Helicobacter Pylori Adhesion and Patho-Adaptation the Role of Baba and Saba Adhesins in Persistent Infection and Chronic Inflammation

Total Page:16

File Type:pdf, Size:1020Kb

Helicobacter Pylori Adhesion and Patho-Adaptation the Role of Baba and Saba Adhesins in Persistent Infection and Chronic Inflammation UMEÅ UNIVERSITY MEDICAL DISSERTATIONS Abstract No. 83, ISSN 0345-7532, ISBN 91-7305-548-4 From the Department of Odontology, Division of Oral Microbiology, Faculty of Medicine, Umeå University, Umeå, Sweden Helicobacter pylori Adhesion and Patho-adaptation The role of BabA and SabA adhesins in persistent infection and chronic inflammation by Jafar Mahdavi Umeå, 2004 Print & Media To my lovely family; Vina, Melissa and Mona Print & Media Vision without action is a daydream, Action without vision is a nightmare. Derived from The Analects of Confucius Print & Media Contents Page Preface 5 Abbreviations 6 Abstract 8 Introduction 9 1. A brief history of H. pylori infection 9 2. Microbiology of Helicobacter 9 3. Epidemiology 10 4. The Lewis and ABO blood group systems and H. pylori infection 11 5. Biodiversity 13 5.1 Habitat diversity 13 5.2 Genetic diversity 13 5.3 Tropism and patho-adaptation 16 5.4 Biofilm formation 17 6. Virulence factors and persistence of infection 17 6.1 Adhesins 19 6.1.1 Consequences of bacterial adhesion 19 6.1.1.1 Effect on the bacterial cells 20 6.1.1.2 Effect on the host cells 21 6.2 Invasion of host cells 22 6.3 H. pylori enzymes 23 6.4 VacA and CagA 23 6.5 H. pylori LPS 24 3 Print & Media 7. Diseases associated with H. pylori infection 25 7.1 Gastritis 25 7.2 Peptic ulcer disease 27 7.3 Gastric adenocarcinoma 27 7.4 Barrett’s esophagus 28 Aims 29 Results and Discussion 30 8. The role of MUC5AC in H. pylori adherence 30 9. Gastric mucosa sialylation and inflammation 30 10. Identification of inflammation associated H. pylori adhesive activities 32 11. The role of BabA and SabA in persistent infection and 32 chronic inflammation 11.1 phase variation and biofilm formation 33 11.2 SabA and BabA in relation to patho-adaptation 34 12. The role of LPS in H. pylori adherence 35 Specific conclusions 37 Future perspectives 38 Acknowledgements 40 References 41 Appendix I-IV 53 4 Print & Media Preface This thesis is based on the following papers, which are referred to in the text by their Roman numerals: I. Van de Bovenkamp J.H., Mahdavi J., Korteland-Van Male A., Büller H., Einerhand A., Borén T., and Dekker J. The MUC5AC glycoprotein is the primary receptor for Helicobacter pylori in the human stomach. Helicobacter 2003, 8, 521-532. II. Mahdavi J., Sondén B., Hurtig M., Olfat O.F., Forsberg L., Roche N., Ångström J., Larsson T., Teneberg S., Karlsson K.A., Altraja S., Wadström T., Kersulyte D., Berg E.D., Dubois A., Petersson C., Magnusson K.M., Norberg T., Lindh F., Lundskog B.B., Arnqvist A., Hammarström L., and Borén T. Helicobacter pylori SabA adhesin in persistent infection and chronic inflammation. Science 2002, 297, 573-578. III. Lindén S., Mahdavi J., Olsen C., Borén T., Carlstedt I., and Dubois A. Effects of Helicobacter pylori inoculation on host glycosylation and H. pylori adhesion sites in rhesus monkey. Submitted. IV. Mahdavi J., Borén T., Vandenbroucke-Grauls C., and Appelmelk B.J. Limited role of lipopolysaccharide Lewis antigens in adherence of Helicobacter pylori to the human gastric epithelium. Infection & Immunity 2003, 71, 2876-2880. 5 Print & Media Abbreviations ALeb: blood group A derivative of Lewis b. BLeb: blood group B derivative of Lewis b. BabA: blood group antigen binding adhesin. cagA: cytotoxin-associated gene A. cag-PAI: cag-pathogenicity island. FimH: adhesive subunit of type I fimbriae. GERD: gastro-esophageal reflux disease. GI: gastrointestinal. IARC: International Agency for Research on Cancer. ICAM: intercellular adhesion molecule. IL-8: interleukin-8. IVEC: in vitro explant culture. LPS: lipopolysaccharide. Le a, b, x and y: Lewis blood group antigen a, b, x and y. MALT: mucosa-associated lymphoid tissue. MAP: mitogen-activated protein kinase. NADH: nicotinamide adenine dinucleotide (co-enzyme). NAP: neutrophil activating protein. NF-B: nuclear factor-B. NMR: nuclear magnetic resonance. NIH: National Institutes of Health. OMP: outer membrane protein. P-(pap)-fimbriae: pyelonephritis-associated pilus. PMN: polymorphonuclear leukocyte. RBC: red blood cell. ROS: reactive oxygen species. SabA: sialic acid binding adhesin. sLex: sialyl-Lewis x antigen. sLea: sialyl-Lewis a antigen. sdiLex: sialyl-dimeric Lewis x antigen. TLR: toll-like receptor. TNF: tumor necrosis factor alpha. 