Fauna of Australia 4A Polychaetes & Allies, Echiura
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Number of Living Species in Australia and the World
Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure. -
Zootaxa: Systematics of the Genus Scleroplax Rathbun, 1893
Zootaxa 1344: 33–41 (2006) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA 1344 Copyright © 2006 Magnolia Press ISSN 1175-5334 (online edition) Systematics of the genus Scleroplax Rathbun, 1893 (Crustacea: Brachyura: Pinnotheridae) ERNESTO CAMPOS Facultad de Ciencias, Universidad Autónoma de Baja California, Apartado Postal 2300, Ensenada, Baja California, 22800 México. E-mail: [email protected]; [email protected] Abstract The taxonomic status of the monotypic genus Scleroplax Rathbun, 1893, is evaluated and separated from other genera of the Pinnixa White, 1846, complex. Distinguishing characters of Scleroplax are a hard, subheptagonal and dorsally, highly convex carapace, and a third maxilliped with a propodus that extends to the end of the dactylus. The genera Scleroplax, Pinnixa, Austinixa Heard & Manning, 1997, Glassella Campos & Wicksten, 1997, Indopinnixa Manning & Morton, 1987, and Tetrias Rathbun, 1898, share a carapace than is wider than long and a distinct lateral exopod lobe on the third maxilliped, all of which may represent monophyletic characters. Updated information on the distribution and hosts of S. granulata Rathbun, 1893, indicate that the species now ranges from Vancouver Island, British Columbia, Canada to El Coyote estuary, Punta Abreojos, Baja California Sur, México. It inhabits burrows of the echiuroid Urechis caupo Fisher & MacGinitie, 1928, and the mud shrimps Neotrypaea californiensis (Dana, 1854), N. gigas (Dana, 1852) (new host record), Upogebia pugettensis (Dana, 1852), and occasionally U. macginiteorum Williams, 1986 (new host record). Key words: Crustacea, Brachyura, Pinnotheridae, Scleroplax, systematics, geographic distribution, new hosts Resumen El estatus taxonómico del género monotípico Scleroplax Rathbun, 1893, es evaluado y separado de otros géneros del complejo Pinnixa White, 1846. -
Upogebia Pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea the Blue Mud Shrimp Family: Upogebiidae
Phylum: Arthropoda, Crustacea Upogebia pugettensis Class: Malacostraca Order: Decapoda Section: Anomura, Paguroidea The blue mud shrimp Family: Upogebiidae Taxonomy: Dana described Gebia (on either side of the mouth), two pairs of pugettensis in 1852 and this species was later maxillae and three pairs of maxillipeds. The redescribed as Upogebia pugettensis maxillae and maxillipeds attach posterior to (Stevens 1928; Williams 1986). the mouth and extend to cover the mandibles (Ruppert et al. 2004). Description Carapace: Bears two rows of 11–12 Size: The type specimen was 50.8 mm in teeth laterally (Fig. 1) in addition to a small length and the illustrated specimen (ovigerous distal spines (13 distal spines, 20 lateral teeth female from Coos Bay, Fig. 1) was 90 mm in on carapace shoulder, see Wicksten 2011). length. Individuals are often larger and reach Carapace with thalassinidean line extending sizes to 100 mm (range 75–112 mm) and from anterior to posterior margin (Wicksten northern specimens are larger than those in 2011). southern California (MacGinitie and Rostrum: Large, tridentate, obtuse, MacGinitie 1949; Wicksten 2011). rough and hairy (Schmitt 1921), the sides Color: Light blue green to deep olive brown bear 3–5 short conical teeth (Wicksten 2011). with brown fringes on pleopods and pleon. Rostral tip shorter than antennular peduncle. Individual color variable and may depend on Two short processes extending on either side feeding habits (see Fig. 321, Kozloff 1993; each with 0–2 dorsal teeth (Wicksten 2011). Wicksten 2011). Teeth: General Morphology: The body of decapod Pereopods: Two to five simple crustaceans can be divided into the walking legs. -
Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism
