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Phylogenetic Analysis of Anostracans (Branchiopoda: Anostraca) Inferred from Nuclear 18S Ribosomal DNA (18S Rdna) Sequences
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 25 (2002) 535–544 www.academicpress.com Phylogenetic analysis of anostracans (Branchiopoda: Anostraca) inferred from nuclear 18S ribosomal DNA (18S rDNA) sequences Peter H.H. Weekers,a,* Gopal Murugan,a,1 Jacques R. Vanfleteren,a Denton Belk,b and Henri J. Dumonta a Department of Biology, Ghent University, Ledeganckstraat 35, B-9000 Ghent, Belgium b Biology Department, Our Lady of the Lake University of San Antonio, San Antonio, TX 78207, USA Received 20 February 2001; received in revised form 18 June 2002 Abstract The nuclear small subunit ribosomal DNA (18S rDNA) of 27 anostracans (Branchiopoda: Anostraca) belonging to 14 genera and eight out of nine traditionally recognized families has been sequenced and used for phylogenetic analysis. The 18S rDNA phylogeny shows that the anostracans are monophyletic. The taxa under examination form two clades of subordinal level and eight clades of family level. Two families the Polyartemiidae and Linderiellidae are suppressed and merged with the Chirocephalidae, of which together they form a subfamily. In contrast, the Parartemiinae are removed from the Branchipodidae, raised to family level (Parartemiidae) and cluster as a sister group to the Artemiidae in a clade defined here as the Artemiina (new suborder). A number of morphological traits support this new suborder. The Branchipodidae are separated into two families, the Branchipodidae and Ta- nymastigidae (new family). The relationship between Dendrocephalus and Thamnocephalus requires further study and needs the addition of Branchinella sequences to decide whether the Thamnocephalidae are monophyletic. Surprisingly, Polyartemiella hazeni and Polyartemia forcipata (‘‘Family’’ Polyartemiidae), with 17 and 19 thoracic segments and pairs of trunk limb as opposed to all other anostracans with only 11 pairs, do not cluster but are separated by Linderiella santarosae (‘‘Family’’ Linderiellidae), which has 11 pairs of trunk limbs. -
Ponds and Wetlands in Cities for Biodiversity and Climate Adaptation
7th European Pond Conservation Network Workshop + LIFE CHARCOS Seminar and 12th Annual SWS European Chapter Meeting - Abstract book TITLE 7th European Pond Conservation Network Workshop + LIFE CHARCOS Seminar and 12th Annual SWS European Chapter Meeting - Abstract book EDITOR Universidade do Algarve EDITION 1st edition, May 2017 FARO Universidade do Algarve Faculdade de Ciências e Tecnhologia Campus de Gambelas 8005-139 Faro Portugal DESIGN Gobius PAGE LAYOUT Susana Imaginário Lina Lopes Untaped Events ISBN 978-989-8859-10-5 1 7th European Pond Conservation Network Workshop + LIFE CHARCOS Seminar and 12th Annual SWS European Chapter Meeting - Abstract book Contents 7TH EUROPEAN POND CONSERVATION NETWORK WORKSHOP + LIFE CHARCOS SEMINAR ............................................................................................................ 9 Workshop Committees............................................................................................................. 10 Welcome .................................................................................................................................. 11 Programme ............................................................................................................................... 12 Abstracts of plenary lectures .................................................................................................... 14 PL04 - Life nature projects and pond management: Experiences and results ......................... 15 PL02 - Beyond communities: Linking environmental and -
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe
