Selection for the Xmrk Oncogene in Xiphophorus Cortezi

Total Page:16

File Type:pdf, Size:1020Kb

Selection for the Xmrk Oncogene in Xiphophorus Cortezi SELECTION FOR THE XMRK ONCOGENE IN XIPHOPHORUS CORTEZI A dissertation presented to the faculty of the College of Arts and Sciences of Ohio University In partial fulfillment of the requirements for the degree Doctor of Philosophy André A. Fernandez August 2008 2 This dissertation entitled SELECTION FOR THE XMRK ONCOGENE IN XIPHOPHORUS CORTEZI by ANDRÉ A. FERNANDEZ has been approved for the Department of Biological Sciences and the College of Arts and Sciences by ___________________________________ Molly R. Morris Associate Professor of Biological Sciences ___________________________________ Benjamin M. Ogles Dean, College of Arts and Sciences 3 ABSTRACT FERNANDEZ, ANDRÉ A., Ph.D., August 2008, Biological Sciences SELECTION FOR THE XMRK ONCOGENE IN XIPHOPHORUS CORTEZI (142 pp.) Director of Dissertation: Molly R. Morris This dissertation examines sexual selection as a mechanism underlying the continued evolutionary maintenance of the Xmrk (Xiphophorus melanoma receptor kinase) cancer gene within the Xiphophorus melanoma model. Additionally, I expand this animal model to include Xiphophorus nezahualcoyotl (Order: Cyprinodontiformes, Family: Poeciliidae) as a species capable of non-hybrid melanoma formation. I use the well-studied Northern swordtail, Xiphophorus cortezi, collected from six localities throughout its geographic distribution to address whether the pigment pattern from which melanomas form (spotted caudal, Sc) and/or the Xmrk oncogene responsible for melanomas within Xiphophorus are advantageous in the acquisition of mates. Specifically, I address the following questions: 1) Is there a relationship between male aggression levels and the Sc phenotype and/or Xmrk genotype within individual males; 2) Does male aggressive response differ based upon the presence of the Sc phenotype; 3) Do females preferentially associate with Sc patterned males over non-Sc males or with larger Sc patterned males to size-matched males with smaller Sc patterns; and 4) Does the frequency of the Sc phenotype or the Xmrk genotype across the six populations influence male aggression levels or female mate choice decisions? 4 The results of mirror image trials found that the Sc macromelanophore pattern as well as the Xmrk oncogene (regardless of the presence of Sc) is correlated with increased aggression. In addition, Sc appears to function as a visual signal in male agonistic encounters because male aggressive response decreases when viewing their Sc image as compared with their non-Sc image. The frequency of Xmrk in males across populations ranged 0% to 87%. However, there was no difference in the aggression levels of males with Sc and/or Xmrk from each population thus the frequency of Xmrk within a population does not directly influence individual levels of male aggression. X. cortezi females from three populations, located in separate drainages that are genetically divergent, prefer to associate with Sc patterned males to non-Sc males. Moreover, X. cortezi females prefer males with an enhanced Sc pattern, which would occur during melanoma formation, to males with a reduced Sc pattern. However, unlike male aggression, there was variation in female preference for Sc males and it appeared to be influenced by the frequency of Xmrk in the population. Females from one population, which had the highest frequencies of Sc and Xmrk in females, discriminated against Sc patterned males and preferred to associate with non-Sc males. These results suggest there is a negative relationship between the strength of female preference for Sc and the frequency of Xmrk in females across populations. Because offspring with two copies of Xmrk have reduced fitness, and these offspring are more likely to occur in populations in which the frequency of Xmrk in females is high, females can increase their reproductive fitness by avoiding males with Sc (and therefore Xmrk) in these populations. 5 The findings of this dissertation have several important implications for the Xiphophorus melanoma model. First, non-hybrid melanomas occur in more Xiphophorus species than initially realized and may be more biologically relevant within Xiphophorus than melanomas formed via interspecific hybridization. Second, the Xmrk oncogene is associated with increased male aggression and thereby provides a competitive advantage for individuals in male-male competition. In addition, the macromelanophore patterns associated with the Xmrk oncogene can serve as signals in these male agonistic encounters. Third, female mate choice for the Xmrk associated melanin patterns plays an important role in the evolutionary maintenance of this oncogene. Finally, the relative frequency of Xmrk within each sex of a population does influence female mating decisions and is likely responsible for the continued polymorphism of Xmrk in all Xiphophorus that have retained this cancer gene. Collectively, the research presented in this dissertation demonstrates that sexual selection is important in explaining the persistence of Xmrk within this system. Approved: ____________________________________________________________ Molly R. Morris Associate Professor of Biological Sciences 6 To everyone and anyone who, over the last thirty-one years, made this document reality. 