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Fucosylated Chondroitin Sulfates from the Sea Cucumbers Paracaudina Chilensis and Holothuria Hilla: Structures and Anticoagulant Activity
marine drugs Article Fucosylated Chondroitin Sulfates from the Sea Cucumbers Paracaudina chilensis and Holothuria hilla: Structures and Anticoagulant Activity Nadezhda E. Ustyuzhanina 1,*, Maria I. Bilan 1, Andrey S. Dmitrenok 1 , Alexandra S. Silchenko 2, Boris B. Grebnev 2, Valentin A. Stonik 2, Nikolay E. Nifantiev 1 and Anatolii I. Usov 1,* 1 N.D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prospect 47, 119991 Moscow, Russia; [email protected] (M.I.B.); [email protected] (A.S.D.); [email protected] (N.E.N.) 2 G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Prospect 100 let Vladivostoku 159, 690022 Vladivostok, Russia; [email protected] (A.S.S.); [email protected] (B.B.G.); [email protected] (V.A.S.) * Correspondence: [email protected] (N.E.U.); [email protected] (A.I.U.); Tel.: +7-495-135-8784 (N.E.U.) Received: 29 September 2020; Accepted: 26 October 2020; Published: 28 October 2020 Abstract: Fucosylated chondroitin sulfates (FCSs) PC and HH were isolated from the sea cucumbers Paracaudina chilensis and Holothuria hilla, respectively. The purification of the polysaccharides was carried out by anion-exchange chromatography on a DEAE-Sephacel column. The structural characterization of the polysaccharides was performed in terms of monosaccharide and sulfate content, as well as using a series of nondestructive NMR spectroscopic methods. Both polysaccharides were shown to contain a chondroitin core [ 3)-β-d-GalNAc (N-acethyl galactosamine)-(1 4)-β-d-GlcA ! ! (glucuronic acid)-(1 ]n, bearing sulfated fucosyl branches at O-3 of every GlcA residue in the ! chain. -
Petition to List the Black Teatfish, Holothuria Nobilis, Under the U.S. Endangered Species Act
Before the Secretary of Commerce Petition to List the Black Teatfish, Holothuria nobilis, under the U.S. Endangered Species Act Photo Credit: © Philippe Bourjon (with permission) Center for Biological Diversity 14 May 2020 Notice of Petition Wilbur Ross, Secretary of Commerce U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected], [email protected] Dr. Neil Jacobs, Acting Under Secretary of Commerce for Oceans and Atmosphere U.S. Department of Commerce 1401 Constitution Ave. NW Washington, D.C. 20230 Email: [email protected] Petitioner: Kristin Carden, Oceans Program Scientist Sarah Uhlemann, Senior Att’y & Int’l Program Director Center for Biological Diversity Center for Biological Diversity 1212 Broadway #800 2400 NW 80th Street, #146 Oakland, CA 94612 Seattle,WA98117 Phone: (510) 844‐7100 x327 Phone: (206) 324‐2344 Email: [email protected] Email: [email protected] The Center for Biological Diversity (Center, Petitioner) submits to the Secretary of Commerce and the National Oceanographic and Atmospheric Administration (NOAA) through the National Marine Fisheries Service (NMFS) a petition to list the black teatfish, Holothuria nobilis, as threatened or endangered under the U.S. Endangered Species Act (ESA), 16 U.S.C. § 1531 et seq. Alternatively, the Service should list the black teatfish as threatened or endangered throughout a significant portion of its range. This species is found exclusively in foreign waters, thus 30‐days’ notice to affected U.S. states and/or territories was not required. The Center is a non‐profit, public interest environmental organization dedicated to the protection of native species and their habitats. -
Sea Cucumbers
Guide to Species 49 SEA CUCUMBERS The sea cucumber fishery is an importantHoloturia source scabra of livelihood to many households in the coast of KenyaStichopus (Conand ethermani al., 2006), althoughHoloturia they nobilis. are not eaten by local people. There are several commercially important sea cucumber species in Kenya. In the southern coast, is the most commonly landed species, followed by and Sea cucumber catches have significantly decreased over the years. Some low-value species are increasingly getting important to fishers’ catches to make up for the decrease in the size and quantities of high value species. TECHNICAL TERMS AND MEASUREMENTS dorsal podia mouth lateral radius of (papillae) bivium Inter-radiae anus lateral radius of tentacles trivium podia or ventral median radius of ambulacra trivium Sea cucumbers have an orally-aborally elongated body. The