Molecular Phylogeny of Echiuran Worms (Phylum: Annelida) Reveals Evolutionary Pattern of Feeding Mode and Sexual Dimorphism Ryutaro Goto1,2*, Tomoko Okamoto2, Hiroshi Ishikawa3, Yoichi Hamamura4, Makoto Kato2 1 Department of Marine Ecosystem Dynamics, Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Chiba, Japan, 2 Graduate School of Human and Environmental Studies, Kyoto University, Kyoto, Japan, 3 Uwajima, Ehime, Japan, 4 Kure, Hiroshima, Japan Abstract The Echiura, or spoon worms, are a group of marine worms, most of which live in burrows in soft sediments. This annelid- like animal group was once considered as a separate phylum because of the absence of segmentation, although recent molecular analyses have placed it within the annelids. In this study, we elucidate the interfamily relationships of echiuran worms and their evolutionary pattern of feeding mode and sexual dimorphism, by performing molecular phylogenetic analyses using four genes (18S, 28S, H3, and COI) of representatives of all extant echiuran families. Our results suggest that Echiura is monophyletic and comprises two unexpected groups: [Echiuridae+Urechidae+Thalassematidae] and [Bone- lliidae+Ikedidae]. This grouping agrees with the presence/absence of marked sexual dimorphism involving dwarf males and the paired/non-paired configuration of the gonoducts (genital sacs). Furthermore, the data supports the sister group relationship of Echiuridae and Urechidae. These two families share the character of having anal chaetae rings around the posterior trunk as a synapomorphy. The analyses also suggest that deposit feeding is a basal feeding mode in echiurans and that filter feeding originated once in the common ancestor of Urechidae. Overall, our results contradict the currently accepted order-level classification, especially in that Echiuroinea is polyphyletic, and provide novel insights into the evolution of echiuran worms. -
Section 3.5 Marine Biology
3.5 MARINE BIOLOGY 3.5.1 Introduction 3.5.1.1 Definition of Resource For purposes of this EIS/OEIS, marine biological resources are defined as marine flora and fauna and habitats that they occupy, occurring within the Point Mugu Sea Range, Mugu Lagoon, and the intertidal and nearshore environment of San Nicolas Island and Point Mugu. This section specifically addresses marine invertebrates and flora. Fish and sea turtles are addressed in Section 3.6, marine mammals are addressed in Section 3.7, and seabirds are addressed in Section 3.8. Threatened and endangered species, as defined by the U.S. Fish and Wildlife Service (USFWS), are also addressed. Species that are federally listed are afforded a degree of regulatory protection, which entails a permitting process including specific mitigation measures for any allowable (incidental) impacts on the species. Species that are proposed to be listed by the USFWS are treated similarly to listed species by that agency; recommendations of the USFWS, however, are advisory rather than mandatory in the case of proposed species. A federally listed endangered species is defined as any species, including subspecies, that is “in danger of extinction throughout all or a significant portion of its range.” A federally listed threatened species is defined as any species “likely to become an endangered species within the foreseeable future throughout all or a significant portion of its range.” “Proposed” endangered or threatened species are those species for which a proposed regulation has been published in the Federal Register, but a final rule has not yet been issued. 3.5.1.2 Regional Setting The Sea Range straddles the ocean off Point Conception which is considered a major geographic feature that affects marine biological diversity. -
Sex Determination in Bonellia Viridis (Echiura: Bonelliidae): Population Dynamics and Evolution
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by OAR@UM OIKOS 108: 473Á/484, 2005 Sex determination in Bonellia viridis (Echiura: Bonelliidae): population dynamics and evolution Ludek Berec, Patrick J. Schembri and David S. Boukal Berec, L., Schembri, P. J. and Boukal, D. S. 2005. Sex determination in Bonellia viridis (Echiura: Bonelliidae): population dynamics and evolution. Á/ Oikos 108: 473Á/484. In the echiuran worm Bonellia viridis Rolando, the vast majority of sexually undifferentiated larvae metamorphose into dwarf males that live inside the female when exposed to females, but differentiate into females when developing in the absence of females. By means of a spatially explicit, individual-based model we examine how this specific form of environmental