The Monkey in the Town's Commons: a Natural History of the Indian
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Rhesus Macaque Sequencing
White Paper for Complete Sequencing of the Rhesus Macaque (Macaca mulatta) Genome Jeffrey Rogers1, Michael Katze 2, Roger Bumgarner2, Richard A. Gibbs 3 and George M. Weinstock3 I. Introduction Humans are members of the Order Primates and our closest evolutionary relatives are other primate species. This makes primate models of human disease particularly important, as the underlying physiology and metabolism, as well as genomic structure, are more similar to humans than are other mammals. Chimpanzees (Pan troglodytes) are the animals most similar to humans in overall DNA sequence, with interspecies sequence differences of approximately 1- 1.5% (Stewart and Disotell 1998, Page and Goodman 2001). The other apes, including gorillas and orangutans are nearly as similar to humans. The animals next most closely related to humans are Old World monkeys, superfamily Cercopithecoidea. This group includes the common laboratory species of rhesus macaque (Macaca mulatta), baboon (Papio hamadryas), pig-tailed macaque (Macaca nemestrina) and African green monkey (Chlorocebus aethiops). The human evolutionary lineage separated from the ancestors of chimpanzees about 6-7 million years ago (MYA), while the human/ape lineage diverged from Old World monkeys about 25 MYA (Stewart and Disotell 1998), and from another important primate group, the New World monkeys, more than 35-40 MYA. In comparison, humans diverged from mice and other non- primate mammals about 65-85 MYA (Kumar and Hedges 1998, Eizirik et al 2001). In the evaluation of primate candidates for genome sequencing there should be more to selection of an organism than evolutionary considerations. The chimpanzee’s status as Closest Relative To Human has earned it an exemption from this consideration. -
The Taxonomy of Primates in the Laboratory Context
P0800261_01 7/14/05 8:00 AM Page 3 C HAPTER 1 The Taxonomy of Primates T HE T in the Laboratory Context AXONOMY OF P Colin Groves RIMATES School of Archaeology and Anthropology, Australian National University, Canberra, ACT 0200, Australia 3 What are species? D Taxonomy: EFINITION OF THE The biological Organizing nature species concept Taxonomy means classifying organisms. It is nowadays commonly used as a synonym for systematics, though Disagreement as to what precisely constitutes a species P strictly speaking systematics is a much broader sphere is to be expected, given that the concept serves so many RIMATE of interest – interrelationships, and biodiversity. At the functions (Vane-Wright, 1992). We may be interested basis of taxonomy lies that much-debated concept, the in classification as such, or in the evolutionary implica- species. tions of species; in the theory of species, or in simply M ODEL Because there is so much misunderstanding about how to recognize them; or in their reproductive, phys- what a species is, it is necessary to give some space to iological, or husbandry status. discussion of the concept. The importance of what we Most non-specialists probably have some vague mean by the word “species” goes way beyond taxonomy idea that species are defined by not interbreeding with as such: it affects such diverse fields as genetics, biogeog- each other; usually, that hybrids between different species raphy, population biology, ecology, ethology, and bio- are sterile, or that they are incapable of hybridizing at diversity; in an era in which threats to the natural all. Such an impression ultimately derives from the def- world and its biodiversity are accelerating, it affects inition by Mayr (1940), whereby species are “groups of conservation strategies (Rojas, 1992). -
The Behavioral Ecology of the Tibetan Macaque
