS Page; ABSTRACT 1 INTRODUCTIOt-l 1 THE LOCALITIES 2 THE GROWTH TYPES OF CORALLINA OFFICINALIS 5 TEMPERATURE AND SALINITY 6 COLLECTION AND EXAMINATION OF THE SAMPLES 7 THE FAUNA 9 Foraminifera 9 Cnidaria 10 Turbellaria 10 Nemertini 10 Nematoda 10 Polychaeta 11 Harpacticoida 13 Ostracoda 13 Isopoda 14 Tanaidacea 16 Amphipoda 16 Decapoda 19 Insecta 20 Halacaridae 20 Pycnogonida 20 Gastropoda 20 Bivalvia 22 Bryozoa 24 Echinodermata 25 Ascidiacea 25 DISCUSSION 26 The size of the animals 26 Effects of the wave exposure 27 Food and feeding-biology 29 Predation from animals living outside the Corallina growth 33 SOME COMMENTS, A~D SUGGESTIONS FOR FUTURE RESEARCH ON THE FAUNA OF CORALLIlIJA OFFICINALIS 34 SUMJ.VIARY 36 ACKNOWLEDGEMENTS 37 REFERENCES 38 ABSTRACT The fauna of Corallina officinalis has been studied at three localities south of Bergen, Norway. A list of species is given. A distinct distribution pattern is shown for some species, and this is discussed with reference to the wave exposure. The feeding-biology of the fauna is also discussed and some suggestions are given for future research on the fauna of Corallina officinalis. -I NTRODUCT I01~ When this rese~rch work started, my intention was to find (1) which animals lived in the Qorallina growths (2) how the fauna varied with wave exposure (3) how the fauna varied with depth and (4) the seasonal variations during the year. -
Composition, Seasonal Occurrence, Distribution and Reproductive Periodicity of the Marine Rhodophyceae in New Hampshire
University of New Hampshire University of New Hampshire Scholars' Repository Doctoral Dissertations Student Scholarship Spring 1969 COMPOSITION, SEASONAL OCCURRENCE, DISTRIBUTION AND REPRODUCTIVE PERIODICITY OF THE MARINE RHODOPHYCEAE IN NEW HAMPSHIRE EDWARD JAMES HEHRE JR. Follow this and additional works at: https://scholars.unh.edu/dissertation Recommended Citation HEHRE, EDWARD JAMES JR., "COMPOSITION, SEASONAL OCCURRENCE, DISTRIBUTION AND REPRODUCTIVE PERIODICITY OF THE MARINE RHODOPHYCEAE IN NEW HAMPSHIRE" (1969). Doctoral Dissertations. 897. https://scholars.unh.edu/dissertation/897 This Dissertation is brought to you for free and open access by the Student Scholarship at University of New Hampshire Scholars' Repository. It has been accepted for inclusion in Doctoral Dissertations by an authorized administrator of University of New Hampshire Scholars' Repository. For more information, please contact [email protected]. This dissertation has been microfilmed exactly as received 70-2076 HEHRE, J r., Edward Jam es, 1940- COMPOSITION, SEASONAL OCCURRENCE, DISTRIBUTION AND REPRODUCTIVE PERIODICITY OF THE MARINE RHODO- PHYCEAE IN NEW HAMPSHIRE. University of New Hampshire, Ph.D., 1969 Botany University Microfilms, Inc., Ann Arbor, M ichigan COMPOSITION, SEASONAL OCCURRENCE, DISTRIBUTION AND REPRODUCTIVE PERIODICITY OF THE MARINE RHODOPHYCEAE IN NEW HAMPSHIRE TV EDWARD J^HEHRE, JR. B. S., New England College, 1963 A THESIS Submitted to the University of New Hampshire In Partial Fulfillment of The Requirements f o r the Degree of Doctor of Philosophy Graduate School Department of Botany June, 1969 This thesis has been examined and approved. Thesis director, Arthur C. Mathieson, Assoc. Prof. of Botany Thomas E. Furman, Assoc. P rof. of Botany Albion R. Hodgdon, P rof. of Botany Charlotte G. -
First Record of the Marine Alien Amphipod Caprella Mutica (Schurin, 1935) in South Africa
BioInvasions Records (2017) Volume 6, Issue 1: 61–66 Open Access DOI: https://doi.org/10.3391/bir.2017.6.1.10 © 2017 The Author(s). Journal compilation © 2017 REABIC Rapid Communication First record of the marine alien amphipod Caprella mutica (Schurin, 1935) in South Africa Koebraa Peters and Tamara B. Robinson* Centre for Invasion Biology, Department of Botany and Zoology, Stellenbosch University, Matieland, 7602, South Africa E-mail addresses: [email protected] (KP), [email protected] (TBR) *Corresponding author Received: 22 July 2016 / Accepted: 5 December 2016 / Published online: 15 December 2016 Handling editor: Elisabeth Cook Abstract We report the first discovery of the marine amphipod Caprella mutica (Schurin, 1935), commonly known as the Japanese skeleton shrimp, in South African waters. This amphipod is indigenous to north-east Asia and has invaded several regions, including Europe, North America, New Zealand and now South Africa. C. mutica was detected in scrape samples from the hulls and niche areas of four yachts resident to False Bay Marina, Simon’s Town, on South Africa’s South Coast. A total of 2,157 individuals were recorded, comprising 512 males, 966 females (20% of which were gravid) and 679 juveniles. The yachts upon which this amphipod was found were not alongside each other, suggesting that the species is widely distributed within the marina. The presence of C. mutica in South Africa has been anticipated, as previous work highlighted the climatic suitability of the region and the presence of vectors between South Africa and other invaded areas. The fast reproductive cycle of C. mutica, along with its high reproductive output, have important implications for its invasiveness in South Africa. -
