Response of Sulfide:Quinone Oxidoreductase to Sulfide Exposure in the Echiuran Worm Urechis Unicinctus

Total Page:16

File Type:pdf, Size:1020Kb

Response of Sulfide:Quinone Oxidoreductase to Sulfide Exposure in the Echiuran Worm Urechis Unicinctus Mar Biotechnol DOI 10.1007/s10126-011-9408-1 ORIGINAL ARTICLE Response of Sulfide:Quinone Oxidoreductase to Sulfide Exposure in the Echiuran Worm Urechis unicinctus Yu-Bin Ma & Zhi-Feng Zhang & Ming-Yu Shao & Kyoung-Ho Kang & Xiao-Li Shi & Ying-Ping Dong & Jin-Long Li Received: 15 May 2011 /Accepted: 22 September 2011 # Springer Science+Business Media, LLC 2011 Abstract Sulfide is a natural, widely distributed, poisonous U. unicinctus sulfide-induced detoxification mechanism substance, and sulfide:quinone oxidoreductase (SQR) is was also discussed. responsible for the initial oxidation of sulfide in mitochon- dria. In this study, we examined the response of SQR to Keywords Mitochondria . Sulfide detoxification . Sulfide: sulfide exposure (25, 50, and 150 μM) at mRNA, protein, quinone oxidoreductase (SQR) . Urechis unicinctus and enzyme activity levels in the body wall and hindgut of the echiuran worm Urechis unicinctus, a benthic organism living in marine sediments. The results revealed SQR Introduction mRNA expression during sulfide exposure in the body wall and hindgut increased in a time- and concentration- Animals, inhabiting environments such as mudflats, marshes, dependent manner that increased significantly at 12 h and cold seeps, and hydrothermal vents can be periodically or − continuously increased with time. At the protein level, SQR continuously exposed to sulfide (the sum of H2S, HS ,and expression in the two tissues showed a time-dependent S2−) (Julian et al. 2005). Sulfide is a well-known toxin with relationship that increased significantly at 12 h in 50 μM the potential to harm organisms through, for example, sulfide and 6 h in 150 μM, and then continued to increase reversible inhibition of cytochrome c oxidase (Evans 1967; with time while no significant increase appeared after 25 Nicholls 1975), decreased hemoglobin oxygen affinity μM sulfide exposure. SQR enzyme activity in both tissues (Carrico et al. 1978), sulfhemoglobin formation (Bagarinao increased significantly in a time-dependent manner after 50 1992; Kraus et al. 1996), mitochondrial depolarization (Julian μM sulfide exposure. We concluded that SQR expression et al. 2005), coelomocyte death, decreased cell proliferation could be induced by sulfide exposure and that the two (Hance et al. 2008), inhibition of almost 20 enzymes involved tissues studied have dissimilar sulfide metabolic patterns. A in aerobic metabolism (Bagarinao 1992), and oxidative damage to RNA and DNA (Joyner-Matos et al. 2010). Mitochondrial sulfide oxidation is an important mechanism : * : : : Y.-B. Ma Z.-F.: Zhang ( ) M.-Y. Shao X.-L. Shi for reducing sulfide toxicity in sulfide-adapted animals Y.-P. Dong J.-L. Li (Grieshaber and Völkel 1998). Some invertebrates, such as Ministry of Education, Key Laboratory of Marine Genetics the gutless clam Solemya reidi and the lugworm Arenicola and Breeding, Ocean University of China, Qingdao 266003, China marina, use mitochondria to oxidize sulfide and even produce e-mail: [email protected] ATP from the substrate (Powell and Somero 1986; Völkel and Grieshaber 1997). In A. marina mitochondria, electrons from Y.-B. Ma sulfide oxidization are transferred to ubiquinone concurrent Shandong Provincial Key Laboratory of Energy Genetics, Key Laboratory of Biofuels, Qingdao Institute of Bioenergy with thiosulfate production (Wohlgemuth et al. 2000). and Bioprocess Technology, Chinese Academy of Sciences, In A. marina, sulfide:quinone oxidoreductase (SQR), Qingdao 266101, China originally molecularly characterized in animal at 2003 (Theissen et al. 2003), is involved in electron transfer from K.