Freshwater Biodiversity
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Critical Habitat for Canterbury Freshwater Fish, Kōura/Kēkēwai and Kākahi
CRITICAL HABITAT FOR CANTERBURY FRESHWATER FISH, KŌURA/KĒKĒWAI AND KĀKAHI REPORT PREPARED FOR CANTERBURY REGIONAL COUNCIL BY RICHARD ALLIBONE WATERWAYS CONSULTING REPORT NUMBER: 55-2018 AND DUNCAN GRAY CANTERBURY REGIONAL COUNCIL DATE: DECEMBER 2018 EXECUTIVE SUMMARY Aquatic habitat in Canterbury supports a range of native freshwater fish and the mega macroinvertebrates kōura/kēkēwai (crayfish) and kākahi (mussel). Loss of habitat, barriers to fish passage, water quality and water quantity issues present management challenges when we seek to protect this freshwater fauna while providing for human use. Water plans in Canterbury are intended to set rules for the use of water, the quality of water in aquatic systems and activities that occur within and adjacent to aquatic areas. To inform the planning and resource consent processes, information on the distribution of species and their critical habitat requirements can be used to provide for their protection. This report assesses the conservation status and distributions of indigenous freshwater fish, kēkēwai and kākahi in the Canterbury region. The report identifies the geographic distribution of these species and provides information on the critical habitat requirements of these species and/or populations. Water Ways Consulting Ltd Critical habitats for Canterbury aquatic fauna Table of Contents 1 Introduction ......................................................................................................................................... 1 2 Methods .............................................................................................................................................. -
A Global Assessment of Parasite Diversity in Galaxiid Fishes
diversity Article A Global Assessment of Parasite Diversity in Galaxiid Fishes Rachel A. Paterson 1,*, Gustavo P. Viozzi 2, Carlos A. Rauque 2, Verónica R. Flores 2 and Robert Poulin 3 1 The Norwegian Institute for Nature Research, P.O. Box 5685, Torgarden, 7485 Trondheim, Norway 2 Laboratorio de Parasitología, INIBIOMA, CONICET—Universidad Nacional del Comahue, Quintral 1250, San Carlos de Bariloche 8400, Argentina; [email protected] (G.P.V.); [email protected] (C.A.R.); veronicaroxanafl[email protected] (V.R.F.) 3 Department of Zoology, University of Otago, P.O. Box 56, Dunedin 9054, New Zealand; [email protected] * Correspondence: [email protected]; Tel.: +47-481-37-867 Abstract: Free-living species often receive greater conservation attention than the parasites they support, with parasite conservation often being hindered by a lack of parasite biodiversity knowl- edge. This study aimed to determine the current state of knowledge regarding parasites of the Southern Hemisphere freshwater fish family Galaxiidae, in order to identify knowledge gaps to focus future research attention. Specifically, we assessed how galaxiid–parasite knowledge differs among geographic regions in relation to research effort (i.e., number of studies or fish individuals examined, extent of tissue examination, taxonomic resolution), in addition to ecological traits known to influ- ence parasite richness. To date, ~50% of galaxiid species have been examined for parasites, though the majority of studies have focused on single parasite taxa rather than assessing the full diversity of macro- and microparasites. The highest number of parasites were observed from Argentinean galaxiids, and studies in all geographic regions were biased towards the highly abundant and most widely distributed galaxiid species, Galaxias maculatus. -
Rediscovering the Species in Community-Wide Predictive Modeling
Ecological Applications, 16(4), 2006, pp. 1449–1460 Ó 2006 by the the Ecological Society of America REDISCOVERING THE SPECIES IN COMMUNITY-WIDE PREDICTIVE MODELING 1,3 2 2 JULIAN D. OLDEN, MICHAEL K. JOY, AND RUSSELL G. DEATH 1Center for Limnology, University of Wisconsin–Madison, 680 N. Park Street, Madison, Wisconsin 53706 USA 2Institute of Natural Resources–Ecology, Massey University, Private Bag 11 222, Palmerston North, New Zealand Abstract. Broadening the scope of conservation efforts to protect entire communities provides several advantages over the current species-specific focus, yet ecologists have been hampered by the fact that predictive modeling of multiple species is not directly amenable