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Phylogenetic Relationships Among Octopodidae Species in Coastal Waters of China Inferred from Two Mitochondrial DNA Gene Sequences Z.M
Phylogenetic relationships among Octopodidae species in coastal waters of China inferred from two mitochondrial DNA gene sequences Z.M. Lü, W.T. Cui, L.Q. Liu, H.M. Li and C.W. Wu Zhejiang Provincial Key Laboratory of Marine Germplasm Resources Exploration and Utilization, College of Marine Sciences, Zhejiang Ocean University, Zhoushan, China Corresponding author: Z.M. Lü E-mail: [email protected] Genet. Mol. Res. 12 (3): 3755-3765 (2013) Received January 21, 2013 Accepted August 20, 2013 Published September 19, 2013 DOI http://dx.doi.org/10.4238/2013.September.19.7 ABSTRACT. Octopus in the family Octopodidae (Mollusca: Cephalopoda) has been generally recognized as a “catch-all” genus. The monophyly of octopus species in China’s coastal waters has not yet been studied. In this paper, we inferred the phylogeny of 11 octopus species (family Octopodidae) in China’s coastal waters using nucleotide sequences of two mitochondrial DNA genes: cytochrome c oxidase subunit I (COI) and 16S rRNA. Sequence analysis of both genes revealed that the 11 species of Octopodidae fell into four distinct groups, which were genetically distant from one another and exhibited identical phylogenetic resolution. The phylogenies indicated strongly that the genus Octopus in China’s coastal waters is also not monophyletic, and it is therefore clear that the Octopodidae systematics in this area requires major revision. It is demonstrated that partial sequence information of both the mitochondrial genes 16S rRNA and COI could be used as diagnostic molecular markers in the identification and resolution of the taxonomic ambiguity of Octopodidae species. Key words: Molecular phylogeny; Mitochondrial DNA gene sequences; Octopodidae species; COI; 16S rRNA Genetics and Molecular Research 12 (3): 3755-3765 (2013) ©FUNPEC-RP www.funpecrp.com.br Z.M. -
The Occurrence of Cistopus Taiwanicus in Sri Lankan Waters
Proceedings of the National Aquatic Resources Research and Development Agency (NARA), Scientific Sessions 2016 The occurrence of Cistopus taiwanicus in Sri Lankan waters D.R. Herath*, D.N.A. Ranmadugala and A.A.D.G.U. Amarakoon Marine Biological Resources Division, National Aquatic Resources Research and Development Agency (NARA), Crow Island, Colombo 15, Sri Lanka Abstract Cephalopods include a diverse collection of more than 650 species of octopus, cuttlefish, squid and nautilus. Several of these species are commercially important in Sri Lanka. As morphological identification is sometimes difficult, molecular techniques were used to confirm the species of cuttlefish, squid and octopus species found in Sri Lankan waters. Cephalopod samples were collected from Chilaw, Negombo, Beruwela and Kalpitiya. The miotochondrial COI region was amplified and sequenced. The sequences were matched with universal databases to identify each species. The cuttlefish species Sepia aculeata, Sepiella inermis, Sepia pharaonis and Sepioteuthis lessoniana, the squid species,' Loligo singhalensis and Loligo (Uroteuthis) duvacelli were identified by this barcoding technique. Two species of octopus,Cistopus taiwanicusaad Octopus vulgaris were also identified. A significant finding in this study was that two separate octopus specimens collected from Negombo and Kalpitiya were identified as Cistopus taiwanicus. Four species of Cistopus, namely, C indicus, C. chinensis, C. taiwanicus and C. platinoidus have been recorded in the world. Out of these four species, only C. indicus has been reported from Sri Lanka. Therefore, the species list for Cephalopod species precent in Sri Lanka could be updated to include the species Cistopus taiwanicus. Further research is needed to confirm whether C. indicus and C. -
An Illustrated Key to the Families of the Order
