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Aquatic and Wet Marchantiophyta, Order Metzgeriales: Aneuraceae
Glime, J. M. 2021. Aquatic and Wet Marchantiophyta, Order Metzgeriales: Aneuraceae. Chapt. 1-11. In: Glime, J. M. Bryophyte 1-11-1 Ecology. Volume 4. Habitat and Role. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 11 April 2021 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 1-11: AQUATIC AND WET MARCHANTIOPHYTA, ORDER METZGERIALES: ANEURACEAE TABLE OF CONTENTS SUBCLASS METZGERIIDAE ........................................................................................................................................... 1-11-2 Order Metzgeriales............................................................................................................................................................... 1-11-2 Aneuraceae ................................................................................................................................................................... 1-11-2 Aneura .......................................................................................................................................................................... 1-11-2 Aneura maxima ............................................................................................................................................................ 1-11-2 Aneura mirabilis .......................................................................................................................................................... 1-11-7 Aneura pinguis .......................................................................................................................................................... -
Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura Mirabilis
Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis Norman J. Wickett,* Yan Zhang, S. Kellon Hansen,à Jessie M. Roper,à Jennifer V. Kuehl,§ Sheila A. Plock, Paul G. Wolf,k Claude W. dePamphilis, Jeffrey L. Boore,§ and Bernard Goffinetà *Department of Ecology and Evolutionary Biology, University of Connecticut; Department of Biology, Penn State University; àGenome Project Solutions, Hercules, California; §Department of Energy Joint Genome Institute and University of California Lawrence Berkeley National Laboratory, Walnut Creek, California; and kDepartment of Biology, Utah State University Aneura mirabilis is a parasitic liverwort that exploits an existing mycorrhizal association between a basidiomycete and a host tree. This unusual liverwort is the only known parasitic seedless land plant with a completely nonphotosynthetic life history. The complete plastid genome of A. mirabilis was sequenced to examine the effect of its nonphotosynthetic life history on plastid genome content. Using a partial genomic fosmid library approach, the genome was sequenced and shown to be 108,007 bp with a structure typical of green plant plastids. Comparisons were made with the plastid genome of Marchantia polymorpha, the only other liverwort plastid sequence available. All ndh genes are either absent or pseudogenes. Five of 15 psb genes are pseudogenes, as are 2 of 6 psa genes and 2 of 6 pet genes. Pseudogenes of cysA, cysT, ccsA, and ycf3 were also detected. The remaining complement of genes present in M. polymorpha is present in the plastid of A. mirabilis with intact open reading frames. All pseudogenes and gene losses co-occur with losses detected in the plastid of the parasitic angiosperm Epifagus virginiana, though the latter has functional gene losses not found in A. -
Diversity and Roles of Mycorrhizal Fungi in the Bee Orchid Ophrys Apifera
Diversity and Roles of Mycorrhizal Fungi in the Bee Orchid Ophrys apifera By Wazeera Rashid Abdullah April 2018 A Thesis submitted to the University of Liverpool in fulfilment of the requirement for the degree of Doctor in Philosophy Table of Contents Page No. Acknowledgements ............................................................................................................. xiv Abbreviations ............................................................................ Error! Bookmark not defined. Abstract ................................................................................................................................... 2 1 Chapter one: Literature review: ........................................................................................ 3 1.1 Mycorrhiza: .................................................................................................................... 3 1.1.1Arbuscular mycorrhiza (AM) or Vesicular-arbuscular mycorrhiza (VAM): ........... 5 1.1.2 Ectomycorrhiza: ...................................................................................................... 5 1.1.3 Ectendomycorrhiza: ................................................................................................ 6 1.1.4 Ericoid mycorrhiza, Arbutoid mycorrhiza, and Monotropoid mycorrhiza: ............ 6 1.1.5 Orchid mycorrhiza: ................................................................................................. 7 1.1.5.1 Orchid mycorrhizal interaction: ...................................................................... -
