An Extremely Rare Case of Concurrent BRAF V600E Mutation Driven Hairy Cell Leukemia and Melanoma: Case Report and Review of Literature
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Prevalence of MADH4 and BMPR1A Mutations in Juvenile Polyposis and Absence of BMPR2, BMPR1B, and ACVR1 Mutations
484 ORIGINAL ARTICLE J Med Genet: first published as 10.1136/jmg.2004.018598 on 2 July 2004. Downloaded from The prevalence of MADH4 and BMPR1A mutations in juvenile polyposis and absence of BMPR2, BMPR1B, and ACVR1 mutations J R Howe, M G Sayed, A F Ahmed, J Ringold, J Larsen-Haidle, A Merg, F A Mitros, C A Vaccaro, G M Petersen, F M Giardiello, S T Tinley, L A Aaltonen, H T Lynch ............................................................................................................................... J Med Genet 2004;41:484–491. doi: 10.1136/jmg.2004.018598 Background: Juvenile polyposis (JP) is an autosomal dominant syndrome predisposing to colorectal and gastric cancer. We have identified mutations in two genes causing JP, MADH4 and bone morphogenetic protein receptor 1A (BMPR1A): both are involved in bone morphogenetic protein (BMP) mediated signalling and are members of the TGF-b superfamily. This study determined the prevalence of mutations See end of article for in MADH4 and BMPR1A, as well as three other BMP/activin pathway candidate genes in a large number authors’ affiliations ....................... of JP patients. Methods: DNA was extracted from the blood of JP patients and used for PCR amplification of each exon of Correspondence to: these five genes, using primers flanking each intron–exon boundary. Mutations were determined by Dr J R Howe, Department of Surgery, 4644 JCP, comparison to wild type sequences using sequence analysis software. A total of 77 JP cases were University of Iowa College sequenced for mutations in the MADH4, BMPR1A, BMPR1B, BMPR2, and/or ACVR1 (activin A receptor) of Medicine, 200 Hawkins genes. The latter three genes were analysed when MADH4 and BMPR1A sequencing found no mutations. -
The Mechanism of Activation of Monomeric B-Raf V600E
bioRxiv preprint doi: https://doi.org/10.1101/2021.04.06.438646; this version posted June 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. The Mechanism of Activation of Monomeric B-Raf V600E Ryan C. Maloneya, Mingzhen Zhanga, Hyunbum Janga and Ruth Nussinova,b,* a Computational Structural Biology Section, Frederick National Laboratory for Cancer Research in the Laboratory of Cancer Immunometabolism, National Cancer Institute, Frederick, MD 21702, U.S.A b Department of Human Molecular Genetics and Biochemistry, Sackler School of Medicine, Tel Aviv University, Tel Aviv 69978, Israel * Author for correspondence: Tel: 1-301-846-5579 E-mail: [email protected] Declarations of interest: none 1 bioRxiv preprint doi: https://doi.org/10.1101/2021.04.06.438646; this version posted June 8, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Abstract Oncogenic mutations in the serine/threonine kinase B-Raf, particularly the V600E mutation, are frequent in cancer, making it a major drug target. Although much is known about B-Raf’s active and inactive states, questions remain about the mechanism by which the protein changes between these two states. Here, we utilize molecular dynamics to investigate both wild-type and V600E B-Raf to gain mechanistic insights into the impact of the Val to Glu mutation. -
Casein Kinase 1 Isoforms in Degenerative Disorders
CASEIN KINASE 1 ISOFORMS IN DEGENERATIVE DISORDERS DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Theresa Joseph Kannanayakal, M.Sc., M.S. * * * * * The Ohio State University 2004 Dissertation Committee: Approved by Professor Jeff A. Kuret, Adviser Professor John D. Oberdick Professor Dale D. Vandre Adviser Professor Mike X. Zhu Biophysics Graduate Program ABSTRACT Casein Kinase 1 (CK1) enzyme is one of the largest family of Serine/Threonine protein kinases. CK1 has a wide distribution spanning many eukaryotic families. In cells, its kinase activity has been found in various sub-cellular compartments enabling it to phosphorylate many proteins involved in cellular maintenance and disease pathogenesis. Tau is one such substrate whose hyperphosphorylation results in degeneration of neurons in Alzheimer’s disease (AD). AD is a slow neuroprogessive disorder histopathologically characterized by Granulovacuolar