CLYDE F. E. ROP An Illustrated RICHARD E. YOl and GILBERT L. VC Key to the Families of the Order Teuthoidea Cephalopoda) SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • 1969 NUMBER 13 SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY NUMBER 13 Clyde F. E. Roper, An Illustrated Key 5K?Z" to the Families of the Order Teuthoidea (Cephalopoda) SMITHSONIAN INSTITUTION PRESS CITY OF WASHINGTON 1969 SERIAL PUBLICATIONS OF THE SMITHSONIAN INSTITUTION The emphasis upon publications as a means of diffusing knowledge was expressed by the first Secretary of the Smithsonian Institution. In his formal plan for the Institution, Joseph Henry articulated a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge not strictly professional." This keynote of basic research has been adhered to over the years in the issuance of thousands of titles in serial publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Annals of Flight Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Studies in History and Technology In these series, the Institution publishes original articles and monographs dealing with the research and collections of its several museums and offices and of professional colleagues at other institutions of learning. These papers report newly acquired facts, synoptic interpretations of data, or original theory in specialized fields. -
Along the Saudi Arabian Red Sea Coastline Thesis by Gordon Byron
Phylogenetic Diversity of Cephalopoda (Animalia:Mollusca) Along the Saudi Arabian Red Sea Coastline Thesis by Gordon Byron In Partial Fulfillment of the Requirements For the Degree of Master of Science King Abdullah University of Science and Technology Thuwal, Kingdom of Saudi Arabia © December, 2016 Gordon Byron All rights reserved 2 EXAMINATION COMMITTEE PAGE The thesis of Gordon Byron is approved by the examination committee. Committee Chairperson: Michael Berumen Committee Co-Chair: Christian Voolstra Committee Member: Timothy Ravasi 3 ABSTRACT Phylogenetic Diversity of Cephalopoda (Animalia:Mollusca) Along the Saudi Red Sea Coastline Gordon Byron Although the Red Sea presents a unique environment with high temperature and salinity, it remains an area that is understudied. This lack of information is reflected in many areas, one which is biodiversity. Despite increasing work on biodiversity throughout the Red Sea and an increase in Cephalopoda studies, Cephalopoda in the Red Sea remain underrepresented, which is especially pronounced in molecular analyses. Members of the class Cephalopoda are considered to be major contributors to coral reef ecosystems, serving as part of the food chain and exhibiting population increases due to targeted teleost fisheries and global climate change. In order to assess the biodiversity of Cephalopoda in the Saudi Arabian Red Sea, 87 specimens were collected from 25 reef locations between 17°N and 28°N latitude, as well as from the largest fish market in the Kingdom of Saudi Arabia. Taxonomic identification of specimens was determined using morphological comparisons with previously reported species in the Red Sea and the molecular barcoding region Cytochrome Oxidase I. 84 Red Sea sequences were compared with sequences from GenBank and analyzed using a complement of Neighbor- Joining, Maximum-Likelihood, and Bayesian inference trees. -
C M F R I Annual R Eport 2012-13
ISSN 0972-2378 CMFRI Annual Report 2012-13 Regional Centre - MANDAPAM Research Centre - MUMBAI Research Centre - CALICUT Marine Fisheries PO 2nd Floor, CIFE (Old campus) West Hill PO, Calicut 673005 Mandapam Camp 623520 Fisheries University Road, Tel: 0495-2382033, 2382011, 0495-2382011 Tel: 04573 241433, 241456 Versova, Mumbai - 400 061, Maharashtra Email : [email protected] Fax: 04573 241502 Tel : 022 - 26392975/26393029 E-mail : [email protected] E-mail: [email protected] Fax : 022-26320824 Research Centre - VIZHINJAM Email: [email protected] P.B. No. 9, Vizhinjam PO, Thiruvananthapuram 695521, Kerala Regional Centre - Visakhapatnam Research Centre - KARWAR Tel: 0471-2480224, Fax: 0471-2480324 PB No.5, Karwar581301 E-mail : [email protected] Pandurangapuram, Ocean View Layout, North Kanara, Karnataka Visakhapatnam 530003, Andhra Pradesh Research Centre - TUTICORIN Tel : 08382-222639 South Beach Road (Near Roche Park) Tel : 0891 2543797, 2543793 Fax:08382-221371 Tuticorin 628001, Tamil Nadu Fax:0891-2500385 E-mail : [email protected] Tel: 0461-2320274, 2320102 E-mail: [email protected] Fax: 0461-2322274 Research Centre - MANGALORE E-mail : [email protected] Technology Wing Campus of Research Centre - CHENNAI College of Fisheries, Regional Centre - VERAVAL 75, Santhome High Road, P.B.No. 244, Hoige Bazar Raja Annamalaipuram, Matsya Bhavan, Bhidia Mangalore-575 001, Chennai 600028, Tamil Nadu Veraval 362269, Gujarat Dakshina Kannada, Karnataka Tel: 044-24617264/24617317 Tel : 02876-232649, Fax : 02876-231865 Tel: 0824 2424152, Fax : 0824 2424061 Fax: 044-24617290 Email : [email protected] E-mail : [email protected] E-mail : [email protected] Annual Report 2012-13 Central Marine Fisheries Research Institute (Indian Council of Agricultural Research) Post Box No. -