-H. Kang Department of Aquaculture, Chonnam National University, sulfide to ubiquinone and converts sulfide to persulfides Yeosu 550749, South Korea (Theissen and Martin 2008). Subsequently, a putative sulfur Mar Biotechnol dioxygenase oxidizes a persulfide molecule into sulfite August 2008 in Yantai (China), were maintained for 1 week and a second persulfide is added to sulfite by a sulfur in an aerated re-circulating seawater aquarium (20±1°C, transferase-rhodanese, producing thiosulfate (Hildebrandt pH 8.25±0.02, and 25‰ salinity), and were fed microalgae and Grieshaber 2008a). Also, in this species, the cellular (Chlorella vulgaris and Mtzschia closterium). Feeding was redox state has been shown to regulate mitochondrial sulfide suspended 24 h prior to experimentation. oxidation (Hildebrandt and Grieshaber 2008b). Recently, the Three sulfide concentrations were used in this study, mitochondrial sulfide oxidation pathway, which involves 25 μM, which was regarded as that of lightly polluted SQR, sulfur dioxygenase (ethylmalonic encephalopathy 1) sediments; 50 μM, equivalent to moderately polluted sedi- and rhodanese, has been validated in mammals (Tiranti et al. ments; and 150 μM, similar to heavily polluted sediments 2009). Figure 1 illustrates the mitochondrial sulfide oxida- (data from our field measurements in Yantai, China). The tion pathway, electron transport, and ATP production in this experiment was conducted in airproof glass tanks. Worms pathway. However, whether these sulfide metabolic enzymes were randomly assigned to four groups, three sulfide treat- function under an in vivo sulfide environment is not known. ments and a control (natural seawater). Five worms were In addition, information on their expression regulation after placed in a 10 L water tank containing 7.5 L of seawater and a sulfide exposure is also lacking. Investigations which could total of 28 tanks were used in the experiment. The sulfide help explain sulfide metabolic adaptation in sulfide-adapted concentrations in treatment groups were produced by sodium animals have not been reported. sulfide (Na2S–9H2O), and maintained by sodium sulfide Echiurans are often found in habitats with high sulfide compensation at 2 h intervals. The sulfide level was levels. For example, Urechis caupo (Echiura) is a sulfide- monitored using a spectrophotometer and the methylene adapted animal found along the coast of California and is blue method (Cline 1969). Three worms were removed from close to the well-studied A. marina in ecology habitat and tanks at 0, 0.5, 2, 6, 12, 24, and 48 h after initiation of sulfide phylogenetic tree. Studies on this species have included exposure. The body wall and hindgut of the worms were morphological adaptations of tissues to sulfide, including excised, frozen in liquid nitrogen, and stored at −80°C for unusual organelles named sulfide-oxidizing bodies (Menon subsequently analysis. and Arp 1992;MenonandArp1993;MenonandArp1998), aerobic respiration (Eaton and Arp 1993), hydrogen sulfide Quantitative Analysis of SQR mRNA Expression in Tissues oxidation of heme compounds (Powell and Arp 1989;Arpet al. 1995, review), and sulfide oxidation product (Bogan et al. Total RNA was extracted from the body wall and hindgut 1992;BoganandArp1993) and its elimination (Julian et al. with Trizol (Invitrogen) according to the manufacturer’s 1999). Urechis unicinctus, a species related to U. caupo,is protocol. RNA quality was assessed by 1% agarose gel mainly distributed in China, Korea, Russia, and Japan and electrophoresis, and the RNA concentration and purity inhabits marine sediments, especially in intertidal and determined from the absorbances at 260 and 280 nm. First- subtidal mudflats (Li et al. 1994). This species has sulfide strand cDNA was synthesized using a reverse transcription metabolic adaptations similar to those of U. caupo (Zhang et system (Promega). The cDNA mixture was diluted (1:5) to al. 2003; 2006; Ma