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Translocation and Transport
Glime, J. M. 2017. Nutrient Relations: Translocation and Transport. Chapt. 8-5. In: Glime, J. M. Bryophyte Ecology. Volume 1. 8-5-1 Physiological Ecology. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 17 July 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 8-5 NUTRIENT RELATIONS: TRANSLOCATION AND TRANSPORT TABLE OF CONTENTS Translocation and Transport ................................................................................................................................ 8-5-2 Movement from Older to Younger Tissues .................................................................................................. 8-5-6 Directional Differences ................................................................................................................................ 8-5-8 Species Differences ...................................................................................................................................... 8-5-8 Mechanisms of Transport .................................................................................................................................... 8-5-9 Source to Sink? ............................................................................................................................................ 8-5-9 Enrichment Effects ..................................................................................................................................... 8-5-10 Internal Transport -
Phytotaxa, a Synthesis of Hornwort Diversity
Phytotaxa 9: 150–166 (2010) ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ Article PHYTOTAXA Copyright © 2010 • Magnolia Press ISSN 1179-3163 (online edition) A synthesis of hornwort diversity: Patterns, causes and future work JUAN CARLOS VILLARREAL1 , D. CHRISTINE CARGILL2 , ANDERS HAGBORG3 , LARS SÖDERSTRÖM4 & KAREN SUE RENZAGLIA5 1Department of Ecology and Evolutionary Biology, University of Connecticut, 75 North Eagleville Road, Storrs, CT 06269; [email protected] 2Centre for Plant Biodiversity Research, Australian National Herbarium, Australian National Botanic Gardens, GPO Box 1777, Canberra. ACT 2601, Australia; [email protected] 3Department of Botany, The Field Museum, 1400 South Lake Shore Drive, Chicago, IL 60605-2496; [email protected] 4Department of Biology, Norwegian University of Science and Technology, N-7491 Trondheim, Norway; [email protected] 5Department of Plant Biology, Southern Illinois University, Carbondale, IL 62901; [email protected] Abstract Hornworts are the least species-rich bryophyte group, with around 200–250 species worldwide. Despite their low species numbers, hornworts represent a key group for understanding the evolution of plant form because the best–sampled current phylogenies place them as sister to the tracheophytes. Despite their low taxonomic diversity, the group has not been monographed worldwide. There are few well-documented hornwort floras for temperate or tropical areas. Moreover, no species level phylogenies or population studies are available for hornworts. Here we aim at filling some important gaps in hornwort biology and biodiversity. We provide estimates of hornwort species richness worldwide, identifying centers of diversity. We also present two examples of the impact of recent work in elucidating the composition and circumscription of the genera Megaceros and Nothoceros. -
Plant Evolution an Introduction to the History of Life
Plant Evolution An Introduction to the History of Life KARL J. NIKLAS The University of Chicago Press Chicago and London CONTENTS Preface vii Introduction 1 1 Origins and Early Events 29 2 The Invasion of Land and Air 93 3 Population Genetics, Adaptation, and Evolution 153 4 Development and Evolution 217 5 Speciation and Microevolution 271 6 Macroevolution 325 7 The Evolution of Multicellularity 377 8 Biophysics and Evolution 431 9 Ecology and Evolution 483 Glossary 537 Index 547 v Introduction The unpredictable and the predetermined unfold together to make everything the way it is. It’s how nature creates itself, on every scale, the snowflake and the snowstorm. — TOM STOPPARD, Arcadia, Act 1, Scene 4 (1993) Much has been written about evolution from the perspective of the history and biology of animals, but significantly less has been writ- ten about the evolutionary biology of plants. Zoocentricism in the biological literature is understandable to some extent because we are after all animals and not plants and because our self- interest is not entirely egotistical, since no biologist can deny the fact that animals have played significant and important roles as the actors on the stage of evolution come and go. The nearly romantic fascination with di- nosaurs and what caused their extinction is understandable, even though we should be equally fascinated with the monarchs of the Carboniferous, the tree lycopods and calamites, and with what caused their extinction (fig. 0.1). Yet, it must be understood that plants are as fascinating as animals, and that they are just as important to the study of biology in general and to understanding evolutionary theory in particular. -