Fascinating Life Sciences Jin-Hua Li · Lixing Sun Peter M. Kappeler Editors The Behavioral Ecology of the Tibetan Macaque Fascinating Life Sciences This interdisciplinary series brings together the most essential and captivating topics in the life sciences. They range from the plant sciences to zoology, from the microbiome to macrobiome, and from basic biology to biotechnology. The series not only highlights fascinating research; it also discusses major challenges associ- ated with the life sciences and related disciplines and outlines future research directions. Individual volumes provide in-depth information, are richly illustrated with photographs, illustrations, and maps, and feature suggestions for further reading or glossaries where appropriate. Interested researchers in all areas of the life sciences, as well as biology enthu- siasts, will find the series’ interdisciplinary focus and highly readable volumes especially appealing. More information about this series at http://www.springer.com/series/15408 Jin-Hua Li • Lixing Sun • Peter M. Kappeler Editors The Behavioral Ecology of the Tibetan Macaque Editors Jin-Hua Li Lixing Sun School of Resources Department of Biological Sciences, Primate and Environmental Engineering Behavior and Ecology Program Anhui University Central Washington University Hefei, Anhui, China Ellensburg, WA, USA International Collaborative Research Center for Huangshan Biodiversity and Tibetan Macaque Behavioral Ecology Anhui, China School of Life Sciences Hefei Normal University Hefei, Anhui, China Peter M. Kappeler Behavioral Ecology and Sociobiology Unit, German Primate Center Leibniz Institute for Primate Research Göttingen, Germany Department of Anthropology/Sociobiology University of Göttingen Göttingen, Germany ISSN 2509-6745 ISSN 2509-6753 (electronic) Fascinating Life Sciences ISBN 978-3-030-27919-6 ISBN 978-3-030-27920-2 (eBook) https://doi.org/10.1007/978-3-030-27920-2 This book is an open access publication. -
A Stepwise Male Introduction Procedure to Prevent Inbreeding in Naturalistic Macaque Breeding Groups
animals Article A Stepwise Male Introduction Procedure to Prevent Inbreeding in Naturalistic Macaque Breeding Groups Astrid Rox 1,2, André H. van Vliet 1, Jan A. M. Langermans 1,3,* , Elisabeth H. M. Sterck 1,2 and Annet L. Louwerse 1 1 Biomedical Primate Research Centre, Animal Science Department, 2288 GJ Rijswijk, The Netherlands; [email protected] (A.R.); [email protected] (A.H.v.V.); [email protected] (E.H.M.S.); [email protected] (A.L.L.) 2 Animal Behaviour & Cognition (Formerly Animal Ecology), Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands 3 Department Population Health Sciences, Division Animals in Science and Society, Faculty of Veterinary Medicine, Utrecht University, 3584 CM Utrecht, The Netherlands * Correspondence: [email protected]; Tel.: +31-152-842-620 Simple Summary: Housing of primates in groups increases animal welfare; however, this requires management to prevent inbreeding. To this end, males are introduced into captive macaque breeding groups, mimicking the natural migration patterns of these primates. However, such male introduc- tions can be risky and unsuccessful. The procedure developed by the Biomedical Primate Research Centre (BPRC), Rijswijk, the Netherlands, to introduce male rhesus macaques (Macaca mulatta) into naturalistic social groups without a breeding male achieves relatively high success rates. Males are stepwise familiarized with and introduced to their new group, while all interactions between the new male and the resident females are closely monitored. Monitoring the behaviour of the resident Citation: Rox, A.; van Vliet, A.H.; females and their new male during all stages of the introduction provides crucial information as to Langermans, J.A.M.; Sterck, E.H.M.; whether or not it is safe to proceed. -
The Japan Monkey Centre Primates Brain Imaging Repository for Comparative Neuroscience: an Archive of Digital Records Including Records for Endangered Species
Primates (2018) 59:553–570 https://doi.org/10.1007/s10329-018-0694-3 ORIGINAL ARTICLE The Japan Monkey Centre Primates Brain Imaging Repository for comparative neuroscience: an archive of digital records including records for endangered species Tomoko Sakai1,2,3,4 · Junichi Hata2,3,5 · Hiroki Ohta3 · Yuta Shintaku6,7 · Naoto Kimura7 · Yuki Ogawa3 · Kazumi Sogabe8 · Susumu Mori1,9 · Hirotaka James Okano3 · Yuzuru Hamada10 · Shinsuke Shibata2 · Hideyuki Okano2,5 · Kenichi Oishi1 Received: 26 February 2018 / Accepted: 9 October 2018 / Published online: 24 October 2018 © The Author(s) 2018 Abstract Advances in magnetic resonance imaging (MRI) and computational analysis technology have enabled comparisons among various primate brains in a three-dimensional electronic format. Results from comparative studies provide information about common features