7 ACKNOWLEDGEMENTS Without question the first person I wish to acknowledge is my advisor and mentor, Dr. Molly R. Morris. The reason is simple: none of this would have happened without her giving me the opportunity to do so. Knowing what I know now about the process of graduate school (and the investment an advisor makes), I am truly amazed that she chose to take me on. I was five years removed from undergraduate education (with mediocre grades) and the only research experience I had was collecting data on primate foraging behavior in the field (I had never heard of a swordtail!). Yet, she read between the lines and believed in my potential to excel, which in turn has always led me to believe in myself. Thank you Molly. Thank you for allowing me the freedom to grow and develop as a scientist, yet always being there when I fell or needed guidance. I truly believe the latitude you give us, your students, is paramount to the success we attain. The integrative nature of this dissertation (sexual selection, evolutionary biology, and molecular biology of cancer) frequently pushed me beyond my training as a behaviorist and forced me to glean information and expertise from others with the Department of Biological Sciences at Ohio University. At the top of this list is Dr. Soichi Tanda. I am indebted to Dr. Tanda for his assistance and devotion in cracking the molecular code of this cancer gene (collectively, we ordered 53 custom primers before finally obtaining a primer set capable of screening for this cancer gene). Thank you for opening up your laboratory and imparting me with such great molecular techniques. Your optimism and humor in this endeavor proved vital in this last year. I would also like to 8 thank Dr. Matt White and Dr. Don Holzschu for numerous brainstorming sessions about this system over the last several years. I thank Dr. Joe Eastman and Dr. Bob Hikida for their willingness to help me with tissue histology and providing preservation materials. I would also like to thank Dr. Kathi Heffner (Dept. of Psychology) for taking the time to serve on my dissertation committee and discussing this project with me. Many people within the Department of Biological Sciences have helped me along the way and I would like to thank all of them. There are a few people that I must specifically mention for their persistent help. I have been fortunate enough to procure a few grants while at Ohio University and I certainly owe Linda Wise a BIG thank you for her bookkeeping of these grants accounts and her patience in ordering research supplies for this project. Susan Wagner-Svendsen thank you for constantly having a smile on your face with dealing with administration of these grants. I would like to thank Dr. Svendsen for allowing me to hole up in your space while studying for oral comprehensives and during the hours I babysat my daughter. There is also one student I wish to acknowledge, Eric McElroy. As a roommate, Eric’s intensity was infectious and I firmly believe the long days we logged during that year will be (and has been) instrumental to a successful academic career. I would like to thank everyone in the Morris laboratory for their assistance and support. I am grateful to Jason Moretz for his help with statistics early on and I wish I could have shared more time here with him. Oscar Rios-Cardenas, Carla Gutiérrez- Rodríguez, and Natalie Dubois for their tireless support and knowledge in the molecular laboratory. I want to thank Scarlett Tudor and Donelle Robinson for listening to my 9 oncogene ramblings in our office and for their efforts in collecting many of the fish in this dissertation. I would also like to thank the following undergraduates for their assistant in collecting data for this dissertation: Hiro Tanda, Katie Meadows, Lauren Toth, Jennifer Merzweiler, and Paul Crites. Throughout my tenure at Ohio University, my family has sacrificed spending time with me as my studies progressed. For me, as this immersion took place, the separation became easier and easier. This was not the case for them. Because the enticements of scientific investigations are unfamiliar to them, my persistent absences came with more and more bewilderment. I would like to thank all of them for saying they understand when I know they really didn’t. In my mind, such support is the definition of family. Saving the best for last, I am grateful for my wife and child, Lorie and Sadie Kathleen. Lorie, your unconditional patience, love, and support in this process has been inspirational. The up and downs we have witnessed, both professionally and personally, have been relentless. There is no greater shoulder to cry on or face to smile at than yours. I love you. Sadie thanks for being an excellent lab assistant. This research was funded by a National Institutes of Health NRSA pre-doctoral fellowship to A.
