Chm 328 Mechanism of Organic Reactions Carbanions
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Study of Reactions of Two Mannich Bases Derived of 4’-Hydroxychalcones with Glutathione by RP‑TLC, RP‑HPLC and RP‑HPLC‑ESI‑MS Analysis
http://dx.doi.org/10.21577/0103-5053.20160260 J. Braz. Chem. Soc., Vol. 28, No. 6, 1048-1062, 2017. Printed in Brazil - ©2017 Sociedade Brasileira de Química 0103 - 5053 $6.00+0.00 Article Study of Reactions of Two Mannich Bases Derived of 4’-Hydroxychalcones with Glutathione by RP-TLC, RP-HPLC and RP-HPLC-ESI-MS Analysis Aline Bernardes,a,b Caridad N. Pérez,a Mátyás Mayer,c Cameron C. da Silva,a Felipe T. Martinsa and Pál Perjési*,b aInstituto de Química, Universidade Federal de Goiás, 74690-900 Goiânia-GO, Brazil bInstitute of Pharmaceutical Chemistry and cDepartment of Forensic Medicine, University of Pécs, H-7624 Pécs, Hungary 4’-Hydroxychalcones have been reported to possess several beneficial biological effects. Several lines of evidence accumulated to demonstrate increased biological activities of the Mannich base derivatives of the parent 4’-hydroxychalcones. Bioactivities of chalcones and related α,β-unsaturated ketones are frequently associated with their reactivity with cellular thiols, such as GSH. For comparison of GSH reactivity, two bis Mannich bases of two 4’-hydroxychalcones were synthesized and reacted with GSH under non-cellular conditions. Reversed-phase thin layer chromatography (RP-TLC) and reversed-phase high performance liquid chromatography (RP-HPLC) analysis showed formation of two polar products which structures were confirmed by RP-HPLC-ESI-MS (RP-HPLC-electrospray ionization mass spectrometry) as 1:1 chalcone-GSH adducts in each case. At pH values below 8.0, the two bis Mannich bases showed higher GSH reactivity than two 4’-hydroxychalcones. Influence of the nature of the amino groups, the ring-B substituents and pH of the medium on reactivity was also investigated. -
There Are Three Major Biological Molecules Classified As Ketone Bodies
There are three major biological molecules classified as ketone bodies: These ketone bodies are water soluble and do not need specific transporters to cross membranes. Synthesis of acetoacetate 1. React two acetyl-CoA molecules with each other using thiolase. This is called acetoacetyl-CoA. What is the second product? 2. React a third acetyl-CoA molecule with acetoacetyl-CoA. This step is catalyzed by hydroxymethylglutaryl-CoA synthase (HMG-CoA synthase). a. Deprotonate C2 of acetyl-CoA. You have created a great nucleophile. b. React your newly formed carbanion nucleophile with the electrophilic carbonyl C3 of acetoacetyl-CoA. c. Protonate the oxyanion. d. Use water as a nucleophile to react with the electrophilic carbonyl of the thioester of the newly added acetyl-CoA unit. This results in a carboxylate functional group. e. Your product should contain a 5-carbon chain, which starts with a thioester to CoA, ends with a carboxylate, and has a hydroxyl and a methyl group attached to C3. This is β-hydroxy-β- methylglutaryl-CoA (HMG-CoA). 3. An acetyl-CoA group is eliminated. This step is catalyzed by hydroxymethylglutaryl-CoA lyase (HMG- CoA lyase). a. A base deprotonates the hydroxyl group of β-hydroxy-β-methylglutaryl-CoA. b. A pair of electrons from the oxyanion moves to form a carbonyl. C2 leaves as a carbanion [which delocalizes into the adjacent thioester carbonyl]. c. The first product is acetoacetate. d. The carbanion picks up the proton and leaves as acetyl-CoA. Formation of acetone from acetoacetate This occurs in a non-enzymatic fashion because of the arrangement of the ketone in the β position from the carboxylate in acetoacetate and causes problems since acetone builds up. -
DEVELOPMENT of NOVEL METHODOLOGIES UTILIZING QUATERNARY AMMONIUM SALTS AS CATALYSTS by LINDSEY RAE CULLEN DISSERTATION Submitted