et al. 2005; Wang et al. 2010). a final concentration of approximately 240 ng/μl, and then Furthermore, we demonstrated that U. unicinctus could stored at −20°C for later real-time PCR. produce ATP from sulfide as the only substrate, which is Real-time PCR was performed using a fluorescence similar to A. marina (Ma et al. 2010), and recombinant U. temperature cycler (PE Applied Biosystems, 7500 Real- unicinctus SQR expression in Escherichia coli could catalyze Time PCR Systems) and SYBR Green I as a double- sulfide oxidation in vitro (Km for sulfide 40.3 μM) (Ma et al. stranded DNA-specific binding dye. The optimized reactions 2011). In this study, to extend the understanding of sulfide of the real-time PCR were conducted according to manufac- metabolic adaptations, we present the SQR dynamic change turer’s instructions (Toyobo) using β-actin as the internal during mRNA expression, protein expression, and enzyme standard. The primer sequences were: 5′-CTGGCAG activity in the body wall and hindgut of U. unicinctus when CATGTCAAGAAAA-3′ (sense) and 5′-GAGCTCCAGCA exposed to sulfide in the laboratory. CATTTGACA-3′ (antisense) for SQR; and 5′- TTCTTGGGAATGGAATCTGC-3′ (sense) and 5′- CTTCTGCATACGGTCAGCAA-3′ (antisense) for β-actin. Materials and Methods Amplifications were carried out using 10 μL of 2× SYBR Green PCR Master Mix, 1 μLofeachprimer(2μM), 1 μL Animals and Exposure to Sulfide of cDNA in a total volume of 20 μL. Real-time PCR conditions were 95°C for 10 min, followed by 40 cycles at Individuals of U. unicinctus (mean fresh mass of 33.4± 95°C for 15 s, and 60°C for 1 min. Full-length sequences of 10.4 g), collected from a coastal intertidal flat during SQR (GenBank accession number: EF487538) and β-actin Mar Biotechnol Fig. 1 Model of the mitochondrial sulfide oxidation pathway, electron transport, and ATP production during sulfide oxidation (modified from + + 4H 2H Grieshaber and Völkel 1998; Intermembrane space Cyt c Kabil and Banerjee 2010; Hildebrandt
Recommended publications
  • Zootaxa: Systematics of the Genus Scleroplax Rathbun, 1893
    Zootaxa 1344: 33–41 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1344 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) Systematics of the genus Scleroplax Rathbun, 1893 (Crustacea: Brachyura: Pinnotheridae) ERNESTO CAMPOS Facultad de Ciencias, Universidad Autónoma de Baja California, Apartado Postal 2300, Ensenada, Baja California, 22800 México. E-mail: [email protected]; [email protected] Abstract The taxonomic status of the monotypic genus Scleroplax Rathbun, 1893, is evaluated and separated from other genera of the Pinnixa White, 1846, complex. Distinguishing characters of Scleroplax are a hard, subheptagonal and dorsally, highly convex carapace, and a third maxilliped with a propodus that extends to the end of the dactylus. The genera Scleroplax, Pinnixa, Austinixa Heard & Manning, 1997, Glassella Campos & Wicksten, 1997, Indopinnixa Manning & Morton, 1987, and Tetrias Rathbun, 1898, share a carapace than is wider than long and a distinct lateral exopod lobe on the third maxilliped, all of which may represent monophyletic characters. Updated information on the distribution and hosts of S. granulata Rathbun, 1893, indicate that the species now ranges from Vancouver Island, British Columbia, Canada to El Coyote estuary, Punta Abreojos, Baja California Sur, México. It inhabits burrows of the echiuroid Urechis caupo Fisher & MacGinitie, 1928, and the mud shrimps Neotrypaea californiensis (Dana, 1854), N. gigas (Dana, 1852) (new host record), Upogebia pugettensis (Dana, 1852), and occasionally U. macginiteorum Williams, 1986 (new host record). Key words: Crustacea, Brachyura, Pinnotheridae, Scleroplax, systematics, geographic distribution, new hosts Resumen El estatus taxonómico del género monotípico Scleroplax Rathbun, 1893, es evaluado y separado de otros géneros del complejo Pinnixa White, 1846.