to traditional statistical approaches. Perhaps the greatest hurdle in community-wide modeling is that communities are composed of both co-occurring groups of species and species arranged independently along environmental gradients. Therefore, commonly used ‘‘short-cut’’ methods such as the modeling of so-called ‘‘assemblage types’’ are problematic. Our study demonstrates the utility of a multiresponse artificial neural network (MANN) to model entire community membership in an integrative yet species-specific manner. We compare MANN to two traditional approaches used to predict community composition: (1) a species-by-species approach using logistic regression analysis (LOG) and (2) a ‘‘classification-then-modeling’’ approach in which sites are classified into assemblage ‘‘types’’ (here we used two-way indicator species analysis and multiple discriminant analysis [MDA]). For freshwater fish assemblages of the North Island, New Zealand, we found that the MANN outperformed all other methods for predicting community composition based on multiscaled descriptors of the environment. -
Multiple Scales of Biological Variability in New Zealand Streams
Copyright is owned by the Author of the thesis. Permission is given for a copy to be downloaded by an individual for the purpose of research and private study only. The thesis may not be reproduced elsewhere without the permission of the Author. Multiple scales of biological variability in New Zealand streams A thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Ecology at Massey University, Manawatū, New Zealand. Withanage Thushantha Sriyan Jayasuriya 2016 ii General Abstract Stream fish communities in Taranaki, New Zealand, were studied for the patterns and drivers of their spatial ecology. The study was focused on three main themes: a) complementarity between geography and landuse in driving regional distribution patterns of stream fish, b) the impact of agriculture on community composition, structure and variability of fish and invertebrates, and c) concordance among environmental distance and community dissimilarities of stream fish and invertebrates. Stream sampling and data collection for fish was conducted at regional scale using 96 sites distributed in the protected forest (44 sites) of Egmont National Park in Taranaki, and in surrounding farmlands (52 sites). Local scale sampling for fish and invertebrates was carried out at 15 stream sites in pasture (8 sites) and in adjacent forest (7 sites). Environmental data of geography, landuse and local habitat description were also gathered concurrently to biological sampling. The regional scale survey reported fifteen fish species, dominated by longfin eels (Anguilla dieffenbachia), redfin bullies (Gobiomorphus huttoni) and koaro (Galaxias brevipinnis), while 12 fish species and 69 different invertebrate taxa were recorded from the 15 sites at local scale. -
Freshwater Fish Taxonomic Workshop Focussing on New Zealand Non- Migratory Galaxias Taxonomic Issues
Freshwater fish taxonomic workshop Focussing on New Zealand non- migratory galaxias taxonomic issues Proceedings compiled by: Sjaan Bowie, Lan Pham, Nicholas Dunn, Richard Allibone, and Shannan Crow How to cite this document: Bowie, S. Pham, L, Dunn, N, Allibone, R, & Crow, S. (Eds) 2014: Freshwater fish taxonomic workshop focussing on New Zealand non-migratory galaxias taxonomic issues. Proceedings of a workshop, Dunedin 14th May 2013. Unpublished DOC publication. Christchurch. © Copyright May 2014, New Zealand Department of Conservation DOCDM-1205404 In the interest of forest conservation, we support paperless electronic publishing. CONTENTS 1. Introduction ................................................................................................................. 4 2. Overview of genetic and morphological data used for current non- migratory galaxias groupings .................................................................................... 5 2.1 Background ........................................................................................................... 5 2.2 Workshop group conclusion ................................................................................. 7 2.3 Non-migratory galaxias data management ........................................................... 7 3. Groupings of non-migratory Galaxias ....................................................................... 8 3.1 Background ........................................................................................................... 8 3.2 New Zealand -