Western Central Pacific
FAOSPECIESIDENTIFICATIONGUIDEFOR FISHERYPURPOSES ISSN1020-6868 THELIVINGMARINERESOURCES OF THE WESTERNCENTRAL PACIFIC Volume2.Cephalopods,crustaceans,holothuriansandsharks FAO SPECIES IDENTIFICATION GUIDE FOR FISHERY PURPOSES THE LIVING MARINE RESOURCES OF THE WESTERN CENTRAL PACIFIC VOLUME 2 Cephalopods, crustaceans, holothurians and sharks edited by Kent E. Carpenter Department of Biological Sciences Old Dominion University Norfolk, Virginia, USA and Volker H. Niem Marine Resources Service Species Identification and Data Programme FAO Fisheries Department with the support of the South Pacific Forum Fisheries Agency (FFA) and the Norwegian Agency for International Development (NORAD) FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 1998 ii The designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers and boundaries. M-40 ISBN 92-5-104051-6 All rights reserved. No part of this publication may be reproduced by any means without the prior written permission of the copyright owner. Applications for such permissions, with a statement of the purpose and extent of the reproduction, should be addressed to the Director, Publications Division, Food and Agriculture Organization of the United Nations, via delle Terme di Caracalla, 00100 Rome, Italy. © FAO 1998 iii Carpenter, K.E.; Niem, V.H. (eds) FAO species identification guide for fishery purposes. The living marine resources of the Western Central Pacific. Volume 2. Cephalopods, crustaceans, holothuri- ans and sharks. Rome, FAO. 1998. 687-1396 p. -
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources
Southeastern Regional Taxonomic Center South Carolina Department of Natural Resources http://www.dnr.sc.gov/marine/sertc/ Southeastern Regional Taxonomic Center Invertebrate Literature Library (updated 9 May 2012, 4056 entries) (1958-1959). Proceedings of the salt marsh conference held at the Marine Institute of the University of Georgia, Apollo Island, Georgia March 25-28, 1958. Salt Marsh Conference, The Marine Institute, University of Georgia, Sapelo Island, Georgia, Marine Institute of the University of Georgia. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Caprellidea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1975). Phylum Arthropoda: Crustacea, Amphipoda: Gammaridea. Light's Manual: Intertidal Invertebrates of the Central California Coast. R. I. Smith and J. T. Carlton, University of California Press. (1981). Stomatopods. FAO species identification sheets for fishery purposes. Eastern Central Atlantic; fishing areas 34,47 (in part).Canada Funds-in Trust. Ottawa, Department of Fisheries and Oceans Canada, by arrangement with the Food and Agriculture Organization of the United Nations, vols. 1-7. W. Fischer, G. Bianchi and W. B. Scott. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume II. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. Volume III. Final report to the Minerals Management Service. J. M. Uebelacker and P. G. Johnson. Mobile, AL, Barry A. Vittor & Associates, Inc. (1984). Taxonomic guide to the polychaetes of the northern Gulf of Mexico. -
Northeast Fisheries Science Center Publications, Reports, and Abstracts for Calendar Year 2001