R on Anew British Sea Anemone. by T
[ 880 ~ r On aNew British Sea Anemone. By T. A~ Stephenson, D.Se., Department of Zoology, University Oollege, London With 1 Figure in the Text. IT is a curious fact that the majority of the British anemones had been discovered by 1860, and that half of them, as listed at that date, had been established during a burst of energy on the part of Gosse and his collectingfriends. Gosseadded 28 speciesto the BritishFauna himself. It is still more surprising that since Gosse ceased work, no authentic new ones have been added, other than more or less offshore forms, with'the ex- ception of Sagartia luci()3,'and this species appears to have been imported from abroad. There is, however, an anemone which occurs on the Break- water and Pier at Plymouth, which has not yet been described. Dr. Allen tells me it has been on the Breakwater as long as he can remember, and to him I am indebted for the details of its habitat given further on. Whether it occurs elsewhere than in the Plymouth district and has been seen but mistaken for the young of Metridiurn dianthus, is as yet unknown. The anemone in question, which is the subject of this paper, is a small creature, bright orange or fawn in colour, and presenting at first sight some resemblance to. young specimens of certain colour-varieties of Metridium. When the two forms are observed carefully, however, and irnder heaJ:thy conditions, it becomes evident that they are perfectly distinct from each other; and a study of their anatomy bears out this fact. -
Some Considerations for Analyzing Biodiversity Using Integrative
Some considerations for analyzing biodiversity using integrative metagenomics and gene networks Lucie Bittner, Sébastien Halary, Claude Payri, Corinne Cruaud, Bruno de Reviers, Philippe Lopez, Eric Bapteste To cite this version: Lucie Bittner, Sébastien Halary, Claude Payri, Corinne Cruaud, Bruno de Reviers, et al.. Some considerations for analyzing biodiversity using integrative metagenomics and gene networks. Biology Direct, BioMed Central, 2010, 5 (5), pp.47. 10.1186/1745-6150-5-47. hal-02922363 HAL Id: hal-02922363 https://hal.archives-ouvertes.fr/hal-02922363 Submitted on 26 Aug 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Bittner et al. Biology Direct 2010, 5:47 http://www.biology-direct.com/content/5/1/47 HYPOTHESIS Open Access Some considerations for analyzing biodiversity using integrative metagenomics and gene networks Lucie Bittner1†, Sébastien Halary2†, Claude Payri3, Corinne Cruaud4, Bruno de Reviers1, Philippe Lopez2, Eric Bapteste2* Abstract Background: Improving knowledge of biodiversity will benefit conservation biology, enhance bioremediation studies, and could lead to new medical treatments. However there is no standard approach to estimate and to compare the diversity of different environments, or to study its past, and possibly, future evolution. -
Diversity and Distribution of Sea-Anemones (Cnidaria : Actiniaria) in the Estuaries and Mangroves of Odisha, India
ISSN 0375-1511 Rec. zool. Surv. India: 113(Part-3): 113-118,2013 DIVERSITY AND DISTRIBUTION OF SEA-ANEMONES (CNIDARIA : ACTINIARIA) IN THE ESTUARIES AND MANGROVES OF ODISHA, INDIA SANTANU MITRA* AND J.G. PATTANAYAK Zoological Survey of India 27, J. L. Nehru Road, Kolkata-700 016, West Bengal, India * [email protected] INTRODUCTION anemone Paracondylactis sinensis (Carlgren) was Actiniarians, popularly called as 'Sea collected by digging the sandy mud 20-25 cm around the specimens up to depth of about 70-120 Anemones', belongs to the phylum Cnidaria form cm depending on the size of the anemone. The an important group of intertidal invertebrate animals were detached from the substratum by distinguished by their habit, habitat and beautiful lifting the basal disc manually and narcotized colouration. This group was not elaborately with 1 % formalin for the period of 6-8 hours. The studied from India. However Annandale (1907 & narcotized anemones with fully expanded 1915), Carlgren (1925 & 1949), Parulekar (1968 & condition were preserved in 10% formalin for 1990), Seshyia and Cuttress (1971), Misra (1975 & further studies. 1976) and Bairagi (1998, 2001) worked on this SYSTEMATIC ACCOUNTS group and a total 40 species of sea anemones belongs to 33 genera and 17 families so far Phylum CNIDARIA Class ANTHOZOA recorded from India. During the recent faunal Subclass HEXACORALLIA survey (2010-2011) of Estuaries and Mangrove Order ACTINIARIA fringed coastal districts of Odisha, the authors Family EDW ARDSIIDAE encountered a quite good number of specimens of 1. Edwardsia jonesii Seshaiya & Cuttress, 1969 this group. After proper identification these 2. Edwardsia tinctrix Annandale, 1915 reveals 5 species belonging to 4 genera and 3 Family HALIACTIIDAE families.