Identification and Modelling of a Representative Vulnerable Fish Species for Pesticide Risk Assessment in Europe Von der Fakultät für Mathematik, Informatik und Naturwissenschaften der RWTH Aachen University zur Erlangung des akademischen Grades eines Doktors der Naturwissenschaften genehmigte Dissertation vorgelegt von Lara Ibrahim, M.Sc. aus Mazeraat Assaf, Libanon Berichter: Universitätsprofessor Dr. Andreas Schäffer Prof. Dr. Christoph Schäfers Tag der mündlichen Prüfung: 30. Juli 2015 Diese Dissertation ist auf den Internetseiten der Universitätsbibliothek online verfügbar Erklärung Ich versichere, dass ich diese Doktorarbeit selbständig und nur unter Verwendung der angegebenen Hilfsmittel angefertigt habe. Weiterhin versichere ich, die aus benutzten Quellen wörtlich oder inhaltlich entnommenen Stellen als solche kenntlich gemacht zu haben. Lara Ibrahim Aachen, am 18 März 2015 Zusammenfassung Die Zulassung von Pflanzenschutzmitteln in der Europäischen Gemeinschaft verlangt unter anderem eine Abschätzung des Risikos für Organismen in der Umwelt, die nicht Ziel der Anwendung sind. Unvertretbare Auswirkungen auf den Naturhalt sollen vermieden werden. Die ökologische Risikoanalyse stellt die dafür benötigten Informationen durch eine Abschätzung der Exposition der Organismen und der sich daraus ergebenden Effekte bereit. Die Effektabschätzung beruht dabei hauptsächlich auf standardisierten ökotoxikologischen Tests im Labor mit wenigen, oft nicht einheimischen Stellvertreterarten. In diesen Tests werden z. B. Effekte auf das Überleben, das Wachstum und/oder die Reproduktion von Fischen bei verschiedenen Konzentrationen der Testsubstanz gemessen und Endpunkte wie die LC50 (Lethal Concentrations for 50%) oder eine NOEC (No Observed Effect Concentration, z. B. für Wachstum oder Reproduktionsparameter) abgeleitet. Für Fische und Wirbeltiere im Allgemeinen beziehen sich die spezifischen Schutzziele auf das Überleben von Individuen und die Abundanz und Biomasse von Populationen. -
Tanymastix Stagnalis Linn. and Its Occurrence in Norway
Tanymastix stagnalis Linn. and its occurrence in Norway. BY Robert Gurney M. A. (Narfolk). In these days it is necessary to use much circumspection in refer- ring to any European species of Phyllopod, since so many changes have been made recently in their nomenclature. It is important, therefore, to make clear in the first instance to what species I am alluding and to justify its identification with the species described by Linnaeus. Now Linnaeus, in his Fauna Suecica, describes one species only of Branchipodidae under the name of Cancer stagnalis, and, in his Systema Naturae, he gives as a synonym of it Schaeffer's ,,Apus pisciformis"l). The description given is inadequate to determine by itself to what species he refers, with the exception that the colour of the egg-sac as there given is certainly not the same as in Schaeffers's species'). We have the authority of Prof. Lilljeborg that one species of Branchipod occurs commonly near Upsala and that this species is not the same as that described by Schaeffer, which is not known to occur in Sweden at all. We have therefore this dilemma; - Either Linnaeus overlooked a rather conspicuous animal which was common in his own neighbourhood and, in place of it, recorded as a member of the Swedish fauna a species which does not occur in Sweden; or he was in error in supposing that the two species described by himself and by Schaeffer were identical. Such an error as the latter is by no means unusual, whereas the first alternative seems to me incredible. -
Sovraccoperta Fauna Inglese Giusta, Page 1 @ Normalize
Comitato Scientifico per la Fauna d’Italia CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA FAUNA THE ITALIAN AND DISTRIBUTION OF CHECKLIST 10,000 terrestrial and inland water species and inland water 10,000 terrestrial CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA 10,000 terrestrial and inland water species ISBNISBN 88-89230-09-688-89230- 09- 6 Ministero dell’Ambiente 9 778888988889 230091230091 e della Tutela del Territorio e del Mare CH © Copyright 2006 - Comune di Verona ISSN 0392-0097 ISBN 88-89230-09-6 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, without the prior permission in writing of the publishers and of the Authors. Direttore Responsabile Alessandra Aspes CHECKLIST AND DISTRIBUTION OF THE ITALIAN FAUNA 10,000 terrestrial and inland water species Memorie del Museo Civico di Storia Naturale di Verona - 2. Serie Sezione Scienze della Vita 17 - 2006 PROMOTING AGENCIES Italian Ministry for Environment and Territory and Sea, Nature Protection Directorate Civic Museum of Natural History of Verona Scientifi c Committee for the Fauna of Italy Calabria University, Department of Ecology EDITORIAL BOARD Aldo Cosentino Alessandro La Posta Augusto Vigna Taglianti Alessandra Aspes Leonardo Latella SCIENTIFIC BOARD Marco Bologna Pietro Brandmayr Eugenio Dupré Alessandro La Posta Leonardo Latella Alessandro Minelli Sandro Ruffo Fabio Stoch Augusto Vigna Taglianti Marzio Zapparoli EDITORS Sandro Ruffo Fabio Stoch DESIGN Riccardo Ricci LAYOUT Riccardo Ricci Zeno Guarienti EDITORIAL ASSISTANT Elisa Giacometti TRANSLATORS Maria Cristina Bruno (1-72, 239-307) Daniel Whitmore (73-238) VOLUME CITATION: Ruffo S., Stoch F. -
