The Golgi Apparatus: Morphology and Function with Recent Facts
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Common Features of All Cells Bacterial
www.denniskunkel.com Tour of the Cell part 1 Today’s Topics • Finish Nucleic Acids Cells • Properties of all cells – Prokaryotes and Eukaryotes • Functions of Major Cellular Organelles – Information – Synthesis&Transport – Energy Conversion – Recycling – Structure and Movement Bacterial cell Animal Cell 9/12/12 (Prokaryote) (Eukaryote) 2 www.denniskunkel.com Common features of all cells • Plasma Membrane – defines inside from outside • Cytosol – Semifluid “inside” of the cell • DNA “chromosomes” - Genetic material – hereditary instructions • Ribosomes – “factories” to synthesize proteins 4 Plasma membrane Bacterial (Prokaryotic) Cell Ribosomes! Plasma membrane! Bacterial Cell wall! chromosome ! Phospholipid bilayer Proteins 0.5 !m! Flagella! No internal membranes 5 6 1 Figure 6.2b 1 cm Eukaryotic Cell Frog egg 1 mm Human egg 100 µm Most plant and animal cells 10 m µ Nucleus Most bacteria Light microscopy Mitochondrion 1 µm Super- 100 nm Smallest bacteria Viruses resolution microscopy Ribosomes 10 nm Electron microscopy Proteins Lipids 1 nm Small molecules Contains internal organelles 7 0.1 nm Atoms endoplasmicENDOPLASMIC RETICULUM reticulum (ER) ENDOPLASMIC RETICULUM (ER) NUCLEUS NUCLEUS Rough ER Smooth ER nucleus Rough ER Smooth ER Nucleus Plasma membrane Plasma membrane Centrosome Centrosome cytoskeletonCYTOSKELETON CYTOSKELETON Microfilaments You should Microfilaments Intermediate filaments know everything Intermediate filaments Microtubules in Fig 6.9 ribosomesRibosomes Microtubules Ribosomes cytosol GolgiGolgi apparatus apparatus Golgi apparatus Peroxisome Peroxisome In animal cells but not plant cells: In animal cells but not plant cells: Lysosome Lysosomes Lysosome Lysosomes Figure 6.9 Centrioles Figure 6.9 Centrioles Mitochondrion lysosome Flagella (in some plant 9sperm) Mitochondrion Flagella (in some plant10 sperm) mitochondrion Nuclear envelope Nucleus Nucleus 1 !m Nucleolus Chromatin Nuclear envelope: Inner membrane Outer membrane Pores Pore complex Rough ER Surface of nuclear envelope. -
Phosphatases and Differentiation of the Golgi Apparatus
J. Cell Sci. 4, 455-497 (1969) 455 Printed in Great Britain PHOSPHATASES AND DIFFERENTIATION OF THE GOLGI APPARATUS MARIANNE DAUWALDER, W. G. WHALEY AND JOYCE E. KEPHART The Cell Research Institute, Tlie University of Texas at Austin, Texas, U.S.A. SUMMARY Cytochemical techniques for the electron microscopic localization of inosine diphosphatase, thiamine pyrophosphatase, and acid phosphatase have been applied to the developing root tip of Zea mays. Following formaldehyde fixation the Golgi apparatus of most of the cells showed reaction specificity for IDPase and TPPase. Following glutaraldehyde fixation marked localiza- tion of IDPase reactivity in the Golgi apparatus was limited to the root cap, the epidermis, and the phloem. A parallelism was apparent between the sequential morphological development of the apparatus for the secretion of a polysaccharide product, the fairly direct incorporation of tritiated glucose into the apparatus to become a component of this product and the develop- ment of the enzyme reactivity. Acid phosphatase, generally accepted as a lysosomal marker, was found in association with the Golgi apparatus in only a few cell types near the apex of the root. The localization was usually in a single cisterna at the face of the apparatus toward which the production of secretory vesicles builds up and associated regions of what may be smooth endoplasmic reticulum. Since the cell types involved were limited regions of the cap and epidermis and some initial cells, no functional correlates of the reactivity were apparent. Despite the presence of this lysosomal marker, no structures clearly identifiable as ' lysosomes' were found and the lack of reaction specificity in the vacuoles did not allow them to be so defined. -
Intracellular Transport of Influenza Virus Hemagglutinin to the Apical Surface of Madin-Darby Canine Kidney Cells