degeneration bodies (GVBs) and intraneuronal accumulation of tau in Neurofibrillary Tangles (NFTs). The level of CK1 isoforms, CK1α, CK1δ and CK1ε has been shown to be elevated in AD. Previous studies of the correlation of CK1δ with lesions had demonstrated its importance in tau hyperphosphorylation. Hence we investigated distribution of CK1α and CK1ε with the lesions to understand if they would play role in tau hyperphosphorylation similar to CK1δ. The kinase results were also compared with lesion correlation studies of peptidyl cis/trans prolyl isomerase (Pin1) and caspase-3. Our results showed that among the enzymes investigated, CK1 isoforms have the greatest extent of colocalization with the lesions. We have also investigated the distribution of CK1α with different stages of NFTs that follow AD progression. -
RAF Protein-Serine/Threonine Kinases: Structure and Regulation
Biochemical and Biophysical Research Communications 399 (2010) 313–317 Contents lists available at ScienceDirect Biochemical and Biophysical Research Communications journal homepage: www.elsevier.com/locate/ybbrc Mini Review RAF protein-serine/threonine kinases: Structure and regulation Robert Roskoski Jr. * Blue Ridge Institute for Medical Research, 3754 Brevard Road, Suite 116, Box 19, Horse Shoe, NC 28742, USA article info abstract Article history: A-RAF, B-RAF, and C-RAF are a family of three protein-serine/threonine kinases that participate in the Received 12 July 2010 RAS-RAF-MEK-ERK signal transduction cascade. This cascade participates in the regulation of a large vari- Available online 30 July 2010 ety of processes including apoptosis, cell cycle progression, differentiation, proliferation, and transforma- tion to the cancerous state. RAS mutations occur in 15–30% of all human cancers, and B-RAF mutations Keywords: occur in 30–60% of melanomas, 30–50% of thyroid cancers, and 5–20% of colorectal cancers. Activation 14-3-3 of the RAF kinases requires their interaction with RAS-GTP along with dephosphorylation and also phos- ERK phorylation by SRC family protein-tyrosine kinases and other protein-serine/threonine kinases. The for- GDC-0879 mation of unique side-to-side RAF dimers is required for full kinase activity. RAF kinase inhibitors are MEK Melanoma effective in blocking MEK1/2 and ERK1/2 activation in cells containing the oncogenic B-RAF Val600Glu PLX4032 activating mutation. RAF kinase inhibitors lead to the paradoxical increase in RAF kinase activity in cells PLX4720 containing wild-type B-RAF and wild-type or activated mutant RAS. -
Analysis of Protein Kinase Domain and Tyrosine Kinase Or Serine/Threonine Kinase Signatures Involved in Lung Cancer
Analysis of Protein Kinase Domain and Tyrosine Kinase Or serine/Threonine Kinase Signatures Involved In Lung Cancer Lung cancer results when normal check and balance system of cell division is disrupted and ultimately the cells divide and proliferate in an uncontrollable manner forming a mass of cells in our body, known as tumor. Frequent mutations in Protein Kinase Domain alter the process of phosphorylation which results in abnormality in regulations of cell apoptosis and differentiation. Tyrosine Protein kinases and Serine/Threonine Protein Kinases are the two s t broad classes of protein kinases in accordance to their substrate specificity. The study of n i r Tyrosine protein kinase and serine Kinase coding regions have the importance of sequence P and structure determinants of cancer-causing mutations from mutation-dependent activation e r P process. In the present study, we analyzed huge amounts of data extracted from various biological databases and NCBI. Out of the 534 proteins that may play a role in lung cancer, 71 proteins were selected that are likely to be actively involved in lung cancer. These proteins were evaluated by employing Multiple Sequence Alignment and a Phylogenetic tree was constructed using Neighbor-Joining Algorithm. From the constructed phylogenetic tree, protein kinase domain and motif study was performed. The results of this study revealed that the presence of Protein Kinase Domain and Tyrosine or Serine/Threonine Kinase signatures in some of the proteins are mutated, which play a dominant role in the pathogenesis of Lung Cancer and these may be addressed with the help of inhibitors to develop an efficient anticancer drugs. -
Microrna Deregulation in Papillary Thyroid Cancer and Its
