Endoplasmic Reticulum and Autophagy in Rat Hepatocytes (Lysosomes/Electron Microscopy/Liver) ALEX B
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Common Features of All Cells Bacterial
www.denniskunkel.com Tour of the Cell part 1 Today’s Topics • Finish Nucleic Acids Cells • Properties of all cells – Prokaryotes and Eukaryotes • Functions of Major Cellular Organelles – Information – Synthesis&Transport – Energy Conversion – Recycling – Structure and Movement Bacterial cell Animal Cell 9/12/12 (Prokaryote) (Eukaryote) 2 www.denniskunkel.com Common features of all cells • Plasma Membrane – defines inside from outside • Cytosol – Semifluid “inside” of the cell • DNA “chromosomes” - Genetic material – hereditary instructions • Ribosomes – “factories” to synthesize proteins 4 Plasma membrane Bacterial (Prokaryotic) Cell Ribosomes! Plasma membrane! Bacterial Cell wall! chromosome ! Phospholipid bilayer Proteins 0.5 !m! Flagella! No internal membranes 5 6 1 Figure 6.2b 1 cm Eukaryotic Cell Frog egg 1 mm Human egg 100 µm Most plant and animal cells 10 m µ Nucleus Most bacteria Light microscopy Mitochondrion 1 µm Super- 100 nm Smallest bacteria Viruses resolution microscopy Ribosomes 10 nm Electron microscopy Proteins Lipids 1 nm Small molecules Contains internal organelles 7 0.1 nm Atoms endoplasmicENDOPLASMIC RETICULUM reticulum (ER) ENDOPLASMIC RETICULUM (ER) NUCLEUS NUCLEUS Rough ER Smooth ER nucleus Rough ER Smooth ER Nucleus Plasma membrane Plasma membrane Centrosome Centrosome cytoskeletonCYTOSKELETON CYTOSKELETON Microfilaments You should Microfilaments Intermediate filaments know everything Intermediate filaments Microtubules in Fig 6.9 ribosomesRibosomes Microtubules Ribosomes cytosol GolgiGolgi apparatus apparatus Golgi apparatus Peroxisome Peroxisome In animal cells but not plant cells: In animal cells but not plant cells: Lysosome Lysosomes Lysosome Lysosomes Figure 6.9 Centrioles Figure 6.9 Centrioles Mitochondrion lysosome Flagella (in some plant 9sperm) Mitochondrion Flagella (in some plant10 sperm) mitochondrion Nuclear envelope Nucleus Nucleus 1 !m Nucleolus Chromatin Nuclear envelope: Inner membrane Outer membrane Pores Pore complex Rough ER Surface of nuclear envelope. -
Ultrastructural Studies in Fetal I-Cell Disease
Pediat. Res. 10: 669-676 (1976) Amniocentesis fetal I-cell disease cytoplasmic inclusions fetus Ultrastructural Studies in Fetal I-cell Disease KAZUHIRO ABE, ICHIRO MATSUDA, SHINICHIRO ARASHIMA(20' TAKASHI MITSUYAMA, YOGO OKA, AND MUTSUO ISHIKAWA Departments of Anatomy, Pediatrics, and Obstetrics and Gynecology, Hokkaido University School of Medicine, Sapporo, Japan Extract I-cells from the present fetus were described in separate papers (9, 1 1 ). The skin, brain, lung, liver, and kidney from a 20-week-old fetus who was diagnosed as having fetal I-cell disease by amniocentesis at MATERIALS AND METHODS 14 weeks of gestation were examined by light and electron microscopy. In addition, cultured fibroblasts from the skin were also A pregnancy of a 21-year-old mother from a family at risk for observed microscopically. Cytoplasmic inclusions with dense poly - I-cell disease was monitored and the diagnosis of the disease was morphic contents appeared commonly in the capillary endothelial made by biochemical examination of the amniotic fluid and cells cells in the skin, lung, glomerulus of the kidney, and the epithelial obtained at 14 weeks of gestation (9). The pregnancy was cells of the proximal tubules of the kidney, and sometimes in the interrupted by therapeutic abortion at 20 weeks of gestation. The hepatocytes of the liver and the nerve and glial cells of the brain. aborted fetus was male, 160 g in weight. and revealed macroscopi- Erythropoietic cells in the liver and circulating erythrocytes con- cally normal development corresponding to the fetal age. tained dense inclusions varying in developmental stages. Fibroblasts Immediately after the abortion, tissue fragments of the abdomi- of the skin had several clear vacuoles, and cultured fibroblasts were nal skin, brain, lung, liver, and kidney from the fetus were filled with dense inclusions. -
Phosphatases and Differentiation of the Golgi Apparatus