Recommended publications
  • Alien Freshwater Fish, Xiphophorus Interspecies Hybrid (Poeciliidae) Found in Artificial Lake in Warsaw, Central Poland
    Available online at www.worldscientificnews.com WSN 132 (2019) 291-299 EISSN 2392-2192 SHORT COMMUNICATION Alien freshwater fish, Xiphophorus interspecies hybrid (Poeciliidae) found in artificial lake in Warsaw, Central Poland Rafał Maciaszek1,*, Dorota Marcinek2, Maria Eberhardt3, Sylwia Wilk4 1 Department of Genetics and Animal Breeding, Faculty of Animal Sciences, Warsaw University of Life Sciences, ul. Ciszewskiego 8, 02-786 Warsaw, Poland 2 Faculty of Animal Sciences, Warsaw University of Life Sciences, ul. Ciszewskiego 8, 02-786 Warsaw, Poland 3 Faculty of Veterinary Medicine, Warsaw University of Life Sciences, ul. Ciszewskiego 8, 02-786 Warsaw, Poland 4 Veterinary Clinic “Lavia-Vet”, Jasionka 926, 36-002, Jasionka, Poland *E-mail address: [email protected] ABSTRACT This paper describes an introduction of aquarium ornamental fish, Xiphophorus interspecies hybrid (Poeciliidae) in an artificial water reservoir in Pole Mokotowskie park complex in Warsaw, Poland. Caught individuals have been identified, described and presented in photographs. Measurements of selected physicochemical parameters of water were made and perspectives for the studied population were evaluated. The finding is discussed with available literature describing introductions of alien species with aquaristical origin in Polish waters. Keywords: aquarium, invasive species, ornamental pet, green swordtail, southern platyfish, variatus platy, stone maroko, Pole Mokotowskie park complex, Xiphophorus ( Received 14 July 2019; Accepted 27 July 2019; Date of Publication 29 July 2019 ) World Scientific News 132 (2019) 291-299 1. INTRODUCTION The fish kept in aquariums and home ponds are often introduced to new environment accidentaly or intentionaly by irresponsible owners. Some species of these ornamental animals are characterized by high expansiveness and tolerance to water pollution, which in the case of their release in a new area may result in local ichthyofauna biodiversity decline.
    [Show full text]
  • Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
    Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................
    [Show full text]
  • An Assessment of Exotic Species in the Tonle Sap Biosphere Reserve
    AN ASSESSMENT OF EXOTIC SPECIES IN THE TONLE SAP BIOSPHERE RESERVE AND ASSOCIATED THREATS TO BIODIVERSITY A RESOURCE DOCUMENT FOR THE MANAGEMENT OF INVASIVE ALIEN SPECIES December 2006 Robert van Zalinge (compiler) This publication is a technical output of the UNDP/GEF-funded Tonle Sap Conservation Project Executive Summary Introduction This report is mainly a literature review. It attempts to put together all the available information from recent biological surveys, and environmental and resource use studies in the Tonle Sap Biosphere Reserve (TSBR) in order to assess the status of exotic species and report any information on their abundance, distribution and impact. For those exotic species found in the TSBR, it is examined whether they can be termed as being an invasive alien species (IAS). IAS are exotic species that pose a threat to native ecosystems, economies and/or human health. It is widely believed that IAS are the second most significant threat to biodiversity worldwide, following habitat destruction. In recognition of the threat posed by IAS the Convention on Biological Diversity puts forward the following strategy to all parties in Article 8h: “each contracting party shall as far as possible and as appropriate: prevent the introduction of, control, or eradicate those alien species which threaten ecosystems, habitats or species”. The National Assembly of Cambodia ratified the Convention on Biological Diversity in 1995. After reviewing the status of exotic species in the Tonle Sap from the literature, as well as the results from a survey based on questionnaires distributed among local communities, the main issues are discussed, possible strategies to combat the spread of alien species that are potentially invasive are examined, and recommendations are made to facilitate the implementation of a strategy towards reducing the impact of these species on the TSBR ecosystem.
