Structure-Based Classification and Anti-Cancer Effects of Plant Metabolites
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Synthesis and Bioactivity of Analogues of the Marine Antibiotic Tropodithietic Acid
Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Patrick Rabe1, Tim A. Klapschinski1, Nelson L. Brock1, Christian A. Citron1, Paul D’Alvise2, Lone Gram2 and Jeroen S. Dickschat*1 Letter Open Access Address: Beilstein J. Org. Chem. 2014, 10, 1796–1801. 1Kekulé-Institut für Organische Chemie, Rheinische doi:10.3762/bjoc.10.188 Friedrich-Wilhelms-Universität Bonn, Gerhard-Domagk-Straße 1, 53121 Bonn, Germany and 2Department of Systems Biology, Received: 17 April 2014 Technical University of Denmark, Matematiktorvet bldg. 301, 2800 Accepted: 22 July 2014 Kongens Lyngby, Denmark Published: 06 August 2014 Email: This article is part of the Thematic Series "Natural products in synthesis Jeroen S. Dickschat* - [email protected] and biosynthesis". * Corresponding author Associate Editor: K. N. Ganesh Keywords: © 2014 Rabe et al; licensee Beilstein-Institut. antibiotics; natural products; Roseobacter; SAR study; tropodithietic License and terms: see end of document. acid; tropone Abstract Tropodithietic acid (TDA) is a structurally unique sulfur-containing antibiotic from the Roseobacter clade bacterium Phaeobacter inhibens DSM 17395 and a few other related species. We have synthesised several structural analogues of TDA and used them in bioactivity tests against Staphylococcus aureus and Vibrio anguillarum for a structure–activity relationship (SAR) study, revealing that the sulfur-free analogue of TDA, tropone-2-carboxylic acid, has an antibiotic activity that is even stronger than the bioactivity of the natural product. The synthesis of this compound and of several analogues is presented and the bioactivity of the synthetic compounds is discussed. Introduction Tropodithietic acid (TDA, 1a) is an antibiotic produced by the that are located on a plasmid [6,7], and the adjacent paaZ2 gene marine bacterium Phaeobacter inhibens. -
Reports Based on the Work Performed by the Nordic Project Group on Inherent Natural Toxicants in Food Plants and Mushrooms Has Been Published
Cucurbitacins in plant food Jørn Gry, Inge Søborg and Hans Christer Andersson TemaNord 2006:556 Cucurbitacins in plant food TemaNord 2006:556 © Nordic Council of Ministers, Copenhagen 2006 ISBN 92-893-1381-1 Print: Ekspressen Tryk & Kopicenter Copies: 200 Printed on environmentally friendly paper This publication can be ordered on www.norden.org/order. Other Nordic publications are available at www.norden.org/publications Printed in Denmark Nordic Council of Ministers Nordic Council Store Strandstræde 18 Store Strandstræde 18 DK-1255 Copenhagen K DK-1255 Copenhagen K Phone (+45) 3396 0200 Phone (+45) 3396 0400 Fax (+45) 3396 0202 Fax (+45) 3311 1870 www.norden.org The Nordic Food Policy Co-operation The Nordic Committee of Senior Officials for Food Issues is concerned with basic Food Policy issues relating to food and nutrition, food toxicology and food microbiology, risk evaluation, food control and food legislation. The co-operation aims at protection of the health of the consumer, common utilisation of professional and administrative resources and at Nordic and international developments in this field. Nordic co-operation Nordic co-operation, one of the oldest and most wide-ranging regional partnerships in the world, involves Denmark, Finland, Iceland, Norway, Sweden, the Faroe Islands, Greenland and Åland. Co- operation reinforces the sense of Nordic community while respecting national differences and simi- larities, makes it possible to uphold Nordic interests in the world at large and promotes positive relations between neighbouring peoples. Co-operation was formalised in 1952 when the Nordic Council was set up as a forum for parlia- mentarians and governments. The Helsinki Treaty of 1962 has formed the framework for Nordic partnership ever since. -
United States Patent (10) Patent No.: US 8,329,217 B2 Vergezz
