Correction (934.7Kb)

Total Page：16

File Type：pdf, Size：1020Kb

Correction Correction: Population Genetics of the Saõ Tome´ Caecilian (Gymnophiona: Dermophiidae: Schistometopum thomense) Reveals Strong Geographic Structuring The PLOS ONE Staff The parameter name in the Materials and Methods section and Results section are incorrectly formatted. In all cases, the correct parameter name is Fu’s Fs. The genetic variability measure in the Results section is incorrectly formatted. The correct genetic variability measure is FST. The Figure 1 legend is incorrect. The word ‘‘Red’’ should be ‘‘Black’’ in the last sentence. The authors have provided a corrected version here. Citation: The PLOS ONE Staff (2014) Correction: Population Genetics of the Saõ Tome´ Caecilian (Gymnophiona: Dermophiidae: Schistometopum thomense) Reveals Strong Geographic Structuring. PLoS ONE 9(12): e116005. doi:10.1371/ journal.pone.0116005 Published December 15, 2014 Copyright: ß 2014 The PLOS ONE Staff. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. PLOS ONE | www.plosone.org 1 December 2014 | Volume 9 | Issue 12 | e116005 Figure 1. Schistometopum thomense collection localities, Saõ Tome´, Republic of Saõ Tome´ and Prıńcipe. Numbers in parentheses indicate number of specimens available for genetic analyses. Legend indicates specimens used in Splits Tree, Bayesian, SAMOVA, and/or IMa2 analyses, or discussed by Nussbaum and Pfrender [36] in morphological comparisons. Dashed, red ovals indicate populations lumped for SAMOVA analyses. Photographs show examples of clear and flecked morphs as Schistometopum thomense and Schistometopum ‘‘ephele’’, respectively. Red star in lower left panel indicates relative position of Saõ Tome´ to continental Africa. doi:10.1371/journal.pone.0104628.g001 Reference 1. Stoelting RE, Measey GJ, Drewes RC (2014) Population Genetics of the Saõ Tome´ Caecilian (Gymnophiona: Dermophiidae: Schistometopum thomense) Reveals Strong Geographic Structuring. PLoS ONE 9(8): e104628. doi:10.1371/journal.pone.0104628 PLOS ONE | www.plosone.org 2 December 2014 | Volume 9 | Issue 12 | e116005.

Copy Link

Recommended publications

Chec List a Checklist of the Amphibians and Reptiles of San
Check List 10(4): 870–877, 2014 © 2014 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution PECIES S OF A checklist * of the amphibians and reptiles of San Isidro de ISTS L Dota, Reserva Forestal Los Santos, Costa Rica Erick Arias and Federico Bolaños [email protected] Universidad de Costa Rica, Escuela de Biología, Museo de Zoología. San Pedro, 11501-2060, San José, Costa Rica. * Corresponding author. E-mail: Abstract: We present an inventory of amphibians and reptiles of San Isidro de Dota, northwest of the Cordillera de Talamanca in the Central Pacific of Costa Rica.Leptodactylus The study was insularum conduced from January to August 2012 in premontane wet Coloptychonforest from 689 rhombifer m to 800 m elevation. We found a total of 56 species, including 30 species of amphibians and 26 of reptiles. It results striking the presence of the frog , uncommon above 400 m elevation, and the lizard , a very uncommon species. DOI: 10.15560/10.4.870 Introduction datum, from 689 m to 800 N, 83°58′32.41″ W, WGS84et al. Lower Central America represents one of the regions m elevation). The region is dominated by premontane with the highest numberet al of amphibianset describedal. in the wet forest (Bolaños 1999) with several sites used Neotropics in relation to the area it represent (Savage for agriculture and pastures. The region presents the 2002; Boza-Oviedo . 2012; Hertz 2012). Much climate of the pacific slope of the Cordillera de Talamanca, of this richness of species iset associated al.
