Light Reproduction of Pilobolus
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Characterization of Two Undescribed Mucoralean Species with Specific
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 26 March 2018 doi:10.20944/preprints201803.0204.v1 1 Article 2 Characterization of Two Undescribed Mucoralean 3 Species with Specific Habitats in Korea 4 Seo Hee Lee, Thuong T. T. Nguyen and Hyang Burm Lee* 5 Division of Food Technology, Biotechnology and Agrochemistry, College of Agriculture and Life Sciences, 6 Chonnam National University, Gwangju 61186, Korea; [email protected] (S.H.L.); 7 [email protected] (T.T.T.N.) 8 * Correspondence: [email protected]; Tel.: +82-(0)62-530-2136 9 10 Abstract: The order Mucorales, the largest in number of species within the Mucoromycotina, 11 comprises typically fast-growing saprotrophic fungi. During a study of the fungal diversity of 12 undiscovered taxa in Korea, two mucoralean strains, CNUFC-GWD3-9 and CNUFC-EGF1-4, were 13 isolated from specific habitats including freshwater and fecal samples, respectively, in Korea. The 14 strains were analyzed both for morphology and phylogeny based on the internal transcribed 15 spacer (ITS) and large subunit (LSU) of 28S ribosomal DNA regions. On the basis of their 16 morphological characteristics and sequence analyses, isolates CNUFC-GWD3-9 and CNUFC- 17 EGF1-4 were confirmed to be Gilbertella persicaria and Pilobolus crystallinus, respectively.To the 18 best of our knowledge, there are no published literature records of these two genera in Korea. 19 Keywords: Gilbertella persicaria; Pilobolus crystallinus; mucoralean fungi; phylogeny; morphology; 20 undiscovered taxa 21 22 1. Introduction 23 Previously, taxa of the former phylum Zygomycota were distributed among the phylum 24 Glomeromycota and four subphyla incertae sedis, including Mucoromycotina, Kickxellomycotina, 25 Zoopagomycotina, and Entomophthoromycotina [1]. -
<I>Mucorales</I>
Persoonia 30, 2013: 57–76 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158513X666259 The family structure of the Mucorales: a synoptic revision based on comprehensive multigene-genealogies K. Hoffmann1,2, J. Pawłowska3, G. Walther1,2,4, M. Wrzosek3, G.S. de Hoog4, G.L. Benny5*, P.M. Kirk6*, K. Voigt1,2* Key words Abstract The Mucorales (Mucoromycotina) are one of the most ancient groups of fungi comprising ubiquitous, mostly saprotrophic organisms. The first comprehensive molecular studies 11 yr ago revealed the traditional Mucorales classification scheme, mainly based on morphology, as highly artificial. Since then only single clades have been families investigated in detail but a robust classification of the higher levels based on DNA data has not been published phylogeny yet. Therefore we provide a classification based on a phylogenetic analysis of four molecular markers including the large and the small subunit of the ribosomal DNA, the partial actin gene and the partial gene for the translation elongation factor 1-alpha. The dataset comprises 201 isolates in 103 species and represents about one half of the currently accepted species in this order. Previous family concepts are reviewed and the family structure inferred from the multilocus phylogeny is introduced and discussed. Main differences between the current classification and preceding concepts affects the existing families Lichtheimiaceae and Cunninghamellaceae, as well as the genera Backusella and Lentamyces which recently obtained the status of families along with the Rhizopodaceae comprising Rhizopus, Sporodiniella and Syzygites. Compensatory base change analyses in the Lichtheimiaceae confirmed the lower level classification of Lichtheimia and Rhizomucor while genera such as Circinella or Syncephalastrum completely lacked compensatory base changes. -
THE Fungus FILES 31 REPRODUCTION & DEVELOPMENT