6 Print & Media UTI: urinary tract infection. VacA: vacuolating cytotoxin A. 7 Print & Media Helicobacter pylori Adhesion and Patho-adaptation The role of BabA and SabA adhesins in persistent infection and chronic inflammation Helicobacter pylori (H. pylori) is a human-specific gastric pathogen which is responsible for a spectrum of diseases ranging from superficial gastritis to gastric and duodenal ulceration, and which is also highly associated with gastric cancer. The pathogenesis of severe gastric disorders caused by H. pylori is multifactorial and involves complex interactions between the microbe and the gastric mucosa. H. pylori expresses several adhesion proteins. These molecules have important roles in the establishment of persistent infection and chronic inflammation, which cause tissue damage. The aim of this thesis was to study the attachment of this bacterium to human gastric epithelium, mediated by blood group antigens in both health and disease. One of the best-characterized H. pylori adhesins is the histo-blood group antigen binding adhesin (BabA), which binds specifically to the Lewis b antigen (Leb) in the gastric mucosa. A protective mucus layer lines the stomach. The mucosal glycosylation patterns (GPs) vary between different cell lineages, different locations along the gastrointestinal (GI) tract and different developmental stages. In addition, GPs undergo changes during malignant transformation. MUC5AC is a mucin molecule produced by the surface epithelium. Three distinctly different types of human gastrointestinal tissue were studied by bacterial adherence analysis in situ. MUC5AC is the most important carrier of Leb and the new results demonstrate that it forms major receptors for H. pylori adherence. By analysing an H. pylori babA-deletion mutant, a novel adhesin-receptor binding mode was found. Surprisingly, the mutant bound efficiently to both human gastric mucosa and to gastric mucosa of Leb transgenic mice. The sialylated and fucosylated blood group antigen, sialyl-dimeric-Lewis x (sdiLex), was structurally identified as the new receptor. A positive correlation was found between adherence of H. pylori to sialyl- Lewis x (sLex) and elevated levels of inflammation response in the human gastric mucosa. These results were supported by detailed analysis of sialylated and fucosylated blood group antigen glycosylation patterns and, in addition, in situ bacterial adherence to gastric mucosa of experimentally challenged Rhesus monkey. The cognate sialic acid- binding adhesin (SabA) was purified by the retagging technique, and the corresponding sabA-gene was identified. H. pylori lipopolysaccharide (LPS) contains various Lewis blood group antigens such as Lewis x (Lex) and Lewis y (Ley). Additional bacterial adherence modes, which are independent of the BabA and/or SabA adhesins, could possibly be mediated by Lex interactions. Adherence of a clinical isolate and its corresponding Lex mutant to human gastric mucosa with various gastric pathologies was studied in situ. The results suggest that H. pylori LPS plays a distinct but minor role in promotion of bacterial adhesion. Taken together, the results suggest mechanisms for continuous selection of H. pylori strains, involving capacity to adapt to changes in the local environment such as shifts in cell differentiation and associated glycosylation patterns. Adherence of H. pylori is dependent on both the BabA and