    [Show full text]
  • Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism
    Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism Ryutaro Goto1,2*, Tomoko Okamoto2, Hiroshi Ishikawa3, Yoichi Hamamura4, Makoto Kato2 1 Department of Marine Ecosystem Dynamics, Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba, Japan, 2 Graduate School of Human and Environmental Studies, Kyoto University, Kyoto, Japan, 3 Uwajima, Ehime, Japan, 4 Kure, Hiroshima, Japan Abstract The Echiura, or spoon worms, are a group of marine worms, most of which live in burrows in soft sediments. This annelid- like animal group was once considered as a separate phylum because of the absence of segmentation, although recent molecular analyses have placed it within the annelids. In this study, we elucidate the interfamily relationships of echiuran worms and their evolutionary pattern of feeding mode and sexual dimorphism, by performing molecular phylogenetic analyses using four genes (18S, 28S, H3, and COI) of representatives of all extant echiuran families. Our results suggest that Echiura is monophyletic and comprises two unexpected groups: [Echiuridae+Urechidae+Thalassematidae] and [Bone- lliidae+Ikedidae]. This grouping agrees with the presence/absence of marked sexual dimorphism involving dwarf males and the paired/non-paired configuration of the gonoducts (genital sacs). Furthermore, the data supports the sister group relationship of Echiuridae and Urechidae. These two families share the character of having anal chaetae rings around the posterior trunk as a synapomorphy. The analyses also suggest that deposit feeding is a basal feeding mode in echiurans and that filter feeding originated once in the common ancestor of Urechidae. Overall, our results contradict the currently accepted order-level classification, especially in that Echiuroinea is polyphyletic, and provide novel insights into the evolution of echiuran worms.
    [Show full text]
  • Appendix 1. Bodega Marine Lab Student Reports on Polychaete Biology
    Appendix 1. Bodega Marine Lab student reports on polychaete biology. Species names in reports were assigned to currently accepted names. Thus, Ackerman (1976) reported Eupolymnia crescentis, which was recorded as Eupolymnia heterobranchia in spreadsheets of current species (spreadsheets 2-5). Ackerman, Peter. 1976. The influence of substrate upon the importance of tentacular regeneration in the terebellid polychaete EUPOLYMNIA CRESCENTIS with reference to another terebellid polychaete NEOAMPHITRITE ROBUSTA in regard to its respiratory response. Student Report, Bodega Marine Lab, Library. IDS 100 ∗ Eupolymnia heterobranchia (Johnson, 1901) reported as Eupolymnia crescentis Chamberlin, 1919 changed per Lights 2007. Alex, Dan. 1972. A settling survey of Mason's Marina. Student Report, Bodega Marine Lab, Library. Zoology 157 Alexander, David. 1976. Effects of temperature and other factors on the distribution of LUMBRINERIS ZONATA in the substratum (Annelida: polychaeta). Student Report, Bodega Marine Lab, Library. IDS 100 Amrein, Yost. 1949. The holdfast fauna of MACROSYSTIS INTEGRIFOLIA. Student Report, Bodega Marine Lab, Library. Zoology 112 ∗ Platynereis bicanaliculata (Baird, 1863) reported as Platynereis agassizi Okuda & Yamada, 1954. Changed per Lights 1954 (2nd edition). ∗ Naineris dendritica (Kinberg, 1867) reported as Nanereis laevigata (Grube, 1855) (should be: Naineris laevigata). N. laevigata not in Hartman 1969 or Lights 2007. N. dendritica taken as synonymous with N. laevigata. ∗ Hydroides uncinatus Fauvel, 1927 correct per I.T.I.S. although Hartman 1969 reports Hydroides changing to Eupomatus. Lights 2007 has changed Eupomatus to Hydroides. ∗ Dorvillea moniloceras (Moore, 1909) reported as Stauronereis moniloceras (Moore, 1909). (Stauronereis to Dorvillea per Hartman 1968). ∗ Amrein reported Stylarioides flabellata, which was not recognized by Hartman 1969, Lights 2007 or the Integrated Taxonomic Information System (I.T.I.S.).