Northeast Fisheries Science Center Reference Document 02-10 Northeast Fisheries Science Center Publications, Reports, and Abstracts for Calendar Year 2001 by Laura Garner and Jon A. Gibson August 2002 Recent Issues in This Series 01-13 Elemental Composition of Fish Otoliths: Results of a Laboratory Intercomparison Exercise. By V.S. Zdanowicz. September 2001. 01-14 Identification of Seasonal Area Management Zones for North Atlantic Right Whale Conservation. By R.L. Merrick, P.J. Clapham, T.V.N. Cole, P. Gerrior, and R.M. Pace, III. October 2001. 01-15 Bycatch Estimates of Coastal Bottlenose Dolphin (Tursiops truncatus) in U.S. Mid-Atlantic Gillnet Fisheries for 1996 to 2000. By D.L. Palka and M.C. Rossman. November 2001. 01-16 Causes of Reproductive Failure in North Atlantic Right Whales: New Avenues for Research -- Report of a Workshop Held 26-28 April 2000, Falmouth, Massachusetts. By R.R. Reeves, R. Roland, and P.J. Clapham, editors. November 2001. 01-17 Collected Abstracts of the Northeast Fisheries Science Center’s Seventh Science Symposium, Westbrook, Con- necticut, December 11-13, 2001. By R. Mercaldo-Allen, J. Choromanski, M.S. Dixon, J.B. Hughes, D.R. Lanyon, C.A. Kuropat, C. Martin, and J.J. Ziskowski, compilers. December 2001. 01-18 Report of the 33rd Northeast Regional Stock Assessment Workshop (33rd SAW): Stock Assessment Review Committee (SARC) Consensus Summary of Assessments. [By Northeast Regional Stock Assessment Workshop No. 33.] December 2001. 01-19 Report of the 33rd Northeast Regional Stock Assessment Workshop (33rd SAW): Public Review Workshop. [By Northeast Regional Stock Assessment Workshop No. -
A Lower Limit to Adult Size in Coleoid Cephalopods: Elements of a Discussion
Coleoid cephalopods through time (Warnke K., Keupp H., Boletzky S. v., eds) Berliner Paläobiol. Abh. 03 019-028 Berlin 2003 A LOWER LIMIT TO ADULT SIZE IN COLEOID CEPHALOPODS: ELEMENTS OF A DISCUSSION S. v. Boletzky CNRS, Observatoire Océanologique, Laboratoire Arago, F-66651 Banyuls-sur-Mer, [email protected] ABSTRACT The smallest living cephalopods are coleoids weighing less than 1 gram when adult (the pygmy squid Idiosepius spp., several pygmy species of the genus Octopus), and there are slightly larger species among sepiolid (Sepiola spp.) and loliginid (Pickfordiateuthis spp.) squid, sepiid cuttlefish (e. g. Sepia pulchra); moreover there are dwarf males in three pelagic octopod genera (Argonauta, Tremoctopus, Ocythoë). A common biological feature of these small species are short life-spans, the minimum being 3 months in Idiosepius. Small adult size of a female, along with a short life-span, limits individual fecundity. The adaptive responses to this limitation vary widely among species or groups. The most striking difference appears in the respective egg sizes. In pygmy squid, an individual ovum measures less than 1 mm in diameter, whereas in pygmy octopus, ovum sizes vary between 5 and 12 mm depending on the species. In both cases, maturation and release of eggs covers several weeks. If Idiosepius demonstrates that very small eggs giving rise to very small hatchlings permit rapid attainment of small adult size, within a very short life-span, the high fecundity of Idiosepius suggests massive juvenile mortality, probably relating to the planktonic post-hatching phase. A suggestive difference in fecundity appears within the octopodids: Octopus fitchi has a planktonic post-hatching phase and has a higher fecundity than pygmy species devoid of a planktonic phase. -
Dear Authors. Please See Below for Specific Edits Allowed on This Document (So That We Can Keep Track of Changes / Updates): 1
_______________________________________________________ Dear authors. Please see below for specific edits allowed on this document (so that we can keep track of changes / updates): 1. Affiliations (Suggesting mode) 2. Comments only on sections 1-6, 8-14 (unless it is your groups’ section, in which case edits using Suggesting mode allowed) 3. Edits and contributions can be made by anyone, using Suggesting mode, to sections 7, 15-18. NB! Suggesting mode- see fig below: pencil icon at top right of toolbar must be selected as Suggesting (not Editing). ___________________________________________________________ WORLD OCTOPUS FISHERIES Warwick H. Sauer[1], Zöe Doubleday[2], Nicola Downey-Breedt[3], Graham Gillespie[4], Ian G. Comentario [1]: Note: Authors Gleadall[5], Manuel Haimovici[6], Christian M. Ibáñez[7], Stephen Leporati[8], Marek Lipinski[9], Unai currently set up as: W. Sauer Markaida[10], Jorge E. Ramos[11], Rui Rosa[12], Roger Villanueva[13], Juan Arguelles[14], Felipe A. (major lead), followed by section leads in alphabetical