Planning for Biodiversity: Bringing Agriculture
United States Department of Planning for Biodiversity: Bringing Agriculture Forest Service Research and Management Together Pacific Southwest Research Station Proceedings of a Symposium for the South Coast Ecoregion General Technical Report February 29 - March 2, 2000 Pomona, California PSW-GTR-195 December 2005 Abstract Kus, Barbara E., and Beyers, Jan L., technical coordinators. 2005. Planning for Biodiversity: Bringing Research and Management Together. Gen. Tech. Rep. PSW-GTR-195. Albany, CA: Pacific Southwest Research Station, Forest Service, U.S. Department of Agriculture; 274 p. Southern California, recognized as a major center of biodiversity, contains some of the most diverse habitats of any landscape in North America. The ever-expanding human popula- tion of the region desires land, water, resources, and recreation, creating conflict with the habitat requirements of many rare species. Managing resources in a way that maximizes biodiversity in remaining habitats, while providing opportunities for other appropriate uses of the land, presents a formidable challenge, requiring coordination between scientists and resource managers. The papers in this proceedings volume reflect the breadth of issues facing the science and management communities in southern California, ranging from the threats of fire, air pollution, grazing, exotic species invasion, and habitat loss on native habi- tats and sensitive species, including birds, mammals, reptiles and amphibians, to the role of mycorrhizal fungi as indicators of biological change. Retrieval Terms: air pollution impacts, biological diversity, California south coast ecoregion, fire management, habitat management, rare species Technical Coordinators Barbara E. Kus is Research Ecologist with the U.S. Geological Survey Biological Re- sources Division, Western Ecological Research Center, San Diego Field Station, 4165 Spru- ance Road, Suite 200, San Diego, California 92101. -
Updated Checklist and Distribution of Large Branchiopods (Branchiopoda: Anostraca, Notostraca, Spinicaudata) in Tunisia
Biogeographia – The Journal of Integrative Biogeography 31 (2016): 27–53 Updated checklist and distribution of large branchiopods (Branchiopoda: Anostraca, Notostraca, Spinicaudata) in Tunisia FEDERICO MARRONE1,*, MICHAEL KORN2, FABIO STOCH3, LUIGI NASELLI- FLORES1, SOUAD TURKI4 1 Dept. STEBICEF, University of Palermo, via Archirafi, 18, I-90123 Palermo, Italy 2 Limnological Institute, University of Konstanz, Mainaustr. 252, D-78464 Konstanz & DNA-Laboratory, Museum of Zoology, Senckenberg Natural History Collections Dresden, Königsbrücker Landstrasse 159, D- 01109 Dresden, Germany 3 Dept. of Life, Health & Environmental Sciences, University of L’Aquila, Via Vetoio, I-67100 Coppito, L'Aquila, Italy 4 Institut National des Sciences et Technologies de la Mer, Rue du 02 mars 1934, 28, T-2025 Salammbô, Tunisia * e-mail corresponding author: [email protected] Keywords: Branchinectella media, fauna of Maghreb, freshwater crustaceans, Mediterranean temporary ponds, regional biodiversity. SUMMARY Temporary ponds are the most peculiar and representative water bodies in the arid and semi-arid regions of the world, where they often represent diversity hotspots that greatly contribute to the regional biodiversity. Being indissolubly linked to these ecosystems, the so-called “large branchiopods” are unanimously considered flagship taxa of these habitats. Nonetheless, updated and detailed information on large branchiopod faunas is still missing in many countries or regions. Based on an extensive bibliographical review and field samplings, we provide an updated and commented checklist of large branchiopods in Tunisia, one of the less investigated countries of the Maghreb as far as inland water crustaceans are concerned. We carried out a field survey from 2004 to 2012, thereby collecting 262 crustacean samples from a total of 177 temporary water bodies scattered throughout the country. -