body is formed like a short or long cylinder, with the mouth (at the anterior end) encircled by tentacles, and the anus (at the posterior end) often edged by papillae. The pentamerous symmetry is sometimes recognizable by the presence of 5 meridional ambulacra bearing podia. Sea cucumbers often lay on the substrate with their ventral surface or trivium, formed by the radii A, B, and E in the Carpenter system for orientation. This creeping sole bears the locomotory podia, while on the dorsal surface, or bivium, the podia are often represented by papillae. Consequently, a secondary bilateral symmetry is evident. The mouth is terminal or displaced dorsally, surrounded by a thin buccal membrane, and generally bordered by a circle of tentacles. 50 - Holothuriidae HOLOTHURIIDAE Sea Cucumbers Sea cucumbers§ Actinopyga mauritiana FAO names: § § Surf redfish (En) Local name(s): N: § (Quoy & Graimard, 1833) Holothurie brune des brisants (Fr) Habitat: Jongoo; S: Jongoo (M/K). -
Holothuriidae 1165
click for previous page Order Aspidochirotida - Holothuriidae 1165 Order Aspidochirotida - Holothuriidae HOLOTHURIIDAE iagnostic characters: Body dome-shaped in cross-section, with trivium (or sole) usually flattened Dand dorsal bivium convex and covered with papillae. Gonads forming a single tuft appended to the left dorsal mesentery. Tentacular ampullae present, long, and slender. Cuvierian organs present or absent. Dominant spicules in form of tables, buttons (simple or modified), and rods (excluding C-and S-shaped rods). Key to the genera and subgenera of Holothuriidae occurring in the area (after Clark and Rowe, 1971) 1a. Body wall very thick; podia and papillae short, more or less regularly arranged on bivium and trivium; spicules in form of rods, ovules, rosettes, but never as tables or buttons ......→ 2 1b. Body wall thin to thick; podia irregularly arranged on the bivium and scattered papillae on the trivium; spicules in various forms, with tables and/or buttons present ...(Holothuria) → 4 2a. Tentacles 20 to 30; podia ventral, irregularly arranged on the interradii or more regularly on the radii; 5 calcified anal teeth around anus; spicules in form of spinose rods and rosettes ...........................................Actinopyga 2b. Tentacles 20 to 25; podia ventral, usually irregularly arranged, rarely on the radii; no calcified anal teeth around anus, occasionally 5 groups of papillae; spicules in form of spinose and/or branched rods and rosettes ............................→ 3 3a. Podia on bivium arranged in 3 rows; spicules comprise rocket-shaped forms ....Pearsonothuria 3b. Podia on bivium not arranged in 3 rows; spicules not comprising rocket-shaped forms . Bohadschia 4a. Spicules in form of well-developed tables, rods and perforated plates, never as buttons .....→ 5 4b. -
SPC Beche-De-Mer Information Bulletin #39 – March 2019
ISSN 1025-4943 Issue 39 – March 2019 BECHE-DE-MER information bulletin v Inside this issue Editorial Towards producing a standard grade identification guide for bêche-de-mer in This issue of the Beche-de-mer Information Bulletin is well supplied with Solomon Islands 15 articles that address various aspects of the biology, fisheries and S. Lee et al. p. 3 aquaculture of sea cucumbers from three major oceans. An assessment of commercial sea cu- cumber populations in French Polynesia Lee and colleagues propose a procedure for writing guidelines for just after the 2012 moratorium the standard identification of beche-de-mer in Solomon Islands. S. Andréfouët et al. p. 8 Andréfouët and colleagues assess commercial sea cucumber Size at sexual maturity of the flower populations in French Polynesia and discuss several recommendations teatfish Holothuria (Microthele) sp. in the specific to the different archipelagos and islands, in the view of new Seychelles management decisions. Cahuzac and others studied the reproductive S. Cahuzac et al. p. 19 biology of Holothuria species on the Mahé and Amirantes plateaux Contribution to the knowledge of holo- in the Seychelles during the 2018 northwest monsoon season. thurian biodiversity at Reunion Island: Two previously unrecorded dendrochi- Bourjon and Quod provide a new contribution to the knowledge of rotid sea cucumbers species (Echinoder- holothurian biodiversity on La Réunion, with observations on two mata: Holothuroidea). species that are previously undescribed. Eeckhaut and colleagues P. Bourjon and J.-P. Quod p. 27 show that skin ulcerations of sea cucumbers in Madagascar are one Skin ulcerations in Holothuria scabra can symptom of different diseases induced by various abiotic or biotic be induced by various types of food agents. -
