Auranofin Exerts Broad-Spectrum Bactericidal Activities by Targeting Thiol-Redox Homeostasis
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
The Significance of N-Methylation of Bacillithiol on Its Biological Activity As a Redox Cofactor
THE SIGNIFICANCE OF N-METHYLATION OF BACILLITHIOL ON ITS BIOLOGICAL ACTIVITY AS A REDOX COFACTOR Hazel Nicole Moxham A thesis submitted for the Degree of Master of Science by Research University of East Anglia School of Pharmacy September 2018 This copy of the thesis has been supplied on condition that anyone who consults it is understood to recognise that its copyright rests with the author and that use of any information derived therefrom must be in accordance with current UK Copyright Law. In addition, any quotation or extract must include full attribution. 1 Abstract Low molecular weight thiols play a crucial role in a multitude of biological processes such as maintaining redox homeostasis and the detoxification of chemical stressors. Different classes of microorganisms utilise different low molecular weight thiols. For example: glutathione is found eukaryotes and most gram-negative bacteria, mycothiol is found in the actinomycetes, and bacillithiol is found in the firmicutes. This study focused on N-methyl-bacillithiol, the novel low molecular weight thiol found in the green sulfur bacteria. Due to the unavailability of the thiol, the biophysical properties of a series of related derivatives were analysed and compared. Six thiols were examined so that each of their macroscopic and microscopic pKa values as well as their thiol-disulfide exchange rate constants and their copper catalysed autoxidation rates were isolated. The results determined that each thiol maintains its own set of biophysical properties that are unique to each compound. These were then observed alongside others within the literature to compare and contrast. Predictions were made regarding the properties of N-methylated bacillithiol by associating the data of those with similar structural differences. -
Investigations Into Intracellular Thiols of Biological Importance
Investigations into Intracellular Thiols of Biological Importance by Christine Elizabeth Hand A thesis presented to the University of Waterloo in fulfillment of the thesis requirement for the degree of Doctor of Philosophy in Chemistry Waterloo, Ontario, Canada, 2007 © Christine Elizabeth Hand 2007 AUTHOR'S DECLARATION I hereby declare that I am the sole author of this thesis. This is a true copy of the thesis, including any required final revisions, as accepted by my examiners. I understand that my thesis may be made electronically available to the public. ii Abstract The presence of thiols in living systems is critical for the maintenance of cellular redox homeostasis, the maintenance of protein thiol-disulfide ratios and the protection of cells from reactive oxygen species. In addition to the well studied tripeptide glutathione (γ-Glu-Cys-Gly), a number of compounds have been identified that contribute to these essential cellular roles. Many of these molecules are of great clinical interest due to their essential role in the biochemistry of a number of deadly pathogens, as well as their possible role as therapeutic agents in the treatment of a number of diseases. A series of studies were undertaken using theoretical, chemical and biochemical approaches on a selection of thiols, ergothioneine, the ovothiols and mycothiol, to further our understanding of these necessary biological components. Ergothioneine is present at significant physiological levels in humans and other mammals; however, a definitive role for this thiol has yet to be determined. It has been implicated in radical scavenging in vivo and shows promise as a therapeutic agent against disease states caused by oxidative damage. -
Glutathione Disulfide and S-Nitrosoglutathione Detoxification
