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Final Report Characterization of Commercial Reef Fish Catch And
SEDAR 15-RD07 Final Report Characterization of commercial reef fish catch and bycatch off the southeast coast of the United States. CRP Grant No. NA03NMF4540416 Funding amount: $100,000 Federal $4,130 Match Patrick J. Harris and Jessica Stephen Marine Resources Research Institute South Carolina Department of Natural Resources 217 Fort Johnson Road P.O. Box 12559 Charleston, SC 29412 I. Characterization of commercial reef fish catch and bycatch off the southeast coast of the United States. Patrick J. Harris, South Carolina Department of Natural Resources, Charleston, SC 29412. Grant Number: NA03NMF4540416 July 2005. II. Abstract There is clearly a need to characterize the entire catch of commercial fishermen and compare differences in abundance and species diversity to what is caught in fishery-independent gear. As we move towards a multi-species management approach, these types of data are essential. In addition, estimates of release mortality are needed for stock assessments but currently this is not being measured for fishery-dependent data. Many reef fishes captured at depths greater than ~ 20 m often have problems submerging when released by commercial fishermen. The goal of the research project was to characterize the entire (retained and discarded) catch of reef fishes from a selected commercial fisherman including total catch composition and disposition of fishes that were released. During April- November 2004, Captain Mark Marhefka dedicated one fishing trip (5-7 day duration) each month to the collection of fishery-dependent data. Date, location and collection number were recorded for each site fished by Captain Marhefka using a PDA equipped with a GPS. -
RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected]
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 6-25-2014 RNA Detection Technology for Applications in Marine Science: Microbes to Fish Robert Michael Ulrich University of South Florida, [email protected] Follow this and additional works at: https://scholarcommons.usf.edu/etd Part of the Biology Commons, and the Molecular Biology Commons Scholar Commons Citation Ulrich, Robert Michael, "RNA Detection Technology for Applications in Marine Science: Microbes to Fish" (2014). Graduate Theses and Dissertations. https://scholarcommons.usf.edu/etd/5321 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. RNA Detection Technology for Applications in Marine Science: Microbes to Fish by Robert M. Ulrich A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy College of Marine Science University of South Florida Major Professor: John H. Paul, Ph.D. Valerie J. Harwood, Ph.D. Mya Breitbart, Ph.D. Christopher D. Stallings, Ph.D. David E. John, Ph.D. Date of Approval June 25, 2014 Keywords: NASBA, grouper, Karenia mikimotoi, Enterococcus Copyright © 2014, Robert M. Ulrich DEDICATION This dissertation is dedicated to my fiancée, Dr. Shannon McQuaig for inspiring my return to graduate school and her continued support over the last four years. On no other porch in our little town have there been more impactful scientific discussions, nor more words of encouragement. ACKNOWLEDGMENTS I gratefully acknowledge the many people who have encouraged and advised me throughout my graduate studies. -
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e · ~ e t · aI ' A Field Guide to Grouper and Snapper Fishes of Andaman and Nicobar Islands (Family: SERRANIDAE, Subfamily: EPINEPHELINAE and Family: LUTJANIDAE) P. T. RAJAN Andaman & Nicobar Regional Station Zoological Survey of India Haddo, Port Blair - 744102 Edited by the Director, Zoological Survey of India, Kolkata Zoological Survey of India Kolkata CITATION Rajan, P. T. 2001. Afield guide to Grouper and Snapper Fishes of Andaman and Nicobar Islands. (Published - Director, Z.5.1.) Published : December, 2001 ISBN 81-85874-40-9 Front cover: Roving Coral Grouper (Plectropomus pessuliferus) Back cover : A School of Blue banded Snapper (Lutjanus lcasmira) © Government of India, 2001 ALL RIGHTS RESERVED • No part of this publication may be reproduced, stored in a retrieval system or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise without the prior permission of the publisher. • This book is sold subject to the condition that it shall not, by way of trade, be lent, re-sold, hired out or otherwise disposed of without the publisher'S consent, in any form of binding or cover other than that in which it is published. • The correct price of this publication is the price printed on this page. Any revised price indicated by a rubber stamp or by a sticker or by any other means is incorrect and should be unacceptable. PRICE Indian Rs. 400.00 Foreign $ 25; £ 20 Published at the Publication Division by the Director, Zoological Survey of India, 234/4, AJe Bose Road, 2nd MSO Building, (13th Floor), Nizam Palace, Calcutta-700 020 after laser typesetting by Computech Graphics, Calcutta 700019 and printed at Power Printers, New Delhi - 110002. -
Diet Composition of Juvenile Black Grouper (Mycteroperca Bonaci) from Coastal Nursery Areas of the Yucatán Peninsula, Mexico