sex determination (ESD) affects dynamics of Bonellia populations and investigate the selective advantage of ESD over the more widespread genotypic sex determination (GSD). Population dynamics of Bonellia appear rather simple and not too sensitive to parameter changes around their measured values, or to changes in distribution and sizes of inhabitable patches. Starting even from low sizes, populations soon attain equilibrium densities. Explored aspects of population dynamics indicate an advantage of ESD over GSD. Moreover, simulated invasibility experiments show that while the maternal inheritance scenario allows for fixation of GSD under some limited conditions, both the classical and proportional inheritance scenarios always lead to fixation of ESD in the population. We also show that only the ability of ESD larvae to adapt their ultimate sex both in competition for empty burrows and for mating within females gives them a competitive edge over nonadaptive response to feminising and/or masculinising signals and generally leads to fixation of ESD by small step evolution. -
Anti-BACE1 and Antimicrobial Activities of Steroidal Compounds Isolated from Marine Urechis Unicinctus
marine drugs Article Anti-BACE1 and Antimicrobial Activities of Steroidal Compounds Isolated from Marine Urechis unicinctus Yong-Zhe Zhu 1, Jing-Wen Liu 1, Xue Wang 2, In-Hong Jeong 3, Young-Joon Ahn 4 and Chuan-Jie Zhang 5,* ID 1 College of Chemistry and Pharmaceutical Science, Qingdao Agricultural University, Changcheng Rd, Chengyang district, Qingdao 266109, China; [email protected] (Y.-Z.Z.); [email protected] (J.-W.L.) 2 School of Pharmaceutical Sciences, Wenzhou Medical University, Wenzhou 325035, China; [email protected] 3 Division of Crop Protection, National Institute of Agricultural Science, Rural Development Administration, Jeollabuk-do 55365, Korea; [email protected] 4 Department of Agricultural Biotechnology, Seoul National University, 599 Gwanak-ro, Silim-dong, Gwanak-Gu, Seoul 151742, Korea; [email protected] 5 Department of Plant Science, University of Connecticut, 1376 Storrs Road, U-4163, Storrs, CT 06269, USA * Correspondence: [email protected]; Tel.: +1-860-486-2924 Received: 27 December 2017; Accepted: 12 March 2018; Published: 14 March 2018 Abstract: The human β-site amyloid cleaving enzyme (BACE1) has been considered as an effective drug target for treatment of Alzheimer’s disease (AD). In this study, Urechis unicinctus (U. unicinctus), which is a Far East specialty food known as innkeeper worm, ethanol extract was studied by bioassay-directed fractionation and isolation to examine its potential β-site amyloid cleaving enzyme inhibitory and antimicrobial activity. The following compounds were characterized: hecogenin, cholest-4-en-3-one, cholesta-4,6-dien-3-ol, and hurgadacin. These compounds were identified by their mass spectrometry, 1H, and 13C NMR spectral data, comparing those data with NIST/EPA/NIH Mass spectral database (NIST11) and published values. -
Soil-Dwelling Polychaetes: Enigmatic As Ever? Some Hints on Their
Contributions to Zoology, 70 (3) 127-138 (2001) SPB Academic Publishing bv, The Hague Soil-dwelling polychaetes: enigmatic as ever? Some hints on their phylogenetic relationships as suggested by a maximum parsimony analysis of 18S rRNA gene sequences ³ Emilia Rota Patrick Martin² & Christer Erséus ¹, 1 di Dipartimento Biologia Evolutivei. Universitd di Siena, via P. A. Mattioli 4. IT-53100 Siena, Italy, e-mail: 2 Institut des Sciences naturelles de des [email protected]; royal Belgique, Biologic Eaux donees, 29 rue Vautier, B-1000 e-mail: 3 Bruxelles, Belgium, [email protected]; Department of Invertebrate Zoology, Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden, e-mail: [email protected] Keywords: Terrestrial Polychaeta, Parergodrilus heideri, Stygocapitella subterranea, Hrabeiella I8S rRNA periglandulata, gene, molecular phylogeny, rapid radiation Abstract Collectionof new specimens 130 DNA extraction, amplification and sequencing 130 Alignment To re-evaluate 130 the various hypotheses on the systematic position of Phylogenetic analyses 130 Parergodrilus heideri Reisinger, 1925 and Hrabeiella Results 132 periglandulata Pizl & Chalupský, 1984,the sole truly terrestrial Discussion 132 non-clitellateannelidsknown