US008329217B2 (12) United States Patent (10) Patent No.: US 8,329,217 B2 VergezZ. et all e 45) Date of Patent:e Dec.e 11, 2012 (54) DUAL CONTROLLED RELEASE DOSAGE 5, 190,765 A 3, 1993 Jao et al. FORM 5,208,037 A 5/1993 Wright et al. 5,252.338 A 10, 1993 Jao et al. 5,399,359 A 3, 1995 Baichwal (75) Inventors: Juan A. Vergez, Buenos Aires (AR): 5,543,155 A 8, 1996 Fekete et al. Marcelo A. Ricci, Buenos Aires (AR) 5,674,895 A 10/1997 Guittard et al. 5,788,987 A 8, 1998 Busetti et al. (73) Assignee: Osmotica Kereskedelmi es Szolgaltato 5,840,754. A 1 1/1998 Guittard et al. Kft, Budapest (HU) 5,866,164 A 2/1999 Kuczynski et al. s 5,912,268 A 6/1999 Guittard et al. 6,106,864 A 8, 2000 Dolan et al. (*) Notice: Subject to any disclaimer, the term of this 6,207,191 B1* 3/2001 Crison et al. .................. 424,472 patent is extended or adjusted under 35 2002/0010216 A1 1/2002 Rogosky et al. U.S.C. 154(b) by 1407 days. 2006/0177510 A1 8/2006 Vergez (21) Appl. No.: 11/355,315 FOREIGN PATENT DOCUMENTS y x- - - 9 JP 2646170 8, 1997 JP 2665858 10, 1997 (22) Filed: Feb. 15, 2006 WO 96.12477 5, 1996 WO 97.18814 5, 1997 (65) Prior Publication Data WO OOf 12069 3, 2000 WO OOf 18997 4/2000 US 2006/0204578 A1 Sep. 14, 2006 WO WOO1/51036 * 7/2OO1 Related U.S. -
Dissertation Enantioselective Β
DISSERTATION ENANTIOSELECTIVE β-FUNCTIONALIZATION OF ENALS VIA N-HETEROCYCLIC CARBENE CATALYSIS Submitted by Nicholas Andrew White Department of Chemistry In partial fulfillment of the requirements For the Degree of Doctor of Philosophy Colorado State University Fort Collins, Colorado Fall 2015 Doctoral Committee: Advisor: Tomislav Rovis Alan J. Kennan Eugene Y.-X. Chen Robert M. Williams Matt J. Kipper Copyright by Nicholas Andrew White 2015 All Rights Reserved ABSTRACT ENANTIOSELECTIVE β-FUNCTIONALIZATION OF ENALS VIA N-HETEROCYCLIC CARBENE CATALYSIS A series of δ-nitroesters were synthesized through the N-heterocyclic carbene catalyzed coupling of enals and nitroalkenes. The asymmetric coupling of these substrates via the homoenolate pathway afford δ-nitroesters in good yield, diastereoselectivity, and enantioselectivity. This methodology allows for the rapid synthesis of δ-lactams. Using this approach, we synthesized the pharmaceutically relevant piperidines paroxetine and femoxetine. A novel single-electron oxidation pathway for the N-heterocyclic carbene generated Breslow intermediate has been developed. Nitroarenes have been shown to transfer an oxygen from the nitro group to the β-position of an enal in an asymmetric fashion to generate β-hydroxy esters. This reaction affords desired β-hydroxy ester products in good yield and enantioselectivity and tolerates a wide range of enal substrates. A dimerization of aromatic enals to form 3,4-disubstituted cyclopentanones has been investigated. Using a single-electron oxidant, aromatic enals couple to form cyclopenanone products in good yield, good enantioselectivity, and excellent diastereoselectivity. A cross coupling has also been developed to afford non-symmetrical cyclopentanone products. ii ACKNOWLEDGEMENTS First, and foremost, I would like to thank my advisor, Professor Tomislav Rovis for his supervision and guidance over the past five years. -
Resonance Energies of Some Compounds Containing Nitrogen Or Oxygen
Reprint from Theoret. chim. Ada (Beri.) 17, 235—238 (1970) Springer-Verlag Berlin ■ Heidelberg ■ New York © by Springer- Verlag ■ Printed in Germany Resonance Energies of Some Compounds Containing Nitrogen or Oxygen M ic h a e l J. S. D e w a r and N. T r in a jst io Theoret. chim. Acta(Berl.) 17,235— 238(1970) Resonance Energies of Some Compounds Containing Nitrogen or Oxygen* Michael J. S. Dewar and N. Trinajstić** University of Texas, Department of Chemistry, Austin, Texas 78712, USA Received February 9, 1970 Resonance energies are calculated for a number of aromatic, and potentially aromatic, compounds containing nitrogen or oxygen, using a recent version of our SCF MO n approximation. Recently we reported [1] a variant of our earlier SCF MO n approximation [2—5] in which the one-electron resonance integral (/?