[Show full text]
BOA2.1 Caecilian Biology and Natural History.Key
The Biology of Amphibians @ Agnes Scott College Mark Mandica Executive Director The Amphibian Foundation [email protected] 678 379 TOAD (8623) 2.1: Introduction to Caecilians Microcaecilia dermatophaga Synapomorphies of Lissamphibia There are more than 20 synapomorphies (shared characters) uniting the group Lissamphibia Synapomorphies of Lissamphibia Integumen is Glandular Synapomorphies of Lissamphibia Glandular Skin, with 2 main types of glands. Mucous Glands Aid in cutaneous respiration, reproduction, thermoregulation and defense. Granular Glands Secrete toxic and/or noxious compounds and aid in defense Synapomorphies of Lissamphibia Pedicellate Teeth crown (dentine, with enamel covering) gum line suture (fibrous connective tissue, where tooth can break off) basal element (dentine) Synapomorphies of Lissamphibia Sacral Vertebrae Sacral Vertebrae Connects pelvic girdle to The spine. Amphibians have no more than one sacral vertebrae (caecilians have none) Synapomorphies of Lissamphibia Amphicoelus Vertebrae Synapomorphies of Lissamphibia Opercular apparatus Unique to amphibians and Operculum part of the sound conducting mechanism Synapomorphies of Lissamphibia Fat Bodies Surrounding Gonads Fat Bodies Insulate gonads Evolution of Amphibians † † † † Actinopterygian Coelacanth, Tetrapodomorpha †Amniota *Gerobatrachus (Ray-fin Fishes) Lungfish (stem-tetrapods) (Reptiles, Mammals)Lepospondyls † (’frogomander’) Eocaecilia GymnophionaKaraurus Caudata Triadobatrachus Anura (including Apoda Urodela Prosalirus †) Salientia Batrachia Lissamphibia
[Show full text]
REVISION O F the AFRICAN Caeclllan GENUS
REVISION OFTHE AFRICAN CAEClLlAN GENUS SCHISTOMETOPUM PARKER (AMPH IBIA: CYMNOPHIONA: CAECILI IDAE) BY RONALD A. NU AND MICHAEL E. PFRENDER MISCELLANEC JS PUBLICATIONS MUSEUM OF ZOOLOGY, UNIVERSITY OF MICHIGAN, NO. 18Fb; ' Ann Arbor, September 2 7, 1 998 ISSN 076-8405 MIS(:ELIANEOUS PUBLICATIONS MUSEUM OF ZOOLOGY, LJNTVERSITY OF MICHIGAN NO. 187 The publicatioils of the M~~sclunof Zoology, The [Jniversity of Michigan, consist PI-irnarilyof two series-the Occasion:~lPapers allti the Miscellaneous Publicatio~ls.Both series were founded by Dc Bryant Walker, Mr. Rradshaw H. Swales, anti Dr. W.W. Newcornb. Occasionally the Museuni publishes contributiorls outside of these series; begirlnirlg in 1990 these are titled Special Publicatio~lsa~ld arc numbered. All submitted ~n;inl~scriptsreceive external review. The Misccllarieous Publications, which include ~l~ollographicstltdies, papers on field and ~II- seuln techniques, and other contributions 11ot within the scope of the Occasio~lalPapers, are pl~b- lishcd separately. It is not intended that they be grouped into volumes. Each 11r11nberhas a title page and, when necessary, a table of co1itelits. Tllc Occasional Papel-s, publication of which was begun in 1913, servc as a medium Sol- original studies based prirlcipally upon the collections in the Museurn. They are issurtl separately. MThen a sufficient number of pages has hcen printed to niakc a volume, a title pagc, table of contenb, and an index are supplied to libraries and individuals on the mailing list for the series. A cornplete list of publications on Birds, Fishes, Insects, Mammals, Moll~~sks,Rcpdles and Amphib- ians, and other topics is available. Address inquiries to the Directt)r, Muse~unof Zoolohy, The lir~ivcr- sity of Michigan, Ann Arbor, Michigarl 48109-1079.