across primates and species-specifc features of neuroanatomy. Investigation of various species of non- human primates is important for understanding such features, but the majority of comparative MRI studies have been based on experimental primates, such as common marmoset, macaques, and chimpanzee. A major obstacle has been the lack of a database that includes non-experimental primates’ brain MRIs. To facilitate scientifc discoveries in the feld of comparative neuroanatomy and brain evolution, we launched a collaborative project to develop an open-resource repository of non-human primate brain images obtained using ex vivo MRI. As an initial open resource, here we release a collection of structural MRI and difusion tensor images obtained from 12 species: pygmy marmoset, owl monkey, white-fronted capuchin, crab-eating macaque, Japanese macaque, bonnet macaque, toque macaque, Sykes’ monkey, red-tailed monkey, Schmidt’s guenon, de Brazza’s guenon, and lar gibbon. -
Ranging Bonnet Macaques, Macaca Radiata
Flexibility in Food Extraction Techniques in Urban Free- Ranging Bonnet Macaques, Macaca radiata Madhur Mangalam1, Mewa Singh1,2* 1 Biopsychology Laboratory, University of Mysore, Mysore, India, 2 Evolutionary & Organismal Biology Unit, Jawaharlal Nehru Centre for Advanced Scientific Research, Bangalore, India Abstract Non-human primate populations, other than responding appropriately to naturally occurring challenges, also need to cope with anthropogenic factors such as environmental pollution, resource depletion, and habitat destruction. Populations and individuals are likely to show considerable variations in food extraction abilities, with some populations and individuals more efficient than others at exploiting a set of resources. In this study, we examined among urban free-ranging bonnet macaques, Macaca radiata (a) local differences in food extraction abilities, (b) between-individual variation and within-individual consistency in problem-solving success and the underlying problem-solving characteristics, and (c) behavioral patterns associated with higher efficiency in food extraction. When presented with novel food extraction tasks, the urban macaques having more frequent exposure to novel physical objects in their surroundings, extracted food material from PET bottles and also solved another food extraction task (i.e., extracting an orange from a wire mesh box), more often than those living under more natural conditions. Adults solved the tasks more frequently than juveniles, and females more frequently than males. Both solution-technique and problem-solving characteristics varied across individuals but remained consistent within each individual across the successive presentations of PET bottles. The macaques that solved the tasks showed lesser within-individual variation in their food extraction behavior as compared to those that failed to solve the tasks. -
Macaques ( Macaca Leonina ): Impact on Their Seed Dispersal Effectiveness and Ecological Contribution in a Tropical Rainforest at Khao Yai National Park, Thailand
Faculté des Sciences Département de Biologie, Ecologie et Environnement Unité de Biologie du Comportement, Ethologie et Psychologie Animale Feeding and ranging behavior of northern pigtailed macaques ( Macaca leonina ): impact on their seed dispersal effectiveness and ecological contribution in a tropical rainforest at Khao Yai National Park, Thailand ~ ~ ~ Régime alimentaire et déplacements des macaques à queue de cochon ( Macaca leonina ) : impact sur leur efficacité dans la dispersion des graines et sur leur contribution écologique dans une forêt tropicale du parc national de Khao Yai, Thaïlande Année académique 2011-2012 Dissertation présentée par Aurélie Albert en vue de l’obtention du grade de Docteur en Sciences Faculté des Sciences Département de Biologie, Ecologie et Environnement Unité de Biologie du Comportement, Ethologie et Psychologie Animale Feeding and ranging behavior of northern pigtailed macaques ( Macaca leonina ): impact on their seed dispersal effectiveness and ecological contribution in a tropical rainforest at Khao Yai National Park, Thailand ~ ~ ~ Régime alimentaire et déplacements des macaques à queue de cochon ( Macaca leonina ) : impact sur leur efficacité dans la dispersion des graines et sur leur contribution écologique