FEBS Letters 583 (2009) 3215–3220 journal homepage: www.FEBSLetters.org Glutathione disulfide and S-nitrosoglutathione detoxification by Mycobacterium tuberculosis thioredoxin system Rodgoun Attarian, Chelsea Bennie, Horacio Bach, Yossef Av-Gay * Department of Medicine, Division of Infectious Diseases, University of British Columbia, Vancouver, British Columbia, Canada V5Z 3J5 article info a b s t r a c t Article history: Mycobacterium tuberculosis resides within alveolar macrophages. These phagocytes produce reac- Received 1 August 2009 tive nitrogen and oxygen intermediates to combat the invading pathogens. The macrophage gluta- Accepted 1 September 2009 thione (GSH) pool reduces nitric oxide (NO) to S-nitrosoglutathione (GSNO). Both glutathione Available online 6 September 2009 disulfide (GSSG) and GSNO possess mycobactericidal activities in vitro. In this study we demonstrate that M. tuberculosis thioredoxin system, comprises of thioredoxin reductase B2 and thioredoxin C Edited by Stuart Ferguson reduces the oxidized form of the intracellular mycothiol (MSSM) and is able to efficiently reduce GSSG and GSNO in vitro. Our study suggests that the thioredoxin system provide a general reduction Keywords: mechanism to cope with oxidative stress associated with the microbe’s metabolism as well as to Mycobacteria Tuberculosis detoxify xenobiotics produced by the host. Thioredoxin Ó 2009 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved. Glutathione S-nitrosoglutathione Mycothiol 1. Introduction defense against oxygen toxicity [4]. M. tuberculosis lacks GSH and instead uses mycothiol (MSH), which functions as the mycobacte- Mycobacterium tuberculosis, the causative agent of tuberculosis, ria’s main anti-oxidant defense [4]. is a human intracellular pathogen responsible for two million Thioredoxin systems [5] are key ubiquitous thiol-disulfide deaths worldwide per annum [1]. -
(12) Patent Application Publication (10) Pub. No.: US 2016/0186168 A1 Konieczka Et Al
US 2016O1861 68A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2016/0186168 A1 Konieczka et al. (43) Pub. Date: Jun. 30, 2016 (54) PROCESSES AND HOST CELLS FOR Related U.S. Application Data GENOME, PATHWAY. AND BIOMOLECULAR (60) Provisional application No. 61/938,933, filed on Feb. ENGINEERING 12, 2014, provisional application No. 61/935,265, - - - filed on Feb. 3, 2014, provisional application No. (71) Applicant: ENEVOLV, INC., Cambridge, MA (US) 61/883,131, filed on Sep. 26, 2013, provisional appli (72) Inventors: Jay H. Konieczka, Cambridge, MA cation No. 61/861,805, filed on Aug. 2, 2013. (US); James E. Spoonamore, Publication Classification Cambridge, MA (US); Ilan N. Wapinski, Cambridge, MA (US); (51) Int. Cl. Farren J. Isaacs, Cambridge, MA (US); CI2N 5/10 (2006.01) Gregory B. Foley, Cambridge, MA (US) CI2N 15/70 (2006.01) CI2N 5/8 (2006.01) (21) Appl. No.: 14/909, 184 (52) U.S. Cl. 1-1. CPC ............ CI2N 15/1082 (2013.01); C12N 15/81 (22) PCT Filed: Aug. 4, 2014 (2013.01); C12N 15/70 (2013.01) (86). PCT No.: PCT/US1.4/49649 (57) ABSTRACT S371 (c)(1), The present disclosure provides compositions and methods (2) Date: Feb. 1, 2016 for genomic engineering. Patent Application Publication Jun. 30, 2016 Sheet 1 of 4 US 2016/O186168 A1 Patent Application Publication Jun. 30, 2016 Sheet 2 of 4 US 2016/O186168 A1 &&&&3&&3&&**??*,º**)..,.: ××××××××××××××××××××-************************** Patent Application Publication Jun. 30, 2016 Sheet 3 of 4 US 2016/O186168 A1 No.vaegwzºkgwaewaeg Patent Application Publication Jun. 30, 2016 Sheet 4 of 4 US 2016/O186168 A1 US 2016/01 86168 A1 Jun. -
BIOSYNTHETIC and FUNCTIONAL STUDIES of BACILLITHIOL in GRAM- POSITIVE BACTERIA by ZHONG FANG a Dissertation Submitted to The
BIOSYNTHETIC AND FUNCTIONAL STUDIES OF BACILLITHIOL IN GRAM- POSITIVE BACTERIA BY ZHONG FANG A Dissertation Submitted to the Graduate Faculty of WAKE FOREST UNIVERSITY GRADUATE SCHOOL OF ARTS AND SCIENCES in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY Chemistry May 2015 Winston-Salem, North Carolina Approved By: Patricia C. Dos Santos, Ph.D., Advisor H. Alexander Claiborne Jr, Chair Rebecca W. Alexander, Ph.D. Stephen Bruce King, Ph.D. Mark E. Welker, Ph.D. TABLE OF CONTENTS LIST OF ILLUSTRATIONS AND TABLES ....................................................... iv LIST OF ABBREVIATIONS ............................................................................... viii ABSTRACT .......................................................................................................... ix CHAPTER 1 Introduction ..................................................................................... 