[Show full text]
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca
Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca John F. Lamoreux, Meghan W. McKnight, and Rodolfo Cabrera Hernandez Occasional Paper of the IUCN Species Survival Commission No. 53 The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN or other participating organizations. Published by: IUCN, Gland, Switzerland Copyright: © 2015 International Union for Conservation of Nature and Natural Resources Reproduction of this publication for educational or other non-commercial purposes is authorized without prior written permission from the copyright holder provided the source is fully acknowledged. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. Citation: Lamoreux, J. F., McKnight, M. W., and R. Cabrera Hernandez (2015). Amphibian Alliance for Zero Extinction Sites in Chiapas and Oaxaca. Gland, Switzerland: IUCN. xxiv + 320pp. ISBN: 978-2-8317-1717-3 DOI: 10.2305/IUCN.CH.2015.SSC-OP.53.en Cover photographs: Totontepec landscape; new Plectrohyla species, Ixalotriton niger, Concepción Pápalo, Thorius minutissimus, Craugastor pozo (panels, left to right) Back cover photograph: Collecting in Chamula, Chiapas Photo credits: The cover photographs were taken by the authors under grant agreements with the two main project funders: NGS and CEPF.
[Show full text]
Amphibiaweb's Illustrated Amphibians of the Earth
AmphibiaWeb's Illustrated Amphibians of the Earth Created and Illustrated by the 2020-2021 AmphibiaWeb URAP Team: Alice Drozd, Arjun Mehta, Ash Reining, Kira Wiesinger, and Ann T. Chang This introduction to amphibians was written by University of California, Berkeley AmphibiaWeb Undergraduate Research Apprentices for people who love amphibians. Thank you to the many AmphibiaWeb apprentices over the last 21 years for their efforts. Edited by members of the AmphibiaWeb Steering Committee CC BY-NC-SA 2 Dedicated in loving memory of David B. Wake Founding Director of AmphibiaWeb (8 June 1936 - 29 April 2021) Dave Wake was a dedicated amphibian biologist who mentored and educated countless people. With the launch of AmphibiaWeb in 2000, Dave sought to bring the conservation science and basic fact-based biology of all amphibians to a single place where everyone could access the information freely. Until his last day, David remained a tirelessly dedicated scientist and ally of the amphibians of the world. 3 Table of Contents What are Amphibians? Their Characteristics ...................................................................................... 7 Orders of Amphibians.................................................................................... 7 Where are Amphibians? Where are Amphibians? ............................................................................... 9 What are Bioregions? ..................................................................................10 Conservation of Amphibians Why Save Amphibians? .............................................................................
[Show full text]
Downloaded on 24 September 2013
ISSN 2320-5407 International Journal of Advanced Research (2014), Volume 2, Issue 1, 802-809 Journal homepage: http://www.journalijar.com INTERNATIONAL JOURNAL OF ADVANCED RESEARCH RESEARCH ARTICLE Karyology of the East African caecilian Schistometopum gregorii (Amphibia: Gymnophiona) from the Tana River Delta, Kenya Venu Govindappa Centre for Applied Genetics, Department of Zoology, Bangalore University, Bangalore, Karnataka, India. Manuscript Info Abstract Manuscript History: This report presents a male somatic karyotype (2N=22; FN=40) and late meiotic stages of Schistometopum gregorii that seems to fall in line with that Received: 11 November 2013 Final Accepted: 22 December 2013 of other taxa of the family Dermophiidae. In view of a different basic Published Online: January 2014 chromosome number prevailing for this species as well for this group, it appears possible to predict that this East African species posits more closely Key words: related towards Indian endemic Indotyphlidae. Schistometopum gregorii, Giemsa stained chromosomes, meiosis, karyotype. Copy Right, IJAR, 2014,. All rights reserved. Introduction Caecilians are the limbless and elongate amphibians that form the third extant order of Amphibia and are recognised by approximately 190 species (Frost, 2013; Nishikawa et al., 2013). They are sparsely distributed in the wet or moist tropics (except Madagascar) east of the Wallace line (Himstedt, 1996; Kamei et al., 2012). African caecilians (excluding the Seychelles) are represented by about 21 species (Gower et al., 2005), most of which are known from the Eastern Arc Mountains and Coastal Forests biodiversity hotspots (Myers et al., 2000). The coastal forests of eastern Africa contain remarkable levels of biodiversity which have been formally recognised by their reclassification into the Coastal Forests of Eastern Africa, while the Eastern Arc Mountains have been included in the larger Eastern Afromotane hotspot (Myers, 2003; Wilkinson and Nussbaum, 2006; Wilkinson et al., 2003).
