A Checklist of Coprophilous Fungi and Other Fungi Recorded on Dung from Brazil Introduction Coprophilous Fungi Are an Important
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Characterization of Two Undescribed Mucoralean Species with Specific
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 26 March 2018 doi:10.20944/preprints201803.0204.v1 1 Article 2 Characterization of Two Undescribed Mucoralean 3 Species with Specific Habitats in Korea 4 Seo Hee Lee, Thuong T. T. Nguyen and Hyang Burm Lee* 5 Division of Food Technology, Biotechnology and Agrochemistry, College of Agriculture and Life Sciences, 6 Chonnam National University, Gwangju 61186, Korea; [email protected] (S.H.L.); 7 [email protected] (T.T.T.N.) 8 * Correspondence: [email protected]; Tel.: +82-(0)62-530-2136 9 10 Abstract: The order Mucorales, the largest in number of species within the Mucoromycotina, 11 comprises typically fast-growing saprotrophic fungi. During a study of the fungal diversity of 12 undiscovered taxa in Korea, two mucoralean strains, CNUFC-GWD3-9 and CNUFC-EGF1-4, were 13 isolated from specific habitats including freshwater and fecal samples, respectively, in Korea. The 14 strains were analyzed both for morphology and phylogeny based on the internal transcribed 15 spacer (ITS) and large subunit (LSU) of 28S ribosomal DNA regions. On the basis of their 16 morphological characteristics and sequence analyses, isolates CNUFC-GWD3-9 and CNUFC- 17 EGF1-4 were confirmed to be Gilbertella persicaria and Pilobolus crystallinus, respectively.To the 18 best of our knowledge, there are no published literature records of these two genera in Korea. 19 Keywords: Gilbertella persicaria; Pilobolus crystallinus; mucoralean fungi; phylogeny; morphology; 20 undiscovered taxa 21 22 1. Introduction 23 Previously, taxa of the former phylum Zygomycota were distributed among the phylum 24 Glomeromycota and four subphyla incertae sedis, including Mucoromycotina, Kickxellomycotina, 25 Zoopagomycotina, and Entomophthoromycotina [1]. -
Agaricales, Basidiomycota) Occurring in Punjab, India
Current Research in Environmental & Applied Mycology 5 (3): 213–247(2015) ISSN 2229-2225 www.creamjournal.org Article CREAM Copyright © 2015 Online Edition Doi 10.5943/cream/5/3/6 Ecology, Distribution Perspective, Economic Utility and Conservation of Coprophilous Agarics (Agaricales, Basidiomycota) Occurring in Punjab, India Amandeep K1*, Atri NS2 and Munruchi K2 1Desh Bhagat College of Education, Bardwal–Dhuri–148024, Punjab, India. 2Department of Botany, Punjabi University, Patiala–147002, Punjab, India. Amandeep K, Atri NS, Munruchi K 2015 – Ecology, Distribution Perspective, Economic Utility and Conservation of Coprophilous Agarics (Agaricales, Basidiomycota) Occurring in Punjab, India. Current Research in Environmental & Applied Mycology 5(3), 213–247, Doi 10.5943/cream/5/3/6 Abstract This paper includes the results of eco-taxonomic studies of coprophilous mushrooms in Punjab, India. The information is based on the survey to dung localities of the state during the various years from 2007-2011. A total number of 172 collections have been observed, growing as saprobes on dung of various domesticated and wild herbivorous animals in pastures, open areas, zoological parks, and on dung heaps along roadsides or along village ponds, etc. High coprophilous mushrooms’ diversity has been established and a number of rare and sensitive species recorded with the present study. The observed collections belong to 95 species spread over 20 genera and 07 families of the order Agaricales. The present paper discusses the distribution of these mushrooms in Punjab among different seasons, regions, habitats, and growing habits along with their economic utility, habitat management and conservation. This is the first attempt in which various dung localities of the state has been explored systematically to ascertain the diversity, seasonal availability, distribution and ecology of coprophilous mushrooms. -
Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins Clément Pellegrin, Emmanuelle Morin, Francis M
Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins Clément Pellegrin, Emmanuelle Morin, Francis M. Martin, Claire Veneault-Fourrey To cite this version: Clément Pellegrin, Emmanuelle Morin, Francis M. Martin, Claire Veneault-Fourrey. Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins. Frontiers in Microbiology, Frontiers Media, 2015, 6, pp.1-15. 10.3389/fmicb.2015.01278. hal- 01269483 HAL Id: hal-01269483 https://hal.archives-ouvertes.fr/hal-01269483 Submitted on 27 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License ORIGINAL RESEARCH published: 18 November 2015 doi: 10.3389/fmicb.2015.01278 Comparative Analysis of Secretomes from Ectomycorrhizal Fungi with an Emphasis on Small-Secreted Proteins Clement Pellegrin 1, 2, Emmanuelle Morin 2, Francis M. Martin 2 and Claire Veneault-Fourrey 1, 2* 1 UMR 1136 Interactions Arbres/Microorganismes, Université de Lorraine, Vandoeuvre-lès-Nancy, France, 2 UMR 1136 Interactions Arbres/Microorganismes, Laboratoire d’Excellence ARBRE, Institut National de la Recherche Agronomique, INRA-Nancy, Champenoux, France Fungi are major players in the carbon cycle in forest ecosystems due to the wide range of interactions they have with plants either through soil degradation processes by litter decayers or biotrophic interactions with pathogenic and ectomycorrhizal symbionts. -
Fungal Planet Description Sheets: 716–784 By: P.W
Fungal Planet description sheets: 716–784 By: P.W. Crous, M.J. Wingfield, T.I. Burgess, G.E.St.J. Hardy, J. Gené, J. Guarro, I.G. Baseia, D. García, L.F.P. Gusmão, C.M. Souza-Motta, R. Thangavel, S. Adamčík, A. Barili, C.W. Barnes, J.D.P. Bezerra, J.J. Bordallo, J.F. Cano-Lira, R.J.V. de Oliveira, E. Ercole, V. Hubka, I. Iturrieta-González, A. Kubátová, M.P. Martín, P.-A. Moreau, A. Morte, M.E. Ordoñez, A. Rodríguez, A.M. Stchigel, A. Vizzini, J. Abdollahzadeh, V.P. Abreu, K. Adamčíková, G.M.R. Albuquerque, A.V. Alexandrova, E. Álvarez Duarte, C. Armstrong-Cho, S. Banniza, R.N. Barbosa, J.-M. Bellanger, J.L. Bezerra, T.S. Cabral, M. Caboň, E. Caicedo, T. Cantillo, A.J. Carnegie, L.T. Carmo, R.F. Castañeda-Ruiz, C.R. Clement, A. Čmoková, L.B. Conceição, R.H.S.F. Cruz, U. Damm, B.D.B. da Silva, G.A. da Silva, R.M.F. da Silva, A.L.C.M. de A. Santiago, L.F. de Oliveira, C.A.F. de Souza, F. Déniel, B. Dima, G. Dong, J. Edwards, C.R. Félix, J. Fournier, T.B. Gibertoni, K. Hosaka, T. Iturriaga, M. Jadan, J.-L. Jany, Ž. Jurjević, M. Kolařík, I. Kušan, M.F. Landell, T.R. Leite Cordeiro, D.X. Lima, M. Loizides, S. Luo, A.R. Machado, H. Madrid, O.M.C. Magalhães, P. Marinho, N. Matočec, A. Mešić, A.N. Miller, O.V. Morozova, R.P. Neves, K. Nonaka, A. Nováková, N.H. -
Molecular Phylogenetic and Scanning Electron Microscopical Analyses
Acta Biologica Hungarica 59 (3), pp. 365–383 (2008) DOI: 10.1556/ABiol.59.2008.3.10 MOLECULAR PHYLOGENETIC AND SCANNING ELECTRON MICROSCOPICAL ANALYSES PLACES THE CHOANEPHORACEAE AND THE GILBERTELLACEAE IN A MONOPHYLETIC GROUP WITHIN THE MUCORALES (ZYGOMYCETES, FUNGI) KERSTIN VOIGT1* and L. OLSSON2 1 Institut für Mikrobiologie, Pilz-Referenz-Zentrum, Friedrich-Schiller-Universität Jena, Neugasse 24, D-07743 Jena, Germany 2 Institut für Spezielle Zoologie und Evolutionsbiologie, Friedrich-Schiller-Universität Jena, Erbertstr. 1, D-07743 Jena, Germany (Received: May 4, 2007; accepted: June 11, 2007) A multi-gene genealogy based on maximum parsimony and distance analyses of the exonic genes for actin (act) and translation elongation factor 1 alpha (tef ), the nuclear genes for the small (18S) and large (28S) subunit ribosomal RNA (comprising 807, 1092, 1863, 389 characters, respectively) of all 50 gen- era of the Mucorales (Zygomycetes) suggests that the Choanephoraceae is a monophyletic group. The monotypic Gilbertellaceae appears in close phylogenetic relatedness to the Choanephoraceae. The mono- phyly of the Choanephoraceae has moderate to strong support (bootstrap proportions 67% and 96% in distance and maximum parsimony analyses, respectively), whereas the monophyly of the Choanephoraceae-Gilbertellaceae clade is supported by high bootstrap values (100% and 98%). This suggests that the two families can be joined into one family, which leads to the elimination of the Gilbertellaceae as a separate family. In order to test this hypothesis single-locus neighbor-joining analy- ses were performed on nuclear genes of the 18S, 5.8S, 28S and internal transcribed spacer (ITS) 1 ribo- somal RNA and the translation elongation factor 1 alpha (tef ) and beta tubulin (βtub) nucleotide sequences. -