Reproduction and Development SPORES AND SO MUCH MORE! At any given time, the air we breathe is filled with the spores of many different types of fungi. They form a large proportion of the “flecks” that are seen when direct sunlight shines into a room. They are also remarkably small; 1800 spores could fit lined up on a piece of thread 1 cm long. Fungi typically release extremely high numbers of spores at a time as most of them will not germinate due to landing on unfavourable habitats, being eaten by invertebrates, or simply crowded out by intense competition. A mid-sized gilled mushroom will release up to 20 billion spores over 4-6 days at a rate of 100 million spores per hour. One specimen of the common bracket fungus (Ganoderma applanatum) can produce 350 000 spores per second which means 30 billion spores a day and 4500 billion in one season. Giant puffballs can release a number of spores that number into the trillions. Spores are dispersed via wind, rain, water currents, insects, birds and animals and by people on clothing. Spores contain little or no food so it is essential they land on a viable food source. They can also remain dormant for up to 20 years waiting for an opportune moment to germinate. WHAT ABOUT LIGHT? Though fungi do not need light for food production, fruiting bodies generally grow toward a source of light. Light levels can affect the release of spores; some fungi release spores in the absence of light whereas others (such as the spore throwing Pilobolus) release during the presence of light. -
Morphological and Molecular Characterization of Ascobolus and Pilobolus Fungi in Wild Herbivore Dung in Nairobi National Park Mi
MORPHOLOGICAL AND MOLECULAR CHARACTERIZATION OF ASCOBOLUS AND PILOBOLUS FUNGI IN WILD HERBIVORE DUNG IN NAIROBI NATIONAL PARK MIYUNGA ANTOINETTE ALUOCH A Research Thesis Submitted to the Graduate School in Partial Fulfilment for the Requirements of the Award of Master of Science Degree in Biochemistry of Egerton University EGERTON UNIVERSITY NOVEMBER, 2015 DECLARATION AND RECOMMENDATION Declaration This thesis is my original work and has not been submitted or presented for examination in any institution Miyunga Antoinette Aluoch SM14/3263/12 Signature..................................................... Date………………………………….. Recommendation This thesis has been submitted for examination with our approval as supervisors Dr. Meshack Obonyo Senior Lecturer Department of Biochemistry and Molecular Biology Egerton University Signature..................................................... Date………………………………….. Dr. Daniel Okun Lecturer Department of Biochemistry and Biotechnology Kenyatta University Signature..................................................... Date………………………………….. ii COPYRIGHT ©2015 Miyunga A Aluoch No parts of this work may be reproduced, stored in a retrieval system or transmitted by any means, mechanical photocopying and electronic process, recording or otherwise copied for public or private use without the prior written permission from Egerton University. All rights reserved. iii DEDICATION This thesis is dedicated to my family for their love and support always. iv ACKNOWLEDGEMENT I thank my supervisors Dr. Meshack Obonyo of Department -
THE Fungus FILES BIOLOGY & CLASSIFICATION
REPRODUCTION & DEVELOPMENT The Fung from the Dung Flipbook OBJECTIVE Activity 2.3 • To illustrate how one fungus disperses its spores BACKGROUND INFORMATION GRADES Fungi have developed many bizarre and interesting adaptations to K-6 (Care partners for K-2) disperse their spores. The hat thrower fungus, Pilobolus, is especially intriguing. This mushroom is coprophilic which means it likes to TYPE OF ACTIVITY live in dung. Pilobolus has evolved a way to shoot its spores onto Flipbook the grass where it is eaten by cattle. Its “shotgun” is a stalk swollen with cell sap, with a black mass of spores on the top. Below, the MATERIALS swollen tip is a light-sensitive area. The light sensing region affects • letter sized paper the growth of Pilobolus by causing it to orient toward the sun. As (cardstock would be ideal) the fungus matures, water pressure builds in the stalk until the tip • pencil crayons, crayons, or explodes, launching the spores into the daylight at speeds up to markers 50km/hr and for distances up to 2.5m! Shooting the spores into the • copies of page 45-46 for daylight gives them a better chance of landing in a sunny place each student where grass is growing. When the grass is eaten by the cattle, the • scissors tough spores pass through their digestive system and begin to grow • heavy duty stapler in a pile of dung where the cycle begins again. • copies of the poem, “Pilobolus, the Fung in the TEACHER INSTRUCTIONS Dung” from Tom Volk’s 1. Make copies of pages 45-46 and handout to each student. -