[Show full text]
Amphibia: Gymnophiona: Dermophiidae)
RESEARCH ARTICLE The Herpetological Bulletin 129, 2014: 15-18 Towards evidence-based husbandry for caecilian amphibians: Substrate preference in Geotrypetes seraphini (Amphibia: Gymnophiona: Dermophiidae) BenjAMIn TAPley1*, Zoe BryAnT1, SEBASTIAN GRANT1, GRANT KOTHER1, yedrA FEltrER1, NIC MASTERS1, TAINA STRIKE1, IRI GILL1, MARK WILKINSON2 & David J GOWER2 1Zoological Society of london, regents Park, london nW1 4RY 2Department of Life Sciences, The Natural History Museum, Cromwell Road, London, SW7 5BD *Corresponding author email: [email protected] ABSTRACT - Maintaining caecilians in captivity provides opportunities to study life-history, behaviour and reproductive biology and to investigate and to develop treatment protocols for amphibian chytridiomycosis. Few species of caecilians are maintained in captivity and little has been published on their husbandry. We present data on substrate preference in a group of eight Central African Geotrypetes seraphini (duméril, 1859). Two substrates were trialled; coir and Megazorb (a waste product from the paper making industry). G. seraphini showed a strong preference for the Megazorb. We anticipate this finding will improve the captive management of this and perhaps also other species of fossorial caecilians, and stimulate evidence-based husbandry practices. INTRODUCTION (Gower & Wilkinson, 2005) and little has been published on the captive husbandry of terrestrial caecilians (Wake, 1994; O’ Reilly, 1996). A basic parameter in terrestrial The paucity of information on caecilian ecology and caecilian husbandry is substrate, but data on tolerances and general neglect of their conservation needs should be of preferences in the wild or in captivity are mostly lacking. concern in light of global amphibian declines (Alford & Terrestrial caecilians are reported from a wide range of Richards 1999; Stuart et al., 2004; Gower & Wilkinson, soil pH (Gundappa et al., 1981; Wake, 1994; Kupfer et 2005).
[Show full text]
3Systematics and Diversity of Extant Amphibians
Systematics and Diversity of 3 Extant Amphibians he three extant lissamphibian lineages (hereafter amples of classic systematics papers. We present widely referred to by the more common term amphibians) used common names of groups in addition to scientifi c Tare descendants of a common ancestor that lived names, noting also that herpetologists colloquially refer during (or soon after) the Late Carboniferous. Since the to most clades by their scientifi c name (e.g., ranids, am- three lineages diverged, each has evolved unique fea- bystomatids, typhlonectids). tures that defi ne the group; however, salamanders, frogs, A total of 7,303 species of amphibians are recognized and caecelians also share many traits that are evidence and new species—primarily tropical frogs and salaman- of their common ancestry. Two of the most defi nitive of ders—continue to be described. Frogs are far more di- these traits are: verse than salamanders and caecelians combined; more than 6,400 (~88%) of extant amphibian species are frogs, 1. Nearly all amphibians have complex life histories. almost 25% of which have been described in the past Most species undergo metamorphosis from an 15 years. Salamanders comprise more than 660 species, aquatic larva to a terrestrial adult, and even spe- and there are 200 species of caecilians. Amphibian diver- cies that lay terrestrial eggs require moist nest sity is not evenly distributed within families. For example, sites to prevent desiccation. Thus, regardless of more than 65% of extant salamanders are in the family the habitat of the adult, all species of amphibians Plethodontidae, and more than 50% of all frogs are in just are fundamentally tied to water.