J. Cell Sci. 4, 455-497 (1969) 455 Printed in Great Britain PHOSPHATASES AND DIFFERENTIATION OF THE GOLGI APPARATUS MARIANNE DAUWALDER, W. G. WHALEY AND JOYCE E. KEPHART The Cell Research Institute, Tlie University of Texas at Austin, Texas, U.S.A. SUMMARY Cytochemical techniques for the electron microscopic localization of inosine diphosphatase, thiamine pyrophosphatase, and acid phosphatase have been applied to the developing root tip of Zea mays. Following formaldehyde fixation the Golgi apparatus of most of the cells showed reaction specificity for IDPase and TPPase. Following glutaraldehyde fixation marked localiza- tion of IDPase reactivity in the Golgi apparatus was limited to the root cap, the epidermis, and the phloem. A parallelism was apparent between the sequential morphological development of the apparatus for the secretion of a polysaccharide product, the fairly direct incorporation of tritiated glucose into the apparatus to become a component of this product and the develop- ment of the enzyme reactivity. Acid phosphatase, generally accepted as a lysosomal marker, was found in association with the Golgi apparatus in only a few cell types near the apex of the root. The localization was usually in a single cisterna at the face of the apparatus toward which the production of secretory vesicles builds up and associated regions of what may be smooth endoplasmic reticulum. Since the cell types involved were limited regions of the cap and epidermis and some initial cells, no functional correlates of the reactivity were apparent. Despite the presence of this lysosomal marker, no structures clearly identifiable as ' lysosomes' were found and the lack of reaction specificity in the vacuoles did not allow them to be so defined. -
Essential Function of the Alveolin Network in the Subpellicular
RESEARCH ARTICLE Essential function of the alveolin network in the subpellicular microtubules and conoid assembly in Toxoplasma gondii Nicolo` Tosetti1, Nicolas Dos Santos Pacheco1, Eloı¨se Bertiaux2, Bohumil Maco1, Lore` ne Bournonville2, Virginie Hamel2, Paul Guichard2, Dominique Soldati-Favre1* 1Department of Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Geneva, Switzerland; 2Department of Cell Biology, Sciences III, University of Geneva, Geneva, Switzerland Abstract The coccidian subgroup of Apicomplexa possesses an apical complex harboring a conoid, made of unique tubulin polymer fibers. This enigmatic organelle extrudes in extracellular invasive parasites and is associated to the apical polar ring (APR). The APR serves as microtubule- organizing center for the 22 subpellicular microtubules (SPMTs) that are linked to a patchwork of flattened vesicles, via an intricate network composed of alveolins. Here, we capitalize on ultrastructure expansion microscopy (U-ExM) to localize the Toxoplasma gondii Apical Cap protein 9 (AC9) and its partner AC10, identified by BioID, to the alveolin network and intercalated between the SPMTs. Parasites conditionally depleted in AC9 or AC10 replicate normally but are defective in microneme secretion and fail to invade and egress from infected cells. Electron microscopy revealed that the mature parasite mutants are conoidless, while U-ExM highlighted the disorganization of the SPMTs which likely results in the catastrophic loss of APR and conoid. Introduction *For correspondence: Toxoplasma gondii belongs to the phylum of Apicomplexa that groups numerous parasitic protozo- Dominique.Soldati-Favre@unige. ans causing severe diseases in humans and animals. As part of the superphylum of Alveolata, the ch Apicomplexa are characterized by the presence of the alveoli, which consist in small flattened single- membrane sacs, underlying the plasma membrane (PM) to form the inner membrane complex (IMC) Competing interest: See of the parasite. -
Written Response #5
Written Response #5 • Draw and fill in the chart below about three different types of cells: Written Response #6-18 • In this true/false activity: • You and your partner will discuss the question, each of you will record your response and share your answer with the class. Be prepared to justify your answer. • You are allow to search answers. • You will be limited to 20 seconds per question. Written Response #6-18 6. The water-hating hydrophobic tails of the phospholipid bilayer face the outside of the cell membrane. 7. The cytoplasm essentially acts as a “skeleton” inside the cell. 8. Plant cells have special structures that are not found in animal cells, including a cell wall, a large central vacuole, and plastids. 