the SabA adhesin. Multi-step dependent attachment mechanisms may direct the microbes to distinct ecological niches during persistent infections, driving the chronic inflammation processes further toward the development of peptic ulcer disease and/or malignant transformation. Key words: H. pylori, BabA, adhesin, Lewis b, MUC5AC, sialyl-dimeric-Lewis x, chronic inflammation, SabA, Lewis x, LPS. 8 Print & Media Introduction 1. A brief history of H. pylori Infection In 1982, Barry Marshall and Robin Warren managed to culture Helicobacter pylori from stomach biopsies. The material came from patients with gastritis, but their initial reports suggested that gastric inflammation and peptic ulcers might be the consequences of bacterial infections were initially met with considerable skepticism by the medical community (Marshall & Warren, 1984). Isolation of H. pylori (or Campylobacter pylori as it was first named) was a significant scientific result, but still did not establish whether the bacteria were the cause of the inflammation with which they were associated, or whether they occurred as a result of it. However, the scientific field has rapidly moved forward during the last two decades of H. pylori research, and today we know that merely 10% of infected people develop serious illness such as gastritis, peptic ulcer disease and gastric cancer, i.e. the majority (90%) of people infected with H. pylori suffer no symptoms related to their infection In 1994, the National Institutes of Health (NIH) concluded that there is a strong association between H. pylori and peptic ulcer disease and the International Agency for Research on Cancer (IARC), part of the World Health Organization (WHO), classified H. pylori as a class I carcinogen. The pathophysiology of this infection can be understood better by considering five central concepts;
Recommended publications
  • Structural and Functional Characterization of the Fimh Adhesin of Uropathogenic Escherichia Coli and Its Novel Applications
    Open Access Journal of Bacteriology and Mycology Research Article Structural and Functional Characterization of the FimH Adhesin of Uropathogenic Escherichia coli and Its Novel Applications Neamati F1, Moniri R2*, Khorshidi A1 and Saffari M1 Abstract 1Department of Microbiology and Immunology, School Type 1 fimbriae are responsible for bacterial pathogenicity and biofilm of Medicine, Kashan University of Medical Sciences, production, which are important virulence factors in uropathogenic Escherichia Kashan, Iran coli strains. Many articles are published on FimH, but each examined a specific 2Department of Microbiology, Faculty of Medicine, aspect of this protein. The current review study aimed at focusing on structure Kashan University of Medical Sciences, Qutb Ravandi and conformational changes and describing efforts to use this protein in novel Boulevard, Kashan, Iran potential treatments for urinary tract infections, typing methods, and expression *Corresponding author: Moniri R, Department of systems. The current study was the first review that briefly and effectively Microbiology, Faculty of Medicine, Kashan University of examined issues related to FimH adhesin. Medical Sciences, Qutb Ravandi Boulevard, Kashan, Iran Keywords: Uropathogenic E. coli; FimH Adhesion; FimH Typing; Received: June 05, 2020; Accepted: July 03, 2020; Conformation Switch; FimH Antagonists Published: July 10, 2020 Abbreviations FimH proteins play important roles in UPEC pathogenicity and the formation of bacterial biofilms [7]. FimH binds to mannosylated UTIs: Urinary Tract Infections; UPEC: Uropathogenic E. uroplakin proteins in the bladder lumen and invades into the Coli; IBCs: Intracellular Bacterial Communities; QIR: Quiescent superficial umbrella cells [8]. After the invasion, UPEC is expelled out Intracellular Reservoir; LD: Mannose-Binding Lectin; PD: Fimbria- of the cell in a TLR4 dependent process, or escape into the cytoplasm Incorporating Pilin; MBP: Mannose-Binding Pocket; LIBS: Ligand- [9].