[Show full text]
Herpetology at the Isthmus Species Checklist
Herpetology at the Isthmus Species Checklist AMPHIBIANS BUFONIDAE true toads Atelopus zeteki Panamanian Golden Frog Incilius coniferus Green Climbing Toad Incilius signifer Panama Dry Forest Toad Rhaebo haematiticus Truando Toad (Litter Toad) Rhinella alata South American Common Toad Rhinella granulosa Granular Toad Rhinella margaritifera South American Common Toad Rhinella marina Cane Toad CENTROLENIDAE glass frogs Cochranella euknemos Fringe-limbed Glass Frog Cochranella granulosa Grainy Cochran Frog Espadarana prosoblepon Emerald Glass Frog Sachatamia albomaculata Yellow-flecked Glass Frog Sachatamia ilex Ghost Glass Frog Teratohyla pulverata Chiriqui Glass Frog Teratohyla spinosa Spiny Cochran Frog Hyalinobatrachium chirripoi Suretka Glass Frog Hyalinobatrachium colymbiphyllum Plantation Glass Frog Hyalinobatrachium fleischmanni Fleischmann’s Glass Frog Hyalinobatrachium valeroi Reticulated Glass Frog Hyalinobatrachium vireovittatum Starrett’s Glass Frog CRAUGASTORIDAE robber frogs Craugastor bransfordii Bransford’s Robber Frog Craugastor crassidigitus Isla Bonita Robber Frog Craugastor fitzingeri Fitzinger’s Robber Frog Craugastor gollmeri Evergreen Robber Frog Craugastor megacephalus Veragua Robber Frog Craugastor noblei Noble’s Robber Frog Craugastor stejnegerianus Stejneger’s Robber Frog Craugastor tabasarae Tabasara Robber Frog Craugastor talamancae Almirante Robber Frog DENDROBATIDAE poison dart frogs Allobates talamancae Striped (Talamanca) Rocket Frog Colostethus panamensis Panama Rocket Frog Colostethus pratti Pratt’s Rocket
[Show full text]
(Bd) Infection in Captive Caecilians
Research article Itraconazole treatment of Batrachochytrium dendrobatidis (Bd) infection in captive caecilians (Amphibia: Gymnophiona) and the first case of Bd in a wild neotropical caecilian Matthew Rendle1, Benjamin Tapley1, Matthew Perkins1, Gabriela Bittencourt-Silva2, David J. Gower3 and Mark Wilkinson3 1Zoological Society of London, Regents Park, London NW1 4RY, UK 2 JZAR Research article Research JZAR Department of Environmental Science (Biogeography), University of Basel, Klingelbergstrasse 27, 4056 Basel, Switzerland 3Department of Life Sciences, The Natural History Museum, London, SW7 5BD, UK *Correspondence: Matthew Rendle; [email protected] Keywords: Abstract chytridiomycosis, Geotrypetes seraphini, Batrachochytrium dendrobatidis (Bd) is the causative agent of the disease amphibian chytridiomycosis, Potomotyphlus kaupii one of the factors driving amphibian population declines. Bd infections are treatable in at least some cases, but in the Gymnophiona has been little reported, and restricted to heat treatment in the form Article history: of increased environmental temperature. We report the successful treatment of Bd infection in the Received: 16 November 2014 terrestrial African caecilian Geotrypetes seraphini and the prophylactic treatment of the aquatic Accepted: 16 October 2015 neotropical caecilian Potomotyphlus kaupii, using 30 minute immersions in a 0.01% solution of the Published online: 30 October 2015 antifungal itraconazole over a period of 11 days. Previously only recorded in wild African Gymnophiona, our report of Bd in P. kaupii is not only the first record of infection in a wild aquatic caecilian but also in a caecilian of neotropical origin. To improve our understanding of the impact of Bd on caecilians, Bd isolates should be obtained from wild caecilians in order to ascertain what lineages of Bd infect this order.