Bryophyte Ecology Table of Contents
Glime, J. M. 2020. Table of Contents. Bryophyte Ecology. Ebook sponsored by Michigan Technological University 1 and the International Association of Bryologists. Last updated 15 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. This file will contain all the volumes, chapters, and headings within chapters to help you find what you want in the book. Once you enter a chapter, there will be a table of contents with clickable page numbers. To search the list, check the upper screen of your pdf reader for a search window or magnifying glass. If there is none, try Ctrl G to open one. TABLE OF CONTENTS BRYOPHYTE ECOLOGY VOLUME 1: PHYSIOLOGICAL ECOLOGY Chapter in Volume 1 1 INTRODUCTION Thinking on a New Scale Adaptations to Land Minimum Size Do Bryophytes Lack Diversity? The "Moss" What's in a Name? Phyla/Divisions Role of Bryology 2 LIFE CYCLES AND MORPHOLOGY 2-1: Meet the Bryophytes Definition of Bryophyte Nomenclature What Makes Bryophytes Unique Who are the Relatives? Two Branches Limitations of Scale Limited by Scale – and No Lignin Limited by Scale – Forced to Be Simple Limited by Scale – Needing to Swim Limited by Scale – and Housing an Embryo Higher Classifications and New Meanings New Meanings for the Term Bryophyte Differences within Bryobiotina 2-2: Life Cycles: Surviving Change The General Bryobiotina Life Cycle Dominant Generation The Life Cycle Life Cycle Controls Generation Time Importance Longevity and Totipotency 2-3: Marchantiophyta Distinguishing Marchantiophyta Elaters Leafy or Thallose? Class -
Downloads/figure(Reversal Cost).Svg 1/1
bioRxiv preprint doi: https://doi.org/10.1101/2021.02.08.430207; this version posted February 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. 1 Living apart if you can – how genetically and developmentally controlled sex has shaped the 2 evolution of liverworts 3 4 Xiaolan He1, Jorge R. Flores1, Yu Sun2, John L. Bowman3 5 6 1.Finnish Museum of Natural History, University of Helsinki, FI-00014, Helsinki, Finland 7 2. Lushan Botanical Garden, Chinese Academy of Sciences, Jiujiang, Jiangxi 332900, China 8 3. School of Biological Science, Monash University, Melbourne VIC 3800, Australia 9 10 11 12 Abstract 13 Sexual differentiation in bryophytes occurs in the dominant gametophytic generation. Over half of 14 bryophytes are dioicous, and this pattern in liverworts is even more profound as over 70% of 15 species are dioicous. However, the evolutionary mechanisms leading to the prevalence of dioicy 16 and the shifts of sexual systems between dioicy and monoicy have remained poorly known. These 17 essential factors in reproductive biology are explored here in light of phylogenetics combined with 18 evidence of genomic characterization of sex chromosomes and sex-determination, as well as 19 cytology. Our analyses and discussions on liverworts are focused on: (1) ancestry and shifts in 20 sexuality, (2) evolution of sex chromosomes and maintenance of haploid dioicy, and (3) 21 environmental impact on the evolution of monoicism. -
Sites of Importance for Nature Conservation Wales Guidance (Pdf)
Wildlife Sites Guidance Wales A Guide to Develop Local Wildlife Systems in Wales Wildlife Sites Guidance Wales A Guide to Develop Local Wildlife Systems in Wales Foreword The Welsh Assembly Government’s Environment Strategy for Wales, published in May 2006, pays tribute to the intrinsic value of biodiversity – ‘the variety of life on earth’. The Strategy acknowledges the role biodiversity plays, not only in many natural processes, but also in the direct and indirect economic, social, aesthetic, cultural and spiritual benefits that we derive from it. The Strategy also acknowledges that pressures brought about by our own actions and by other factors, such as climate change, have resulted in damage to the biodiversity of Wales and calls for a halt to this loss and for the implementation of measures to bring about a recovery. Local Wildlife Sites provide essential support between and around our internationally and nationally designated nature sites and thus aid our efforts to build a more resilient network for nature in Wales. The Wildlife Sites Guidance derives from the shared knowledge and experience of people and organisations throughout Wales and beyond and provides a common point of reference for the most effective selection of Local Wildlife Sites. I am grateful to the Wales Biodiversity Partnership for developing the Wildlife Sites Guidance. The contribution and co-operation of organisations and individuals across Wales are vital to achieving our biodiversity targets. I hope that you will find the Wildlife Sites Guidance a useful tool in the battle against biodiversity loss and that you will ensure that it is used to its full potential in order to derive maximum benefit for the vitally important and valuable nature in Wales. -
From Roots of Encyclia Tampensis in South