dans une forêt tropicale du parc national de Khao Yai, Thaïlande Année académique 2011-2012 Dissertation présentée par Aurélie Albert en vue de l’obtention du grade de Docteur en Sciences Promotrice : Marie-Claude Huynen (ULg, Belgique) Comité de thèse : Tommaso Savini (KMUTT, Thaïlande) Alain Hambuckers (ULg, Belgique) Pascal Poncin (ULg, Belgique) Président du jury : Jean-Marie Bouquegneau (ULg, Belgique) Membres du jury : Pierre-Michel Forget (MNHN, France) Régine Vercauteren Drubbel (ULB, Belgique) Roseline C. Beudels-Jamar (IRSN, Belgique) Copyright © 2012, Aurélie Albert Toute reproduction du présent document, par quelque procédé que ce soit, ne peut être réalisée qu’avec l’autorisation de l’auteur et du/des promoteur(s). -
Rhesus Macaques (Macaca Mulatta) Recognize Group Membership Via Olfactory Cues Alone
Behav Ecol Sociobiol (2015) 69:2019–2034 DOI 10.1007/s00265-015-2013-y ORIGINAL ARTICLE Rhesus macaques (Macaca mulatta) recognize group membership via olfactory cues alone Stefanie Henkel 1,2 & Angelina Ruiz Lambides1,3,4 & Anne Berger5 & Ruth Thomsen1,6,7 & Anja Widdig1,3 Received: 9 April 2015 /Revised: 18 September 2015 /Accepted: 21 September 2015 /Published online: 31 October 2015 # Springer-Verlag Berlin Heidelberg 2015 Abstract The ability to distinguish group members from con- paradigm to investigate whether rhesus macaques (Macaca specifics living in other groups is crucial for gregarious spe- mulatta) can discriminate between body odors of female cies. Olfaction is known to play a major role in group recog- group members and females from different social groups. nition and territorial defense in a wide range of mammalian We conducted the study on the research island Cayo Santiago, taxa. Although primates have been typically regarded as Puerto Rico, in the non-mating season and controlled for kin- microsmatic (having a poor sense of smell), increasing evi- ship and familiarity using extensive pedigree and demograph- dence suggests that olfaction may play a greater role in pri- ic data. Our results indicate that both males and females in- mates’ social life than previously assumed. In this study, we spect out-group odors significantly longer than in-group carried out behavioral bioassays using a signaler-receiver odors. Males licked odors more often than females, and older animals licked more often than younger ones. Furthermore, individuals tended to place their nose longer towards odors Communicated by E. Huchard when the odor donor’s group rank was higher than the rank of Electronic supplementary material The online version of this article their own group. -
Population Dynamics of the Toque Monkey, Macaca Sinica
/?7_f-P'^KS Population Dynamics of the Toque Monkey, Macaca sinica 1975. In: "Socioecology and Psychology of Primates". ii. II. 'l\ittle, ed., I out on xtiblishers: 'Dhe Hague, pp. 125-151 WOLFGANG P. J. DITTUS INTRODUCTION Fundamental to any understanding of the adaptation of animals to their natural environment is the knowledge of their numbers and life and death characteristics. The data on population dynamics to be presented here is based on a three and one-half year field study of the toque macaque, Macaca sinica (Linnaeus 1771) of Sri Lanka (Ceylon). Publications deal- ing with aspects of ecology and behavior are in preparation. The toque macaque, a member of the family Cercopithecidae, shares the subgenus Zati (Reichenbach 1862) with the bonnet macaque, M. radiata (Geoffroy 1812), of southern India and possibly M. assamensis (McClelland 1839) of northeastern India and Burma (Hill and Bernstein 1969). In its range M. sinica is confined to the forested regions of Ceylon, and three subspecies have been recognized; M. s. sinica (Linnaeus 1771), M. s. aurijrons(Pocock 1931), andM. s. op'tsthomelas(Hill 1942), Research was supported, in part, by National Science Foundation grant GB-3545, awarded to Dr. John F. Eisenberg; National Institute of Mental Health grant RolMH15673-01; -02; research grant 686 from the National Geographic Society; and Smithsonian Institution Foreign Currency Program grant SFC-7004, awarded to Dr. I. F. Eisenberg and Dr. Suzanne Ripley. It is a pleasure to express my gratitude to Dr. John F. Eisenberg whose support, advice and kind encouragement made this research a reality. I thank especially Messrs. -
Are You Suprised ?