Predator Defense Mechanisms in Shallow Water Sea Cucumbers (Holothuroidea)
PREDATOR DEFENSE MECHANISMS IN SHALLOW WATER SEA CUCUMBERS (HOLOTHUROIDEA) JESSICA A. CASTILLO Environmental Science Policy and Management, University of California, Berkeley, California 94720 USA Abstract. The various predator defense mechanisms possessed by shallow water sea cucumbers were surveyed in twelve different species and morphs. While many defense mechanisms such as the presence of Cuverian tubules, toxic secretions, and unpalatability have been identified in holothurians, I hypothesized that the possession of these traits as well as the degree to which they are utilized varies from species to species. The observed defense mechanisms were compared against a previously-derived phylogeny of the sea cucumbers of Moorea. Furthermore, I hypothesized that while the presence of such structures is most likely a result of the species’ placement on a phylogenetic tree, the degree to which they utilize such structures and their physical behavior are influenced by their individual ecologies. The presence of a red liquid secretion was restricted to individuals of the genus Holothuria (Linnaeus 1767) however not all members of the genus exhibited this trait. With the exception of H. leucospilota, which possessed both Cuverian tubules and a red secretion, Cuverian tubules were observed in members of the genus Bohadschia (Ostergren 1896). In accordance with the hypothesis, both the phylogenetics and individual ecology appear to influence predator defense mechanisms. However, even closely related species of similar ecology may differ considerably. Key words: holothurians; defense; toxicity; Cuverian tubules; Moorea, French Polynesia INTRODUCTION (Sakthivel et. Al, 1994). Approximately 20 species in two families and five genera, Sea cucumbers belong to the phylum including Holothuria, Bohadschia, and Thenelota, Echinodermata and the class Holothuroidea. -
Review, the (Medical) Benefits and Disadvantage of Sea Cucumber
IOSR Journal of Pharmacy and Biological Sciences (IOSR-JPBS) e-ISSN:2278-3008, p-ISSN:2319-7676. Volume 12, Issue 5 Ver. III (Sep. – Oct. 2017), PP 30-36 www.iosrjournals.org Review, The (medical) benefits and disadvantage of sea cucumber Leonie Sophia van den Hoek, 1) Emad K. Bayoumi 2). 1 Department of Marine Biology Science, Liberty International University, Wilmington, USA. Professional Member Marine Biological Association, UK. 2 Department of General Surgery, Medical Academy Named after S. I. Georgiesky of Crimea Federal University, Crimea, Russia Corresponding Author: Leonie Sophia van den Hoek Abstract: A remarkable feature of Holothurians is the catch collagen that forms their body wall. Catch collagen has two states, soft and stiff, that are under neurological control [1]. A study [3] provides evidence that the process of new organ formation in holothurians can be described as an intermediate process showing characteristics of both epimorphic and morphallactic phenomena. Tropical sea cucumbers, have a previously unappreciated role in the support of ecosystem resilience in the face of global change, it is an important consideration with respect to the bêche-de-mer trade to ensure sea cucumber populations are sustained in a future ocean [9]. Medical benefits of the sea cucumber are; Losing weight [19], decreasing cholesterol [10], improved calcium solubility under simulated gastrointestinal digestion and also promoted calcium absorption in Caco-2 and HT-29 cells [20], reducing arthritis pain [21], HIV therapy [21], treatment osteoarthritis [21], antifungal steroid glycoside [22], collagen protein [14], alternative to mammalian collagen [14], alternative for blood thinners [29], enhancing immunity and disease resistance [30]. -
The Sea Cucumber Holothuria (Halodeima) Atra (Jager, 1833), In