9. Centrioles help organize chromosomes before cell division. 10. Ribosomes can be found attached to the endoplasmic reticulum. Written Response #6-18 11. ATP is made in the mitochondria. 12. Many of the biochemical reactions of the cell occur in the cytoplasm. 13. Animal cells have chloroplasts, organelles that capture light energy from the sun and use it to make food. 14. Small hydrophobic molecules can easily pass through the plasma membrane. 15. In cell-level organization, cells are not specialized for different functions. Written Response #6-18 16. Mitochondria contains its own DNA. 17. The plasma membrane is a single phospholipid layer that supports and protects a cell and controls what enters and leaves it. 18. The cytoskeleton is made from thread-like filaments and tubules. 3.2 HW 1. Describe the composition of the plasma membrane. -
A Role for Crinophagy in Pancreatic Islet B-Cells Minireview Based on a Doctoral Thesis
Upsala J Med Sci 92: 99-1 13, 1987 A Role for Crinophagy in Pancreatic Islet B-cells Minireview based on a doctoral thesis Annika Schnell Landstrom Department of Medical Cell Biology, Uppsala University, Uppsala, Sweden INTRODUCTORY REMARKS ON LYSOSOMES The lysosomes were first observed by Christian de Duve and his collaborators in December 1949 as "a cryptic form of latent acid phosphatase" (18). This observation lead to the suggestion that the enzyme could be located in a distinct group of subcellular granules, segregated from the rest of the cell by a limiting membrane. Further studies showed that these granules contained a number of acid hydrolases. The granules or bodies were thus supposed to have lytic properties and they were named lysosomes (18, 19). Soon after the discovery of the lysosome its role in cellular events such as intracellular digestion and phagocytosis was established. The presence of acid hydrolases, primarily acid phosphatase, as evidenced by enzyme cytochemistry, was the main criterium for morphological identification of a lysosome. In 1966 de Duve and Wattiaux (20) suggested a nomenclature for the lysosomal system, based in part on morphological criteria but mainly on the known functions of the lysosomes (Fig. 1). At that time the existence of some of the lysosomal particles was still under debate. The concept of primary lyso- somes, which had not yet taken part in intracellular degradation, was thus proposed. Lysosomes which had been involved in some kind of degradation were named secondary lysosomes. Depending on whether the secondary lysosomes were supposed to have been involved in either autophagy, i.e. -
Studies on the Mechanisms of Autophagy: Formation of the Autophagic Vacuole W
Studies on the Mechanisms of Autophagy: Formation of the Autophagic Vacuole W. A. Dunn, Jr. Department of Anatomy and Cell Biology, University of Florida College of Medicine, Gainesville, Florida 32610 Abstract. Autophagic vacuoles form within 15 min of tophagic vacuoles. All these results suggested that au- perfusing a liver with amino acid-depleted medium. tophagic vacuoles were not formed from plasma mem- These vacuoles are bound by a "smooth" double mem- brane, Golgi apparatus, or endosome constituents. An- brane and do not contain acid phosphatase activity. In tisera prepared against integral membrane proteins (14, Downloaded from http://rupress.org/jcb/article-pdf/110/6/1923/1059547/1923.pdf by guest on 26 September 2021 an attempt to identify the membrane source of these 25, and 40 kD) of the RER was found to label the in- vacuoles, I have used morphological techniques com- ner and outer limiting membranes of almost all na- bined with immunological probes to localize specific scent autophagic vacuoles. In addition, ribophorin II membrane antigens to the limiting membranes of was identified at the limiting membranes of many na- newly formed or nascent autophagic vacuoles. Anti- scent autophagic vacuoles. Finally, secretory proteins, bodies to three integral membrane proteins of the rat serum albumin and alpha2o-globulin, were localized plasma membrane (CE9, HA4, and epidermal growth to the lumen of the RER and to the intramembrane factor receptor) and one of the Golgi apparatus space between the inner and outer membranes of some (sialyltransferase) did not label these vacuoles. Inter- of these vacuoles. The results were consistent with the nalized epidermal growth factor and its membrane formation of autophagic vacuoles from ribosome-free receptor were not found in nascent autophagic vacu- regions of the RER. -