    [Show full text]
  • A Focus on Protein Glycosylation in Lactobacillus
    International Journal of Molecular Sciences Review How Sweet Are Our Gut Beneficial Bacteria? A Focus on Protein Glycosylation in Lactobacillus Dimitrios Latousakis and Nathalie Juge * Quadram Institute Bioscience, The Gut Health and Food Safety Institute Strategic Programme, Norwich Research Park, Norwich NR4 7UA, UK; [email protected] * Correspondence: [email protected]; Tel.: +44-(0)-160-325-5068; Fax: +44-(0)-160-350-7723 Received: 22 November 2017; Accepted: 27 December 2017; Published: 3 January 2018 Abstract: Protein glycosylation is emerging as an important feature in bacteria. Protein glycosylation systems have been reported and studied in many pathogenic bacteria, revealing an important diversity of glycan structures and pathways within and between bacterial species. These systems play key roles in virulence and pathogenicity. More recently, a large number of bacterial proteins have been found to be glycosylated in gut commensal bacteria. We present an overview of bacterial protein glycosylation systems (O- and N-glycosylation) in bacteria, with a focus on glycoproteins from gut commensal bacteria, particularly Lactobacilli. These emerging studies underscore the importance of bacterial protein glycosylation in the interaction of the gut microbiota with the host. Keywords: protein glycosylation; gut commensal bacteria; Lactobacillus; glycoproteins; adhesins; lectins; O-glycosylation; N-glycosylation; probiotics 1. Introduction Protein glycosylation, i.e., the covalent attachment of a carbohydrate moiety onto a protein, is a highly ubiquitous protein modification in nature, and considered to be one of the post-translational modifications (PTM) targeting the most diverse group of proteins [1]. Although it was originally believed to be restricted to eukaryotic systems and later to archaea, it has become apparent nowadays that protein glycosylation is a common feature in all three domains of life.
    [Show full text]
  • Interactions of Bacteriophages with Animal and Human Organisms—Safety Issues in the Light of Phage Therapy
    International Journal of Molecular Sciences Review Interactions of Bacteriophages with Animal and Human Organisms—Safety Issues in the Light of Phage Therapy Magdalena Podlacha 1 , Łukasz Grabowski 2 , Katarzyna Kosznik-Kaw´snicka 2 , Karolina Zdrojewska 1 , Małgorzata Stasiłoj´c 1 , Grzegorz W˛egrzyn 1 and Alicja W˛egrzyn 2,* 1 Department of Molecular Biology, University of Gdansk, Wita Stwosza 59, 80-308 Gdansk, Poland; [email protected] (M.P.); [email protected] (K.Z.); [email protected] (M.S.); [email protected] (G.W.) 2 Laboratory of Phage Therapy, Institute of Biochemistry and Biophysics, Polish Academy of Sciences, Kładki 24, 80-822 Gdansk, Poland; [email protected] (Ł.G.); [email protected] (K.K.-K.) * Correspondence: [email protected]; Tel.: +48-58-523-6024 Abstract: Bacteriophages are viruses infecting bacterial cells. Since there is a lack of specific receptors for bacteriophages on eukaryotic cells, these viruses were for a long time considered to be neutral to animals and humans. However, studies of recent years provided clear evidence that bacteriophages can interact with eukaryotic cells, significantly influencing the functions of tissues, organs, and systems of mammals, including humans. In this review article, we summarize and discuss recent discoveries in the field of interactions of phages with animal and human organisms. Possibilities of penetration of bacteriophages into eukaryotic cells, tissues, and organs are discussed, and evidence of the effects of phages on functions of the immune system, respiratory system, central nervous system, gastrointestinal system, urinary tract, and reproductive system are presented and discussed.