order, Briceño[15], Sergio A. Carrasco[16], Leo J. Che[17], Chih-Shin Chen[18], Rosario Cisneros[19], Elizabeth followed by section contributors in Conners[20], Augusto C. Crespi-Abril[21], Evgenyi N. Drobyazin[22], Timothy Emery[23], Fernando A. alphabetical order. Fernández-Álvarez[24], Hidetaka Furuya[25], Leo W. González[26], Charlie Gough[27], Oleg N. Katugin[28], P. Krishnan[29], Vladimir V. Kulik[30], Biju Kumar[31], Chung-Cheng Lu[32], Kolliyil S. Mohamed[33], Jaruwat Nabhitabhata[34], Kyosei Noro[35], Jinda Petchkamnerd[36], Delta Putra[37], Steve Rocliffe[38], K.K. Sajikumar[39], Geetha Hideo Sakaguchi[40], Deepak Samuel[41], Geetha Sasikumar[42], Toshifumi Wada[43], Zheng Xiaodong[44], Anyanee Yamrungrueng[45]. -
Recent Cephalopoda Primary Types
Ver. 2 March 2017 RECENT CEPHALOPOD PRIMARY TYPE SPECIMENS: A SEARCHING TOOL Compiled by Michael J. Sweeney Introduction. This document was first initiated for my personal use as a means to easily find data associated with the ever growing number of Recent cephalopod primary types. (Secondary types (paratypes, etc) are not included due to the large number of specimens involved.) With the excellent resources of the National Museum of Natural History, Smithsonian Institution and the help of many colleagues, it grew in size and became a resource to share with others. Along the way, several papers were published that addressed some of the problems that were impeding research in cephalopod taxonomy. A common theme in each paper was the need to locate and examine types when publishing taxonomic descriptions; see Voss (1977:575), Okutani (2005:46), Norman and Hochberg (2005b:147). These publications gave me the impetus to revive the project and make it readily available. I would like to thank the many individuals who assisted me with their time and knowledge, especially Clyde Roper, Mike Vecchione, Eric Hochberg and Mandy Reid. Purpose. This document should be used as an aid for finding the location of types, type names, data, and their publication citation. It is not to be used as an authority in itself or to be cited as such. The lists below will change over time as more research is published and ambiguous names are resolved. It is only a search aid and data from this document should be independently verified prior to publication. My hope is that this document will make research easier and faster for the user. -
Environmental Determinants of Latitudinal Size-Trends in Cephalopods
Vol. 464: 153–165, 2012 MARINE ECOLOGY PROGRESS SERIES Published September 19 doi: 10.3354/meps09822 Mar Ecol Prog Ser Environmental determinants of latitudinal size-trends in cephalopods Rui Rosa1,*, Liliana Gonzalez2, Heidi M. Dierssen3, Brad A. Seibel4 1Laboratório Marítimo da Guia, Centro de Oceanografia, Faculdade de Ciências da Universidade de Lisboa, Av. Nossa Senhora do Cabo, 939, 2750-374 Cascais, Portugal 2Department of Computer Science and Statistics, University of Rhode Island, 9 Greenhouse Road, Kingston, Rhode Island 02881, USA 3Department of Marine Sciences, University of Connecticut, 1080 Shennecossett Road, Groton, Connecticut 06340-6048, USA 4Department of Biological Sciences, University of Rhode Island, 100 Flagg Road, Kingston, Rhode Island 02881, USA ABSTRACT: Understanding patterns of body size variation is a fundamental goal in ecology, but although well studied in the terrestrial biota, little is known about broad-scale latitudinal trends of body size in marine fauna and much less about the factors that drive them. We conducted a com- prehensive survey of interspecific body size patterns in coastal cephalopod mollusks, covering both hemispheres in the western and eastern Atlantic. We investigated the relationship between body size and thermal energy, resource and habitat availability and depth ranges. Both latitude and depth range had a significant effect on maximum body size in each of the major cephalopod groups (cuttlefishes, squids and octopuses). We observed significant negative associations between sea surface temperature (SST) and body size. No consistent relationships between body size and either net primary productivity (NPP), habitat extent (shelf area) or environmental varia- tion (range of SST and NPP) were found.