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by PubMed Central Intracellular Transport of Influenza Virus Hemagglutinin to the Apical Surface of Madin-Darby Canine Kidney Cells ENRIQUE RODRIGUEZ-BOULAN, KEVIN T . PASKIET, PEDRO J. I . SALAS, and ENZO BARD Department of Pathology, Downstate Medical Center, State University of New York, Brooklyn, New York 11203 ABSTRACT The intracellular pathway followed by the influenza virus hemagglutinin (HA) to the apical surface of Madin-Darby canine kidney cells was studied by radioimmunoassay, immunofluorescence, and immunoelectron microscopy. To synchronize the migration, we used a temperature-sensitive mutant of influenza WSN, ts61, which, at the nonpermissive temperature, 39.5°C, exhibits a defect in the HA that prevents its exit from the endoplasmic reticulum . Upon transfer to permissive temperature, 32°C, the HA appeared in the Golgi apparatus after 10 min, and on the apical surface after 30-40 min. In the presence of cycloheximide, the expression was not inhibited, indicating that the is defect is reversible; a wave of HA migrated to the cell surface, where it accumulated with a half time of 60 min . After passage through the Golgi apparatus the HA was detected in a population of smooth vesicles, about twice the size of coated vesicles, located in the apical half of the cytoplasm . These HA-containing vesicles did not react with anti-clathrin antibodies . Monensin (10 'UM) delayed the surface appearance of HA by 2 h, but not the transport to the Golgi apparatus. Incubation at 20°C retarded the migration to the Golgi apparatus by ^-30 min and blocked the surface appearance by acting at a late stage in the intracellular pathway, presumably at the level of the post-Golgi vesicles. -
3 Saccharomyces Cell Structure
Genetic Techniques for Biological Research Corinne A. Michels Copyright q 2002 John Wiley & Sons, Ltd ISBNs: 0-471-89921-6 (Hardback); 0-470-84662-3 (Electronic) 3 Saccharomyces Cell Structure Saccharomycescerevisiue is aeukaryote and as such containsthe subcellular organelles commonlyfound in eukaryotes.The structure and function of these organelles is fundamentally the same as it is in other eukaryotes with less versatile systems for genetic analysis, and for this reason Saccharomyces is the organism of choice for many cell biologists. For a truly in-depth review of Saccharomyces cell structure and function, the reader is referred to The Molecular and Cellular Biology of theYeast Saccharomyces: Vol. 3: CellCycle and Cell Biology (Broach etal., 1997). The discussion here will provide a very brief overview of the cell structure and will focus on certain unique features of Saccharomyces cell structure in order to facilitate reading of the literature. CELL SHAPE AND GROWTH PATTERNS Underusual culture conditions, Saccharomyces is ellipsoidaUovoid in shapeand approximately 5-10 pm long by 3-7 pm wide. This is referred to as the yeast form. Figure 3.1 shows a scanning electron micrograph (SEM) of a cell in the yeast form. Cell division is by budding; that is, a smaller ovoid daughter cell formsas a projection from the surface of the mother cell. Haploid cells are generally about one-half the volume of diploid cells. The characteristic shape is maintained by a rigid cell wall that completely surrounds the plasma membrane of Saccharomyces. Changes in this shape involve remodeling of the cell wall and occur during budding, mating,and pseudohyphal differentiation. -
Written Response #5
Written Response #5 • Draw and fill in the chart below about three different types of cells: Written Response #6-18 • In this true/false activity: • You and your partner will discuss the question, each of you will record your response and share your answer with the class. Be prepared to justify your answer. • You are allow to search answers. • You will be limited to 20 seconds per question. Written Response #6-18 6. The water-hating hydrophobic tails of the phospholipid bilayer face the outside of the cell membrane. 7. The cytoplasm essentially acts as a “skeleton” inside the cell. 8. Plant cells have special structures that are not found in animal cells, including a cell wall, a large central vacuole, and plastids. 9. Centrioles help organize chromosomes before cell division. 10. Ribosomes can be found attached to the endoplasmic reticulum. Written Response #6-18 11. ATP is made in the mitochondria. 