    [Show full text]
  • Anti-BACE1 and Antimicrobial Activities of Steroidal Compounds Isolated from Marine Urechis Unicinctus
    marine drugs Article Anti-BACE1 and Antimicrobial Activities of Steroidal Compounds Isolated from Marine Urechis unicinctus Yong-Zhe Zhu 1, Jing-Wen Liu 1, Xue Wang 2, In-Hong Jeong 3, Young-Joon Ahn 4 and Chuan-Jie Zhang 5,* ID 1 College of Chemistry and Pharmaceutical Science, Qingdao Agricultural University, Changcheng Rd, Chengyang district, Qingdao 266109, China; [email protected] (Y.-Z.Z.); [email protected] (J.-W.L.) 2 School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou 325035, China; [email protected] 3 Division of Crop Protection, National Institute of Agricultural Science, Rural Development Administration, Jeollabuk-do 55365, Korea; [email protected] 4 Department of Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, Silim-dong, Gwanak-Gu, Seoul 151742, Korea; [email protected] 5 Department of Plant Science, University of Connecticut, 1376 Storrs Road, U-4163, Storrs, CT 06269, USA * Correspondence: [email protected]; Tel.: +1-860-486-2924 Received: 27 December 2017; Accepted: 12 March 2018; Published: 14 March 2018 Abstract: The human β-site amyloid cleaving enzyme (BACE1) has been considered as an effective drug target for treatment of Alzheimer’s disease (AD). In this study, Urechis unicinctus (U. unicinctus), which is a Far East specialty food known as innkeeper worm, ethanol extract was studied by bioassay-directed fractionation and isolation to examine its potential β-site amyloid cleaving enzyme inhibitory and antimicrobial activity. The following compounds were characterized: hecogenin, cholest-4-en-3-one, cholesta-4,6-dien-3-ol, and hurgadacin. These compounds were identified by their mass spectrometry, 1H, and 13C NMR spectral data, comparing those data with NIST/EPA/NIH Mass spectral database (NIST11) and published values.
    [Show full text]
  • Intertidal Organisms of Point Reyes National Seashore
    Intertidal Organisms of Point Reyes National Seashore PORIFERA: sea sponges. CRUSTACEANS: barnacles, shrimp, crabs, and allies. CNIDERIANS: sea anemones and allies. MOLLUSKS : abalones, limpets, snails, BRYOZOANS: moss animals. clams, nudibranchs, chitons, and octopi. ECHINODERMS: sea stars, sea cucumbers, MARINE WORMS: flatworms, ribbon brittle stars, sea urchins. worms, peanut worms, segmented worms. UROCHORDATES: tunicates. Genus/Species Common Name Porifera Prosuberites spp. Cork sponge Leucosolenia eleanor Calcareous sponge Leucilla nuttingi Little white sponge Aplysilla glacialis Karatose sponge Lissodendoryx spp. Skunk sponge Ophlitaspongia pennata Red star sponge Haliclona spp. Purple haliclona Leuconia heathi Sharp-spined leuconia Cliona celata Yellow-boring sponge Plocarnia karykina Red encrusting sponge Hymeniacidon spp. Yellow nipple sponge Polymastia pachymastia Polymastia Cniderians Tubularia marina Tubularia hydroid Garveia annulata Orange-colored hydroid Ovelia spp. Obelia Sertularia spp. Sertularia Abientinaria greenii Green's bushy hydroid Aglaophenia struthionides Giant ostrich-plume hydroid Aglaophenia latirostris Dainty ostrich-plume hydroid Plumularia spp. Plumularia Pleurobrachia bachei Cat's eye Polyorchis spp. Bell-shaped jellyfish Chrysaora melanaster Striped jellyfish Velella velella By-the-wind-sailor Aurelia auria Moon jelly Epiactus prolifera Proliferating anemone Anthopleura xanthogrammica Giant green anemone Anthopleura artemissia Aggregated anemone Anthopleura elegantissima Burrowing anemone Tealia lofotensis
    [Show full text]
  • Symbiotic Polychaetes: Review of Known Species
    Martin, D. & Britayev, T.A., 1998. Oceanogr. Mar. Biol. Ann. Rev. 36: 217-340. Symbiotic Polychaetes: Review of known species D. MARTIN (1) & T.A. BRITAYEV (2) (1) Centre d'Estudis Avançats de Blanes (CSIC), Camí de Santa Bàrbara s/n, 17300-Blanes (Girona), Spain. E-mail: [email protected] (2) A.N. Severtzov Institute of Ecology and Evolution (RAS), Laboratory of Marine Invertebrates Ecology and Morphology, Leninsky Pr. 33, 129071 Moscow, Russia. E-mail: [email protected] ABSTRACT Although there have been numerous isolated studies and reports of symbiotic relationships of polychaetes and other marine animals, the only previous attempt to provide an overview