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica Zettler, Lawawrence W.; Corey, Laura L.; Jacks, Alishia L.; Gruender, Luke T.; Lopez, Alyssa M. TULASNELLA IRREGULARIS (BASIDIOMYCOTA: TULASNELLACEAE) FROM ROOTS OF ENCYCLIA TAMPENSIS IN SOUTH FLORIDA, AND CONFIRMATION OF ITS MYCORRHIZAL SIGNIFICANCE THROUGH SYMBIOTIC SEED GERMINATION Lankesteriana International Journal on Orchidology, vol. 13, núm. 1-2, agosto, 2013, pp. 119-128 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44340043013 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 13(1–2): 119—128. 2013. TULASNELLA IRREGULARIS (BASIDIOMYCOTA: TULASNELLACEAE) FROM ROOTS OF ENCYCLIA TAMPENSIS IN SOUTH FLORIDA, AND CONFIRMATION OF ITS MYCORRHIZAL SIGNIFICANCE THROUGH SYMBIOTIC SEED GERMINATION LawRENCE W. ZETTLER*, LAURA L. COREY, ALISHIA L. JACKS, LUKE T. GRUENDER & ALYSSA M. LOPEZ Department of Biology, Illinois College, 1101 West College Avenue, Jacksonville, IL 62650, U.S.A. *Author for correspondence: [email protected] ABSTRACT. Epiphytic orchids remain understudied with respect to their obligate mycorrhizal relationships – a key component of the integrated conservation model. Existing studies have revealed that these plants, like their terrestrial counterparts, commonly associate with ubiquitous basidiomycetes (e.g., Tulasnellaceae); however, few studies have verified their physiological role(s). Two strains of mycorrhizal fungi (UAMH 11541, UAMH 11543) were isolated from roots of an epiphytic orchid in south Florida, Encyclia tampensis; one was acquired from a seedling and one from a mature specimen. -
Orchidaceae) in the Central Highlands of Madagascar
microorganisms Article Fungal Diversity of Selected Habitat Specific Cynorkis Species (Orchidaceae) in the Central Highlands of Madagascar Kazutomo Yokoya 1, Alison S. Jacob 1, Lawrence W. Zettler 2 , Jonathan P. Kendon 1, Manoj Menon 3 , Jake Bell 1, Landy Rajaovelona 1 and Viswambharan Sarasan 1,* 1 Royal Botanic Gardens Kew, Richmond, Surrey TW9 3DS, UK; [email protected] (K.Y.); [email protected] (A.S.J.); [email protected] (J.P.K.); [email protected] (J.B.); [email protected] (L.R.) 2 Department of Biology, Illinois College, Jacksonville, IL 62650-2299, USA; [email protected] 3 Department of Geography, University of Sheffield, Sheffield S10 2TN, UK; m.menon@sheffield.ac.uk * Correspondence: [email protected] Abstract: About 90% of Cynorkis species are endemic to the biodiversity hotspot of Madagascar. This terrestrial habitat-specific genus received little study for fungal diversity to support conservation. We evaluated the diversity of culturable fungi of 11 species and soil characteristics from six sites spanning a >40 km radius in and along the region’s inselbergs. Peloton-forming fungi were grown in vitro from root/protocorm slices and positively identified using DNA sequencing. The fungal diversity - was then correlated with soil pH, NO3 N, P, and K. All species harbored either putative mycorrhizal associates in the Rhizoctonia complex or Hypocreales fungi. Tulasnella Operational Taxonomic Units (OTUs) were most prevalent in all soil types while Serendipita OTUs were found in species inhabiting Citation: Yokoya, K.; Jacob, A.S.; granite/rock outcrops in moist soil (seepage areas). Most Cynorkis species were present in soil with Zettler, L.W.; Kendon, J.P.; Menon, M.; low NO -N and P levels with diversity of mycorrhizal fungi inversely correlated to NO -N levels. -
Aneuraceae, Marchantiophytina)
European Journal of Taxonomy 273: 1–26 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2017.273 www.europeanjournaloftaxonomy.eu 2017 · Rabeau L. et al. This work is licensed under a Creative Commons Attribution 3.0 License. DNA Library of Life, research article New insights into the phylogeny and relationships within the worldwide genus Riccardia (Aneuraceae, Marchantiophytina) Lucile RABEAU 1,*, S. Robbert GRADSTEIN 2, Jean-Yves DUBUISSON 3, Martin NEBEL 4, Dietmar QUANDT 5 & Catherine REEB 6 1,2,3,6 Université Pierre et Marie Curie – Sorbonne Universités – Institut de Systématique, Évolution, Biodiversité, ISYEB, UMR 7205, CNRS-MNHN-UPMC-EPHE, Muséum national d’Histoire naturelle, 57 rue Cuvier, CP 39, 75005 Paris, France. 4 Staatliches Museum für Naturkunde Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany. 5 Nees-Institut für Biodiversität der Pfl anzen, Rheinische Friedrich-Wilhelms-Universität Bonn, Meckenheimer Allee 170, 53115 Bonn, Germany. * Corresponding author: [email protected] 2 Email: [email protected] 3 Email: [email protected] 4 Email: [email protected] 5 Email: [email protected] 6 Email: [email protected] Abstract. With 280 accepted species, the genus Riccardia S.F.Gray (Aneuraceae) is one of the most speciose genera of simple thalloid liverworts. The current classifi cation of this genus is based on morphological and limited-sampling molecular studies. Very few molecular data are available and a comprehensive view of evolutionary relationships within the genus is still lacking. A phylogeny focusing on relationships within the large genus Riccardia has not been conducted. Here we propose the fi rst worldwide molecular phylogeny of the genus Riccardia, based on Bayesian inference and parsimony ratchet analyses of sequences from three plastid regions (psbA-trnH, rps4, trnL-F). -
How Understand Cryptogams? the Development of Research Methods and Their Impact on the Knowledge of Cryptogams