    [Show full text]
  • The Phylogenetic Distribution of a Female Preference
    University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications in the Biological Sciences Papers in the Biological Sciences 1996 The Phylogenetic Distribution of a Female Preference Alexandra Basolo University of Nebraska - Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/bioscifacpub Part of the Life Sciences Commons Basolo, Alexandra, "The Phylogenetic Distribution of a Female Preference" (1996). Faculty Publications in the Biological Sciences. 45. https://digitalcommons.unl.edu/bioscifacpub/45 This Article is brought to you for free and open access by the Papers in the Biological Sciences at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications in the Biological Sciences by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Syst. Biol. 45(3):290-307, 1996 THE PHYLOGENETIC DISTRIBUTION OF A FEMALE PREFERENCE ALEXANDRA L. BASOLO Nebraska Behavioral Biobgy Group, University of Nebraska, Lincoln, Nebraska 68510, USA; E-mail: [email protected] Abstract.—Robust phylogenetic information can be instrumental to the study of the evolution of female mating preferences and preferred male traits. In this paper, the evolution of a preexisting female bias favoring a sword in male swordtail fish and the evolution of the sword, a complex character, are used to demonstrate how the evolution of mating preferences and preferred traits can be examined in a phylogenetic context. Phylogenetic information suggests that a preference for a sword arose prior to the evolution of the sword in the genus Xiphophorus and that the sword was adaptive at its origin. A phylogenetic approach to the study of female preferences and male traits can also be informative when used in conjunction with mate choice theory in making predictions about evolutionary changes in an initial bias, both prior to the appearance of the male trait it favors and subsequent to the appearance of the trait.
    [Show full text]
  • 3.2 Biological Resources
    3.2 Biological Resources 3.2.1 Introduction and Summary This section presents the environmental setting and potential impacts to biological resources associated with the Proposed Project and alternatives. It also presents mitigation measures for potential impacts to biological resources. Each discussion is arranged, according to four geographic subregions, and addresses biological resources associated with habitat types in each geographic subregion: LCR, IID water service area and AAC, Salton Sea, and SDCWA service area. Table 3.2-1 summarizes the impacts to biological resources that could result from implementation of the Proposed Project or alternatives. TABLE 3.2-1 Summary of Impacts to Biological Resources Proposed Project: Alternative 1: Alternative 2: Alternative 3: Alternative 4: 300 KAFY No Project 130 KAFY 230 KAFY 300 KAFY All Conservation On-farm Irrigation All Conservation Fallowing Only Measures System Measures Improvements Only Lower Colorado River BR–1: Reduced Continuation of A2-BR–1: Reduced A3-BR–1: Reduced Same as BR-1. flow levels in the Baseline conditions. flow levels in the flow levels in the LCR could reduce LCR could reduce LCR could reduce the acreage of the acreage of the acreage of cottonwood-willow cottonwood-willow cottonwood-willow communities: Less communities: Less communities: Less than significant than significant than significant impact with impact with impact. implementation of implementation of biological biological conservation conservation measures. measures. BR–2: Reduced Continuation of A2-BR–2: Reduced A3-BR–2: Reduced Same as BR-2. flow levels in the Baseline conditions. flow levels in the flow levels in the LCR could reduce LCR could reduce LCR could reduce the acreage of the acreage of the acreage of honey mesquite honey mesquite honey mesquite bosque bosque bosque communities: Less communities: Less communities: Less than significant than significant than significant impact.