Lethal Turbidity Levels for Common Fish and Invertebrates in Auckland
Lethal Turbidity Levels for Common Fish and Invertebrates in Auckland Streams June 2002 TP337 Auckland Regional Council Technical Publication No. 337, 2002 ISSN 1175-205X" ISBN -13 : 978-1-877416-78-1 ISBN -10 : 1877416-78-9 Printed on recycled paper Lethal turbidity levels for common freshwater fish and invertebrates in Auckland streams D. K. Rowe A. M. Suren M. Martin J. P. Smith B. Smith E. Williams Prepared for Auckland Regional Council Information contained within this report should not be used without the prior consent of the client NIWA Client Report: ARC02283 June 2002 National Institute of Water & Atmospheric Research Ltd Gate 10, Silverdale Road, Hamilton P O Box 11115, Hamilton, New Zealand Phone +64-7-856 7026, Fax +64-7-856 0151 www.niwa.co.nz Acknowledgements We would like to thank John Maxted (and his staff) for supplying the clay used for testing, as well as for his guidance on invertebrate selection and important aspects of the study’s design. Recommended Citation: Rowe, D.K., et. al. (2002). Lethal turbidity levels for common freshwater fish and invertebrates in Auckland streams. Auckland Regional Council Technical Publication Number 337. 37 p. CONTENTS 1.1.1. Executive Summary 111 2.2.2. Introduction 222 3.3.3. Sediment Characterisation 444 4.4.4. Effects Of Turbidity On Fish 666 4.1 Fish selection, collection and acclimation 6 4.2 Experimental methods 6 4.3 Data analysis 9 4.4 Results 10 4.5 Discussion 19 5.5.5. Effects of Turbidity on InvInvertebratesertebrates 222222 5.1 Choice of invertebrate species 22 5.2 Experimental methods 23 5.3 Results 26 5.4 Discussion 28 666 Conclusions 313131 777 Recommendations 323232 888 References 333333 Reviewed by: Approved for release by: Mike Scarsbrook Jody Richardson TP 337 - Lethal Turbidity Levels For Common Freshwater Fish and Invertebrates in Auckland Streams 2 1. -
Migratory Flexibility in Native Hawai'ian Amphidromous Fishes
Received: 29 August 2019 Accepted: 5 December 2019 DOI: 10.1111/jfb.14224 REGULAR PAPER FISH Migratory flexibility in native Hawai'ian amphidromous fishes Heidi Heim-Ballew1 | Kristine N. Moody2 | Michael J. Blum2 | Peter B. McIntyre3,4 | James D. Hogan1 1Department of Life Sciences, Texas A&M University-Corpus Christi, Corpus Christi, Abstract Texas, USA We assessed the prevalence of life history variation across four of the five native 2 Department of Ecology and Evolutionary amphidromous Hawai'ian gobioids to determine whether some or all exhibit evidence Biology, University of Tennessee-Knoxville, Knoxville, Tennessee, USA of partial migration. Analysis of otolith Sr.: Ca concentrations affirmed that all are 3Center for Limnology, University of amphidromous and revealed evidence of partial migration in three of the four spe- Wisconsin – Madison, Madison, Wisconsin, USA cies. We found that 25% of Lentipes concolor (n= 8), 40% of Eleotris sandwicensis 4Department of Natural Resources, (n=20) and 29% of Stenogobius hawaiiensis (n=24) did not exhibit a migratory life- Cornell University, Ithaca, New York, history. In contrast, all individuals of Sicyopterus stimpsoni (n= 55) included in the USA study went to sea as larvae. Lentipes concolor exhibited the shortest mean larval dura- Correspondence tion (LD) at 87 days, successively followed by E. sandwicensis (mean LD = 102 days), Heidi Heim-Ballew, Department of Life Sciences, Texas A&M University-Corpus S. hawaiiensis (mean LD = 114 days) and S. stimpsoni (mean LD = 120 days). These Christi, 6300 Ocean Drive, Unit 5800, Corpus findings offer a fresh perspective on migratory life histories that can help improve Christi TX, 78412, USA. -
The Parasite Release Hypothesis and the Success of Invasive Fish in New Zealand