How understand cryptogams? The development of research methods and their impact on the knowledge of cryptogams A tribute to Josef POELT Franz OBERWINKLER*1 Abstract: This article intends to shed light on increasing knowledge of cryptogam biology over 400 years of research. The progress in biological disciplines involved, is tightly bound to new research methods. Starting with recognizing algae, mosses, ferns, and fungi in the field, collecting and identifying them was a consequence. It required classifi- cations for handling the rapidly growing number of species. Soon, it became apparent that lightmicrocopy was an indispensable method of all kinds of cryptogam studies, especially for elucidating their cellular constructions, an essential basis for studying their functions. Electron microscopy broke down the limitations of magnification and resolution in light microscopy. The detection and understanding of subcellular structures revolutionized bio- logy as such, and that of cryptogams in particular. Now, physiological studies with chemi- cal and physicochemical methods of earlier days could be coupled more and more with structural characters of cell organelles. Increasing knowledge on metabolisms and appli- cable products strengthened efforts in biotechnology and led to new industrial disciplines. Surprisingly, sequencing techniques of nucleic acids were essentially developed in biolo- gy and not in chemistry. Their rapidly spreading application to all kinds of organisms, in- cluding cryptogams, is unique and marks a most revolutionary period in biology. It covers now developmental, metabolic, ecological, and evolutionary studies, and dominates biolo- gical research to a very high percentage. The mass of data produced since then, increasing continously, requires bioinformatics as an additional discipline in biology. -
The Bryological Times Number 126 November 2008
______________________________________________________________________________________________________ The Bryological Times Number 126 November 2008 Newsletter of the International Association of Bryologists CONTENT IAB News • The IAB-congress 2009 in South Africa: an update ...................................................................................... 2 • Stanley W. Greene Award: call for proposals ............................................................................................... 2 • The IAB seeks new candidates and active collaborators ............................................................................. 2 Personal News ....................................................................................................................................................... 3 Field Research News • Post IAB 2007 conference field trip to the Cameron Highlands ................................................................... 3 Research Reports • Bryolat project ................................................................................................................................................... 5 • Herbarium news from Michigan ...................................................................................................................... 5 Theses in bryology ................................................................................................................................................. 6 Bryological exhibition ........................................................................................................................................... -
Biogeography and Ecology of Tulasnellaceae
Chapter 12 Biogeography and Ecology of Tulasnellaceae Franz Oberwinkler, Darı´o Cruz, and Juan Pablo Sua´rez 12.1 Introduction Schroter€ (1888) introduced the name Tulasnella in honour of the French physicians, botanists and mycologists Charles and Louis Rene´ Tulasne for heterobasidiomycetous fungi with unique meiosporangial morphology. The place- ment in the Heterobasidiomycetes was accepted by Rogers (1933), and later also by Donk (1972). In Talbot’s conspectus of basidiomycetes genera (Talbot 1973), the genus represented an order, the Tulasnellales, in the Holobasidiomycetidae, a view not accepted by Bandoni and Oberwinkler (1982). In molecular phylogenetic studies, Tulasnellaceae were included in Cantharellales (Hibbett and Thorn 2001), a position that was confirmed by following studies, e.g. Hibbett et al. (2007, 2014). 12.2 Systematics and Taxonomy Most tulasnelloid fungi produce basidiomata on wood, predominantly on the underside of fallen logs and twigs. Reports on these collections are mostly published in local floras, mycofloristic listings, or partial monographic treatments. F. Oberwinkler (*) Institut für Evolution und O¨ kologie, Universita¨tTübingen, Auf der Morgenstelle 1, 72076 Tübingen, Germany e-mail: [email protected] D. Cruz • J.P. Sua´rez Museum of Biological Collections, Section of Basic and Applied Biology, Department of Natural Sciences, Universidad Te´cnica Particular de Loja, San Cayetano Alto s/n C.P, 11 01 608 Loja, Ecuador © Springer International Publishing AG 2017 237 L. Tedersoo (ed.), Biogeography of Mycorrhizal Symbiosis, Ecological Studies 230, DOI 10.1007/978-3-319-56363-3_12 238 F. Oberwinkler et al. Unfortunately, the ecological relevance of Tulasnella fruiting on variously decayed wood or on bark of trees is not understood.