of these phenomena among the polychaetes comes from the 1950s, with no more than 70 species of symbionts being very briefly treated. Based on the available literature and on our own field observations, we compiled a list of the mentions of symbiotic polychaetes known to date. Thus, the present review includes 292 species of commensal polychaetes from 28 families involved in 713 relationships and 81 species of parasitic polychaetes from 13 families involved in 253 relationships. When possible, the main characteristic features of symbiotic polychaetes and their relationships are discussed. Among them, we include systematic account, distribution within host groups, host specificity, intra-host distribution, location on the host, infestation prevalence and intensity, and morphological, behavioural and/or physiological and reproductive adaptations. When appropriate, the possible
    [Show full text]
  • Determination of the Biologically Relevant Sampling Depth for Terrestrial and Aquatic Ecological Risk Assessments
    EPA/600/R-15/176 ERASC-015F October 2015 DETERMINATION OF THE BIOLOGICALLY RELEVANT SAMPLING DEPTH FOR TERRESTRIAL AND AQUATIC ECOLOGICAL RISK ASSESSMENTS Ecological Risk Assessment Support Center National Center for Environmental Assessment Office of Research and Development U.S. Environmental Protection Agency Cincinnati, OH NOTICE This document has been subjected to the Agency’s peer and administrative review and has been approved for publication as an EPA document. Mention of trade names or commercial products does not constitute endorsement or recommendation for use. Cover art on left-hand side is an adaptation of illustrations in two Soil Quality Information Sheets published by the USDA, Natural Resources Conservation Service in May 2001: 1) Rangeland Sheet 6, Rangeland Soil Quality—Organic Matter, and 2) Rangeland Sheet 8, Rangeland Soil Quality—Soil Biota. Cover art on right-hand side is an adaptation of an illustration from Life in the Chesapeake Bay, by Alice Jane Lippson and Robert L. Lippson, published by Johns Hopkins University Press, 2715 North Charles Street, Baltimore, MD 21218. Preferred Citation: U.S. EPA (U.S. Environmental Protection Agency). 2015. Determination of the Biologically Relevant Sampling Depth for Terrestrial and Aquatic Ecological Risk Assessments. National Center for Environmental Assessment, Ecological Risk Assessment Support Center, Cincinnati, OH. EPA/600/R-15/176. ii TABLE OF CONTENTS LIST OF TABLES ........................................................................................................................
    [Show full text]
  • Function of the Anal Sacs and Mid-Gut in Mitochondrial Sulphide
    This article was downloaded by: [Qingdao Institute of Biomass Energy and Bioprocess Technology] On: 28 November 2012, At: 01:39 Publisher: Taylor & Francis Informa Ltd Registered in England and Wales Registered Number: 1072954 Registered office: Mortimer House, 37-41 Mortimer Street, London W1T 3JH, UK Marine Biology Research Publication details, including instructions for authors and subscription information: http://www.tandfonline.com/loi/smar20 Function of the anal sacs and mid-gut in mitochondrial sulphide metabolism in the echiuran worm Urechis unicinctus Yu-Bin Ma a b , Zhi-Feng Zhang a , Ming-Yu Shao a , Kyoung-Ho Kang c , Li-Tao Zhang a , Xiao-Li Shi a & Ying-Ping Dong a a Key Laboratory of Marine Genetics and Breeding of Ministry of Education, Ocean University of China, Qingdao, China b Shandong Provincial Key Laboratory of Energy Genetics, Key Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China c Department of Aquaculture, Chonnam National University, Yeosu, South Korea Version of record first published: 26 Sep 2012. To cite this article: Yu-Bin Ma, Zhi-Feng Zhang, Ming-Yu Shao, Kyoung-Ho Kang, Li-Tao Zhang, Xiao-Li Shi & Ying-Ping Dong (2012): Function of the anal sacs and mid-gut in mitochondrial sulphide metabolism in the echiuran worm Urechis unicinctus , Marine Biology Research, 8:10, 1026-1031 To link to this article: http://dx.doi.org/10.1080/17451000.2012.707320 PLEASE SCROLL DOWN FOR ARTICLE Full terms and conditions of use: http://www.tandfonline.com/page/terms-and-conditions This article may be used for research, teaching, and private study purposes.