    [Show full text]
  • HOW BLUE WATERS IS AIDING the FIGHT AGAINST SEPSIS Allocation: Illinois/520 Knh PI: Rafael C
    BLUE WATERS ANNUAL REPORT 2019 GA HOW BLUE WATERS IS AIDING THE FIGHT AGAINST SEPSIS Allocation: Illinois/520 Knh PI: Rafael C. Bernardi1 TN 2 Collaborator: Hermann E. Gaub 1University of Illinois at Urbana–Champaign 2Ludwig–Maximilians–Universität BW EXECUTIVE SUMMARY to investigate with exquisite precision the mechanics of interac- Owing to their high occurrence in ever more common hos- tion between SdrG and Fgβ. SdrG is an SD-repeat protein G and pital-acquired infections, studying the mechanisms of infection is one of the adhesin proteins of Staphylococcus epidermidis. Fgβ by Staphylococcus epidermidis and Staphylococcus aureus is of is the human fibrinogen β and is a short peptide that is part of broad interest. These pathogens can frequently form biofilms on the human extracellular matrix. implants and medical devices and are commonly involved in sep- For SMD molecular dynamics simulations, the team uses Blue sis—the human body’s often deadly response to infections. Waters’ GPU nodes (XK) and the GPU-accelerated NAMD pack- Central to the formation of biofilms is very close interaction age. In a wide-sampling strategy, the team carried out hundreds between microbial surface proteins called adhesins and compo- of SMD runs for a total of over 50 microseconds of simulation. nents of the extracellular matrix of the host. The research team To characterize the coupling between the bacterial SdrG pro- uses Blue Waters to explore how the bond between staphylococ- tein and the Fgβ peptide, the team conducts SMD simulations cal adhesin and its human target can withstand forces that so far with constant velocity stretching at multiple pulling speeds.
    [Show full text]
  • Genomics of Helicobacter Species 91
    Genomics of Helicobacter Species 91 6 Genomics of Helicobacter Species Zhongming Ge and David B. Schauer Summary Helicobacter pylori was the first bacterial species to have the genome of two independent strains completely sequenced. Infection with this pathogen, which may be the most frequent bacterial infec- tion of humanity, causes peptic ulcer disease and gastric cancer. Other Helicobacter species are emerging as causes of infection, inflammation, and cancer in the intestine, liver, and biliary tract, although the true prevalence of these enterohepatic Helicobacter species in humans is not yet known. The murine pathogen Helicobacter hepaticus was the first enterohepatic Helicobacter species to have its genome completely sequenced. Here, we consider functional genomics of the genus Helico- bacter, the comparative genomics of the genus Helicobacter, and the related genera Campylobacter and Wolinella. Key Words: Cytotoxin-associated gene; H-Proteobacteria; gastric cancer; genomic evolution; genomic island; hepatobiliary; peptic ulcer disease; type IV secretion system. 1. Introduction The genus Helicobacter belongs to the family Helicobacteriaceae, order Campylo- bacterales, and class H-Proteobacteria, which is also known as the H subdivision of the phylum Proteobacteria. The H-Proteobacteria comprise of a relatively small and recently recognized line of descent within this extremely large and phenotypically diverse phy- lum. Other genera that colonize and/or infect humans and animals include Campylobac- ter, Arcobacter, and Wolinella. These organisms are all microaerophilic, chemoorgano- trophic, nonsaccharolytic, spiral shaped or curved, and motile with a corkscrew-like motion by means of polar flagella. Increasingly, free living H-Proteobacteria are being recognized in a wide range of environmental niches, including seawater, marine sedi- ments, deep-sea hydrothermal vents, and even as symbionts of shrimp and tubeworms in these environments.