Golgi-Apparatus.Pdf
GOLGI APPARATUS Cell Biology/B. Sc. Part III By: Dr. Bibha Kumari Dept. of Zoology Magadh Mahila College, Patna Email: [email protected] Golgi Apparatus • The Golgi apparatus (GA), also called Golgi body or Golgi complex and • found universally in both plant and animal cells, • is typically comprised of a series of five to eight cup- shaped, membrane-covered sacs called cisternae that look something like a stack of deflated balloons. • It is another packaging organelle like the endoplasmic reticulum (ER). It was named after Camillo Golgi (1897), an Italian biologist. • While layers of membranes may look like the rough ER, they have a very different function. Golgi….. • In some unicellular flagellates, however, as many as 60 cisternae may combine to make up the Golgi apparatus. • Similarly, the number of Golgi bodies in a cell varies according to its function. • Animal cells generally contain between ten and twenty Golgi stacks per cell, which are linked into a single complex by tubular connections between cisternae. • This complex is usually located close to the cell nucleus. Position in the cell Structure of Golgi Apparatus • A Golgi apparatus is composed of flat sacs known as cisternae. • The sacs are stacked in a bent, semicircular shape. • Each stacked grouping has a membrane that separates its insides from the cell's cytoplasm. • Golgi membrane protein interactions are responsible for their unique shape. • These interactions generate the force that shapes this organelle. Structure…. Structure…. Structure…… • The Golgi apparatus is very polar. • Membranes at one end of the stack differ in both composition and in thickness from those at the other end. -
Dynamics of Ribosome Association with the Endoplasmic Reticulum Membrane
Dynamics of Ribosome Association with the Endoplasmic Reticulum Membrane Dissertation zur Erlangung des Doktorgrades der Fakultaet fuer Biologie der Ludwig-Maximilians-Universitaet Muenchen vorgelegt von Dipl.-Biochem. Julia Schaletzky Mai 2006 Die vorliegende Arbeit wurde an der Harvard Medical School in Boston, MA (USA) unter der Anleitung von Prof. Tom Rapoport durchgefuehrt. Die dreidimensionale Struktur der von mir isolierten Komplexe wurde in Kollaboration mit Prof. Chris Akey (Boston University, USA) unter Anleitung von Dr. Jean-François Ménétret durch Cryo-Elektronenmikroskopie ermittelt. Die vorliegende Arbeit wurde zur Beurteilung eingereicht am 01.06.2006. Gutachter: Prof. Dr. J. Soll PD Dr. E. Schleiff Prof. Dr. M. Hayashi Prof. Dr. K. Jung Rigorosum: 20.09.2006 Ehrenwoertliche Versicherung Hiermit versichere ich, dass ich die vorliegende Arbeit selbstaendig verfasst und keine anderen als die von mir angegebenen Quellen und Hilfsmittel verwendet habe. Ferner erklaere ich, dass ich anderweitig nicht versucht habe, eine Dissertation einzureichen oder mich einer Doktorpruefung zu unterziehen. Die vorliegende Arbeit ist nicht als Ganzes oder in Teilen einer weiteren Pruefungskommission vorgelegt worden. Boston, 12.05.06 ........................................ (Julia Schaletzky) ACKNOWLEDGEMENTS I would like to thank Prof. Tom Rapoport for his continuing support and advice during the supervision of my project, and for being a great teacher and mentor. I would like to express my gratitude to Prof. Juergen Soll for generously agreeing to be my advisor and to lead my PhD committee. Prof. Stefan Jentsch deserves thanks for agreeing to examine my PhD thesis and for his constant support and help during the pursuit of my PhD. I am also grateful to Prof. -
Lysosomes, Smooth Endoplasmic Reticulum, Mitochondria, And
Undergraduate – Graduate 4. Lysosomes, Smooth Histology Lecture Series Endoplasmic Reticulum, Larry Johnson, Professor Veterinary Integrative Biosciences Mitochondria, and Inclusions Texas A&M University College Station, TX 77843 Objective Lysosomal ultrastructure and function/dysfunction along with continued discussion on protein sorting and protein targeting Smooth endoplasmic reticulum ultrastructure and function in typical cells and those specialized to secrete steroids Mitochondrial ultrastructure, function, origin, and incorporation of cytoplasmic proteins Inclusions Ribosomes translate mRNA in the production of protein. SER Reactions • Scaler reactions Cytosolic proteins a + b = c • Vectorial reactions a + b = c membranes RER proteins • Cytosol is the part of the cytoplasm that is not held by any of the organelles in the cell. On the other hand, cytoplasm is the part of the cell which is contained within the entire cell membrane. • Cytoplasm is cytosol plus organelles = every thing between the cell membrane and the nuclear envelope Cytosolic proteins RER proteins Scaler reactions Vectorial reactions Lysosome Ultrastructure Secondary lysosomes Lysosome Enzymes present - phosphatases, proteases, nucleases, lipid degrading enzymes Lysosome Method of detection - localization of enzymes as primary lysosomes look like secretory granules Histochemical reaction using the local enzyme plus substrate to produce black precititate Localization of lysosomal enzymes Lysosome Negative charges on inner leaflet of lysosomal membrane - protect from -
Membrane Structure and Function
Chapter 7 Membrane Structure and Function Lecture Outline Overview: Life at the Edge • The plasma membrane separates the living cell from its surroundings. • This thin barrier, 8 nm thick, controls traffic into and out of the cell. • Like all biological membranes, the plasma membrane is selectively permeable, allowing some substances to cross more easily than others. • The formation of a membrane that encloses a solution different from the surrounding solution while still permitting the uptake of nutrients and the elimination of waste products was a key event in the evolution of life. • The ability of the cell to discriminate in its chemical exchanges with its environment is fundamental to life. • It is the plasma membrane and its component molecules that make this selectivity possible. Concept 7.1 Cellular membranes are fluid mosaics of lipids and proteins. • The main macromolecules in membranes are lipids and proteins, but carbohydrates are also important. • The most abundant lipids are phospholipids. • Phospholipids and most other membrane constituents are amphipathic molecules, which have both hydrophobic and hydrophilic regions. Membrane models have evolved to fit new data. • The arrangement of phospholipids and proteins in biological membranes is described by the fluid mosaic model. • In this model, the membrane is a fluid structure with a “mosaic” of various proteins embedded in or attached to a double layer (bilayer) of phospholipids. • Models of membranes were developed long before membranes were first seen with electron microscopes in the 1950s. • In 1915, membranes isolated from red blood cells were chemically analyzed and found to be composed of lipids and proteins. • In 1925, E. -
The Role of the Cytoskeleton in the Structure and Function of the Golgi Apparatus Gustavo Egea and Rosa M
The role of the cytoskeleton in the structure and function of GA * 1 The role of the cytoskeleton in the structure and function of the Golgi apparatus Gustavo Egea and Rosa M. Ríos Introduction Cellular organelles in mammalian cells are individualized membrane entities that often become spherical. The endoplasmic reticulum (ER) and the Golgi apparatus (GA) are exceptions to this rule, as they are respectively made up of a continuous tubular network and a pile of flat disks. Their unique shapes are regulated by molecular elements (Kepes et al. 2005; Levine and Rabouille 2005), including the cytoskeleton. All cytoskeletal elements, together with cytoskeleton-associated motors and non-motor proteins, have a role in the subcellular positioning, biogenesis and function of most organelles, being particularly relevant in the GA. The GA is the central organelle of the eukaryotic secretory pathway. While its basic function is highly conserved, the GA varies greatly in shape and number from one organism to another. In the simplest organisms like budding yeast Saccharomyces cerevisiae, the organelle takes the form of dispersed cisternae or isolated tubular networks (Preuss et al. 1992; Ram- bourg et al. 2001). Unicellular green alga (Henderson et al. 2007) and many protozoa like Toxoplasma gondii (Pelletier et al. 2002) and Trypanosoma brucei (He 2007; He et al. 2004) contain a single pile of flattened cisternae aligned in parallel. The organization of the GA in this manner is referred to as a Golgi stack, which usually contains two regions: one central and poorly fenestrated (compact) and other lateral and highly fenestrated (non-com- pact) (Kepes et al.