12. Many of the biochemical reactions of the cell occur in the cytoplasm. 13. Animal cells have chloroplasts, organelles that capture light energy from the sun and use it to make food. 14. Small hydrophobic molecules can easily pass through the plasma membrane. 15. In cell-level organization, cells are not specialized for different functions. Written Response #6-18 16. Mitochondria contains its own DNA. 17. The plasma membrane is a single phospholipid layer that supports and protects a cell and controls what enters and leaves it. 18. The cytoskeleton is made from thread-like filaments and tubules. 3.2 HW 1. Describe the composition of the plasma membrane. -
The Mechanics of Intracellular Transport
Developmental Cell Previews Cutting through the Noise: The Mechanics of Intracellular Transport Samantha Stam1,2 and Margaret L. Gardel2,3,* 1Biophysical Sciences Graduate Program, University of Chicago, Chicago, IL 60637, USA 2James Franck Institute and Institute for Biophysical Dynamics, University of Chicago, Chicago, IL 60637, USA 3Department of Physics, University of Chicago, Chicago, IL 60637, USA *Correspondence: [email protected] http://dx.doi.org/10.1016/j.devcel.2014.08.013 Intracellular transport of organelles and proteins is driven by multiple ATP-dependent processes. Recently in Cell, Guo et al. (2014) developed a technique, force-spectrum microscopy, to measure intracellular forces and demonstrate that large motion of cellular components can be produced by random ATP-dependent fluc- tuations within the cytoplasm. Intracellular transport is crucial to diverse mechanisms, and they overcome the Here, Guo et al. (2014) provide the physiological tasks. The cell employs limitations of diffusive transport in at first measurements to directly charac- multiple mechanisms to meet the de- least two distinct ways. One well-appre- terize these ATP-dependent yet random mands of rapidly transporting cell con- ciated mechanism is that molecular forces within the cytoplasm. The authors tents of varying size over large distances, motor proteins drive directed transport measured the mechanics of the cyto- ranging from microns to up to a meter, to of attached cargo along filament tracks plasm using optical tweezers to apply support specific physiological tasks (Figure 1C, blue and black) (Howard, forces to inert particles microinjected (Figure 1A). In a recent issue of Cell, Guo 2001). Motors transport cargo along into the cytoplasm. -
Fluorescence Microscopy Applied to Intracellular Transport by Microtubule Motors
J Biosci Vol. 43, No. 3, July 2018, pp. 437–445 Ó Indian Academy of Sciences DOI: 10.1007/s12038-018-9765-2 Fluorescence microscopy applied to intracellular transport by microtubule motors 1 2 1 DIVYA PATHAK ,SHREYASI THAKUR and ROOP MALLIK * 1Department of Biological Sciences, Tata Institute of Fundamental Research, Mumbai 400005, India 2Department of Physiology, University of Pennsylvania, Philadelphia, PA 19104, USA *Corresponding author (Email, [email protected]) Published online: 25 May 2018 Long-distance transport of many organelles inside eukaryotic cells is driven by the dynein and kinesin motors on microtubule filaments. More than 30 years since the discovery of these motors, unanswered questions include motor– organelle selectivity, structural determinants of processivity, collective behaviour of motors and track selection within the complex cytoskeletal architecture, to name a few. Fluorescence microscopy has been invaluable in addressing some of these questions. Here we present a review of some efforts to understand these sub-microscopic machines using fluorescence. Keywords. Dynein; fluorescence; kinesin; motor proteins; myosin 1. Background observe motors navigating the complex cytoskeleton. Fluo- rescent labelling also shows that both dynein and kinesin are Intracellular transport of vesicles was first inferred from present on the cargo, but how do these antagonistic motors ligatures of sciatic nerve where swelling was observed on work together is a matter of much debate (Hancock 2014). either sides of the ligature (Grafstein -
The Ultrastructure of Spermatozoa and Spermiogenesis in Pyramidellid Gastropods, and Its Systematic Importance John M