in vivo 35 : 319-323 (2021) doi:10.21873/invivo.12262 MicroRNA Deregulation in Papillary Thyroid Cancer and its Relationship With BRAF V600E Mutation PETR CELAKOVSKY 1, HELENA KOVARIKOVA 2, VIKTOR CHROBOK 1, JAN MEJZLIK 1, JAN LACO 3, HANA VOSMIKOVA 3, MARCELA CHMELAROVA 2 and ALES RYSKA 3 1Department of Otorhinolaryngology and Head and Neck Surgery, University Hospital Hradec Králové, Králové, Czech Republic; 2Institute of Clinical Biochemistry and Diagnostics, University Hospital Hradec Králové, Králové, Czech Republic; 3Fingerland Department of Pathology, University Hospital Hradec Králové, Králové, Czech Republic Abstract. Background: MicroRNAs (miRNAs) are non- miRNAs in PTC compared to normal thyroid gland tissue coding regulatory molecules 18-25 nucleotides in length and nodular goitre was found. Moreover, miR-221 may that act as post-transcriptional regulators of gene serve as a prognostic marker as its over-expression was expression. MiRNAs affect various biological processes significantly associated with recurrent tumors. including carcinogenesis. Deregulation of miRNAa expression has been described in a variety of tumors Thyroid cancer is the most common malignant tumor of the including papillary thyroid carcinoma (PTC). The aim of the endocrine system (1-2). The incidence of thyroid cancer has present study was to investigate the role of selected miRNAs increased dramatically over last three decades (3). Papillary in PTC and find associations between miRNA expression thyroid carcinoma (PTC) represents the majority of and the BRAF (V600E) mutation. Materials and Methods: malignant thyroid tumors, accounting for approximately 80% The study group comprised a total of 62 patients with of all thyroid cancers (4-5). Its overall prognosis is surgically treated PTC. -
Two Novel Disease-Causing Variants in BMPR1B Are Associated with Brachydactyly Type A1
European Journal of Human Genetics (2015) 23, 1640–1645 & 2015 Macmillan Publishers Limited All rights reserved 1018-4813/15 www.nature.com/ejhg ARTICLE Two novel disease-causing variants in BMPR1B are associated with brachydactyly type A1 Lemuel Racacho1,2, Ashley M Byrnes1,3, Heather MacDonald3, Helen J Dranse4, Sarah M Nikkel5,6, Judith Allanson6, Elisabeth Rosser7, T Michael Underhill4 and Dennis E Bulman*,1,2,5 Brachydactyly type A1 is an autosomal dominant disorder primarily characterized by hypoplasia/aplasia of the middle phalanges of digits 2–5. Human and mouse genetic perturbations in the BMP-SMAD signaling pathway have been associated with many brachymesophalangies, including BDA1, as causative mutations in IHH and GDF5 have been previously identified. GDF5 interacts directly as the preferred ligand for the BMP type-1 receptor BMPR1B and is important for both chondrogenesis and digit formation. We report pathogenic variants in BMPR1B that are associated with complex BDA1. A c.975A4C (p. (Lys325Asn)) was identified in the first patient displaying absent middle phalanges and shortened distal phalanges of the toes in addition to the significant shortening of middle phalanges in digits 2, 3 and 5 of the hands. The second patient displayed a combination of brachydactyly and arachnodactyly. The sequencing of BMPR1B in this individual revealed a novel c.447-1G4A at a canonical acceptor splice site of exon 8, which is predicted to create a novel acceptor site, thus leading to a translational reading frameshift. Both mutations are most likely to act in a dominant-negative manner, similar to the effects observed in BMPR1B mutations that cause BDA2. -
1596.Full-Text.Pdf
Published OnlineFirst May 12, 2017; DOI: 10.1158/1535-7163.MCT-16-0798 Cancer Biology and Signal Transduction Molecular Cancer Therapeutics Identification of the Serine Biosynthesis Pathway as a Critical Component of BRAF Inhibitor Resistance of Melanoma, Pancreatic, and Non–Small Cell Lung Cancer Cells Kayleigh C. Ross1, Andrew J. Andrews1,2, Christopher D. Marion1, Timothy J. Yen2, and Vikram Bhattacharjee1 Abstract Metastatic melanoma cells commonly acquire resistance to to BRAF WT tumor cell lines that are intrinsically resistant to BRAF V600E inhibitors (BRAFi). In this study, we identified vemurafenib and dabrafenib. Pretreatment of pancreatic serine biosynthesis as a critical mechanism of resistance. Prote- cancer and non–small cell lung cancer cell lines with sublethal omic assays revealed