Number of Living Species in Australia and the World
Numbers of Living Species in Australia and the World 2nd edition Arthur D. Chapman Australian Biodiversity Information Services australia’s nature Toowoomba, Australia there is more still to be discovered… Report for the Australian Biological Resources Study Canberra, Australia September 2009 CONTENTS Foreword 1 Insecta (insects) 23 Plants 43 Viruses 59 Arachnida Magnoliophyta (flowering plants) 43 Protoctista (mainly Introduction 2 (spiders, scorpions, etc) 26 Gymnosperms (Coniferophyta, Protozoa—others included Executive Summary 6 Pycnogonida (sea spiders) 28 Cycadophyta, Gnetophyta under fungi, algae, Myriapoda and Ginkgophyta) 45 Chromista, etc) 60 Detailed discussion by Group 12 (millipedes, centipedes) 29 Ferns and Allies 46 Chordates 13 Acknowledgements 63 Crustacea (crabs, lobsters, etc) 31 Bryophyta Mammalia (mammals) 13 Onychophora (velvet worms) 32 (mosses, liverworts, hornworts) 47 References 66 Aves (birds) 14 Hexapoda (proturans, springtails) 33 Plant Algae (including green Reptilia (reptiles) 15 Mollusca (molluscs, shellfish) 34 algae, red algae, glaucophytes) 49 Amphibia (frogs, etc) 16 Annelida (segmented worms) 35 Fungi 51 Pisces (fishes including Nematoda Fungi (excluding taxa Chondrichthyes and (nematodes, roundworms) 36 treated under Chromista Osteichthyes) 17 and Protoctista) 51 Acanthocephala Agnatha (hagfish, (thorny-headed worms) 37 Lichen-forming fungi 53 lampreys, slime eels) 18 Platyhelminthes (flat worms) 38 Others 54 Cephalochordata (lancelets) 19 Cnidaria (jellyfish, Prokaryota (Bacteria Tunicata or Urochordata sea anenomes, corals) 39 [Monera] of previous report) 54 (sea squirts, doliolids, salps) 20 Porifera (sponges) 40 Cyanophyta (Cyanobacteria) 55 Invertebrates 21 Other Invertebrates 41 Chromista (including some Hemichordata (hemichordates) 21 species previously included Echinodermata (starfish, under either algae or fungi) 56 sea cucumbers, etc) 22 FOREWORD In Australia and around the world, biodiversity is under huge Harnessing core science and knowledge bases, like and growing pressure. -
Lessons from 20 Years of Plant Genome Sequencing: an Unprecedented Resource in Need of More Diverse Representation
bioRxiv preprint doi: https://doi.org/10.1101/2021.05.31.446451; this version posted May 31, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Lessons from 20 years of plant genome sequencing: an unprecedented resource in need of more diverse representation Authors: Rose A. Marks1,2,3, Scott Hotaling4, Paul B. Frandsen5,6, and Robert VanBuren1,2 1. Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA 2. Plant Resilience Institute, Michigan State University, East Lansing, MI 48824, USA 3. Department of Molecular and Cell Biology, University of Cape Town, Rondebosch 7701, South Africa 4. School of Biological Sciences, Washington State University, Pullman, WA, USA 5. Department of Plant and Wildlife Sciences, Brigham Young University, Provo, UT, USA 6. Data Science Lab, Smithsonian Institution, Washington, DC, USA Keywords: plants, embryophytes, genomics, colonialism, broadening participation Correspondence: Rose A. Marks, Department of Horticulture, Michigan State University, East Lansing, MI 48824, USA; Email: [email protected]; Phone: (603) 852-3190; ORCID iD: https://orcid.org/0000-0001-7102-5959 Abstract The field of plant genomics has grown rapidly in the past 20 years, leading to dramatic increases in both the quantity and quality of publicly available genomic resources. With an ever- expanding wealth of genomic data from an increasingly diverse set of taxa, unprecedented potential exists to better understand the evolution and genome biology of plants. -
Anthocerotophyta
Glime, J. M. 2017. Anthocerotophyta. Chapt. 2-8. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. Ebook 2-8-1 sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 5 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-8 ANTHOCEROTOPHYTA TABLE OF CONTENTS Anthocerotophyta ......................................................................................................................................... 2-8-2 Summary .................................................................................................................................................... 2-8-10 Acknowledgments ...................................................................................................................................... 2-8-10 Literature Cited .......................................................................................................................................... 2-8-10 2-8-2 Chapter 2-8: Anthocerotophyta CHAPTER 2-8 ANTHOCEROTOPHYTA Figure 1. Notothylas orbicularis thallus with involucres. Photo by Michael Lüth, with permission. Anthocerotophyta These plants, once placed among the bryophytes in the families. The second class is Leiosporocerotopsida, a Anthocerotae, now generally placed in the phylum class with one order, one family, and one genus. The genus Anthocerotophyta (hornworts, Figure 1), seem more Leiosporoceros differs from members of the class distantly related, and genetic evidence may even present -
Fossil Mosses: What Do They Tell Us About Moss Evolution?