    [Show full text]
  • Structure-Based Discovery of Glycomimetic Fmlh Ligands As Inhibitors of Bacterial Adhesion During Urinary Tract Infection
    Structure-based discovery of glycomimetic FmlH ligands as inhibitors of bacterial adhesion during urinary tract infection Vasilios Kalasa,b,c, Michael E. Hibbinga,b, Amarendar Reddy Maddiralac, Ryan Chuganic, Jerome S. Pinknera,b, Laurel K. Mydock-McGranec, Matt S. Conovera,b, James W. Janetkaa,c,1, and Scott J. Hultgrena,b,1 aCenter for Women’s Infectious Disease Research, Washington University School of Medicine, St. Louis, MO 63110; bDepartment of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO 63110; and cDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110 Edited by Roy Curtiss III, University of Florida, Gainesville, FL, and approved February 13, 2018 (received for review November 20, 2017) Treatment of bacterial infections is becoming a serious clinical tive antibiotic-sparing approaches to combat bacterial pathogens. challenge due to the global dissemination of multidrug antibiotic Recently, promising efforts have been made to target the virulence resistance, necessitating the search for alternative treatments to mechanisms that cause bacterial infection. These studies have disarm the virulence mechanisms underlying these infections. provided much-needed therapeutic alternatives, which simulta- Escherichia coli – Uropathogenic (UPEC) employs multiple chaperone neously reduce the burden of antibiotic resistance and minimize usher pathway pili tipped with adhesins with diverse receptor spec- disruption of gastrointestinal microbial communities that are ificities to colonize various host tissues and habitats. For example, beneficial to human health (16). UPEC F9 pili specifically bind galactose or N-acetylgalactosamine Uropathogenic Escherichia coli (UPEC) is the main etiological epitopes on the kidney and inflamed bladder. Using X-ray structure- guided methods, virtual screening, and multiplex ELISA arrays, we agent of UTIs, accounting for greater than 80% of community- rationally designed aryl galactosides and N-acetylgalactosaminosides acquired UTIs (17, 18).
    [Show full text]
  • R Graphics Output
    883 | Desulfovibrio vulgaris | DvMF_2825 298701 | Desulfovibrio | DA2_3337 1121434 | Halodesulfovibrio aestuarii | AULY01000007_gene1045 207559 | Desulfovibrio alaskensis | Dde_0991 935942 | Desulfonatronum lacustre | KI912608_gene2193 159290 | Desulfonatronum | JPIK01000018_gene1259 1121448 | Desulfovibrio gigas | DGI_0655 1121445 | Desulfovibrio desulfuricans | ATUZ01000018_gene2316 525146 | Desulfovibrio desulfuricans | Ddes_0159 665942 | Desulfovibrio | HMPREF1022_02168 457398 | Desulfovibrio | HMPREF0326_00453 363253 | Lawsonia intracellularis | LI0397 882 | Desulfovibrio vulgaris | DVU_0784 1121413 | Desulfonatronovibrio hydrogenovorans | JMKT01000008_gene1463 555779 | Desulfonatronospira thiodismutans | Dthio_PD0935 690850 | Desulfovibrio africanus | Desaf_1578 643562 | Pseudodesulfovibrio aespoeensis | Daes_3115 1322246 | Pseudodesulfovibrio piezophilus | BN4_12523 641491 | Desulfovibrio desulfuricans | DND132_2573 1121440 | Desulfovibrio aminophilus | AUMA01000002_gene2198 1121456 | Desulfovibrio longus | ATVA01000018_gene290 526222 | Desulfovibrio salexigens | Desal_3460 1121451 | Desulfovibrio hydrothermalis | DESAM_21057 1121447 | Desulfovibrio frigidus | JONL01000008_gene3531 1121441 | Desulfovibrio bastinii | AUCX01000006_gene918 1121439 | Desulfovibrio alkalitolerans | dsat_0220 941449 | Desulfovibrio | dsx2_0067 1307759 | Desulfovibrio | JOMJ01000003_gene2163 1121406 | Desulfocurvus vexinensis | JAEX01000012_gene687 1304872 | Desulfovibrio magneticus | JAGC01000003_gene2904 573370 | Desulfovibrio magneticus | DMR_04750
    [Show full text]
  • Bacterial Virulence and Subversion of Host Defences Steven AR Webb1 and Charlene M Kahler2
    Available online http://ccforum.com/content/12/6/234 Review Bench-to-bedside review: Bacterial virulence and subversion of host defences Steven AR Webb1 and Charlene M Kahler2 1School of Medicine and Pharmacology and School of Population Health, University of Western Australia, Intensive Care Unit, Royal Perth Hospital, Wellington Street, Perth, Western Australia 6000, Australia 2School of Biomolecular, Biochemical and Chemical Science, Microbiology M502, University of Western Australia, 35 Stirling Highway, Crawley, Western Australia 6909, Australia Corresponding author: Steven AR Webb, [email protected] Published: 10 November 2008 Critical Care 2008, 12:234 (doi:10.1186/cc7091) This article is online at http://ccforum.com/content/12/6/234 © 2008 BioMed Central Ltd Abstract problem of antibiotic resistance – a problem that ICUs both Bacterial pathogens possess an array of specific mechanisms that contribute to as well as suffer from [4]. Despite the rising confer virulence and the capacity to avoid host defence mecha- incidence of antibiotic resistance in many bacterial patho- nisms. Mechanisms of virulence are often mediated by the sub- gens, interest in antibiotic drug discovery by commercial version of normal aspects of host biology. In this way the pathogen entities is in decline [5]. modifies host function so as to promote the pathogen’s survival or proliferation. Such subversion is often mediated by the specific Bacterial virulence is ‘the ability to enter into, replicate within, interaction of bacterial effector molecules with host encoded proteins and other molecules. The importance of these mechanisms and persist at host sites that are inaccessible to commensal for bacterial pathogens that cause infections leading to severe species’ [6].