First Report of Albifimbria Verrucaria and Deconica Coprophila (Syn: Psylocybe Coprophila) from Field Soil in Korea
The Korean Journal of Mycology www.kjmycology.or.kr RESEARCH ARTICLE First Report of Albifimbria verrucaria and Deconica coprophila (Syn: Psylocybe coprophila) from Field Soil in Korea 1 1 1 1 1 Sun Kumar Gurung , Mahesh Adhikari , Sang Woo Kim , Hyun Goo Lee , Ju Han Jun 1 2 1,* Byeong Heon Gwon , Hyang Burm Lee , and Youn Su Lee 1 Division of Biological Resource Sciences, Kangwon National University, Chuncheon 24341, Korea 2 Divison of Food Technology, Biotechnology and Agrochemistry, College of Agriculture and Life Sciences, Chonnam National University, Gwangju 61186, Korea *Corresponding author: [email protected] ABSTRACT During a survey of fungal diversity in Korea, two fungal strains, KNU17-1 and KNU17-199, were isolated from paddy field soil in Yangpyeong and Sancheong, respectively, in Korea. These fungal isolates were analyzed based on their morphological characteristics and the molecular phylogenetic analysis of the internal transcribed spacer (ITS) rDNA sequences. On the basis of their morphology and phylogeny, KNU17-1 and KNU17-199 isolates were identified as Albifimbria verrucaria and Deconica coprophila, respectively. To the best of our knowledge, A. verrucaria and D. coprophila have not yet been reported in Korea. Thus, this is the first report of these species in Korea. Keywords: Albifimbria verrucaria, Deconica coprophila, Morphology OPEN ACCESS INTRODUCTION pISSN : 0253-651X The genus Albifimbria L. Lombard & Crous 2016 belongs to the family Stachybotryaceae of Ascomycotic eISSN : 2383-5249 fungi. These fungi are characterized by verrucose setae and conidia bearing a funnel-shaped mucoidal Kor. J. Mycol. 2019 September, 47(3): 209-18 https://doi.org/10.4489/KJM.20190025 appendage [1]. -
<I>Mucorales</I>
Persoonia 30, 2013: 57–76 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158513X666259 The family structure of the Mucorales: a synoptic revision based on comprehensive multigene-genealogies K. Hoffmann1,2, J. Pawłowska3, G. Walther1,2,4, M. Wrzosek3, G.S. de Hoog4, G.L. Benny5*, P.M. Kirk6*, K. Voigt1,2* Key words Abstract The Mucorales (Mucoromycotina) are one of the most ancient groups of fungi comprising ubiquitous, mostly saprotrophic organisms. The first comprehensive molecular studies 11 yr ago revealed the traditional Mucorales classification scheme, mainly based on morphology, as highly artificial. Since then only single clades have been families investigated in detail but a robust classification of the higher levels based on DNA data has not been published phylogeny yet. Therefore we provide a classification based on a phylogenetic analysis of four molecular markers including the large and the small subunit of the ribosomal DNA, the partial actin gene and the partial gene for the translation elongation factor 1-alpha. The dataset comprises 201 isolates in 103 species and represents about one half of the currently accepted species in this order. Previous family concepts are reviewed and the family structure inferred from the multilocus phylogeny is introduced and discussed. Main differences between the current classification and preceding concepts affects the existing families Lichtheimiaceae and Cunninghamellaceae, as well as the genera Backusella and Lentamyces which recently obtained the status of families along with the Rhizopodaceae comprising Rhizopus, Sporodiniella and Syzygites. Compensatory base change analyses in the Lichtheimiaceae confirmed the lower level classification of Lichtheimia and Rhizomucor while genera such as Circinella or Syncephalastrum completely lacked compensatory base changes. -