Pilobolusspecies Found on Herbivore Dung from the São Paulo
Acta bot. bras. 22(3): 614-620. 2008 Pilobolus species found on herbivore dung from the São Paulo Zoological Park, Brazil Aírton Viriato1 Received: May 2, 2007. Accepted: September 4, 2007 RESUMO – (Espécies de Pilobolus encontradas em fezes de herbívoros do Parque Zoológico de São Paulo, Brasil). Para o estudo de espécies de Pilobolus, foram coletadas 168 amostras de fezes de animais herbívoros no Parque Zoológico da cidade de São Paulo. Dez espécies foram verificadas, ilustradas e descritas e uma chave de identificação é apresentada. Palavras-chave: fungos coprófilos, Mucorales, Zygomycota ABSTRACT – (Pilobolus species found on herbivore dung from the São Paulo Zoological Park, Brazil). A study of Pilobolus species from 168 dung samples of various herbivoresous animals, collected in the São Paulo Zoological Park, was carried out. Ten species were found, illustrated, described, and a key for their identification is provided. Key words: coprophilous fungi, Mucorales, Zygomycota Introduction other at the base of the subsporangial vesicle. The orange carotenoid pigments act as light sensors which Pilobolus is a saprotrophic genus belonging to the are lined up with each other by the expanded Mucorales (Zygomycota), frequently found in subsporangial vesicle acting as a lens, so that the herbivorous animals feces (Alexopoulos et al. 1996). sporangium is always aimed at the brightest light. The The genus is characterized by coprophilous habit, sporangia are black, sub-hemispherical and have positive phototropism and method of spore dispersal. resistant walls. The columellae are generally smooth In the dispersal process, the mature sporangium is and long-elliptical, and sometimes mammiform. The thrown more than 2 meters by dehiscence of the spores are spherical to ellipsoid, and generally smooth mucilage found at the junction of the columella with walled, hyaline or with carotenoid pigments. -
1 Evaluating the Explosive Spore Discharge Mechanism of Pilobolus
Evaluating the explosive spore discharge mechanism of Pilobolus Crystallinus using mechanical measurements and mathematical modeling John Tuthill May 9, 2005 Biomechanics Professor Rachel Merz Abstract The coprophilous Zygomycete Pilobolus uses osmotic turgor pressure as a means of explosive spore discharge, shooting its sporangium up to several meters away from the sporangiophore. This study attempts to clarify the sporangial discharge model by offering the first mechanical measurements of the internal turgor pressure of Pilobolus. In order to account for the forces included within the hypothesized shooting mechanism, a mathematical model is used to model the sporangial projectile trajectory. Measurements of subsporangial turgor pressure using a miniature strain gauge were partially successful, showing a pressure of .11 MPa. The mathematical model found that a pressure of .474 MPa would be needed to propel the projectile over the average measured distance, 1.14 m. The difference between the measured and the predicted results is attributed to error within the mechanical measurements. These results emphasize the importance of using innovative and rigorous methods for measuring internal turgor pressure, and encourage further examination of the Pilobolus spore discharge apparatus. Introduction The unfortunate immobility of the fungi is a limiting factor for their dispersal and distribution. Their sessile state generally leaves two methods of expansion: growth into an adjoining area or dispersal of spores. The latter is often the more feasible option. Fungal spores are lighter and smaller than plant seeds, and consequently encounter increased effects from drag (Vogel 2005). Most fungi do not grow tall enough to effectively send their spores through the sluggish boundary layer of still air surrounding them. -
A Checklist of Coprophilous Fungi and Other Fungi Recorded on Dung from Brazil Introduction Coprophilous Fungi Are an Important