DEVELOPMENT OF NOVEL METHODOLOGIES UTILIZING QUATERNARY AMMONIUM SALTS AS CATALYSTS BY LINDSEY RAE CULLEN DISSERTATION Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Chemistry in the Graduate College of the University of Illinois at Urbana-Champaign, 2015 Urbana, Illinois Doctoral Committee: Professor Scott E. Denmark, Chair Professor Martin D. Burke Professor Scott K. Silverman Professor Steven C. Zimmerman ii Abstract The first half of this thesis (Chapter 2) described the development of a fluoride-promoted conjugate addition of sulfur-stabilized carbanion nucleophiles to α,β-unsaturated ketones and esters. This reaction was achieved using a substoichiometric amount of TBAF, resulting in high yields on the desired 1,4-addition product. The addition of 1,3-dithianes was given particular focus as a novel method for the preparation of differentially protect 1,4-dicarbonyl compounds. Observation by 13C NMR spectroscopy provided evidence that the reaction proceeds through an ion pair, and attempts to extend this reaction to asymmetric additions using a chiral counterion are presented in detail. The second half of this thesis (Chapter 3) details development of a phase transfer catalyzed [2,3]-sigmatropic rearrangement of allyloxy carbonyl compounds. Initial investigation focused on identifying viable substrate classes that would undergo selective [2,3]-rearrangement under phase transfer conditions. Under certain conditions, the [2,3]-sigmatropic rearrangement of allyloxy carbonyl compounds takes place in the presence of a phase transfer agent, providing a rare example of a phase transfer catalyzed unimolecular reaction. In the course of this investigation it was found that catalysis is dependent on several variables including base concentration, catalyst structure, and substrate lipophilicity. -
Generation of a Structurally Diverse Library Through Alkylation and Ring
70 Acta Chim. Slov. 2013, 60, 70–80 Scientific paper Generation of a Structurally Diverse Library through Alkylation and Ring Closure Reactions Using 3-Dimethylamino-1-(thiophen-2-yl)propan-1-one Hydrochloride* Gheorghe Roman Petru Poni Institute of Macromolecular Chemistry, 41A Aleea Gr. Ghica Vodâ, Ias¸i 700487, Romania Corresponding author: E-mail: [email protected] Received: 01-06-2012 Abstract 3-Dimethylamino-1-(thiophen-2-yl)propan-1-one hydrochloride (2), a ketonic Mannich base derived from 2-acetyl- thiophene, was used as a starting material in different types of alkylation and ring closure reactions with a view to gene- rate a structurally diverse library of compounds. Compound 2 reacts with S-alkylated dithiocarbamic acid salts and aryl mercaptans to produce dithiocarbamates and thioethers, respectively. The dimethylamino moiety in compound 2 was exchanged with various aliphatic secondary and aromatic primary and secondary amines, whereas monocyclic NH-azoles such as pyrazole, imidazole, 1,2,4-triazole, and tetrazole were N-alkylated by compound 2. Ketones, pyrrole and in- doles have been the substrates subjected to C-alkylation reactions by compound 2. Ring closure reactions of compound 2 with a suitable bifunctional nucleophile yielded pyrazolines, pyridines, 2,3-dihydro-1,5-1H-benzodiazepines, 2,3- dihydro-1,5-1H-benzothiazepine, pyrimido[1,2-a]benzimidazole and 4-hydroxypiperidine derivatives. Keywords: Ketonic Mannich base, alkylation, amine exchange, cyclization. 1. Introduction through the replacement of the easily leaving dimethyla- mino group by various nucleophiles. Also, several cycliza- The chemistry of Mannich bases has drawn a great tions of the aforementioned Mannich base with bifunctio- deal of attention owing to the high synthetic potential and nal nucleophiles to 5-, 6- and 7-membered nitrogen-con- the outstanding applications of this class of compounds.2–4 taining heterocycles have been investigated. -
Reactions of Aromatic Compounds Just Like an Alkene, Benzene Has Clouds of Electrons Above and Below Its Sigma Bond Framework