£)) is determined from the Mulliken relation instead of the Devvar-Schmeising thermocycle [6, 7]; i.e. fij = K S tj ( 1) where K is a constant characteristic of the atoms i and j. This procedure avoids a difficulty inherent in the earlier treatment, i.e. the need for data concerning “pure” double bonds. Such data are available only for bonds formed by carbon, nitrogen, and oxygen; the thermocycle approach could not therefore be extended to other elements. One important conclusion from the earlier papers was that bonds in classical polyenes [3, 4], and in classical conjugated compounds containing nitrogen or oxygen [8], are localized, in the sense that the calculated heats of atomization can be expressed as sums of “polyene” bond energies that carry over from one molecule to another. -
Cucurbitacins – an Insight Into Medicinal Leads from Nature
PHCOG REV. REVIEW ARTICLE Cucurbitacins – An insight into medicinal leads from nature Ujjwal Kaushik, Vidhu Aeri, Showkat R. Mir Department of Pharmacognosy and Phytochemistry, Phytochemistry Research Laboratory, Faculty of Pharmacy, New Delhi, India Submitted: 05‑03‑2014 Revised: 27‑03‑2014 Published: 05‑05‑2015 ABSTRACT Cucurbitacins which are structurally diverse triterpenes found in the members of Cucurbitaceae and several other plant families possess immense pharmacological potential. This diverse group of compounds may prove to be important lead molecules for future research. Research focused on these unattended medicinal leads from the nature can prove to be of immense significance in generating scientifically validated data with regard to their efficacy and possible role in various diseases. This review is aimed to provide an insight into the chemical nature and medicinal potential of these compounds exploring their proposed mode of action, probable molecular targets and to have an outlook on future directions of their use as medicinal agents. Key words: Cucurbitaceae, cucurbitacin, triterpenoids INTRODUCTION disease like diabetes. Plants from genus Trichosanthes have been used in China by herbal drug practitioners.[4] The purpose of this Plant secondary metabolites represent tremendous resources for review is to gather the information related to these highly diverse scientific and clinical research as well as for new drug development. group of compounds which may be useful in future research. Cucurbitacins are multiplex category of diverse compounds found in the plants of family Cucurbitaceae. Medicinal and toxic OCCURRENCE properties of these compounds have stimulated a continuing interest in them.[1] Many genus of Cucurbits viz. Trichosanthes, Cucurbitacins are found in many cucurbitaceous plants. -
Synthesis and Bioactivity of Analogues of the Marine Antibiotic Tropodithietic Acid
Downloaded from orbit.dtu.dk on: Oct 05, 2021 Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Rabe, Patrick; Klapschinski, Tim A.; Brock, Nelson L.; Citron, Christian A.; D'Alvise, Paul; Gram, Lone; Dickschat, Jeroen S. Published in: Beilstein Journal of Organic Chemistry Link to article, DOI: 10.3762/bjoc.10.188 Publication date: 2014 Document Version Publisher's PDF, also known as Version of record Link back to DTU Orbit Citation (APA): Rabe, P., Klapschinski, T. A., Brock, N. L., Citron, C. A., D'Alvise, P., Gram, L., & Dickschat, J. S. (2014). Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid. Beilstein Journal of Organic Chemistry, 10, 1796-1801. https://doi.org/10.3762/bjoc.10.188 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. Users may download and print one copy of any publication from the public portal for the purpose of private study or research. You may not further distribute the material or use it for any profit-making activity or commercial gain You may freely distribute the URL identifying the publication in the public portal If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Synthesis and bioactivity of analogues of the marine antibiotic tropodithietic acid Patrick Rabe1, Tim A. -
Computational Studies of the Tropone Natural Products, Thiotropocin