Bry. Div. Evo. 043 (1): 072–097 ISSN 2381-9677 (print edition) DIVERSITY & https://www.mapress.com/j/bde BRYOPHYTEEVOLUTION Copyright © 2021 Magnolia Press Article ISSN 2381-9685 (online edition) https://doi.org/10.11646/bde.43.1.7 Fossil mosses: What do they tell us about moss evolution? MicHAEL S. IGNATOV1,2 & ELENA V. MASLOVA3 1 Tsitsin Main Botanical Garden of the Russian Academy of Sciences, Moscow, Russia 2 Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia 3 Belgorod State University, Pobedy Square, 85, Belgorod, 308015 Russia �[email protected], https://orcid.org/0000-0003-1520-042X * author for correspondence: �[email protected], https://orcid.org/0000-0001-6096-6315 Abstract The moss fossil records from the Paleozoic age to the Eocene epoch are reviewed and their putative relationships to extant moss groups discussed. The incomplete preservation and lack of key characters that could define the position of an ancient moss in modern classification remain the problem. Carboniferous records are still impossible to refer to any of the modern moss taxa. Numerous Permian protosphagnalean mosses possess traits that are absent in any extant group and they are therefore treated here as an extinct lineage, whose descendants, if any remain, cannot be recognized among contemporary taxa. Non-protosphagnalean Permian mosses were also fairly diverse, representing morphotypes comparable with Dicranidae and acrocarpous Bryidae, although unequivocal representatives of these subclasses are known only since Cretaceous and Jurassic. Even though Sphagnales is one of two oldest lineages separated from the main trunk of moss phylogenetic tree, it appears in fossil state regularly only since Late Cretaceous, ca. -
Introduction to Common Native & Invasive Freshwater Plants in Alaska
Introduction to Common Native & Potential Invasive Freshwater Plants in Alaska Cover photographs by (top to bottom, left to right): Tara Chestnut/Hannah E. Anderson, Jamie Fenneman, Vanessa Morgan, Dana Visalli, Jamie Fenneman, Lynda K. Moore and Denny Lassuy. Introduction to Common Native & Potential Invasive Freshwater Plants in Alaska This document is based on An Aquatic Plant Identification Manual for Washington’s Freshwater Plants, which was modified with permission from the Washington State Department of Ecology, by the Center for Lakes and Reservoirs at Portland State University for Alaska Department of Fish and Game US Fish & Wildlife Service - Coastal Program US Fish & Wildlife Service - Aquatic Invasive Species Program December 2009 TABLE OF CONTENTS TABLE OF CONTENTS Acknowledgments ............................................................................ x Introduction Overview ............................................................................. xvi How to Use This Manual .................................................... xvi Categories of Special Interest Imperiled, Rare and Uncommon Aquatic Species ..................... xx Indigenous Peoples Use of Aquatic Plants .............................. xxi Invasive Aquatic Plants Impacts ................................................................................. xxi Vectors ................................................................................. xxii Prevention Tips .................................................... xxii Early Detection and Reporting -
Spore Dispersal Vectors
Glime, J. M. 2017. Adaptive Strategies: Spore Dispersal Vectors. Chapt. 4-9. In: Glime, J. M. Bryophyte Ecology. Volume 1. 4-9-1 Physiological Ecology. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 3 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 4-9 ADAPTIVE STRATEGIES: SPORE DISPERSAL VECTORS TABLE OF CONTENTS Dispersal Types ............................................................................................................................................ 4-9-2 Wind Dispersal ............................................................................................................................................. 4-9-2 Splachnaceae ......................................................................................................................................... 4-9-4 Liverworts ............................................................................................................................................. 4-9-5 Invasive Species .................................................................................................................................... 4-9-5 Decay Dispersal............................................................................................................................................ 4-9-6 Animal Dispersal .......................................................................................................................................... 4-9-9 Earthworms .......................................................................................................................................... -
The Supramolecular Organization of Self-Assembling Chlorosomal Bacteriochlorophyll C, D,Ore Mimics