The Sea Cucumber Holothuria (Halodeima) atra (Jager, 1833), in South Tarawa Lagoon (Republic of Kiribati): Environmental Variability, Population Biology and Fishing Pressure. Teatim Tamaroa A thesis submitted as partial fulfilment for the degree of Master of Science in Marine Biology 2010 Abstract Holothuria atra or lollyfish is the most common sea cucumber in the Pacific and Indian Oceans. The current status of Holothria atra at 13 sites of South Tarawa lagoon (Republic of Kiribati) was established by using biological surveys and fishers‟ questionnaires. A preliminary investigation was conducted in order to assess how and why environmental variability and fishing pressure have affected the spatial and temporal distribution, mean abundant and mean size of this species at the sites. The 13 sites were selected randomly, and marked with a GPS on the map of South Tarawa. Sedimentary characteristics were determined for each site, and a qualitative assessment of sites health was made. Lollyfish length, biomass and abundance and transect density were calculated for each site. The weight of organic matter content and size of sediment sample were determined. Data were analysed using Kruskal- Walis (KW) and Repeated measures (RM) ANOVA tests. This thesis shows that the environmental variability could not offer reasons as to why the biological data of lollyfish varied from one site to another. However, other factors that were tested may explain the variation in biological data. Fishing pressure is one of those parameters that can regulate the lollyfish distribution and density and responses from local fishers indicate that fishing pressure is high and that the lollyfish resource is under considerable harvest pressure. -
Sphingolipids of Asteroidea and Holothuroidea: Structures and Biological Activities
marine drugs Review Sphingolipids of Asteroidea and Holothuroidea: Structures and Biological Activities Timofey V. Malyarenko 1,2,*, Alla A. Kicha 1, Valentin A. Stonik 1,2 and Natalia V. Ivanchina 1,* 1 G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch of the Russian Academy of Sciences, Pr. 100-let Vladivostoku 159, 690022 Vladivostok, Russia; [email protected] (A.A.K.); [email protected] (V.A.S.) 2 Department of Bioorganic Chemistry and Biotechnology, School of Natural Sciences, Far Eastern Federal University, Sukhanova Str. 8, 690000 Vladivostok, Russia * Correspondence: [email protected] (T.V.M.); [email protected] (N.V.I.); Tel.: +7-423-2312-360 (T.V.M.); Fax: +7-423-2314-050 (T.V.M.) Abstract: Sphingolipids are complex lipids widespread in nature as structural components of biomembranes. Commonly, the sphingolipids of marine organisms differ from those of terres- trial animals and plants. The gangliosides are the most complex sphingolipids characteristic of vertebrates that have been found in only the Echinodermata (echinoderms) phylum of invertebrates. Sphingolipids of the representatives of the Asteroidea and Holothuroidea classes are the most studied among all echinoderms. In this review, we have summarized the data on sphingolipids of these two classes of marine invertebrates over the past two decades. Recently established structures, properties, and peculiarities of biogenesis of ceramides, cerebrosides, and gangliosides from starfishes and holothurians are discussed. The purpose of this review is to provide the most complete informa- tion on the chemical structures, structural features, and biological activities of sphingolipids of the Asteroidea and Holothuroidea classes. -
Taxonomy of the Heavily Exploited Indo-Pacific Sandfish
Zoological Journal of the Linnean Society, 2009, 155, 40–59. With 10 figures Taxonomy of the heavily exploited Indo-Pacific sandfish complex (Echinodermata: Holothuriidae) CLAUDE MASSIN1*, SVEN UTHICKE2, STEVEN W. PURCELL3, FRANK W. E. ROWE, FLS4† and YVES SAMYN5 1Department of Invertebrates, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, 1000 Brussels, Belgium 2Australian Institute of Marine Science, PMB No 3, Townsville, Qld 4810, Australia 3The WorldFish Center, c/o SPC – Secretariat of the Pacific Community, B.P. D5, 98848 Noumea Cedex, New Caledonia 4Research Associate, Australian Museum, Sydney, NSW, 2000, Australia 5Global Taxonomy Initiative, Royal Belgian Institute of Natural Sciences, Vautierstraat 29, 1000 Brussels, Belgium Received 5 September 2007; accepted for publication 18 October 2007 Two commercially valuable holothurians, the sandfish and golden sandfish, vary in colour and have a confused taxonomy, lending uncertainty to species identifications. A recent molecular study showed that the putative variety Holothuria (Metriatyla) scabra var. versicolor Conand, 1986 (‘golden sandfish’) is a distinct species from, but could hybridize with, H. (Metriatyla) scabra Jaeger, 1833 (’sandfish’). Examination of the skeletal elements and external morphology of these species corroborates these findings. The identity of H. (M.) scabra is unambiguously defined through the erection and description of a neotype, and several synonyms have been critically re-examined. The nomenclaturally rejected taxon H. (Metriatyla) timama Lesson, 1830 and H. (M.) scabra var. versicolor (a nomen nudum) are herein recognized as conspecific and are allocated to a new species, Holothuria lessoni sp. nov., for which type specimens are described. The holotype and only known specimen of H. aculeata Semper, 1867, has been found and is redescribed. -