Chapter 2 Physical features 2.1 Geographical Disposition The Pennar (Somasila) – Palar - Cauvery (Grand Anicut) link canal off takes from the existing Somasila reservoir located across the Pennar River near Somasila village in Nellore district of Andhra Pradesh state. The link canal is proposed to pass through the Kaluvaya, Rapur, Dakkili, Venkatagiri mandals of Nellore district; Srikalahasti, Thottambedu, Pitchattur and Nagari mandals of Chittoor district of Andhra Pradesh state, Tiruttani taluk of Tiruvallur district; Arakonam taluk of Vellore district; Cheyyar and Vandavasi taluks of Tiruvannamalai district; Kancheepuram, Uthiramerur taluks of Kancheepuram district; Tindivanam, Gingee, Villupuram, Tirukoilur taluks of Villupuram district; Ulundurpettai, Vridhachalam, Tittagudi taluks of Cuddalore district; Udaiyarpalayam, Ariyalur taluk of Perambalur district; and Lalgudi taluk of Tiruchchirappalli district of Tamil Nadu state.The link canal alignment passes through Pennar basin, Streams between Pennar and Palar basins, Palar basin and streams between Palar and Cauvery basins. The link canal takes off from the right flank of Somasila dam with a full supply level of 95.420 m. and runs parallel on right side of the Kandaleru flood flow canal, upto RD 10 km. The canal generally runs in south direction till it out-falls into Grand Anicut across Cauvery River at RD 529.190 km. The major rivers that would be crossed by the canal are Swarnamukhi, Arani Ar, Nagari, Palar, Cheyyar, Ponnaiyar, and Vellar. The districts that would be benefited by the link canal through enroute irrigation are Nellore, Chittoor of Andhra Pradesh state and Tiruvallur, Kancheepuram, Vellore, Tiruvannamalai, Villupuram, Cuddalore districts of Tamil Nadu state and Pondicherry (U.T). -
Subspecies of Sri Lankan Mammals As Units of Biodiversity Conservation, with Special Reference to the Primates
Ceylon Journal of Science (Bio. Sci.) 42(2): 1-27, 2013 DOI: http://dx.doi.org/10.4038/cjsbs.v42i2.6606 LEAD ARTICLE Subspecies of Sri Lankan Mammals as Units of Biodiversity Conservation, with Special Reference to the Primates Wolfgang P. J. Dittus1, 2 1National Institute of Fundamental Studies, Kandy 2000, Sri Lanka. 2Smithsonian Conservation Biology Institute, Washington, DC 20013, USA. ABSTRACT Subspecies embody the evolution of different phenotypes as adaptations to local environmental differences in keeping with the concept of the Evolutionary Significant Unit (ESU). Sri Lankan mammals, being mostly of Indian-Indochinese origins, were honed, in part, by the events following the separation of Sri Lanka from Gondwana in the late Miocene. The emerging new Sri Lankan environment provided a varied topographic, climatic and biotic stage and impetus for new mammalian adaptations. This history is manifest nowhere as clearly as in the diversity of non-endemic and endemic genera, species and subspecies of Sri Lankan mammals that offer a cross-sectional time-slice (window) of evolution in progress: 3 of 53 genera (6%), and 22 of 91 species (24%) are endemic, but incorporating subspecies, the majority 69 of 108 (64%) Sri Lankan land-living indigenous mammal taxa are diversified as endemics. (Numerical details may change with taxonomic updates, but the pattern is clear). These unique forms distinguish Sri Lankan mammals from their continental relatives, and contribute to the otherwise strong biogeographic differences within the biodiversity hotspot shared with the Western Ghats. Regardless of the eventual fates of individual subspecies or ESU’s they are repositories of phenotypic and genetic diversity and crucibles for the evolution of new endemic species and genera. -
Macaca Fascicularis) in Thailand
The Natural History Journal of Chulalongkorn University 8(2): 185-204, October 2008 ©2008 by Chulalongkorn University Current Situation and Status of Long-tailed Macaques (Macaca fascicularis) in Thailand SUCHINDA MALAIVIJITNOND1* AND YUZURU HAMADA2 1Primate Research Unit, Department of Biology, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand. 2Section of Morphology, Primate Research Institute, Kyoto University, Inuyama, Japan. ABSTRACT.– Long-tailed macaques (Macaca fascicularis) are the most frequently encountered primate in Thailand. They are currently considered at low risk for extinction, however, they are threatened by habitat fragmentation or loss, inbreeding or outbreeding depression and hybridization. At present, no management measures have been taken and updated information on their situation and status are urgently needed. We sent questionnaires throughout Thailand to a total of 7,410 sub-districts, and received 1,417 (19.12%) replies. We traveled to the sub-districts from which the positive replies to questionnaires on macaques were obtained, from December 2002 to December 2007 and found long-tailed macaques in 74 locations which ranged from the lower northern and northeastern (ca. 16° 30´ N) to the southernmost part (ca. 6° 30´ N) of Thailand. The distribution of long-tailed macaques at present is similar to that reported 30 years ago, but their habitats have changed from natural forests to temples or recreation parks. On average, 200 monkeys per location were counted and some populations had more than 1,000 individuals. In some locations they were regarded as pests. Local authorities took short-term management measures such as translocation and contraception. Although many troops of Thai long- tailed macaques have inflated population densities, some local troops exhibited morphological, genetic and behavioural uniqueness that may be important to conserve.