HELGOLANDER MEERESUNTERSUCHUNGEN Helgol~inder Meeresunters. 42,303-318 (1988) The ultrastructure of spermatozoa and spermiogenesis in pyramidellid gastropods, and its systematic importance John M. Healy School of Biological Sciences (Zoology, A08), University of Sydney; 2006, New South Wales, Australia ABSTRACT: Ultrastructural observations on spermiogenesis and spermatozoa of selected pyramidellid gastropods (species of Turbonilla, ~gulina, Cingufina and Hinemoa) are presented. During spermatid development, the condensing nucleus becomes initially anterio-posteriorly com- pressed or sometimes cup-shaped. Concurrently, the acrosomal complex attaches to an electron- dense layer at the presumptive anterior pole of the nucleus, while at the opposite (posterior) pole of the nucleus a shallow invagination is formed to accommodate the centriolar derivative. Midpiece formation begins soon after these events have taken place, and involves the following processes: (1) the wrapping of individual mitochondria around the axoneme/coarse fibre complex; (2) later internal metamorphosis resulting in replacement of cristae by paracrystalline layers which envelope the matrix material; and (3) formation of a glycogen-filled helix within the mitochondrial derivative (via a secondary wrapping of mitochondria). Advanced stages of nuclear condensation {elongation, transformation of fibres into lamellae, subsequent compaction) and midpiece formation proceed within a microtubular sheath ('manchette'). Pyramidellid spermatozoa consist of an acrosomal complex (round -
Studies on the Mechanisms of Autophagy: Formation of the Autophagic Vacuole W
Studies on the Mechanisms of Autophagy: Formation of the Autophagic Vacuole W. A. Dunn, Jr. Department of Anatomy and Cell Biology, University of Florida College of Medicine, Gainesville, Florida 32610 Abstract. Autophagic vacuoles form within 15 min of tophagic vacuoles. All these results suggested that au- perfusing a liver with amino acid-depleted medium. tophagic vacuoles were not formed from plasma mem- These vacuoles are bound by a "smooth" double mem- brane, Golgi apparatus, or endosome constituents. An- brane and do not contain acid phosphatase activity. In tisera prepared against integral membrane proteins (14, Downloaded from http://rupress.org/jcb/article-pdf/110/6/1923/1059547/1923.pdf by guest on 26 September 2021 an attempt to identify the membrane source of these 25, and 40 kD) of the RER was found to label the in- vacuoles, I have used morphological techniques com- ner and outer limiting membranes of almost all na- bined with immunological probes to localize specific scent autophagic vacuoles. In addition, ribophorin II membrane antigens to the limiting membranes of was identified at the limiting membranes of many na- newly formed or nascent autophagic vacuoles. Anti- scent autophagic vacuoles. Finally, secretory proteins, bodies to three integral membrane proteins of the rat serum albumin and alpha2o-globulin, were localized plasma membrane (CE9, HA4, and epidermal growth to the lumen of the RER and to the intramembrane factor receptor) and one of the Golgi apparatus space between the inner and outer membranes of some (sialyltransferase) did not label these vacuoles. Inter- of these vacuoles. The results were consistent with the nalized epidermal growth factor and its membrane formation of autophagic vacuoles from ribosome-free receptor were not found in nascent autophagic vacu- regions of the RER. -
Intracellular Transport in Eukaryotes
Intracellular transport in eukaryotes Overview Compartmentalization and inner membranes enables eukaryotic cells • to be 1000-10000 times larger than prokaryotes • to isolate specialized chemical processes in specific parts of the cell • to produce “packages” (vesicles) of chemical components that can be shuttled around the cell actively Membrane-enclosed organelles take up ~50% of the volume of eukaryotic cells: • nucleus – genomic function • endoplasmic reticulum – synthesis of lipids; on the border with the cytosol, synthesis of proteins destined for many organelles and the plasma membrane • Golgi apparatus – modification, sorting, and packaging of proteins and lipids for specific intracellular destination (akin to a mail sort facility) • lysosomes – degradation • endosomes – sorting of endocytosed (engulfed) material by the cell • peroxisomes – oxidation of toxic species • mitochondria , chloroplasts – energy conversion Cells contain ͥͤ ͥͦ protein molecules that are constantly being synthesized and 10 Ǝ 10 degraded Proteins are synthesized in the cytosol , but not all proteins remain there and many must be transported to the appropriate compartment For comparison: transport by diffusion Even without active transport requiring free energy transduction, movement of molecules in the cell is rapid by diffusive motion © M. S. Shell 2009 1/11 last modified 10/27/2010 Consider a sea of molecules. Pinpoint one molecule and note its starting position at time 0. Due to thermal motion, the particle on average makes a random jump of length every units ͠ of time. The jump is random in the radial direction. This is called a random walk . Repeat this process for many jumps n and interrogate the final distance of the particle from its starting point ͦ ͠ We could imagine doing many such experiments. -
Profile of Peter Novick
PROFILE PROFILE Profile of Peter Novick Sandeep Ravindran Science Writer There was a time in graduate school when a combination of yeast genetics and cell Peter Novick wasn’tsureifhisresearch biology, he has spent his career investigating wouldleadanywhere.Asagraduatestudent the tightly regulated mechanisms involved in in cell biologist Randy Schekman’s laboratory intracellular transport. For his contributions at the University of California at Berkeley, to our understanding of this fundamental Novick had been using a genetic approach physiological process, Novick was elected to to understand the yeast secretory pathway, the National Academy of Sciences in 2013. responsible for moving proteins out of the “In his own lab, first at Yale and now at cell. Now a professor at the University of UC San Diego, Peter launched a brilliant in- California, San Diego, Novick says it was only dependent career with the discovery that a when he identified a mutant in which vesicles protein called Sec4 encodes a small GTP- piledupinsidethecell,showingthatithad binding protein, the first of three dozen so- a defective secretory pathway, that he knew called Rab proteins that we now know con- he had made a breakthrough. “That con- trol the targeting of transport vesicles to all vinced me. Before then I wasn’tsureifI the many destinations in the cell,” says had a thesis project, afterwards it was pretty Schekman. “On the strength of this work clear I did,” he says. and much more in subsequent years, he It turned out that Novick had a lot more was elected to the National Academy of Sci- than a thesis project. -
Formation and Structure of Filamentous Systems for Insect Flight and Mitotic Movements Melvyn Dennis Goode Iowa State University
Iowa State University Capstones, Theses and Retrospective Theses and Dissertations Dissertations 1967 Formation and structure of filamentous systems for insect flight and mitotic movements Melvyn Dennis Goode Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/rtd Part of the Genetics Commons Recommended Citation Goode, Melvyn Dennis, "Formation and structure of filamentous systems for insect flight and mitotic movements " (1967). Retrospective Theses and Dissertations. 3391. https://lib.dr.iastate.edu/rtd/3391 This Dissertation is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Retrospective Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. FORMATION AND STRUCTURE OF FILAMENTOUS SYSTEMS FOR INSECT FLIGHT AND MITOTIC MOVEMENTS by Melvyn Dennis Goode A Dissertation Submitted to the Graduate Faculty in Partial Fulfillment of The Requirements for the Degree of DOCTOR OF PHILOSOPHY Major Subject: Cell Biology Approved: Signature was redacted for privacy. In Charge oi Major Work Signature was redacted for privacy. Chairman Advisory Committee Cell Biology Program Signature was redacted for privacy. Signature was redacted for privacy. Iowa State University Of Science and Technology Ames, Iowa: 1967 ii TABLE OF CONTENTS Page I. INTRODUCTION 1 PART ONE. THE MITOTIC APPARATUS OF A GIANT AMEBA 5 II. THE STRUCTURE AND PROPERTIES OF THE MITOTIC APPARATUS 6 A. Introduction .6 1. Early studies of mitosis 6 2. The mitotic spindle in living cells 7 3.