FTP520 Seacucumber 09.Indd
7 1. Foreword The conservation and management of sea cucumbers are of paramount importance because these animals fulfil an important role in marine ecosystems and are a significant source of income to many coastal communities worldwide (Conand, 1990; Conand and Byrne, 1994). The current grave status (see Glossary) of sea cucumber stocks in numerous countries can be attributed to three broad causes: rampant exploitation, ever-increasing market demand and inadequacy of fishery management. The unique life history traits of holothurians (e.g. low or infrequent recruitment, great longevity and density-dependent reproductive success) also make these species especially vulnerable to overfishing. The vulnerability of sea cucumber populations to local extinction and the risk of long-term loss of fishery productivity have prompted several international and regional meetings of expert scientists and fishery managers in recent years. In 2003, FAO hosted a technical workshop, “Advances in sea cucumber aquaculture and management”, and published a report with technical papers and recommendations for fishery management (Lovatelli et al., 2004). The Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) also ran a technical workshop, in 2004 in Malaysia, entitled “Conservation of sea cucumbers in the families Holothuridae and Stichopodidae”, providing scientific justification and urging for the immediate need of conservation and sustainable exploitation of sea cucumbers (Conand, 2004, 2006a, 2006b; Bruckner, 2006a). In 2006, the Australian Centre for International Agricultural Research (ACIAR) organized a workshop to produce a simple guidebook to help Pacific fishery managers to diagnose the health of their sea cucumber fisheries and develop appropriate management plans (Friedman et al., 2008a). -
Community Structure, Diversity, and Distribution Patterns of Sea Cucumber
Community structure, diversity, and distribution patterns of sea cucumber (Holothuroidea) in the coral reef area of Sapeken Islands, Sumenep Regency, Indonesia 1Abdulkadir Rahardjanto, 2Husamah, 2Samsun Hadi, 1Ainur Rofieq, 2Poncojari Wahyono 1 Biology Education, Postgraduate Directorate, Universitas Muhammadiyah Malang, Malang, East Java, Indonesia; 2 Biology Education, Faculty of Teacher Training and Education, Universitas Muhammadiyah Malang, Malang, Indonesia. Corresponding author: A. Rahardjanto, [email protected] Abstract. Sea cucumbers (Holothuroidea) are one of the high value marine products, with populations under very critical condition due to over exploitation. Data and information related to the condition of sea cucumber communities, especially in remote islands, like the Sapeken Islands, Sumenep Regency, East Java, Indonesia, is still very limited. This study aimed to determine the species, community structure (density, frequency, and important value index), species diversity index, and distribution patterns of sea cucumbers found in the reef area of Sapeken Islands, using a quantitative descriptive study. This research was conducted in low tide during the day using the quadratic transect method. Data was collected by making direct observations of the population under investigation. The results showed that sea cucumbers belonged to 11 species, from 2 orders: Aspidochirotida, with the species Holothuria hilla, Holothuria fuscopunctata, Holothuria impatiens, Holothuria leucospilota, Holothuria scabra, Stichopus horrens, Stichopus variegates, Actinopyga lecanora, and Actinopyga mauritiana and order Apodida, with the species Synapta maculata and Euapta godeffroyi. The density ranged from 0.162 to 1.37 ind m-2, and the relative density was between 0.035 and 0.292 ind m-2. The highest density was found for H. hilla and the lowest for S.