Computational Studies of the Tropone Natural SCHEME 1 Products, Thiotropocin, Tropodithietic Acid, and Troposulfenin. Significance of Thiocarbonyl-Enol Tautomerism Edyta M. Greer,†,1 David Aebisher,† Alexander Greer,*,† and Ronald Bentley*,‡ Department of Chemistry and Graduate Center & The City UniVersity of New York (CUNY), Brooklyn College, Brooklyn, New York 11210, and Department of Biological Sciences, UniVersity of Pittsburgh, Pittsburgh, PennsylVania 15260 [email protected]; [email protected] ReceiVed August 22, 2007 viability of 1-3.2-16 To take an example, in 2005, an antibiotic substance was described imprecisely as “the sulfur containing compound thiotropocin or tropodithietic acid produced by Roseobacter strain 27-4...”.10 In 2006, Laatsch16 cited unpub- lished work suggesting that previous structural assignments of 1 and 32-15 were incorrect and that they should instead be 2.16 The X-ray structure has been obtained for 2,8 although Cane provided evidence for the detection of 1 from 13C-labeling 12 experiments in DMSO and CDCl3 solution. One problem is that it is unclear whether 1-3 rearrange with - Computations provide insight to the stability and isomeric each other in solution. Compounds 1 3 can be regarded as possibilities of thiotropocin, tropodithietic acid, and tropo- tautomers and may possess dynamic behavior, possibly influ- enced by solvent proticity and pH. However, no spectroscopic sulfenin. Thiotropocin and tropodithietic acid contain a flat evidence exists for the conjugate base. No previous study 7-membered ring and delocalized π-bonds similar to those + postulated a role of the conjugate base 4 in the equilibration of of tropylium ion (C7H7 ). Troposulfenin is far less stable; it 1-3. -
US 2006/0233859 A1 Whitcup Et Al
US 20060233859A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2006/0233859 A1 Whitcup et al. (43) Pub. Date: Oct. 19, 2006 (54) METHODS FOR TREATING RETINOPATHY Related U.S. Application Data WITH EXTENDED THERAPEUTIC EFFECT (63) Continuation-in-part of application No. 10/837,357, (75) Inventors: Scott M. Whitcup, Laguna Hills, CA filed on Apr. 30, 2004. (US); David A. Weber, Danville, CA (US) Publication Classification Correspondence Address: (51) Int. Cl. ALLERGAN, INC., LEGAL DEPARTMENT A 6LX 3/573 (2006.01) 2525 DUPONT DRIVE, T2-7H A6F 2/00 (2006.01) IRVINE, CA 92.612-1599 (US) (52) U.S. Cl. ............................................ 424/427: 514/179 (73) Assignee: Allergan, Inc., Irvine, CA (57) ABSTRACT (21) Appl. No.: 11/292,544 Methods for treating and preventing retinopathic conditions by administering a glucocorticoid to the vitreous chamber of (22) Filed: Dec. 2, 2005 a patient at risk of, or Suffering from, the retinopathy. Patent Application Publication Oct. 19, 2006 Sheet 1 of 3 US 2006/0233859 A1 FIGURE 1 Vitreous Humor Concentrations of Dexamethasone in Treated Eye: Comparison of all Dose Levels and Dosage Forms 10000 an(0am-350T OOO - an a 700T 5 100 XC - - - Quantification Limit 0.35OE 10 - a 700E Hours FIGURE 2 Percent of Dexamethasone Released from DEXPS DDS over Time for all Dose Levels and Dosage Forms 60 50 40 - : 30 4 S. 20 10 O Hours Patent Application Publication Oct. 19, 2006 Sheet 2 of 3 US 2006/0233859 A1 FIGURE 3 Vitreous Humor Concentrations of Dexamethasone in Treated Eye: Comparison of all Dose Levels and Dosage Forms - - - Quantification Limit sm 700E Days FIGURE 4 Percent of Dexamethasone Released from DEX PS DDS Over Time for all Dose Levels and Dosage Forms Days Patent Application Publication Oct. -
Grant Application for 2019-2021
ISP Uppsala Universitet Deadline Box 549 IPPS 15 August 2018 SE-751 21 Uppsala, Sweden Fax +46184713495 IPICS 2 September2018 [email protected] I Grant application for 201I 9-2021 Research Groups and Scientific Networks Submit this application and enclosures by email attachment with a scanned/photographed copy of the first signed page. Read the separate document Guidelines for Enclosures and Budget for more information. Hover your pointer over theblueunderlinedwordsin this document for specific instructions.NOTE! ISP manages personal data (with care and only as long as necessary) provided on this form and in enclosures in order to honor the agreements with you and with Sida. Program Activity code(if settled) Chemistry X Other ☐ ANRAP Mathematics ☐ Physics ☐ Applicant(Research group leader/Network coordinator: title, given