DNA Barcoding in <I>Mucorales</I>: an Inventory of Biodiversity
UvA-DARE (Digital Academic Repository) DNA barcoding in Mucorales: an inventory of biodiversity Walther, G.; Pawłowska, J.; Alastruey-Izquierdo, A.; Wrzosek, W.; Rodriguez-Tudela, J.L.; Dolatabadi, S.; Chakrabarti, A.; de Hoog, G.S. DOI 10.3767/003158513X665070 Publication date 2013 Document Version Final published version Published in Persoonia - Molecular Phylogeny and Evolution of Fungi Link to publication Citation for published version (APA): Walther, G., Pawłowska, J., Alastruey-Izquierdo, A., Wrzosek, W., Rodriguez-Tudela, J. L., Dolatabadi, S., Chakrabarti, A., & de Hoog, G. S. (2013). DNA barcoding in Mucorales: an inventory of biodiversity. Persoonia - Molecular Phylogeny and Evolution of Fungi, 30, 11-47. https://doi.org/10.3767/003158513X665070 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:29 Sep 2021 Persoonia 30, 2013: 11–47 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158513X665070 DNA barcoding in Mucorales: an inventory of biodiversity G. -
Molecular Identification of Fungi
Molecular Identification of Fungi Youssuf Gherbawy l Kerstin Voigt Editors Molecular Identification of Fungi Editors Prof. Dr. Youssuf Gherbawy Dr. Kerstin Voigt South Valley University University of Jena Faculty of Science School of Biology and Pharmacy Department of Botany Institute of Microbiology 83523 Qena, Egypt Neugasse 25 [email protected] 07743 Jena, Germany [email protected] ISBN 978-3-642-05041-1 e-ISBN 978-3-642-05042-8 DOI 10.1007/978-3-642-05042-8 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2009938949 # Springer-Verlag Berlin Heidelberg 2010 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilm or in any other way, and storage in data banks. Duplication of this publication or parts thereof is permitted only under the provisions of the German Copyright Law of September 9, 1965, in its current version, and permission for use must always be obtained from Springer. Violations are liable to prosecution under the German Copyright Law. The use of general descriptive names, registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Cover design: WMXDesign GmbH, Heidelberg, Germany, kindly supported by ‘leopardy.com’ Printed on acid-free paper Springer is part of Springer Science+Business Media (www.springer.com) Dedicated to Prof. Lajos Ferenczy (1930–2004) microbiologist, mycologist and member of the Hungarian Academy of Sciences, one of the most outstanding Hungarian biologists of the twentieth century Preface Fungi comprise a vast variety of microorganisms and are numerically among the most abundant eukaryotes on Earth’s biosphere. -
Los Hongos Agaricales De Las Áreas De Encino Del Estado De Baja California, México Nahara Ayala-Sánchez Universidad Autónoma De Baja California
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Estudios en Biodiversidad Parasitology, Harold W. Manter Laboratory of 2015 Los hongos Agaricales de las áreas de encino del estado de Baja California, México Nahara Ayala-Sánchez Universidad Autónoma de Baja California Irma E. Soria-Mercado Universidad Autónoma de Baja California Leticia Romero-Bautista Universidad Autónoma del Estado de Hidalgo Maritza López-Herrera Universidad Autónoma del Estado de Hidalgo Roxana Rico-Mora Universidad Autónoma de Baja California See next page for additional authors Follow this and additional works at: http://digitalcommons.unl.edu/biodiversidad Part of the Biodiversity Commons, Botany Commons, and the Terrestrial and Aquatic Ecology Commons Ayala-Sánchez, Nahara; Soria-Mercado, Irma E.; Romero-Bautista, Leticia; López-Herrera, Maritza; Rico-Mora, Roxana; and Portillo- López, Amelia, "Los hongos Agaricales de las áreas de encino del estado de Baja California, México" (2015). Estudios en Biodiversidad. 