1 1.1 Biothiol ........................................................................................................ 1 1.2 Cysteine ...................................................................................................... 2 1.3 Glutathione .................................................................................................. 6 1.4 Mycothiol ................................................................................................... 10 1.5 Bacillithiol .................................................................................................. 17 CHAPTER 2 Cross-functionalities -
Elucidation of Mechanisms of Antibiotic Subversion in Mycobacteria
Elucidation of mechanisms of antibiotic subversion in mycobacteria Krupa Naran Division of Medical Microbiology Department of Clinical Laboratory Sciences University of Cape Town A thesis submitted to the Faculty of Health Sciences, University of Cape Town, in fulfilment of the requirements for the degree of Doctor of Philosophy. February 2015. The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgement of the source. The thesis is to be used for private study or non- commercial research purposes only. Published by the University of Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University of Cape Town There was a beginning of time. There was a time before the beginning of time. There was a time before the time before the beginning of time. There is being. If there is being, there must be non-being. If there is non-being, There must have been a time when even non-being didn’t exist. Suddenly there was non-being. But can any non-being really exist, And can being not-exist? I just said something, But did what I just said really Say anything, or not? ―Chuang-tzu i Declaration I declare that this thesis is my own unaided work. It is being submitted for the degree of Doctor of Philosophy at the University of Cape Town. It has not been submitted for any degree or examination at any other university. Krupa Naran 16 February 2015 Date ii Abstract The intrinsic resistance of Mycobacterium tuberculosis (Mtb) to antibiotics is generally attributed to multiple factors, most significantly the low permeability of the mycobacterial cell wall, the operation of various drug inactivating systems, and the activity of efflux pumps. -
All Enzymes in BRENDA™ the Comprehensive Enzyme Information System
All enzymes in BRENDA™ The Comprehensive Enzyme Information System http://www.brenda-enzymes.org/index.php4?page=information/all_enzymes.php4 1.1.1.1 alcohol dehydrogenase 1.1.1.B1 D-arabitol-phosphate dehydrogenase 1.1.1.2 alcohol dehydrogenase (NADP+) 1.1.1.B3 (S)-specific secondary alcohol dehydrogenase 1.1.1.3 homoserine dehydrogenase 1.1.1.B4 (R)-specific secondary alcohol dehydrogenase 1.1.1.4 (R,R)-butanediol dehydrogenase 1.1.1.5 acetoin dehydrogenase 1.1.1.B5 NADP-retinol dehydrogenase 1.1.1.6 glycerol dehydrogenase 1.1.1.7 propanediol-phosphate dehydrogenase 1.1.1.8 glycerol-3-phosphate dehydrogenase (NAD+) 1.1.1.9 D-xylulose reductase 1.1.1.10 L-xylulose reductase 1.1.1.11 D-arabinitol 4-dehydrogenase 1.1.1.12 L-arabinitol 4-dehydrogenase 1.1.1.13 L-arabinitol 2-dehydrogenase 1.1.1.14 L-iditol 2-dehydrogenase 1.1.1.15 D-iditol 2-dehydrogenase 1.1.1.16 galactitol 2-dehydrogenase 1.1.1.17 mannitol-1-phosphate 5-dehydrogenase 1.1.1.18 inositol 2-dehydrogenase 1.1.1.19 glucuronate reductase 1.1.1.20 glucuronolactone reductase 1.1.1.21 aldehyde reductase 1.1.1.22 UDP-glucose 6-dehydrogenase 1.1.1.23 histidinol dehydrogenase 1.1.1.24 quinate dehydrogenase 1.1.1.25 shikimate dehydrogenase 1.1.1.26 glyoxylate reductase 1.1.1.27 L-lactate dehydrogenase 1.1.1.28 D-lactate dehydrogenase 1.1.1.29 glycerate dehydrogenase 1.1.1.30 3-hydroxybutyrate dehydrogenase 1.1.1.31 3-hydroxyisobutyrate dehydrogenase 1.1.1.32 mevaldate reductase 1.1.1.33 mevaldate reductase (NADPH) 1.1.1.34 hydroxymethylglutaryl-CoA reductase (NADPH) 1.1.1.35 3-hydroxyacyl-CoA -
(12) Patent Application Publication (10) Pub. No.: US 2015/0240226A1 Mathur Et Al