to date, their phylogenetic relation- ships Acknowledgements 136 were investigated using a data set of new 18S rDNA References 136 of sequences these and other five relevant annelid taxa, including an unknown of species Ctenodrilidae, as well as homologous sequences available for 18 already polychaetes, one aphano- neuran, 11 clitellates, two pogonophorans, one echiuran, one Introduction sipunculan, three molluscs and two arthropods. Two different alignments were constructed, according to analgorithmic method terrestrial forms constitute (Clustal Truly a tiny minority W) and on the basis of a secondary structure model non-clitellate annelids, (DCSE), A maximum parsimony analysis was performed with among only represented by arthropods asan unambiguous outgroup. -
Distribution, Abundance, and Diversity of Epifaunal Benthic Organisms in Alitak and Ugak Bays, Kodiak Island, Alaska
DISTRIBUTION, ABUNDANCE, AND DIVERSITY OF EPIFAUNAL BENTHIC ORGANISMS IN ALITAK AND UGAK BAYS, KODIAK ISLAND, ALASKA by Howard M. Feder and Stephen C. Jewett Institute of Marine Science University of Alaska Fairbanks, Alaska 99701 Final Report Outer Continental Shelf Environmental Assessment Program Research Unit 517 October 1977 279 We thank the following for assistance during this study: the crew of the MV Big Valley; Pete Jackson and James Blackburn of the Alaska Department of Fish and Game, Kodiak, for their assistance in a cooperative benthic trawl study; and University of Alaska Institute of Marine Science personnel Rosemary Hobson for assistance in data processing, Max Hoberg for shipboard assistance, and Nora Foster for taxonomic assistance. This study was funded by the Bureau of Land Management, Department of the Interior, through an interagency agreement with the National Oceanic and Atmospheric Administration, Department of Commerce, as part of the Alaska Outer Continental Shelf Environment Assessment Program (OCSEAP). SUMMARY OF OBJECTIVES, CONCLUSIONS, AND IMPLICATIONS WITH RESPECT TO OCS OIL AND GAS DEVELOPMENT Little is known about the biology of the invertebrate components of the shallow, nearshore benthos of the bays of Kodiak Island, and yet these components may be the ones most significantly affected by the impact of oil derived from offshore petroleum operations. Baseline information on species composition is essential before industrial activities take place in waters adjacent to Kodiak Island. It was the intent of this investigation to collect information on the composition, distribution, and biology of the epifaunal invertebrate components of two bays of Kodiak Island. The specific objectives of this study were: 1) A qualitative inventory of dominant benthic invertebrate epifaunal species within two study sites (Alitak and Ugak bays). -
Unit One Introduction to Marine Invertebrates
Unit One Introduction to Marine Invertebrates Activity 1 - Live Sea Animals . .3 Activity 2- Making an Undersea World . ..6 Objectives: To help students: Touch and identify common beach creatures such as sponges, jellyfishes, anemones, worms, crabs, barnacles, shrimps, amphipods, mollusks, sea stars, sea urchins and sea cucumbers (Activity 1). Understand the meaning of “invertebrate”: a soft-bodied animal without bones (Activity 1). Talk to a diver and/or marine biologist and observe their equipment (Activity 2). Decorate the classroom like an undersea world (Activity 2). Train “animals”(paper bag puppets) for an underwater circus (Activity 2). 1 . -- ., ., -<:.y:: ,.‘. :,” ; . .* . ‘. ..* 7 .*. ‘. ---=j.‘.’ : , ’ . UNIT ONE: Introduction to Marine Invertebrates. The ideal way to approach the study of invertebrates in all their diversity is through observation of live animals. All living things can be classified as belonging to either the plant Activity 1 kingdom orthe animal kingdom. Vertebrates and invertebrates are Live Sea Animals the two major subdivisions of the animal kingdom. Vertebrates are animals with backbones: humans, horses, elephants, mice, fishes, etc. Invertebrates are animals without backbones: sponges, sea stars,insects, worms, jellyfishes. Ninety-five percent of all animal species are invertebrates. There is a great assortment of colors, shapes and sizes among invertebrates found in Alaskan waters. Lacking backbones, they have various ways of supporting their bodies. Some,such as ane- 1 mones, rely on the water itself to give them shape and support. Sponges have a support system of Background: needlelike structures, which form In teaching children about marine entwining mesh. Crabs, an biology, nothing compares in shrimps,and beach hoppers have external skeletons, or “exoskele- excitement and value to the obser- vation of living creatures. -