19. http://digitalcommons.unl.edu/biodiversidad/19 This Article is brought to you for free and open access by the Parasitology, Harold W. Manter Laboratory of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Estudios en Biodiversidad by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Authors Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Leticia Romero-Bautista, Maritza López-Herrera, Roxana Rico-Mora, and Amelia Portillo-López This article is available at DigitalCommons@University of Nebraska - Lincoln: http://digitalcommons.unl.edu/biodiversidad/19 Los hongos Agaricales de las áreas de encino del estado de Baja California, México Nahara Ayala-Sánchez, Irma E. Soria-Mercado, Leticia Romero-Bautista, Maritza López-Herrera, Roxana Rico-Mora, y Amelia Portillo-López Resumen Se realizó una recopilación de las especies de hongos del orden Agaricales (regionalmente conocido como “agaricoides”) de los bosques Quercus spp. -
Thesis FINAL PRINT
Preface This study was conducted at the Department of Chemistry, Biotechnology and Food Science (IKBM), Norwegian University of Life Sciences (UMB) during November 2009 to November 2010. My supervisors were Professor Dr Arne Tronsmo and PhD student Md. Hafizur Rahman, Department of IKBM, UMB. I express my sincere appreciation and gratitude to Professor Arne Tronsmo and Dr. Linda Gordon Hjeljord for their dynamic guidance throughout the period of the study, constant encouragement, constructive criticism and valuable suggestion during preparation of the thesis. I also want to thank Md. Hafizur Rahman for his guidance during my research work. Moreover I express my sincere gratitude to Grethe Kobro and Else Maria Aasen and all other staffs and workers at IKBM, UMB for their helpful co-operation to complete the research work in the laboratory. Last but not the least; I feel the heartiest indebtedness to Sabine and my family members for their patient inspirations, sacrifices and never ending encouragement. Ås, January 2011 Latifur Rahman Shovan i Abstract This thesis has been focused on methods to control diseases caused by Botrytis cinerea. B. cinerea causes grey mould disease of strawberry and chickpea, as well as many other plants. The fungal isolates used were isolated from chickpea leaf (Gazipur, Bangladesh) or obtained from the Norwegian culture collections of Bioforsk (Ås) and IKBM (UMB). Both morphological and molecular characterization helped to identify the fungal isolates as Botrytis cinerea (B. cinerea 101 and B. cinerea-BD), Trichoderma atroviride, T. asperellum Alternaria brassicicola, and Mucor piriformis. The identity of one fungal isolate, which was obtained from the culture collection of Bioforsk under the name Microdochium majus, could not be confirmed in this study. -
Mantar Dergisi
11 6845 - Volume: 20 Issue:1 JOURNAL - E ISSN:2147 - April 20 e TURKEY - KONYA - FUNGUS Research Center JOURNAL OF OF JOURNAL Selçuk Selçuk University Mushroom Application and Selçuk Üniversitesi Mantarcılık Uygulama ve Araştırma Merkezi KONYA-TÜRKİYE MANTAR DERGİSİ E-DERGİ/ e-ISSN:2147-6845 Nisan 2020 Cilt:11 Sayı:1 e-ISSN 2147-6845 Nisan 2020 / Cilt:11/ Sayı:1 April 2020 / Volume:11 / Issue:1 SELÇUK ÜNİVERSİTESİ MANTARCILIK UYGULAMA VE ARAŞTIRMA MERKEZİ MÜDÜRLÜĞÜ ADINA SAHİBİ PROF.DR. GIYASETTİN KAŞIK YAZI İŞLERİ MÜDÜRÜ DR. ÖĞR. ÜYESİ SİNAN ALKAN Haberleşme/Correspondence S.Ü. Mantarcılık Uygulama ve Araştırma Merkezi Müdürlüğü Alaaddin Keykubat Yerleşkesi, Fen Fakültesi B Blok, Zemin Kat-42079/Selçuklu-KONYA Tel:(+90)0 332 2233998/ Fax: (+90)0 332 241 24 99 Web: http://mantarcilik.selcuk.edu.tr http://dergipark.gov.tr/mantar E-Posta:[email protected] Yayın Tarihi/Publication Date 27/04/2020 i e-ISSN 2147-6845 Nisan 2020 / Cilt:11/ Sayı:1 / / April 2020 Volume:11 Issue:1 EDİTÖRLER KURULU / EDITORIAL BOARD Prof.Dr. Abdullah KAYA (Karamanoğlu Mehmetbey Üniv.-Karaman) Prof.Dr. Abdulnasır YILDIZ (Dicle Üniv.-Diyarbakır) Prof.Dr. Abdurrahman Usame TAMER (Celal Bayar Üniv.-Manisa) Prof.Dr. Ahmet ASAN (Trakya Üniv.-Edirne) Prof.Dr. Ali ARSLAN (Yüzüncü Yıl Üniv.-Van) Prof.Dr. Aysun PEKŞEN (19 Mayıs Üniv.-Samsun) Prof.Dr. A.Dilek AZAZ (Balıkesir Üniv.-Balıkesir) Prof.Dr. Ayşen ÖZDEMİR TÜRK (Anadolu Üniv.- Eskişehir) Prof.Dr. Beyza ENER (Uludağ Üniv.Bursa) Prof.Dr. Cvetomir M. DENCHEV (Bulgarian Academy of Sciences, Bulgaristan) Prof.Dr. Celaleddin ÖZTÜRK (Selçuk Üniv.-Konya) Prof.Dr. Ertuğrul SESLİ (Trabzon Üniv.-Trabzon) Prof.Dr.