    [Show full text]
  • Settlement and Metamorphosis in the Echiura: a Review
    Copyright 1978 by Elsevier/North-Holland Biomedical Press Chia/Rice, eds. Settlement and Metamorphosis of Marine Invertebrate Larvae. SETTLEMENT AND METAMORPHOSIS IN THE ECHIURA: A REVIEW John Pilger Smithsonian Institution, Fort Pierce Bureau, Route 1, Box 194-C, Fort Pierce, Florida 33450 Two types of settlement and metamorphosis are distinguished. Males of the family Bonellidae have specialized attachment structures used during settlement; they undergo an abbreviated, neotenic metamorphosis. Information on settlement of echiurans other than bon ell ids is limited. Metamorphosis of the trochophore proceeds through the loss of trochal bands and protonephridia, as well as the transformation of the gastrointestinal valve and the pre- and posttrochallobes into adult structures. The phenomenon of sex determination in the Bonellidae is reviewed. INTRODUCTION Echiurans occur in benthic habitats in shallow subtidal to hadal ocean depths1 and in some areas, they represent a significant component of the benthic community.2,3 Filter feeding spe­ cies such as Urechis caupo are important in their ability to direct planktonic energy to the marine benthos.4 Most echiurans feed on the nutrients in deposited sediments and thus playa major role in recycling energy in benthic communitit:s.5 The Echiura are suitable subjects for the study of reproduction and development.6 Early workers described the development of species in the genera Echiurus,7,8 Bonellia9,10,1l and Lissomyema (as Thalassema).12 The detailed work of Newby 13 ,14 on Urechis caupo added to the knowledge of echiuran development. Recent investigations have dealt primarily with the cyto­ logical, ultrastructural, and biochemical aspects of gametogenesis (see Gould-Somerol5 for a re­ view).
    [Show full text]
  • Full Text in Pdf Format
    Vol. 13: 211–224, 2021 AQUACULTURE ENVIRONMENT INTERACTIONS Published May 27 https://doi.org/10.3354/aei00395 Aquacult Environ Interact OPEN ACCESS Intestinal microbial diversity and functional analysis of Urechis unicinctus from two different habitats: pond polycultured with Penaeus japonicus and coastal zone Yongzheng Tang1, Shuai Ma1, Yihao Liu2, Yongrui Pi1,*,Ying Liu1, Ye Zhao1 1School of Ocean, Yantai University, Yantai 264005, PR China 2Shandong Key Laboratory of Marine Ecological Restoration, Shandong Marine Source and Environment Research Institute, Yantai 264006, PR China ABSTRACT: Urechis unicinctus is an important commercial and ecological invertebrate that has potential applications in the study of marine invertebrate evolution and marine pharmaceutical development. Here we analyzed the intestinal microbial diversity of U. unicinctus from 2 different habitats using 16S rDNA 454 high-throughput sequencing. The dominant phyla were Proteo - bacteria, Bacterioidetes, Firmicutes, and Actinobacteria in gut samples of U. unicinctus, which significantly differed from those in its 2 habitats (i.e. intertidal mudflat and pond polyculture). Exceptions were Proteobacteria, Firmicutes and Bacterioidetes, which were the dominant phyla in the sediment and water samples. The top 15 genera in the gut samples did not show any signifi- cant differences between the 2 habitats. Functional analysis of the intestinal microbial community showed that metabolism, including carbohydrate and amino acid metabolism, was the most important function. Methane metabolism was one of the main components of energy metabolism. The gut microbes also played an important role in environmental and genetic information pro- cessing, cellular processes, etc. These findings provide an understanding of gut microbiome com- position and diversity in U.