US 20150240226A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2015/0240226A1 Mathur et al. (43) Pub. Date: Aug. 27, 2015 (54) NUCLEICACIDS AND PROTEINS AND CI2N 9/16 (2006.01) METHODS FOR MAKING AND USING THEMI CI2N 9/02 (2006.01) CI2N 9/78 (2006.01) (71) Applicant: BP Corporation North America Inc., CI2N 9/12 (2006.01) Naperville, IL (US) CI2N 9/24 (2006.01) CI2O 1/02 (2006.01) (72) Inventors: Eric J. Mathur, San Diego, CA (US); CI2N 9/42 (2006.01) Cathy Chang, San Marcos, CA (US) (52) U.S. Cl. CPC. CI2N 9/88 (2013.01); C12O 1/02 (2013.01); (21) Appl. No.: 14/630,006 CI2O I/04 (2013.01): CI2N 9/80 (2013.01); CI2N 9/241.1 (2013.01); C12N 9/0065 (22) Filed: Feb. 24, 2015 (2013.01); C12N 9/2437 (2013.01); C12N 9/14 Related U.S. Application Data (2013.01); C12N 9/16 (2013.01); C12N 9/0061 (2013.01); C12N 9/78 (2013.01); C12N 9/0071 (62) Division of application No. 13/400,365, filed on Feb. (2013.01); C12N 9/1241 (2013.01): CI2N 20, 2012, now Pat. No. 8,962,800, which is a division 9/2482 (2013.01); C07K 2/00 (2013.01); C12Y of application No. 1 1/817,403, filed on May 7, 2008, 305/01004 (2013.01); C12Y 1 1 1/01016 now Pat. No. 8,119,385, filed as application No. PCT/ (2013.01); C12Y302/01004 (2013.01); C12Y US2006/007642 on Mar. 3, 2006. -
Redox Homeostasis in Mycobacteria: the Key to Tuberculosis Control?
expert reviews http://www.expertreviews.org/ in molecular medicine Redox homeostasis in mycobacteria: the key to tuberculosis control? Ashwani Kumar1,*, Aisha Farhana2,*, Loni Guidry2, Vikram Saini2, Mary Hondalus3 and Adrie J.C. Steyn2,4,† Mycobacterium tuberculosis (Mtb) is a metabolically flexible pathogen that has the extraordinary ability to sense and adapt to the continuously changing host environment experienced during decades of persistent infection. Mtb is tuberculosis control? continually exposed to endogenous reactive oxygen species (ROS) as part of normal aerobic respiration, as well as exogenous ROS and reactive nitrogen species (RNS) generated by the host immune system in response to infection. The magnitude of tuberculosis (TB) disease is further amplified by exposure to xenobiotics from the environment such as cigarette smoke and air pollution, causing disruption of the intracellular prooxidant–antioxidant balance. Both oxidative and reductive stresses induce redox cascades that alter Mtb signal transduction, DNA and RNA synthesis, protein synthesis and antimycobacterial drug resistance. As reviewed in this article, Mtb has evolved specific mechanisms to protect itself against endogenously produced oxidants, as well as defend against host and environmental oxidants and reductants found specifically within the microenvironments of the lung. Maintaining an appropriate redox balance is critical to the clinical outcome because several antimycobacterial prodrugs are only effective upon bioreductive activation. Redox homeostasis in mycobacteria: the key to Proper homeostasis of oxido-reductive systems is essential for Mtb survival, persistence and subsequent reactivation. The progress and remaining deficiencies in understanding Mtb redox homeostasis are also discussed. In 1890, Koch stated publicly that he had 1921, Calmette and Guerin introduced the discovered the cure for tuberculosis (TB). -
Springer Handbook of Enzymes
Dietmar Schomburg Ida Schomburg (Eds.) Springer Handbook of Enzymes Alphabetical Name Index 1 23 © Springer-Verlag Berlin Heidelberg New York 2010 This work is subject to copyright. All rights reserved, whether in whole or part of the material con- cerned, specifically the right of translation, printing and reprinting, reproduction and storage in data- bases. The publisher cannot assume any legal responsibility for given data. Commercial distribution is only permitted with the publishers written consent. Springer Handbook of Enzymes, Vols. 1–39 + Supplements 1–7, Name Index 2.4.1.60 abequosyltransferase, Vol. 31, p. 468 2.7.1.157 N-acetylgalactosamine kinase, Vol. S2, p. 268 4.2.3.18 abietadiene synthase, Vol. S7,p.276 3.1.6.12 N-acetylgalactosamine-4-sulfatase, Vol. 11, p. 300 1.14.13.93 (+)-abscisic acid 8’-hydroxylase, Vol. S1, p. 602 3.1.6.4 N-acetylgalactosamine-6-sulfatase, Vol. 11, p. 267 1.2.3.14 abscisic-aldehyde oxidase, Vol. S1, p. 176 3.2.1.49 a-N-acetylgalactosaminidase, Vol. 13,p.10 1.2.1.10 acetaldehyde dehydrogenase (acetylating), Vol. 20, 3.2.1.53 b-N-acetylgalactosaminidase, Vol. 13,p.91 p. 115 2.4.99.3 a-N-acetylgalactosaminide a-2,6-sialyltransferase, 3.5.1.63 4-acetamidobutyrate deacetylase, Vol. 14,p.528 Vol. 33,p.335 3.5.1.51 4-acetamidobutyryl-CoA deacetylase, Vol. 14, 2.4.1.147 acetylgalactosaminyl-O-glycosyl-glycoprotein b- p. 482 1,3-N-acetylglucosaminyltransferase, Vol. 32, 3.5.1.29 2-(acetamidomethylene)succinate hydrolase, p. 287 Vol. -