[Show full text]
Feeding in Amphibians: Evolutionary Transformations and Phenotypic Diversity As Drivers of Feeding System Diversity
Chapter 12 Feeding in Amphibians: Evolutionary Transformations and Phenotypic Diversity as Drivers of Feeding System Diversity Anthony Herrel, James C. O’Reilly, Anne-Claire Fabre, Carla Bardua, Aurélien Lowie, Renaud Boistel and Stanislav N. Gorb Abstract Amphibians are different from most other tetrapods because they have a biphasic life cycle, with larval forms showing a dramatically different cranial anatomy and feeding strategy compared to adults. Amphibians with their exceptional diversity in habitats, lifestyles and reproductive modes are also excellent models for studying the evolutionary divergence in feeding systems. In the present chapter, we review the literature on amphibian feeding anatomy and function published since 2000. We also present some novel unpublished data on caecilian feeding biome- chanics. This review shows that over the past two decades important new insights in our understanding of amphibian feeding anatomy and function have been made possible, thanks to a better understanding of the phylogenetic relationships between taxa, analyses of development and the use of biomechanical modelling. In terms of functional analyses, important advances involve the temperature-dependent nature of tongue projection mechanisms and the plasticity exhibited by animals when switch- A. Herrel (B) Département Adaptations du Vivant, Muséum national d’Histoire naturelle, UMR 7179 C.N.R.S/M.N.H.N, 55 rue Buffon, 75005, Paris Cedex 05, France e-mail: [email protected] J. C. O’Reilly Department of Biomedical Sciences, Ohio University, Cleveland Campus, Cleveland, Ohio 334C, USA A.-C. Fabre · C. Bardua Life Sciences Department, The Natural History Museum, Cromwell Road, London SW7 5BD, UK A. Lowie Department of Biology Evolutionary, Morphology of Vertebrates, Ghent University, K.L.
[Show full text]
Population Genetics of the SaÕ Tome´ Caecilian (Gymnophiona: Dermophiidae: Schistometopum Thomense) Reveals Strong Geographic Structuring
Population Genetics of the Saõ Tome´ Caecilian (Gymnophiona: Dermophiidae: Schistometopum thomense) Reveals Strong Geographic Structuring Ricka E. Stoelting1,2*, G. John Measey3, Robert C. Drewes1 1 Department of Herpetology, California Academy of Sciences, San Francisco, California, United States of America, 2 Department of Forest and Wildlife Ecology, University of Wisconsin, Madison, Wisconsin, United States of America, 3 Centre for Invasion Biology, Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, South Africa Abstract Islands provide exciting opportunities for exploring ecological and evolutionary mechanisms. The oceanic island of Saõ Tome´ in the Gulf of Guinea exhibits high diversity of fauna including the endemic caecilian amphibian, Schistometopum thomense. Variation in pigmentation, morphology and size of this taxon over its c. 45 km island range is extreme, motivating a number of taxonomic, ecological, and evolutionary hypotheses to explain the observed diversity. We conducted a population genetic study of S. thomense using partial sequences of two mitochondrial DNA genes (ND4 and 16S), together with morphological examination, to address competing hypotheses of taxonomic or clinal variation. Using Bayesian phylogenetic analysis and Spatial Analysis of Molecular Variance, we found evidence of four geographic clades, whose range and approximated age (c. 253 Kya – 27 Kya) are consistent with the spread and age of recent volcanic flows. These clades explained 90% of variation in ND4 (QCT = 0.892), and diverged by 4.3% minimum pairwise distance at the deepest node. Most notably, using Mismatch Distributions and Mantel Tests, we identified a zone of population admixture that dissected the island. In the northern clade, we found evidence of recent population expansion (Fu’s Fs = 213.08 and Tajima’s D = 21.80) and limited dispersal (Mantel correlation coefficient = 0.36, p = 0.01).
[Show full text]