Tanymastix Stagnalis Linn. and Its Occurrence in Norway
Tanymastix stagnalis Linn. and its occurrence in Norway. BY Robert Gurney M. A. (Narfolk). In these days it is necessary to use much circumspection in refer- ring to any European species of Phyllopod, since so many changes have been made recently in their nomenclature. It is important, therefore, to make clear in the first instance to what species I am alluding and to justify its identification with the species described by Linnaeus. Now Linnaeus, in his Fauna Suecica, describes one species only of Branchipodidae under the name of Cancer stagnalis, and, in his Systema Naturae, he gives as a synonym of it Schaeffer's ,,Apus pisciformis"l). The description given is inadequate to determine by itself to what species he refers, with the exception that the colour of the egg-sac as there given is certainly not the same as in Schaeffers's species'). We have the authority of Prof. Lilljeborg that one species of Branchipod occurs commonly near Upsala and that this species is not the same as that described by Schaeffer, which is not known to occur in Sweden at all. We have therefore this dilemma; - Either Linnaeus overlooked a rather conspicuous animal which was common in his own neighbourhood and, in place of it, recorded as a member of the Swedish fauna a species which does not occur in Sweden; or he was in error in supposing that the two species described by himself and by Schaeffer were identical. Such an error as the latter is by no means unusual, whereas the first alternative seems to me incredible. -
Ecological Surveying Techniques for Protected Flora and Fauna During the Planning of National Road Schemes NRA Ecological Survey Maciek 3/19/09 11:55 AM Page Ii
NRA Ecological Survey maciek 3/19/09 11:55 AM Page i Ecological Surveying Techniques for Protected Flora and Fauna during the Planning of National Road Schemes NRA Ecological Survey maciek 3/19/09 11:55 AM Page ii Ecological Surveying Techniques for Protected Flora and Fauna during the Planning of National Road Schemes ii NRA Ecological Survey maciek 3/19/09 11:55 AM Page iii CONTENTS Chapter 1 Introduction .......................................................................................... 1 Chapter 2 Structure of the ‘Survey Guidelines’ .................................................... 2 Chapter 3 Survey considerations ........................................................................... 3 3.1 Recognising and dealing with key potential constraints/limitations 3 3.1.1 Seasonal constraints .................................................................... 3 3.1.2 Climatic conditions ...................................................................... 3 3.1.3 Inter-annual variation ................................................................. 3 3.1.4 Access limitations ........................................................................ 3 3.2 Survey effort ......................................................................................... 3 3.3 Survey standards ................................................................................... 5 3.4 Establishing baseline conditions .......................................................... 5 3.5 Monitoring ........................................................................................... -
BIODIVERSITY in IRELAND a Review of Habitats and Species
ENVIRONMENTAL PROTECTION AGENCY An Ghníomhaireacht um Chaomhnú Comhshaoil Ireland’s Environment BIODIVERSITY IN IRELAND A Review of Habitats and Species John Lucey and Yvonne Doris ENVIRONMENTAL PROTECTION AGENCY PO Box 3000, Johnstown Castle Estate, Co. Wexford, Ireland. Telephone: +353 53 60600 Fax: +353 53 60699 Email: [email protected] Website: www.epa.ie July 2001 BIODIVERSITY IN IRELAND C ONTENTS LIST OF BOXES . iii LIST OF FIGURES . iv LIST OF TABLES . iv ACKNOWLEDGEMENTS . v INTRODUCTION . 1 LEGISLATIVE FRAMEWORK . 2 HABITATS . 4 Forests and Woodland . 4 Hedgerows . 5 Fen and Bog . 6 Turloughs . 7 Freshwater Habitats . 8 Coastal and Marine Habitats . 8 SPECIES . 10 Flora (Plants) . 10 Fauna (Animals) . 