differential protein expression of serine dosesof50and5nmol/Lofgemcitabine,respectively, biosynthetic enzymes PHGDH, PSPH, and PSAT1 following enhanced killing by both vemurafenib and dabrafenib. The vemurafenib (BRAFi) treatment in sensitive versus acquired novel aspects of this study are the direct identification of serine resistant melanoma cells. Ablation of PHGDH via siRNA sen- biosynthesis as a critical mechanism of BRAF V600E inhibitor sitizedacquiredresistantcells to vemurafenib. Inhibiting the resistance and the first successful example of using gemcitabine folate cycle, directly downstream of serine synthesis, with þ BRAFis in combination to kill previously drug-resistant methotrexate also displayed similar sensitization. Using cancer cells, creating the translational potential of pretreatment the DNA-damaging drug gemcitabine, we show that gemcita- with gemcitabine prior to BRAFi treatment of tumor cells to bine pretreatment sensitized resistant melanoma cells to BRA- reverse resistance within the mutational profile and the WT. Fis vemurafenib and dabrafenib. -
COTELLIC™ (Cobimetinib) Oral Tablet
PHARMACY COVERAGE GUIDELINES ORIGINAL EFFECTIVE DATE: 1/21/2016 SECTION: DRUGS LAST REVIEW DATE: 2/18/2021 LAST CRITERIA REVISION DATE: 2/18/2021 ARCHIVE DATE: COTELLIC™ (cobimetinib) oral tablet Coverage for services, procedures, medical devices and drugs are dependent upon benefit eligibility as outlined in the member's specific benefit plan. This Pharmacy Coverage Guideline must be read in its entirety to determine coverage eligibility, if any. This Pharmacy Coverage Guideline provides information related to coverage determinations only and does not imply that a service or treatment is clinically appropriate or inappropriate. The provider and the member are responsible for all decisions regarding the appropriateness of care. Providers should provide BCBSAZ complete medical rationale when requesting any exceptions to these guidelines. The section identified as “Description” defines or describes a service, procedure, medical device or drug and is in no way intended as a statement of medical necessity and/or coverage. The section identified as “Criteria” defines criteria to determine whether a service, procedure, medical device or drug is considered medically necessary or experimental or investigational. State or federal mandates, e.g., FEP program, may dictate that any drug, device or biological product approved by the U.S. Food and Drug Administration (FDA) may not be considered experimental or investigational and thus the drug, device or biological product may be assessed only on the basis of medical necessity. Pharmacy Coverage Guidelines are subject to change as new information becomes available. For purposes of this Pharmacy Coverage Guideline, the terms "experimental" and "investigational" are considered to be interchangeable. BLUE CROSS®, BLUE SHIELD® and the Cross and Shield Symbols are registered service marks of the Blue Cross and Blue Shield Association, an association of independent Blue Cross and Blue Shield Plans. -
Kinase-Targeted Cancer Therapies: Progress, Challenges and Future Directions Khushwant S
Bhullar et al. Molecular Cancer (2018) 17:48 https://doi.org/10.1186/s12943-018-0804-2 REVIEW Open Access Kinase-targeted cancer therapies: progress, challenges and future directions Khushwant S. Bhullar1, Naiara Orrego Lagarón2, Eileen M. McGowan3, Indu Parmar4, Amitabh Jha5, Basil P. Hubbard1 and H. P. Vasantha Rupasinghe6,7* Abstract The human genome encodes 538 protein kinases that transfer a γ-phosphate group from ATP to serine, threonine, or tyrosine residues. Many of these kinases are associated with human cancer initiation and progression. The recent development of small-molecule kinase inhibitors for the treatment of diverse types of cancer has proven successful in clinical therapy. Significantly, protein kinases are the second most targeted group of drug targets, after the G-protein- coupled receptors. Since the development of the first protein kinase inhibitor, in the early 1980s, 37 kinase inhibitors have received FDA approval for treatment of malignancies such as breast and lung cancer. Furthermore, about 150 kinase-targeted drugs are in clinical phase trials, and many kinase-specific inhibitors are in the preclinical stage of drug development. Nevertheless, many factors confound the clinical