Polychaete Worms Definitions and Keys to the Orders, Families and Genera
THE POLYCHAETE WORMS DEFINITIONS AND KEYS TO THE ORDERS, FAMILIES AND GENERA THE POLYCHAETE WORMS Definitions and Keys to the Orders, Families and Genera By Kristian Fauchald NATURAL HISTORY MUSEUM OF LOS ANGELES COUNTY In Conjunction With THE ALLAN HANCOCK FOUNDATION UNIVERSITY OF SOUTHERN CALIFORNIA Science Series 28 February 3, 1977 TABLE OF CONTENTS PREFACE vii ACKNOWLEDGMENTS ix INTRODUCTION 1 CHARACTERS USED TO DEFINE HIGHER TAXA 2 CLASSIFICATION OF POLYCHAETES 7 ORDERS OF POLYCHAETES 9 KEY TO FAMILIES 9 ORDER ORBINIIDA 14 ORDER CTENODRILIDA 19 ORDER PSAMMODRILIDA 20 ORDER COSSURIDA 21 ORDER SPIONIDA 21 ORDER CAPITELLIDA 31 ORDER OPHELIIDA 41 ORDER PHYLLODOCIDA 45 ORDER AMPHINOMIDA 100 ORDER SPINTHERIDA 103 ORDER EUNICIDA 104 ORDER STERNASPIDA 114 ORDER OWENIIDA 114 ORDER FLABELLIGERIDA 115 ORDER FAUVELIOPSIDA 117 ORDER TEREBELLIDA 118 ORDER SABELLIDA 135 FIVE "ARCHIANNELIDAN" FAMILIES 152 GLOSSARY 156 LITERATURE CITED 161 INDEX 180 Preface THE STUDY of polychaetes used to be a leisurely I apologize to my fellow polychaete workers for occupation, practised calmly and slowly, and introducing a complex superstructure in a group which the presence of these worms hardly ever pene- so far has been remarkably innocent of such frills. A trated the consciousness of any but the small group great number of very sound partial schemes have been of invertebrate zoologists and phylogenetlcists inter- suggested from time to time. These have been only ested in annulated creatures. This is hardly the case partially considered. The discussion is complex enough any longer. without the inclusion of speculations as to how each Studies of marine benthos have demonstrated that author would have completed his or her scheme, pro- these animals may be wholly dominant both in num- vided that he or she had had the evidence and inclina- bers of species and in numbers of specimens. -
An Annotated Checklist of the Marine Macroinvertebrates of Alaska David T
NOAA Professional Paper NMFS 19 An annotated checklist of the marine macroinvertebrates of Alaska David T. Drumm • Katherine P. Maslenikov Robert Van Syoc • James W. Orr • Robert R. Lauth Duane E. Stevenson • Theodore W. Pietsch November 2016 U.S. Department of Commerce NOAA Professional Penny Pritzker Secretary of Commerce National Oceanic Papers NMFS and Atmospheric Administration Kathryn D. Sullivan Scientific Editor* Administrator Richard Langton National Marine National Marine Fisheries Service Fisheries Service Northeast Fisheries Science Center Maine Field Station Eileen Sobeck 17 Godfrey Drive, Suite 1 Assistant Administrator Orono, Maine 04473 for Fisheries Associate Editor Kathryn Dennis National Marine Fisheries Service Office of Science and Technology Economics and Social Analysis Division 1845 Wasp Blvd., Bldg. 178 Honolulu, Hawaii 96818 Managing Editor Shelley Arenas National Marine Fisheries Service Scientific Publications Office 7600 Sand Point Way NE Seattle, Washington 98115 Editorial Committee Ann C. Matarese National Marine Fisheries Service James W. Orr National Marine Fisheries Service The NOAA Professional Paper NMFS (ISSN 1931-4590) series is pub- lished by the Scientific Publications Of- *Bruce Mundy (PIFSC) was Scientific Editor during the fice, National Marine Fisheries Service, scientific editing and preparation of this report. NOAA, 7600 Sand Point Way NE, Seattle, WA 98115. The Secretary of Commerce has The NOAA Professional Paper NMFS series carries peer-reviewed, lengthy original determined that the publication of research reports, taxonomic keys, species synopses, flora and fauna studies, and data- this series is necessary in the transac- intensive reports on investigations in fishery science, engineering, and economics. tion of the public business required by law of this Department.