    [Show full text]
  • RTX Adhesins Are Key Bacterial Surface Megaproteins in the Formation of Biofilms
    RTX Adhesins are key bacterial surface megaproteins in the formation of biofilms Citation for published version (APA): Guo, S., Vance, T. D. R., Stevens, C. A., Voets, I. K., & Davies, P. L. (2019). RTX Adhesins are key bacterial surface megaproteins in the formation of biofilms. Trends in Microbiology, 27(5), 453-467. https://doi.org/10.1016/j.tim.2018.12.003 DOI: 10.1016/j.tim.2018.12.003 Document status and date: Published: 01/05/2019 Document Version: Author’s version before peer-review Please check the document version of this publication: • A submitted manuscript is the version of the article upon submission and before peer-review. There can be important differences between the submitted version and the official published version of record. People interested in the research are advised to contact the author for the final version of the publication, or visit the DOI to the publisher's website. • The final author version and the galley proof are versions of the publication after peer review. • The final published version features the final layout of the paper including the volume, issue and page numbers. Link to publication General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal.
    [Show full text]
  • 9 Methods to Identify and Enumerate Frank and Opportunistic Bacterial Pathogens in Water and Biofilms
    9 Methods to identify and enumerate frank and opportunistic bacterial pathogens in water and biofilms N.J. Ashbolt 9.1 INTRODUCTION The vast range of heterotrophic plate count (HPC)-detected bacteria are not considered to be frank or opportunistic pathogens, as discussed elsewhere in this book (chapters 4–7) and in previous reviews (Nichols et al. 1995; LeChevallier et al. 1999; Velazquez and Feirtag 1999; Szewzyk et al. 2000). The purpose of this chapter, however, is to highlight important methodological issues when considering “traditional” and emerging procedures for detecting bacterial pathogens in both water and biofilms, rather than giving specific methods for many pathogens. 2003 World Health Organization (WHO). Heterotrophic Plate Counts and Drinking-water Safety. Edited by J. Bartram, J. Cotruvo, M. Exner, C. Fricker, A. Glasmacher. Published by IWA Publishing, London, UK. ISBN: 1 84339 025 6. Methods to identify and enumerate bacterial pathogens in water 147 The focus of this book is on heterotrophic bacteria; nevertheless, many of the methods discussed can also be directed to other (viral and protozoan) frank and opportunistic pathogens. Furthermore, a number of heterotrophs are thought to cause disease via the expression of virulence factors (Nichols et al. 1995), such as the emerging bacterial superantigens (McCormick et al. 2001). Hence, pathogen detection is not necessarily one based on particular species, but may take the approach of identifying virulence gene(s), preferably by their active expression (possibly including a range of different genera of bacteria; see virulence factors in Table 9.1). As a consequence, many species contain pathogenic and non-pathogenic strains, so ways to “fingerprint” strains of importance (from the environment and human cases) are also discussed in detail.