name, family name) EMERITUS PROFESSOR MOHAMMED MOSIHUZZAMAN Deputy: Address Department/unit: ANRAP Secretariat University/institute: Bangladesh University of Health Sciences(BUHS), Room No:C-14 Street (visiting address): Darussalam, Mirpur P.O Box number: Post/zip code: Dhaka-1216 City:Dhaka Country: Bangladesh E-mail address(es):[email protected];[email protected] Website: www.anrap.org Telephone and telefax Office Mobile Fax 88-02-8035501-06 8801755654160 (Ext 1312) Name of Research Group/NetworK ASIAN NETWORK OF RESEARCH ON ANTIDIABETIC PLANTS (ANRAP) City: Approved by the Department: ………………………………………………………/ Date: Signature by Head of Department/Name in printing: Summary of budget request (SEK) 2019 2020 2021 Total -
Ancient and Recent Medicinal Uses of Cucurbitaceae Family
International Journal of Therapeutic Applications, Volume 9, 2013, 11-19 ANCIENT AND RECENT MEDICINAL USES OF CUCURBITACEAE FAMILY Shweta S. Saboo 1*, Priyanka K. Thorat 1, Ganesh G. Tapadiya 2, S S. Khadabadi 1 1 Department of Pharmacognosy, Govt. College of Pharmacy, Aurangabad, India 2 R. C. Patel Institute of Pharmaceutical Education & Research, Shirpur, India known as 9β-methyl-19-nor lanosta-5-ene) (Fig. ABSTRACT 1) (Pryzek, 1979). The family Cucurbitaceae includes a The cucurbitacins are arbitrarily divided into large group of plants which are medicinally twelve categories, incorporating cucurbitacins A- valuable. It is a family of about 130 genera T. The various cucurbitacins differ with respect and about 800 species. Seeds or fruit parts to oxygen functionalities at various positions. of some cucurbits are reported to possess The structures of a few cucurbitacins (A, C, B purgatives, emetics and antihelmintics and D) are given in Fig. 2. These cucurbitacins properties due to the secondary metabolite are also present in their glycosidic forms such cucurbitacin content. A number of as cucurbitacin B glucoside containing glucose compounds of this group have been as the glycone moiety. 1 investigated for their cytotoxic, hepatoprotective, anti-inflammatory and cardiovascular effects. Cucurbitacins constitute a group of diverse triterpenoid substances which are well known for their bitterness and toxicity. They are highly oxygenated, tetracyclic triterpenes containing a cucurbitane skeleton characterized. The cucurbitacins are arbitrarily divided into twelve categories, incorporating cucurbitacins A-T. A lot of work has been done by the researchers throughout the world on various plants of Fig. 1 : Basic structure of cucurbitacins (19- the family Cucurbitaceae. -
Introduction (Pdf)
Dictionary of Natural Products on CD-ROM This introduction screen gives access to (a) a general introduction to the scope and content of DNP on CD-ROM, followed by (b) an extensive review of the different types of natural product and the way in which they are organised and categorised in DNP. You may access the section of your choice by clicking on the appropriate line below, or you may scroll through the text forwards or backwards from any point. Introduction to the DNP database page 3 Data presentation and organisation 3 Derivatives and variants 3 Chemical names and synonyms 4 CAS Registry Numbers 6 Diagrams 7 Stereochemical conventions 7 Molecular formula and molecular weight 8 Source 9 Importance/use 9 Type of Compound 9 Physical Data 9 Hazard and toxicity information 10 Bibliographic References 11 Journal abbreviations 12 Entry under review 12 Description of Natural Product Structures 13 Aliphatic natural products 15 Semiochemicals 15 Lipids 22 Polyketides 29 Carbohydrates 35 Oxygen heterocycles 44 Simple aromatic natural products 45 Benzofuranoids 48 Benzopyranoids 49 1 Flavonoids page 51 Tannins 60 Lignans 64 Polycyclic aromatic natural products 68 Terpenoids 72 Monoterpenoids 73 Sesquiterpenoids 77 Diterpenoids 101 Sesterterpenoids 118 Triterpenoids 121 Tetraterpenoids 131 Miscellaneous terpenoids 133 Meroterpenoids 133 Steroids 135 The sterols 140 Aminoacids and peptides 148 Aminoacids 148 Peptides 150 β-Lactams 151 Glycopeptides 153 Alkaloids 154 Alkaloids derived from ornithine 154 Alkaloids derived from lysine 156 Alkaloids