Inhibition of a Mycothiol Biosynthetic Enzyme and a Detoxification Enzyme As Anti Tubercular Drug Targets
The copyright of this thesis vests in the author. No quotation from it or information derived from it is to be published without full acknowledgementTown of the source. The thesis is to be used for private study or non- commercial research purposes only. Cape Published by the University ofof Cape Town (UCT) in terms of the non-exclusive license granted to UCT by the author. University Mycothiol Disulfide Reductase as a Drug Target A thesis Presented in fulfilment of the requirement of the degree of DOCTOR OF PHILOSOPHY Department of Clinical Laboratory Sciences UNIVERSITY OF CAPE TOWN In the Division of Chemical Pathology APRIL 2010 Vuyo Bhongolethu Mavumengwana ii DECLARATION The work contained in this thesis is original, except where indicated and acknowledged. No portion of this work has been submitted for another degree at this or any other university. The University of Cape Town may reproduce the contents in whole or in part for the purposes of research. V.B. Mavumengwana April 2010 iii ACKNOWLEDGEMENTS I wish to express my gratitude to my supervisors Prof D.J Steenkamp and Prof. D.W. Gammon for their supervision, guidance and teaching throughout this study. I would also like to thank Dr Levecque, Mr Munyololo and Dr Kinfe for their support and assistance during my stay in the chemistry department. I’m indebted to my colleagues in the Division of Chemical Pathology, Dr Marakalala for testing my synthetic compounds against MshB and Mca and Dr Williams for cloning mtr in pSD26. I’m grateful to Gabriel and Nick for their friendship and willingness to help whenever I needed them. -
A Dissertation Entitled Structural and Enzymatic Studies of Essential
A Dissertation entitled Structural and Enzymatic Studies of Essential Enzymes in Mycobacterium tuberculosis by Jared J. Lindenberger Submitted to the Graduate Faculty as partial fulfillment of the requirements for the Doctor of Philosophy Degree in Chemistry _________________________________________ Dr. Donald R. Ronning, Committee Chair _________________________________________ Dr. James T. Slama, Committee Member _________________________________________ Dr. Steven J. Sucheck, Committee Member _________________________________________ Dr. John J. Bellizzi, Committee Member _________________________________________ Dr. Patricia R. Komuniecki, Dean College of Graduate Studies The University of Toledo August 2015 Copyright 2015, Jared J. Lindenberger This document is copyrighted material. Under copyright law, no parts of this document may be reproduced without the expressed permission of the author. An Abstract of Structural and Enzymatic Studies of Essential Enzymes in Mycobacterium tuberculosis by Jared J. Lindenberger Submitted to the Graduate Faculty as partial fulfillment of the requirements for the Doctor of Philosophy Degree in Chemistry The University of Toledo August 2015 Tuberculosis (TB) continues to be a global health threat. The World Health Organization estimates that nearly 8.6 million new TB cases were reported, and 1.3 million people succumbed to the disease in 2013. The persistence of TB globally is due in part to the hardiness of the bacterium Mycobacterium tuberculosis (M. tb), the etiological agent of TB, and the ability of M. tb to enter a dormant phase that complicates treatment. Typical therapeutic regimens to treat M. tb infections require at least 6 months of anti-tubercular drugs and patient non-compliance during this treatment period is thought to contribute to the selection of antibiotic resistant strains. In 2012, 1 in 5 cases of TB were multiply drug resistant (MDR-TB), while nearly 1 in 10 of these MDR-TB cases was also extensively drug resistant (XDR-TB).