http://researchcommons.waikato.ac.nz/ Research Commons at the University of Waikato Copyright Statement: The digital copy of this thesis is protected by the Copyright Act 1994 (New Zealand). The thesis may be consulted by you, provided you comply with the provisions of the Act and the following conditions of use: Any use you make of these documents or images must be for research or private study purposes only, and you may not make them available to any other person. Authors control the copyright of their thesis. You will recognise the author’s right to be identified as the author of the thesis, and due acknowledgement will be made to the author where appropriate. You will obtain the author’s permission before publishing any material from the thesis. The parasite release hypothesis and the success of invasive fish in New Zealand A thesis submitted in partial fulfilment of the requirements for the degree of Master of Science in Biological Science at The University of Waikato by Keshi Zhang The University of Waikato 2012 Abstract Non-indigenous species are commonly released from their native enemies, including parasites, when they are introduced into new geographical areas. This has been referred to as the enemy release hypothesis and more strictly as the parasite release hypothesis. The loss of parasites is commonly inferred to explain the invasiveness of non-indigenous species. I examined parasite release in New Zealand non-indigenous freshwater fishes. A literature review was undertaken in order to collate lists of the known parasite fauna of 20 New Zealand non-indigenous freshwater fish species. -
Relationships of Lower Euteleostean Fishes
CHAPTER 12 Relationships of Lower Euteleostean Fishes G. DAVID JOHNSON COLIN PATTERSON National Museum of Natural History Natural History Museum Smithsonian Institution London, England Washington, D.C.- We all make mistakes; then we're sorry. What are the relationships of and within the Os- Popular song meroidei? (6) What are the relationships of and within Salmonidae? (7) Where does Lepidogalaxias belong? (8) What are the relationships within stomiiform fishes? (9) What of the Myctophoidei, as recognized by I. Introduction Greenwood et al. (1966, i.e., Aulopiformes and Myc- tophiformes in current terminology)? In that agenda, In the first Interrelationships of Fishes lower eutel- items (8) and (9) are treated elsewhere in this volume eosts, or "protacanthopterygians" as they were then and do not concern us, but items (1) through (7) do. called, were omitted, with only a comment in the Some classifications and/or cladograms of lower eu- Preface citing Weitzman (1967, on osmeroids and teleosts, dating back to the first application of cladistic stomiatoids), McDowall (1969, on osmeroids and ga- method, are summarized in Fig. 1. As is obvious from laxioids), Rosen and Greenwood (1970, on gonoryn- incongruence between all the patterns in Fig. 1, there chiforms and ostariophysans), Greenwood and Rosen has been protracted argument on how lower euteleos- (1971, on argentinoids and alepocephaloids), and Nel- tean groups are interrelated, how they are related to son (1970b, on salangids and argentinids; 1972, on neoteleosts (stomiiforms and eurypterygians, John- esocoids and galaxioids). son, 1992), and what group is basal to other euteleosts. Ten years later, in Ontogeny and Systematics of Fishes, The most substantial treatment of these problems is Fink (1984a) summarized the history of protacantho- in Begle's (1991,1992) cladistic analyses of Osmeroidei pterygians as "erosion" and "attrition, most notably (1991) and Argentinoidei (1992) (Fig. -
Identifying Migration Flexibility and the Environmental Factors That Influence Variation in Recruitment Success in Partially Migratory Hawaiian Fishes
IDENTIFYING MIGRATION FLEXIBILITY AND THE ENVIRONMENTAL FACTORS THAT INFLUENCE VARIATION IN RECRUITMENT SUCCESS IN PARTIALLY MIGRATORY HAWAIIAN FISHES A Dissertation by HEIDI HEIM-BALLEW BS, Texas A&M University-Corpus Christi, 2015 Submitted in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY in MARINE BIOLOGY Texas A&M University-Corpus Christi Corpus Christi, Texas May 2019 © Heidi Elizabeth Mae Ballew All Rights Reserved May 2019 IDENTIFYING MIGRATION FLEXIBILITY AND THE ENVIRONMENTAL FACTORS THAT INFLUENCE VARIATION IN RECRUITMENT SUCCESS IN PARTIALLY MIGRATORY HAWAIIAN FISHES A Dissertation by HEIDI HEIM-BALLEW This dissertation meets the standards for scope and quality of Texas A&M University-Corpus Christi and is hereby approved. J. Derek Hogan, PhD Chair David Portnoy, PhD Jennifer Pollack, PhD Committee Member Committee Member Benjamin D. Walther Kent Byus, PhD Committee Member Graduate Faculty Representative May 2019 ABSTRACT Behavior flexibility during the larval stage influences differential mortality, recruitment, and population dynamics; recruitment is poorly understood, yet important for understanding population persistence. The purpose of this dissertation was to examine fishes for migration flexibility and to identify factors at different spatiotemporal scales that are influential to differential survival within and across populations. I found that four underexplored native freshwater fishes of Hawai‘i exhibited a larval migratory strategy, but many were flexible. One species (Sicyopterus stimpsoni) showed all individuals made a migration, and the others showed 25 – 40 % did not migrate. Next, I examined if migrant (S. stimpsoni) and flexible species (Awaous stamineus) showed lunar rhythmicity at hatching and settlement. Migrants of the flexible species showed more hatching around the full moon and settlement around the new moon, and residents showed the opposite pattern. -