Reactions of Aromatic Compounds Just like an alkene, benzene has clouds of electrons above and below its sigma bond framework. Although the electrons are in a stable aromatic system, they are still available for reaction with strong electrophiles. This generates a carbocation which is resonance stabilized (but not aromatic). This cation is called a sigma complex because the electrophile is joined to the benzene ring through a new sigma bond. The sigma complex (also called an arenium ion) is not aromatic since it contains an sp3 carbon (which disrupts the required loop of p orbitals). Ch17 Reactions of Aromatic Compounds (landscape).docx Page1 The loss of aromaticity required to form the sigma complex explains the highly endothermic nature of the first step. (That is why we require strong electrophiles for reaction). The sigma complex wishes to regain its aromaticity, and it may do so by either a reversal of the first step (i.e. regenerate the starting material) or by loss of the proton on the sp3 carbon (leading to a substitution product). When a reaction proceeds this way, it is electrophilic aromatic substitution. There are a wide variety of electrophiles that can be introduced into a benzene ring in this way, and so electrophilic aromatic substitution is a very important method for the synthesis of substituted aromatic compounds. Ch17 Reactions of Aromatic Compounds (landscape).docx Page2 Bromination of Benzene Bromination follows the same general mechanism for the electrophilic aromatic substitution (EAS). Bromine itself is not electrophilic enough to react with benzene. But the addition of a strong Lewis acid (electron pair acceptor), such as FeBr3, catalyses the reaction, and leads to the substitution product. -
Novel Carbanion-Type Reagents for Organic Synthesis Richard A
Novel Carbanion-Type Reagents for Organic Synthesis Richard A. Kjonaas, Department of Chemistry and Physics, Indiana State University The chemo-, regio-, and stereoselective formation of carbon-carbon bonds is perhaps the most challenging aspect of synthetic organic chemistry. Since the early 1980’s I’ve had the privilege of working with a very talented group of graduate and undergraduate students in an effort to make some meaningful progress towards that extremely elusive goal. This talk will focus mainly on two aspects of our work—carboxylate-stabilized enolates and triorganozincate reagents. Carboxylate-stabilized enolates. Our studies aimed at an easily-to-remove enolate stabilizing group led to a new compound, dilithioacetoacetate. The use of this carboxylate- stabilized acetone enolate to convert an alkyl halide to a methyl ketone (eq 1) offers a huge advantage over the classical acetoacetic acid ketone synthesis—it eliminates the need to carry the alkyl moiety through a saponification reaction prior to decarboxylation, thus leading to higher yields and opening up the possibility of having a base-sensitive functional group on R.1 Triorganozincate reagents. It had been reported by Isobe et. al.2 that trialkyl zincate reagents transfer an alkyl group efficiently in a 1,4-fashion to α,β-unsaturated ketones much like the more well-known lithium dialkyl curprate reagents. These zincates offered a distinct advantage over cuprates in that they could be made and used at 0° rather than -78°. However, they also carried a huge disadvantage—only one out of three R groups was transferred and the other two were protonated (destroyed) in the workup. -
Mannich Reaction
1. Introduction 1.1- Mannich Reaction The Mannich reaction is three component condensation in which a compound containing an active hydrogen atom is allowed to react with formaldehyde and an NH-amine derivative . Secondary amines rather than primary amines and ammonia are employed , the resulting product (Mannich Base ) is an amine compound having the N atom linked to the R substrate through a methylene group 1,2. The aminoalkylation of CH-acidic compounds was described by several authors as early as the 19th. century. However, it was Carl Mannich who was the first to recognize the enormous significance of this reaction , and it was he who extended the chemistry into a broad based synthetic methodology through systematic research. Since then this reaction that now carries his name has developed into one of the most important C-C bond-forming reactions in organic chemistry3,4. The Mannich reaction is a classical method for the preparation of β -aminoketones and aldehydes (Mannich bases) and, as such, is one of the most important basic reaction types in organic chemistry. It is the key step in the synthesis of numerous pharmaceuticals and natural products3,4. 