    [Show full text]
  • Florida State Museum
    BULLETIN OF THE FLORIDA STATE MUSEUM BIOLOGICAL SCIENCES Volume 5 Number 4 MIDDLE-AMERICAN POECILIID FISHES OF THE GENUS XIPHOPHORUS Donn Eric Rosen fR \/853 UNIVERSITY OF FLORIDA Gainesville 1960 The numbers of THE BULLETIN OF THE FLORIDA STATE MUSEUM, BIOLOGICAL SCIENCES, are published at irregular intervals. Volumes contain about 300 pages and are not necessarily completed in any one calendar year. OLIVER L. AUSTIN, JR., Editor WILLIAM J. RIEMER, Managing Editor All communications concerning purchase or exchange of the publication should be addressed to the Curator of Biological Sciences, Florida State Museum, Seagle Building, Gainesville, Florida. Manuscripts should be sent to the Editor of the B ULLETIN, Flint Hall, University of Florida, Gainesville, Florida. Published 14 June 1960 Price for this issue $2.80 MIDDLE-AMERICAN POECILIID FISHES OF THE GENUS XIPHOPHORUS DONN ERIC ROSEN 1 SYNOPSiS. Drawing upon information from the present studies of the com« parative and functional morphology, distribution, and ecology of the forms of Xiphophorus (Cyprinodontiformes: R6eciliidae) and those made during the last ' quarter of a century on their. genetics, cytology, embryology, endocrinology, and ethology, the species are classified and arranged to indicate their probable phylo- genetic relationships. Their evolution and zoogeography are considered in rela- tion to a proposed center of adaptive radiation -on Mexico's Atlantic coastal plain. Five new forms are, described: X. varidtus evelynae, new subspecies; X, milleri, new specie-s; X. montezumae cortezi, new subspecies; X. pygmaeus 'nigrensis, new ' subspecies; X. heHeri aluarezi, new subspecies. To the memory of MYR6N GORDON, 1899-1959 for his quarter century of contributibns- to the biology of this and other groups of fishes.
    [Show full text]
  • The Endangered White Sands Pupfish (Cyprinodon Tularosa)
    The Endangered White Sands pupfish (Cyprinodon tularosa) genome reveals low diversity and heterogenous patterns of differentiation Andrew Black1, Janna Willoughby2, Anna Br¨uniche-Olsen3, Brian Pierce4, and Andrew DeWoody1 1Purdue University 2Auburn University 3University of Copenhagen 4Texas A and M University College Station November 24, 2020 Abstract The White Sands pupfish (Cyprinodon tularosa), endemic to New Mexico in Southwestern North America, is of conservation concern due in part to invasive species, chemical pollution, and groundwater withdrawal. Herein, we developed a high quality draft reference genome and use it to provide biological insights into the evolution and conservation of C. tularosa. Specifically, we localized microsatellite markers previously used to demarcate Evolutionary Significant Units, evaluated the possibility of introgression into the C. tularosa genome, and compared genomic diversity among related species. The de novo assembly of PacBio Sequel II error-corrected reads resulted in a 1.08Gb draft genome with a contig N50 of 1.4Mb and 25,260 annotated protein coding genes, including 95% of the expected Actinopterigii conserved orthologs. Many of the previously described C. tularosa microsatellite markers fell within or near genes and exhibited a pattern of increased heterozygosity near genic areas compared to those in intergenic regions. Genetic distances between C. tularosa and the widespread invasive species C. variegatus, which diverged ~1.6-4.7 MYA, were 0.027 (nuclear) and 0.022 (mitochondrial). Nuclear alignments revealed putative tracts of introgression that merit further investigation. Genome-wide heterozygosity was markedly lower in C. tularosa compared to estimates from related species, likely because of smaller long-term effective population sizes constrained by their isolated and limited habitat.
    [Show full text]
  • Genetic Linkage and Color Polymorphism in the Southern Platyfish (Xiphophorus Maculatus): a Model System for Studies of Color Pattern Evolution
    ZEBRAFISH Volume 3, Number 1, 2006 © Mary Ann Liebert, Inc. Genetic Linkage and Color Polymorphism in the Southern Platyfish (Xiphophorus maculatus): A Model System for Studies of Color Pattern Evolution ALEXANDRA L. BASOLO ABSTRACT Color pattern polymorphisms are widespread in animals, and are found within populations, among populations, and among species. The southern platyfish, Xiphophorus maculatus, represents one of the most extreme examples of color pattern polymorphism. Extensive research with this model system for melanoma formation has resulted in an understanding of the underlying genetic basis of over 40 sex-linked and autosomal color patterns, includ- ing alleles that code for melanin, pterin, and carotenoid coloration. Research has also found that genes that affect sex determination, timing of sexual maturation, and coloration are genetically linked on the sex chromosomes. In many animals, color patterns often show strong sexual dimorphism, with conspicuous coloration limited to males. Although some of the color pattern alleles are sex-limited in platyfish, many are expressed by both sexes. Despite the abundance of work on this model system, little is known about the evolutionary processes responsible for this diversity of color pattern alleles. This review discusses what is known about platyfish coloration, and the roles that genetic linkage and variation in environmental conditions within and among populations might play in the evolution and maintenance of the extreme color pattern polymorphism exhibited by this platyfish. INTRODUCTION have favored the evolution of black vertical bars in males of the high-backed pygmy sword- XTENSIVE COLOR PATTERN DIVERSITY exists in tail, X. multilineatus.5 Ethe animal world, with variation both within Traits that increase an individual’s attrac- and among species.