15 DISCUSSION . 22 CONCLUSIONS . 29 POSTSCRIPT . 32 NOTES . 32 REFERENCES . 33 APPENDIX 1 . 38 PAGE II A REVIEW OF HABITATS & SPECIES L IST OF B OXES 1 IRISH GEOLOGICAL HERITAGE . 1 2 CONSERVATION OF NATURAL AND SEMI-NATURAL WOODLANDS . 4 3 BOGS . 6 4 TURLOUGHS . 7 5 COASTAL / MARINE HABITATS . 9 6 MAËRL COMMUNITIES . 9 7 LOWER PLANTS . 13 8 VASCULAR PLANTS . 14 9 KERRY SLUG . 15 10 FRESHWATER INVERTEBRATES . 16 11 MARSH FRITILLARY . 16 12 LAND SNAILS . 17 13 SOME RECENT INSECT AND MITE INTRODUCTIONS TO IRELAND . 17 14 FISHES . 18 15 AMPHIBIANS AND REPTILES . 19 16A GREENLAND WHITE-FRONTED GOOSE . 19 16B BIRDS . 20 17 MAMMALS . 21 18 CETACEANS . 22 19 ANIMAL EXTINCTIONS AND INTRODUCTIONS DURING THE PAST MILLENNIUM . 23 20 OVERGRAZING . 24 21 GENETIC RESOURCES . 28 22 THREATS TO BIODIVERSITY . 29 23 CLIMATE CHANGE AND BIODIVERSITY . 30 PAGE III BIODIVERSITY IN IRELAND L IST OF F IGURES 1 FRAMEWORK FOR THE DESIGNATION OF NATURA 2000 SITES . -
Checklists of Protected and Threatened Species in Ireland. Irish Wildlife Manuals, No
ISSN 1393 – 6670 N A T I O N A L P A R K S A N D W I L D L I F E S ERVICE CHECKLISTS OF PROTECTED AND THREATENED SPECIES IN IRELAND Brian Nelson, Sinéad Cummins, Loraine Fay, Rebecca Jeffrey, Seán Kelly, Naomi Kingston, Neil Lockhart, Ferdia Marnell, David Tierney and Mike Wyse Jackson I R I S H W I L D L I F E M ANUAL S 116 National Parks and Wildlife Service (NPWS) commissions a range of reports from external contractors to provide scientific evidence and advice to assist it in its duties. The Irish Wildlife Manuals series serves as a record of work carried out or commissioned by NPWS, and is one means by which it disseminates scientific information. Others include scientific publications in peer reviewed journals. The views and recommendations presented in this report are not necessarily those of NPWS and should, therefore, not be attributed to NPWS. Front cover, small photographs from top row: Coastal heath, Howth Head, Co. Dublin, Maurice Eakin; Red Squirrel Sciurus vulgaris, Eddie Dunne, NPWS Image Library; Marsh Fritillary Euphydryas aurinia, Brian Nelson; Puffin Fratercula arctica, Mike Brown, NPWS Image Library; Long Range and Upper Lake, Killarney National Park, NPWS Image Library; Limestone pavement, Bricklieve Mountains, Co. Sligo, Andy Bleasdale; Meadow Saffron Colchicum autumnale, Lorcan Scott; Barn Owl Tyto alba, Mike Brown, NPWS Image Library; A deep water fly trap anemone Phelliactis sp., Yvonne Leahy; Violet Crystalwort Riccia huebeneriana, Robert Thompson Main photograph: Short-beaked Common Dolphin Delphinus delphis, -
Checklist of the Anostraca
Hydmbwlogia 298: 315-353, 1995. D. Belk, H. J. Dumont & G. Maier (eds). Studies on Large Branchiopod Biology and Aquaculture II. 315 ©1995 Kluwer Academic Publishers. Printed in Belgium. Checklist of the Anostraca Denton Belk^ & Jan Brtek^ ^ Biology Department, Our Lady of the Lake University of San Antonio, San Antonio, TX 78207-4666, USA ^Hornonitrianske Muzeum, Hlinkova 44, Prievidza 971 01, Slovakia Key words: Anostraca, checklist, distribution, nomenclature, nomina dubia, nomina nuda, types, type locality Abstract In this checklist, we number the named anostracan fauna of the world at 258 species and seven subspecies organized in 21 genera. The list contains all species described through 31 December 1993, and those new species names made available in previous pages of this volume. The most species rich genus is Streptocephalus with 58 described species level taxa. Chirocephalus with 43, Branchinecta 35, and Branchinella 33 occupy the next three places. With the exception of Branchipodopsis and Eubranchipus each having 16 species, all the other genera include less than 10 species each. The need for zoogeographic study of these animals is demonstrated by the fact that almost 25% of the named taxa are known only from their type localities. Introduction requirements of the International Code of Zoological Nomenclature for availability as species names. We present a complete listing of species in the crus This checklist recognizes 258 species and seven tacean order Anostraca as of 31 December 1993, and subspecies arranged in 21 genera; however, its authors those described in the preceding pages of this sympo disagree on the number of valid genera. The check sium volume.