The supramolecular organization of self-assembling chlorosomal bacteriochlorophyll c, d,ore mimics Tobias Jochum*†, Chilla Malla Reddy†‡, Andreas Eichho¨ fer‡, Gernot Buth*, Je¸drzej Szmytkowski§¶, Heinz Kalt§¶, David Moss*, and Teodor Silviu Balaban‡¶ʈ *Institute for Synchrotron Radiation, Karlsruhe Institute of Technology, Forschungszentrum Karlsruhe, Postfach 3640, D-76021 Karlsruhe, Germany; ‡Institute for Nanotechnology, Karlsruhe Institute of Technology, Forschungszentrum Karlsruhe, Postfach 3640, D-76021 Karlsruhe, Germany; §Institute of Applied Physics, Karlsruhe Institute of Technology, Universita¨t Karlsruhe (TH), D-76131 Karslruhe, Germany; and ¶Center for Functional Nanostructures, Universita¨t Karlsruhe (TH), D-76131 Karslruhe, Germany Edited by James R. Norris, University of Chicago, Chicago, IL, and accepted by the Editorial Board July 18, 2008 (received for review March 22, 2008) Bacteriochlorophylls (BChls) c, d, and e are the main light-harvesting direct structural evidence from x-ray single crystal structures, the pigments of green photosynthetic bacteria that self-assemble into exact nature of BChl superstructures remain elusive and these nanostructures within the chlorosomes forming the most efficient have been controversially discussed in the literature (1–3, 7, antennas of photosynthetic organisms. All previous models of the 11–17). It is now generally accepted that the main feature of chlorosomal antennae, which are quite controversially discussed chlorosomes is the self-assembly of BChls and that these pig- because no single crystals could be grown so far from these or- ments are not bound by a rigid protein matrix as is the case of ganelles, involve a strong hydrogen-bonding interaction between the other, well characterized light-harvesting systems (1). Small- 31 hydroxyl group and the 131 carbonyl group. -
Prescribed Fire Decreases Lichen and Bryophyte Biomass and Alters Functional Group Composition in Pacific Northwest Prairies Author(S): Lalita M
Prescribed Fire Decreases Lichen and Bryophyte Biomass and Alters Functional Group Composition in Pacific Northwest Prairies Author(s): Lalita M. Calabria, Kate Petersen, Sarah T. Hamman and Robert J. Smith Source: Northwest Science, 90(4):470-483. Published By: Northwest Scientific Association DOI: http://dx.doi.org/10.3955/046.090.0407 URL: http://www.bioone.org/doi/full/10.3955/046.090.0407 BioOne (www.bioone.org) is a nonprofit, online aggregation of core research in the biological, ecological, and environmental sciences. BioOne provides a sustainable online platform for over 170 journals and books published by nonprofit societies, associations, museums, institutions, and presses. Your use of this PDF, the BioOne Web site, and all posted and associated content indicates your acceptance of BioOne’s Terms of Use, available at www.bioone.org/page/terms_of_use. Usage of BioOne content is strictly limited to personal, educational, and non-commercial use. Commercial inquiries or rights and permissions requests should be directed to the individual publisher as copyright holder. BioOne sees sustainable scholarly publishing as an inherently collaborative enterprise connecting authors, nonprofit publishers, academic institutions, research libraries, and research funders in the common goal of maximizing access to critical research. Lalita M. Calabria1, Kate Petersen,The Evergreen State College, 2700 Evergreen Parkway NW, Olympia, Washington 98505 Sarah T. Hamman, The Center for Natural Lands Management, 120 Union Ave SE #215, Olympia, Washington 98501 and Robert J. Smith, Department of Botany and Plant Pathology, 2082 Cordley Hall, Oregon State University, Corvallis, Oregon 97331 Prescribed Fire Decreases Lichen and Bryophyte Biomass and Alters Functional Group Composition in Pacific Northwest Prairies Abstract The reintroduction of fire to Pacific Northwest prairies has been useful for removing non-native shrubs and supporting habitat for fire-adapted plant and animal species. -
Cycad Forensics: Tracing the Origin of Poached Cycads Using Stable Isotopes, Trace Element Concentrations and Radiocarbon Dating Techniques
Cycad forensics: Tracing the origin of poached cycads using stable isotopes, trace element concentrations and radiocarbon dating techniques by Kirsten Retief Supervisors: Dr Adam West (UCT) and Ms Michele Pfab (SANBI) Submitted in partial fulfillment of the requirements for the degree of Masters of Science in Conservation Biology 5 June 2013 Percy FitzPatrick Institution of African Ornithology, UniversityDepartment of Biologicalof Cape Sciences Town University of Cape Town, Rondebosch Cape Town South Africa 7701 i The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town Table of Contents Acknowledgements iii Plagiarism declaration iv Abstract v Chapter 1: Status of cycads and background to developing a forensic technique 1 1. Why are cycads threatened? 2 2. Importance of cycads 4 3. Current conservation strategies 5 4. Stable isotopes in forensic science 7 5. Trace element concentrations 15 6. Principles for using isotopes as a tracer 15 7. Radiocarbon dating 16 8. Cycad life history, anatomy and age of tissues 18 9. Recapitulation 22 Chapter 2: Applying stable isotope and radiocarbon dating techniques to cycads 23 1. Introduction 24 2. Methods 26 2.1 Sampling selection and sites 26 2.2 Sampling techniques 30 2.3 Processing samples 35 2.4 Cellulose extraction 37 2.5 Oxygen and sulphur stable isotopes 37 2.6 CarbonUniversity and nitrogen stable of isotopes Cape Town 38 2.7 Strontium, lead and elemental concentration analysis 39 2.8 Radiocarbon dating 41 2.9 Data analysis 42 3.