    [Show full text]
  • The Great Basin Naturalist
    STATUS OF INTRODUCED FISHES IN CERTAIN SPRING SYSTEMS IN SOUTHERN NEVADA Walter R. Courtenay, Jr.," and James E. Deacon^ .Abstract.— We record eight species of exotic fishes as established, reproducing populations in certain springs in Clark, Lincoln, and Nye counties. Nevada. These include an unidentified species of Hi/postomus, Cyprinus carpio, Poecilia mexicana. Poecilia reticulata, a Xiphophorus hybrid, and Cichlasoma nigrofasciatiim. Tilapia mariae, estab- lished in a spring near the Overton Arm of Lake Mead, and Tilapia zilli, established in a golf course pond in Pah- rump Valley, are recorded for the first time from Nevada waters. Though populations of transplanted Gambusia af- finis persist, other populations of Poecilia latipinna are apparently no longer extant. Cichlasoma severum, Notemigomis crysoleucas, Poecilia latipinna, and Carassius auratus were apparently eradicated from Rogers Spring in 1963. Miller and Alcorn (1943), Miller (1961), La of Deacon et al. (1964) and Hubbs and Dea- Rivers (1962), Deacon et al. (1964), Hubbs con (1964). and Deacon (1964), Minckley and Deacon (1968), Minckley (1973), Hubbs et al. (1974), Clark County Deacon (1979), Hardy (1980), and others re- corded the presence of non-native fishes in Indian Spring is 2 km south of U.S. High- Nevada. In those papers, it was stressed that way 95, approximately 62 km northwest of the introduction of nonnative fishes, be they Las Vegas in the village of Indian Springs. exotic (of foreign origin) or transplants native Minckley (1973) recorded a suckermouth cat- to otlier areas of the United States, can have fish {Hypostomiis) as successfully established serious, adverse impacts on the depauperate since at least 1966 "in a warm spring in and often highly endemic fish fauna in the southern Nevada"; this reference was to In- southwestern U.S.
    [Show full text]
  • Annotated Checklist of the Fish Species (Pisces) of La Réunion, Including a Red List of Threatened and Declining Species
    Stuttgarter Beiträge zur Naturkunde A, Neue Serie 2: 1–168; Stuttgart, 30.IV.2009. 1 Annotated checklist of the fish species (Pisces) of La Réunion, including a Red List of threatened and declining species RONALD FR ICKE , THIE rr Y MULOCHAU , PA tr ICK DU R VILLE , PASCALE CHABANE T , Emm ANUEL TESSIE R & YVES LE T OU R NEU R Abstract An annotated checklist of the fish species of La Réunion (southwestern Indian Ocean) comprises a total of 984 species in 164 families (including 16 species which are not native). 65 species (plus 16 introduced) occur in fresh- water, with the Gobiidae as the largest freshwater fish family. 165 species (plus 16 introduced) live in transitional waters. In marine habitats, 965 species (plus two introduced) are found, with the Labridae, Serranidae and Gobiidae being the largest families; 56.7 % of these species live in shallow coral reefs, 33.7 % inside the fringing reef, 28.0 % in shallow rocky reefs, 16.8 % on sand bottoms, 14.0 % in deep reefs, 11.9 % on the reef flat, and 11.1 % in estuaries. 63 species are first records for Réunion. Zoogeographically, 65 % of the fish fauna have a widespread Indo-Pacific distribution, while only 2.6 % are Mascarene endemics, and 0.7 % Réunion endemics. The classification of the following species is changed in the present paper: Anguilla labiata (Peters, 1852) [pre- viously A. bengalensis labiata]; Microphis millepunctatus (Kaup, 1856) [previously M. brachyurus millepunctatus]; Epinephelus oceanicus (Lacepède, 1802) [previously E. fasciatus (non Forsskål in Niebuhr, 1775)]; Ostorhinchus fasciatus (White, 1790) [previously Apogon fasciatus]; Mulloidichthys auriflamma (Forsskål in Niebuhr, 1775) [previously Mulloidichthys vanicolensis (non Valenciennes in Cuvier & Valenciennes, 1831)]; Stegastes luteobrun- neus (Smith, 1960) [previously S.