1 The Mannich reaction can be presented by the following equation: The essential feature of the reaction is the replacement of the active hydrogen atom by an aminomethyl or substituted aminomethyl group. The symbolizes the active hydrogen component which includes ketones, aldehydes, acids, esters, phenols, acetylenes, picolines, nitroalkanes and quinolines1,2. 1.2- Mechanism of the Mannich reaction The mechanism of the Mannich reaction has been well investigated, the condensation reaction occurs in two steps: first, the amine reacts with formaldehyde to give condensation product (5 ), (6), ( 7) (step I) which then attacks the substrate R-H (step II) .The reaction does not normally follow the other possible route (step III and IV) ; however, some successful reaction between hydroxymethyl derivatives (8) and alkylamines to give Mannich bases (9) should be mentioned . -
Synthesis and Characterization of Some Novel Mannich Base Compounds
Synthesis and Characterization of Some Novel Mannich Base Compounds Dr. P. Sounthari Dr. P. R. Sivakumar Dr. P. Sounthari Dr. P.R. Sivakumar Assistant Professor, PG & Research Department of Department of Chemistry, Chemistry, PSG College of Arts and Government Arts Science, Coimbatore- College (Autonomous), 641 014. Coimbatore - 641 018, Tamil Nadu, India. ISBN 978-93-89631-02-9 ISBN 978-93-89631-04-3 (eBook) https://doi.org/10.34256/ioriip196 © IOR INTERNATIONAL PRESS. This book is an open access publication. Open Access This book is licensed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license and indicate if changes were made. The images or other third party material in this book are included in the book’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the book’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. -
A Carbanion Is an Anion in Which Carbon Has an Unshared Pair Of
A carbanion is an anion in which carbon has an unshared pair of electrons and bears a negative charge usually with three substituents for a total of eight valence electrons.[1] The carbanion exists in a trigonal pyramidal geometry. Formally a carbanion is the conjugate base of a carbon acid. − − R3C-H + B → R3C + H-B where B stands for the base. A carbanion is one of several reactive intermediates in organic chemistry. Definitions A carbocation was previously often called a carbonium ion but questions arose on the exact meaning.[1] In present day chemistry a carbocation is any positively charged carbon atom. Two special types have been suggested: carbenium ions (protonated carbenes, hence the name) are trivalent and carbonium ions (protonated alkanes) are pentavalent or hexavalent. University level textbooks only discuss carbocations as if they are carbenium ions,[2] or discuss carbocations with a fleeting reference to the older phrase of carbonium ion[3] or carbenium and carbonium ions.[4] One textbook to this day clings on to the older name of carbonium ion for carbenium ion and reserves the phrase hypervalent carbenium + [5] ion for CH5 . Carbonium ion of methane Radical (chemistry) From Wikipedia, the free encyclopedia Jump to: navigation, search "Free radical" redirects here. For other uses, see Free radical (disambiguation). Moses Gomberg (1866-1947), the founder of radical chemistry Radicals (often referred to as free radicals) are atoms, molecules, or ions with unpaired electrons or an open shell configuration. Free radicals may have positive, negative, or zero charge. With some exceptions, these unpaired electrons cause radicals to be highly chemically reactive. -
Bsc Chemistry
Subject Chemistry Paper No and Title Paper 1: ORGANIC CHEMISTRY- I (Nature of Bonding and Stereochemistry) Module No and Title Module 4: Applications of Electronic Effects Module Tag CHE_P1_M4 CHEMISTRY PAPER 1: ORGANIC CHEMISTRY- I (Nature of Bonding and Stereochemistry) MODULE 4: Applications of Electronic Effects TABLE OF CONTENT 1. Learning outcomes 2. Introduction 3. Effect on Stability of carbon intermediates 3.1 Stability of carbocations 3.2 Stability of carbanions 3.3 Stability of carbon free radicals 4. Effect on Acidity 5. Effect on Basicity 5.1 Basicity of Aliphatic Amines 5.2 Basicity of aromatic Amines 5.3. Basicity of amides 6. Effect on electrophilic substitution in substituted benzenes 7. Summary CHEMISTRY PAPER 1: ORGANIC CHEMISTRY- I (Nature of Bonding and Stereochemistry) MODULE 4: Applications of Electronic Effects 1. Learning Outcomes After studying this module you shall be able to: Apply electronic effects to compare stability of carbon intermediates 2. Introduction Of the three permanent effects, in most cases, the dominant one is mesomeric effect, followed by hyperconjugative and then inductive effect. One important exception is that in case of halogens attached to conjugated systems like benzene, -I is more dominant than +M. These electronic effects have a very vast application and impact on the various properties of the organic molecules/species. Let us try to understand effects of these electronic effects on the stability of carbon intermediates, effect on acidity and basicity. 3. Effect on Stability of carbon intermediates In order to understand the stability of any charged species, keep in mind that more is the delocalization of the charge, greater is the stability. -
Elimination Reactions
Elimination Reactions Elimination reactions discussed here are reactions that produce alkenes, usually from the loss of two particles, x-y, from a substrate. The nucleophilic substitution reactions discussed in another section are often accompanied by elimination reactions as competing reactions. Conditions can be met that make the elimination reaction the main reaction. Fluorine can be eliminated as fluoride but it is the least reactive of the halogens because of its strong C-F bond. Thus for halogens the rate of elimination is I>Br>Cl>F. Fluorine, because of its great electronegativity, can cause the beta hydrogen to become acidic. The mechanism of elimination form many fluorinated compounds involves a carbanion in the E1cb (Elimination first order carbanion) mechanism. Stereoselectiviy of elimination is not always observed. Elimination first order (E1) Secondary substrates give products from both substitution and elimination, by first rate limiting ionization of the substrate to produce a carbocation. The carbocation then can react with a nucleophile (SN1) or lose a beta hydrogen (E1) to form an alkene. Of course, carbocations can do other things such as rearrange to a more stable carbocation followed by substitution and elimination. The E1 mechanism is unlikely for fluorinated compounds because of the requirement to break the strong carbon-fluorine bond in the rate determining step. CH3 H Ph OCH3 Racemic mixture SN1 CH3 CH3OH H H CH3 Ph I Ph E1 R enantiomer a carbocation H CH2 Ph The elimination reactions requires removal of a beta hydrogen by a base. Thus increasing the base strength of the reaction medium increases the amount of elimination product. -
Synthesis of Triacetic Acid Lactone Mannich Bases and Their Inhibition of Corrosion John Rey Apostol Romal Iowa State University
Iowa State University Capstones, Theses and Graduate Theses and Dissertations Dissertations 2016 Synthesis of triacetic acid lactone Mannich bases and their inhibition of corrosion John Rey Apostol Romal Iowa State University Follow this and additional works at: https://lib.dr.iastate.edu/etd Part of the Chemistry Commons Recommended Citation Romal, John Rey Apostol, "Synthesis of triacetic acid lactone Mannich bases and their inhibition of corrosion" (2016). Graduate Theses and Dissertations. 15802. https://lib.dr.iastate.edu/etd/15802 This Thesis is brought to you for free and open access by the Iowa State University Capstones, Theses and Dissertations at Iowa State University Digital Repository. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Iowa State University Digital Repository. For more information, please contact [email protected]. Synthesis of triacetic acid lactone Mannich bases and their inhibition of corrosion by John Rey Apostol Romal A thesis submitted to the graduate faculty in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE Major: Organic Chemistry Program of Study Committee: George A. Kraus, Major Professor Brent Shanks Arthur Winter Iowa State University Ames, Iowa 2016 Copyright © John Rey Apostol Romal, 2016. All rights reserved. ii DEDICATION To my family and friends. iii TABLE OF CONTENTS DEDICATION ........................................................................................................... ii LIST OF ABBREVIATIONS