    [Show full text]
  • Fimh and Anti-Adhesive Therapeutics: a Disarming Strategy Against Uropathogens
    antibiotics Review FimH and Anti-Adhesive Therapeutics: A Disarming Strategy Against Uropathogens 1,2,3, 4, , 5, 6 Meysam Sarshar y , Payam Behzadi * y , Cecilia Ambrosi * , Carlo Zagaglia , Anna Teresa Palamara 1,5 and Daniela Scribano 6,7 1 Laboratory Affiliated to Institute Pasteur Italia-Cenci Bolognetti Foundation, Department of Public Health and Infectious Diseases, Sapienza University of Rome, 00185 Rome, Italy; [email protected] (M.S.); [email protected] (A.T.P.) 2 Research Laboratories, Bambino Gesù Children’s Hospital, IRCCS, 00146 Rome, Italy 3 Microbiology Research Center (MRC), Pasteur Institute of Iran, Tehran 1316943551, Iran 4 Department of Microbiology, College of Basic Sciences, Shahr-e-Qods Branch, Islamic Azad University, Tehran 37541-374, Iran 5 IRCCS San Raffaele Pisana, Department of Human Sciences and Promotion of the Quality of Life, San Raffaele Roma Open University, 00166 Rome, Italy 6 Department of Public Health and Infectious Diseases, Sapienza University of Rome, 00185 Rome, Italy; [email protected] (C.Z.); [email protected] (D.S.) 7 Dani Di Giò Foundation-Onlus, 00193 Rome, Italy * Correspondence: [email protected] (P.B.); [email protected] (C.A.) These authors contributed equally to this work. y Received: 30 June 2020; Accepted: 8 July 2020; Published: 10 July 2020 Abstract: Chaperone-usher fimbrial adhesins are powerful weapons against the uropathogens that allow the establishment of urinary tract infections (UTIs). As the antibiotic therapeutic strategy has become less effective in the treatment of uropathogen-related UTIs, the anti-adhesive molecules active against fimbrial adhesins, key determinants of urovirulence, are attractive alternatives.
    [Show full text]
  • Co-Evolution of Epibiotic Bacteria Associated with the Novel
    Identity of epibiotic bacteria on symbiontid euglenozoans in O2-depleted marine sediments: evidence for symbiont and host co-evolution 1*Edgcomb, V.P., 2Breglia, S.A., 2Yubuki, N., 3Beaudoin, D., 4Patterson, D.J., 2Leander, B.S. and 1Bernhard, J.M. 1Woods Hole Oceanographic Institution, Geology and Geophysics Department, Woods Hole, MA 02543, USA 2Canadian Institute for Advanced Research, Program in Integrated Microbial Biodiversity, Departments of Botany and Zoology, University of British Columbia, 6270 University Boulevard, Vancouver, BC V6T 1Z4, Canada 3Woods Hole Oceanographic Institution, Biology Department, Woods Hole, MA 02543, USA 4Marine Biological Laboratory, Biodiversity Informatics, Marine Biological Laboratory, Woods Hole, Massachusetts 02543, USA. Running title: Identity of epibionts on symbiontid euglenozoans Keywords: Symbiontida, epibionts, epsilon-proteobacteria, Calkinsia, Bihospites, co-evolution, sulfide Subject categories: 1) Microbe-microbe and microbe-host interactions 2) Evolutionary genetics *Corresponding author Abstract A distinct subgroup of euglenozoans, referred to as the “Symbiontida,” has been described from oxygen-depleted and sulfidic marine environments. By definition, all members of this group carry epibionts that are intimately associated with underlying mitochondrion-derived organelles beneath the surface of the hosts. We have used molecular phylogenetic and ultrastructural evidence to identify the rod-shaped epibionts of two members of this group, Calkinsia aureus and Bihospites bacati, hand-picked from sediments from two separate oxygen-depleted, sulfidic environments. We identify their epibionts as closely related sulfur or sulfide oxidizing members of the Epsilon proteobacteria. The Epsilon proteobacteria generally play a significant role in deep-sea habitats as primary colonizers, primary producers, and/or in symbiotic associations. The epibionts likely fulfill a role in detoxifying the immediate surrounding environment for these two different hosts.
    [Show full text]