    [Show full text]
  • Conservation of Freshwater Live-Bearing Fishes: Development
    Louisiana State University LSU Digital Commons LSU Doctoral Dissertations Graduate School 7-6-2018 Conservation of Freshwater Live-bearing Fishes: Development of Germplasm Repositories for Goodeids Yue Liu Louisiana State University and Agricultural and Mechanical College, [email protected] Follow this and additional works at: https://digitalcommons.lsu.edu/gradschool_dissertations Part of the Aquaculture and Fisheries Commons, Biotechnology Commons, and the Cell Biology Commons Recommended Citation Liu, Yue, "Conservation of Freshwater Live-bearing Fishes: Development of Germplasm Repositories for Goodeids" (2018). LSU Doctoral Dissertations. 4675. https://digitalcommons.lsu.edu/gradschool_dissertations/4675 This Dissertation is brought to you for free and open access by the Graduate School at LSU Digital Commons. It has been accepted for inclusion in LSU Doctoral Dissertations by an authorized graduate school editor of LSU Digital Commons. For more information, please [email protected]. CONSERVATION OF FRESHWATER LIVE-BEARING FISHES: DEVELOPMENT OF GERMPLASM REPOSITORIES FOR GOODEIDS A Dissertation Submitted to the Graduate Faculty of the Louisiana State University and Agricultural and Mechanical College in partial fulfillment of the requirements for the degree of Doctor of Philosophy in The School of Renewable Natural Resources by Yue Liu B.S., Jiujiang University, 2010 M.Agric., Shanghai Ocean University, 2013 August 2018 For my maternal grandparents, Wenzhi Zhang and Xianrang Zhang, who raised me up in my childhood For my parents, who support me with all their love For Youjin and Jenna, who are the meaning of my life ii Acknowledgments I want to thank my advisor Dr. Terrence Tiersch, who has been the most important person in my PhD study.
    [Show full text]
  • Drainage Basin Checklists and Dichotomous Keys for Inland Fishes of Texas
    A peer-reviewed open-access journal ZooKeys 874: 31–45Drainage (2019) basin checklists and dichotomous keys for inland fishes of Texas 31 doi: 10.3897/zookeys.874.35618 CHECKLIST http://zookeys.pensoft.net Launched to accelerate biodiversity research Drainage basin checklists and dichotomous keys for inland fishes of Texas Cody Andrew Craig1, Timothy Hallman Bonner1 1 Department of Biology/Aquatic Station, Texas State University, San Marcos, Texas 78666, USA Corresponding author: Cody A. Craig ([email protected]) Academic editor: Kyle Piller | Received 22 April 2019 | Accepted 23 July 2019 | Published 2 September 2019 http://zoobank.org/B4110086-4AF6-4E76-BDAC-EA710AF766E6 Citation: Craig CA, Bonner TH (2019) Drainage basin checklists and dichotomous keys for inland fishes of Texas. ZooKeys 874: 31–45. https://doi.org/10.3897/zookeys.874.35618 Abstract Species checklists and dichotomous keys are valuable tools that provide many services for ecological stud- ies and management through tracking native and non-native species through time. We developed nine drainage basin checklists and dichotomous keys for 196 inland fishes of Texas, consisting of 171 native fishes and 25 non-native fishes. Our checklists were updated from previous checklists and revised using reports of new established native and non-native fishes in Texas, reports of new fish occurrences among drainages, and changes in species taxonomic nomenclature. We provided the first dichotomous keys for major drainage basins in Texas. Among the 171 native inland fishes, 6 species are considered extinct or extirpated, 13 species are listed as threatened or endangered by U.S. Fish and Wildlife Service, and 59 spe- cies are listed as Species of Greatest Conservation Need (SGCN) by the state of Texas.
    [Show full text]