A checklist of coprophilous fungi and other fungi recorded on dung from Brazil FRANCISCO JUNIOR SIMÕES CALAÇA, NATHAN CARVALHO DA SILVA & SOLANGE XAVIER-SANTOS Universidade Estadual de Goiás, Unidade Universitária de Ciências Exatas e Tecnológicas, BR 153 nº 3.105, Fazenda Barreiro do Meio 75132 903, Anápolis, Goiás, Brazil. CORRESPONDENCE TO: [email protected] ABSTRACT — A review of the literature published between 1919 (the earliest known record) and 2013 has made it possible to confirm the occurrence of 209 species of coprophilous fungi (sensu lato) in Brazil, which are distributed in 259 records in 12 states of the Federation, with Pernambuco being the State most represented. The phylum most found was Ascomycota (117 species), followed by Zygomycota (54), Basidiomycota (25), Myxomycota (11), Oomycota (1) and Proteobacteria (1). KEY WORDS — Brazilian fungi, fimicolous fungi, diversity Introduction Coprophilous fungi are an important group of organisms from the Zygomycota, Ascomycota and Basidiomycota and also some myxomycetes, oomycetes and myxobacteria. They use feces of various animals, especially herbivores, as a substrate (Lundqvist 1972; Bell 1983; Melo, Bezerra & Cavalcanti 2012). These fungi are an ecologically highly adapted group, capable of assimilating nutrients that are not used when food passes through the digestive tract of the animal, thus participating in decomposition processes and helping to recycle these nutrients in the environment (Harrower & Nagy 1979; Ávila, Chávez & García 2001; Krug, Benny & Keller 2004; Masunga et al. 2006; Richardson 2001a; Richardson 2003). The earliest documented record of coprophilous fungi in Brazil dates from 1919, when the mycologist and botanist Carlos Spegazzini (1858-1926) announced the occurrence of Psilocybe merdaria (Fr.) Ricken on Brazilian territory (specific substrate and location not given) (Spegazzini 1919; Katinas, Gutiérrez & Robles 2000). -
Some Factors Involved in Growth and Sporulation of Pilobolus Crystallinus Tode and Pilobolus Umbonatus Buller Kenneth L
University of Richmond UR Scholarship Repository Master's Theses Student Research 6-1964 Some factors involved in growth and sporulation of Pilobolus Crystallinus Tode and Pilobolus Umbonatus Buller Kenneth L. Poff Follow this and additional works at: http://scholarship.richmond.edu/masters-theses Part of the Biology Commons Recommended Citation Poff, Kenneth L., "Some factors involved in growth and sporulation of Pilobolus Crystallinus Tode and Pilobolus Umbonatus Buller" (1964). Master's Theses. Paper 885. This Thesis is brought to you for free and open access by the Student Research at UR Scholarship Repository. It has been accepted for inclusion in Master's Theses by an authorized administrator of UR Scholarship Repository. For more information, please contact [email protected]. LIBRARY OF Uniurrsity or1Richmond LIBRARY iiiVERSITY OF RICHMOND VIRGINIA i DATE DUE - 1 ~ _.--=~....... ~ I ---- I I ---- - -- [ - I I - ' - ' i - I. 1.. '. ' i I I l - GAYLORD t'Rl'tT£0fNU.S·"'• I I I SOME FACTORS INVOLVED Ilf GROWTH AND SPORULATION OF PILOBOLUS CRYSTALLINUS TODE AND PILOBOLUS UMBONATUS BULLER A Thesis Presented to the Faculty of the Graduate School of the University of Richmond in Partial Fulfillment or. the Requirements for the Degree of Master of Science LIBRARY ~VERSITY OF RICHMOND VIRGINIA by Kenneth Lloyd Poff June,, 1964 TABLE QE CONTENTS Abstract••••••••••••••••••••••• 1 Acknowledgments •••••••••••••••• 3 Introduction ••••••••••••••••••• 4 Materials and Methods ••••••••.•• 6 Results•••••••••••••••••••••••·lO Discussion -
What Do We Know About Fungi in Yellowstone National Park? Cathy L
What Do We Know about Fungi in Yellowstone National Park? Cathy L. Cripps and Leslie Eddington C. C C. R I PP S Agaricus species in grassland. ungi are the fabric that holds most ecosystems to- The pathogenic white pine blister rust (Cronartium ribicola), gether, yet they are often forgotten, ignored, underes- accidentally imported from Europe in the early 1900s, is cur- timated, or even reviled. Still it is the fungi in all their rently decimating whitebark pine forests. Fdiverse roles that weave organisms, organic matter, soil, and The bodies of all fungi except yeasts are comprised of rocks together. The Kingdom Fungi includes an estimated 1.5 hyphae, tiny microscopic threads that permeate soil, roots, million species worldwide (Hawksworth 2001)—molds, yeasts, leaves, and wood, feeding off the richness of forests and plant pathogens, aquatic fungi, coral fungi, teeth fungi, bird’s meadows. The mycelium (a mass of hyphal threads) can exist nest fungi, stinkhorns, cup fungi, morels, truffles mushrooms, out-of-sight almost indefinitely. The fleshy fruiting bodies boletes and more. Fungi were once thought to be related to plants (i.e., mushrooms) are the reproductive part of the fungus, but they lack chlorophyll and cellulose cell walls. Instead, fungi ephemeral structures designed to lift the fungus out of the have chitin cell walls, a key fungal characteristic. DNA reveals soil or wood in order to disseminate its reproductive propa- that fungi are most closely related to animals. Like animals they gules as spores. are heterotrophs and must obtain food from an outside source; How many fungi species occur in Yellowstone National in fungi this is accomplished by absorption. -
Growth, Fruiting Body Development and Laccase Production of Selected Coprini
Growth, fruiting body development and laccase production of selected coprini Dissertation zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultäten der Georg-August-Universität zu Göttingen vorgelegt von Mónica Navarro González (aus Cuernavaca, Mexiko) Göttingen, den 18.03.2008 D 7 Referent: Prof. Dr. Gerhard Braus Korreferent: Prof. Dr. Andrea Polle Tag der mündlichen Prüfung: 30.04.2008 To my parents: Othón and Isabel and to my nieces and nephews: Samy, Marco, Claus, Aldo, Andy, Lucero, and Montse …for bringing me always motivation, joy and love If you think you are a mushroom, jump into the basket Russian proverb Acknowledgments Since performing Ph. D is more than experiments, tables, graphs, monday seminars, conferences and so on I would like to express my gratitude: I am immensely happy to thank all those who have helped me in this hard way. My gratitude goes to Prof. Dr. Ursula Kües for giving me the opportunity to work in her group and for providing any opportunities for developing myself in many directions during my doctoral studies, and my life in Germany. I sincerely thank Dr. Andrzej Majcherczyk for his advices and direction on part of this work. My special thanks to Dr. Patrik Hoegger for his invaluable support and his endless patience during large part of my work. Furthermore, I would like to thank Prof. Dr. Gerhard Braus, Prof. Dr. Andrea Polle and Prof. Dr. Stefany Pöggeler for their readiness to evaluate my thesis and being my examiners. Víctor Mora-Pérez deserves part of the acknowledgments, without his primary motivation my interest for working with mushrooms during my bachelor studies probably would have never been appeared in my mind. -
Predicting Missing Links in Global Host-Parasite Networks
bioRxiv preprint doi: https://doi.org/10.1101/2020.02.25.965046; this version posted May 18, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Predicting missing links in global host-parasite networks Maxwell J. Farrell1;2;3∗, Mohamad Elmasri4, David Stephens4 & T. Jonathan Davies5;6 1Department of Biology, McGill University 2Ecology & Evolutionary Biology Department, University of Toronto 3Center for the Ecology of Infectious Diseases, University of Georgia 4Department of Mathematics & Statistics, McGill University 5Botany, Forest & Conservation Sciences, University of British Columbia 6African Centre for DNA Barcoding, University of Johannesburg ∗To whom correspondence should be addressed: e-mail: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.02.25.965046; this version posted May 18, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Abstract 1 1. Parasites that infect multiple species cause major health burdens globally, but for many, 2 the full suite of susceptible hosts is unknown. Predicting undocumented host-parasite 3 associations will help expand knowledge of parasite host specificities, promote the devel- 4 opment of theory in disease ecology and evolution, and support surveillance of multi-host 5 infectious diseases. Analysis of global species interaction networks allows for leveraging 6 of information across taxa, but link prediction at this scale is often limited by extreme 7 network sparsity, and lack of comparable trait data across species.