efficacy of these molecules. Specific tumor genetics, tumor microenvironment, drug resistance, and pharmacogenomics determine how useful a compound will be in the treatment of a given cancer. This review provides an overview of kinase-targeted drug discovery and development in relation to oncology and highlights the challenges and future potential for kinase-targeted cancer therapies. Keywords: Kinases, Kinase inhibition, Small-molecule drugs, Cancer, Oncology Background Recent advances in our understanding of the fundamen- Kinases are enzymes that transfer a phosphate group to a tal molecular mechanisms underlying cancer cell signaling protein while phosphatases remove a phosphate group have elucidated a crucial role for kinases in the carcino- from protein. -
Src Protein-Tyrosine Kinase Structure, Mechanism, and Small Molecule Inhibitors
Pharmacological Research 94 (2015) 9–25 Contents lists available at ScienceDirect Pharmacological Research j ournal homepage: www.elsevier.com/locate/yphrs Invited Review Src protein-tyrosine kinase structure, mechanism, and small molecule inhibitors ∗ Robert Roskoski Jr. Blue Ridge Institute for Medical Research, 3754 Brevard Road, Suite 116, Box 19, Horse Shoe, NC 28742-8814, United States a r t i c l e i n f o a b s t r a c t Article history: The physiological Src proto-oncogene is a protein-tyrosine kinase that plays key roles in cell growth, Received 26 January 2015 division, migration, and survival signaling pathways. From the N- to C-terminus, Src contains a unique Accepted 26 January 2015 domain, an SH3 domain, an SH2 domain, a protein-tyrosine kinase domain, and a regulatory tail. The Available online 3 February 2015 chief phosphorylation sites of human Src include an activating pTyr419 that results from phosphory- lation in the kinase domain by an adjacent Src molecule and an inhibitory pTyr530 in the regulatory This paper is dedicated to the memory of tail that results from phosphorylation by C-terminal Src kinase (Csk) or Chk (Csk homologous kinase). Prof. Donald F. Steiner (1930–2014) – advisor, mentor, and discoverer of The oncogenic Rous sarcoma viral protein lacks the equivalent of Tyr530 and is constitutively activated. proinsulin. Inactive Src is stabilized by SH2 and SH3 domains on the rear of the kinase domain where they form an immobilizing and inhibitory clamp. Protein kinases including Src contain hydrophobic regulatory and Chemical compounds studied in this article: catalytic spines and collateral shell residues that are required to assemble the active enzyme. -
BRAF Gene and Melanoma: Back to the Future
International Journal of Molecular Sciences Review BRAF Gene and Melanoma: Back to the Future Margaret Ottaviano 1,2,3,*,† , Emilio Francesco Giunta 4,† , Marianna Tortora 3 , Marcello Curvietto 5, Laura Attademo 2, Davide Bosso 2, Cinzia Cardalesi 2, Mario Rosanova 2, Pietro De Placido 1, Erica Pietroluongo 1 , Vittorio Riccio 1, Brigitta Mucci 1, Sara Parola 1, Maria Grazia Vitale 5, Giovannella Palmieri 3 , Bruno Daniele 2 , Ester Simeone 5 and on behalf of SCITO YOUTH ‡ 1 Department of Clinical Medicine and Surgery, Università Degli Studi di Napoli “Federico II”, 80131 Naples, Italy; [email protected] (P.D.P.); [email protected] (E.P.); [email protected] (V.R.); [email protected] (B.M.); [email protected] (S.P.) 2 Oncology Unit, Ospedale del Mare, 80147 Naples, Italy; [email protected] (L.A.); [email protected] (D.B.); [email protected] (C.C.); [email protected] (M.R.); [email protected] (B.D.) 3 CRCTR Coordinating Rare Tumors Reference Center of Campania Region, 80131 Naples, Italy; [email protected] (M.T.); [email protected] (G.P.) 4 Department of Precision Medicine, Università Degli Studi della Campania Luigi Vanvitelli, 80131 Naples, Italy; [email protected] 5 Unit of Melanoma, Cancer Immunotherapy and Development Therapeutics, Istituto Nazionale Tumori IRCCS Fondazione Pascale, 80131 Naples, Italy; [email protected] (M.C.); [email protected] (M.G.V.); [email protected] (E.S.) * Correspondence: [email protected] † These authors contributed equally to this work. ‡ Membership of the SCITO YOUTH is provided in the Acknowledgments. Citation: Ottaviano, M.; Giunta, E.F.; Tortora, M.; Curvietto, M.; Attademo, Abstract: As widely acknowledged, 40–50% of all melanoma patients harbour an activating BRAF L.; Bosso, D.; Cardalesi, C.; Rosanova, mutation (mostly BRAF V600E).