Fish Remains, Mostly Otoliths, from the Non−Marine Early Miocene of Otago, New Zealand
Fish remains, mostly otoliths, from the non−marine early Miocene of Otago, New Zealand WERNER SCHWARZHANS, R. PAUL SCOFIELD, ALAN J.D. TENNYSON, JENNIFER P. WORTHY, and TREVOR H. WORTHY Schwarzhans, W., Scofield, R.P., Tennyson, A.J.D., Worthy, J.P., and Worthy, T.H. 2012. Fish remains, mostly otoliths, from the non−marine early Miocene of Otago, New Zealand. Acta Palaeontologica Polonica 57 (2): 319–350. Fish remains described from the early Miocene lacustrine Bannockburn Formation of Central Otago, New Zealand, con− sist of several thousand otoliths and one skeleton plus another disintegrated skull. One species, Mataichthys bictenatus Schwarzhans, Scofield, Tennyson, and T. Worthy gen. et sp. nov., an eleotrid, is established on a skeleton with otoliths in situ. The soft embedding rock and delicate, three−dimensionally preserved fish bones were studied by CT−scanning tech− nology rather than physical preparation, except where needed to extract the otolith. Fourteen species of fishes are de− scribed, 12 new to science and two in open nomenclature, representing the families Galaxiidae (Galaxias angustiventris, G. bobmcdowalli, G. brevicauda, G. papilionis, G. parvirostris, G. tabidus), Retropinnidae (Prototroctes modestus, P. vertex), and Eleotridae (Mataichthys bictenatus, M. procerus, M. rhinoceros, M. taurinus). These findings prove that most of the current endemic New Zealand/southern Australia freshwater fish fauna was firmly established in New Zea− land as early as 19–16 Ma ago. Most fish species indicate the presence of large fishes, in some cases larger than Recent species of related taxa, for instance in the eleotrid genus Mataichthys when compared to the extant Gobiomorphus. The finding of a few otoliths from marine fishes corroborates the age determination of the Bannockburn Formation as the Altonian stage of the New Zealand marine Tertiary stratigraphy. -
The Influence of Exotic Salmonids on Native Host-Parasite Dynamics
The influence of exotic salmonids on native host-parasite dynamics Rachel A. Paterson A thesis submitted for the degree of Doctor of Philosophy at the University of Otago, Dunedin, New Zealand December 2010 ii Summary Native parasite acquisition provides introduced species with the potential to modify native host-parasite dynamics by acting as parasite reservoirs (with the ‘spillback’ of infection increasing the parasite burdens of native hosts) or sinks (with the ‘dilution’ of infection decreasing the parasite burdens of native hosts) of infection. Exotic salmonids are frequently shown to acquire native parasites; however, as research into the threats posed by exotic salmonids has largely focused on predation and competition, threats posed by shared native parasites are poorly understood. I used a multiple-pronged approach combining field observations, experimental infections and dynamic population modelling to investigate whether native parasite acquisition by exotic salmonids alters host-parasite dynamics in native fish populations from streams and lakes in New Zealand and Argentina. I also used a meta-analysis approach to investigate which trait(s) influence native parasite acquisition by exotic freshwater fish. My research demonstrated that two key factors strongly influence whether the dynamics of native parasites will be affected by exotic fish. On one hand, the competency of exotic fish for native parasites is an important determinant of whether native parasite populations are likely to increase or decrease. On the other hand, the relative abundance of the exotic species determines whether its competency for a native parasite will actually translate into altered native host-parasite dynamics, with highly abundant exotic species more likely to induce changes in native parasite dynamics.