    [Show full text]
  • Urechis Unicinctus
    Hou et al. BMC Genomics (2020) 21:892 https://doi.org/10.1186/s12864-020-07312-4 RESEARCH ARTICLE Open Access Identification of the neuropeptide precursor genes potentially involved in the larval settlement in the Echiuran worm Urechis unicinctus Xitan Hou1, Zhenkui Qin1, Maokai Wei1, Zhong Fu3, Ruonan Liu4,LiLu1, Shumiao Bai1, Yubin Ma1* and Zhifeng Zhang1,2* Abstract Background: In marine invertebrate life cycles, which often consist of planktonic larval and benthonic adult stages, settlement of the free-swimming larva to the sea floor in response to environmental cues is a key life cycle transition. Settlement is regulated by a specialized sensory–neurosecretory system, the larval apical organ. The neuroendocrine mechanisms through which the apical organ transduces environmental cues into behavioral responses during settlement are not fully understood yet. Results: In this study, a total of 54 neuropeptide precursors (pNPs) were identified in the Urechis unicinctus larva and adult transcriptome databases using local BLAST and NpSearch prediction, of which 10 pNPs belonging to the ancient eumetazoa, 24 pNPs belonging to the ancient bilaterian, 3 pNPs belonging to the ancient protostome, 9 pNPs exclusive in lophotrochozoa, 3 pNPs exclusive in annelid, and 5 pNPs only found in U. unicinctus.Furthermore,four pNPs (MIP, FRWamide, FxFamide and FILamide) which may be associated with the settlement and metamorphosis of U. unicinctus larvae were analysed by qRT-PCR. Whole-mount in situ hybridization results showed that all the four pNPs were expressed in the region of the apical organ of the larva, and the positive signals were also detected in the ciliary band and abdomen chaetae.
    [Show full text]
  • Urechis Unicinctus by Digital Gene Expression Analysis Xiaolong Liu†, Litao Zhang†, Zhifeng Zhang*, Xiaoyu Ma and Jianguo Liu
    Liu et al. BMC Genomics (2015) 16:829 DOI 10.1186/s12864-015-2094-z RESEARCH ARTICLE Open Access Transcriptional response to sulfide in the Echiuran Worm Urechis unicinctus by digital gene expression analysis Xiaolong Liu†, Litao Zhang†, Zhifeng Zhang*, Xiaoyu Ma and Jianguo Liu Abstract Background: Urechis unicinctus, an echiuran worm inhabiting the U-shaped burrows in the coastal mud flats, is an important commercial and ecological invertebrate in Northeast Asian countries, which has potential applications in the study of animal evolution, coastal sediment improvement and marine drug development. Furthermore, the worm can tolerate and utilize well-known toxicant-sulfide. However, knowledge is limited on the molecular mechanism of U. unicinctus responding to sulfide due to deficiency of its genetic information. Methods: In this study, we performed Illumina sequencing to obtain the first Urechis unicinctus transcriptome data. Sequenced reads were assembled and then annotated using blast searches against Nr, Nt, Swiss-Prot, KEGG and COG. The clean tags from four digital gene expression (DGE) libraries were mapped to the U. unicinctus transcriptome. DGE analysis and functional annotation were then performed to reveal its response to sulfide. The expressions of 12 candidate genes were validated using quantitative real-time PCR. The results of qRT-PCR were regressed against the DGE analysis, with a correlation coefficient and p-value reported for each of them. Results: Here we first present a draft of U. unicinctus transcriptome using the Illumina HiSeqTM 2000 platform and 52,093 unique sequences were assembled with the average length of 738 bp and N50 of 1131 bp. About 51.6 % of the transcriptome were functionally annotated based on the databases of Nr, Nt, Swiss-Prot, KEGG and COG.
    [Show full text]