BULLETIN OF MARINE SCIENCE, 77(3): 441–452, 2005 NOTE DIET COMPOSITION OF JUVENILE BLACK GROUPER (MYCTEROPERCA BONACI) FROM COASTAL NURSERY AREAS OF THE YUCATÁN PENINSULA, MEXICO Thierry Brulé, Enrique Puerto-Novelo, Esperanza Pérez-Díaz, and Ximena Renán-Galindo Groupers (Epinephelinae, Epinephelini) are top-level predators that influence the trophic web of coral reef ecosystems (Parrish, 1987; Heemstra and Randall, 1993; Sluka et al., 2001). They are demersal mesocarnivores and stalk and ambush preda- tors that sit and wait for larger moving prey such as fish and mobile invertebrates (Cailliet et al., 1986). Groupers contribute to the ecological balance of complex tropi- cal hard-bottom communities (Sluka et al., 1994), and thus large changes in their populations may significantly alter other community components (Parrish, 1987). The black grouper (Mycteroperca bonaci Poey, 1860) is an important commercial and recreational fin fish resource in the western Atlantic region (Bullock and Smith, 1991; Heemstra and Randall, 1993). The southern Gulf of Mexico grouper fishery is currently considered to be deteriorated and M. bonaci, along with red grouper (Epinephelus morio Valenciennes, 1828) and gag (Mycteroperca microlepis Goode and Bean, 1880), is one of the most heavily exploited fish species in this region (Co- lás-Marrufo et al., 1998; SEMARNAP, 2000). Currently, M. bonaci is considered a threatened species (Morris et al., 2000; IUCN, 2003) and has been classified as vul- nerable in U.S. waters because male biomass in the Atlantic dropped from 20% in 1982 to 6% in 1995 (Musick et al., 2000). The black grouper is usually found on irregular bottoms such as coral reefs, drop- off walls, and rocky ledges, at depths from 10 to 100 m (Roe, 1977; Manooch and Mason, 1987; Bullock and Smith, 1991; Heemstra and Randall, 1993). -
Snapper and Grouper: SFP Fisheries Sustainability Overview 2015
Snapper and Grouper: SFP Fisheries Sustainability Overview 2015 Snapper and Grouper: SFP Fisheries Sustainability Overview 2015 Snapper and Grouper: SFP Fisheries Sustainability Overview 2015 Patrícia Amorim | Fishery Analyst, Systems Division | [email protected] Megan Westmeyer | Fishery Analyst, Strategy Communications and Analyze Division | [email protected] CITATION Amorim, P. and M. Westmeyer. 2016. Snapper and Grouper: SFP Fisheries Sustainability Overview 2015. Sustainable Fisheries Partnership Foundation. 18 pp. Available from www.fishsource.com. PHOTO CREDITS left: Image courtesy of Pedro Veiga (Pedro Veiga Photography) right: Image courtesy of Pedro Veiga (Pedro Veiga Photography) © Sustainable Fisheries Partnership February 2016 KEYWORDS Developing countries, FAO, fisheries, grouper, improvements, seafood sector, small-scale fisheries, snapper, sustainability www.sustainablefish.org i Snapper and Grouper: SFP Fisheries Sustainability Overview 2015 EXECUTIVE SUMMARY The goal of this report is to provide a brief overview of the current status and trends of the snapper and grouper seafood sector, as well as to identify the main gaps of knowledge and highlight areas where improvements are critical to ensure long-term sustainability. Snapper and grouper are important fishery resources with great commercial value for exporters to major international markets. The fisheries also support the livelihoods and food security of many local, small-scale fishing communities worldwide. It is therefore all the more critical that management of these fisheries improves, thus ensuring this important resource will remain available to provide both food and income. Landings of snapper and grouper have been steadily increasing: in the 1950s, total landings were about 50,000 tonnes, but they had grown to more than 612,000 tonnes by 2013. -
Sedar50-Rd30
Stock Complexes for Fisheries Management in the Gulf of Mexico Nicholas A. Farmer, Richard P. Malinowski, Mary F. McGovern, and Peter J. Rubec SEDAR50-RD30 22 July 2016 Marine and Coastal Fisheries Dynamics, Management, and Ecosystem Science ISSN: (Print) 1942-5120 (Online) Journal homepage: http://www.tandfonline.com/loi/umcf20 Stock Complexes for Fisheries Management in the Gulf of Mexico Nicholas A. Farmer, Richard P. Malinowski, Mary F. McGovern & Peter J. Rubec To cite this article: Nicholas A. Farmer, Richard P. Malinowski, Mary F. McGovern & Peter J. Rubec (2016) Stock Complexes for Fisheries Management in the Gulf of Mexico, Marine and Coastal Fisheries, 8:1, 177-201, DOI: 10.1080/19425120.2015.1024359 To link to this article: http://dx.doi.org/10.1080/19425120.2015.1024359 Published with license by the American Fisheries Society© Nicholas A. Farmer, Richard P. Malinowski, Mary F. McGovern, and Peter J. Rubec Published online: 26 May 2016. Submit your article to this journal Article views: 379 View related articles View Crossmark data Citing articles: 1 View citing articles Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=umcf20 Download by: [216.215.241.165] Date: 22 July 2016, At: 08:08 Marine and Coastal Fisheries: Dynamics, Management, and Ecosystem Science 8:177–201, 2016 Published with license by the American Fisheries Society ISSN: 1942-5120 online DOI: 10.1080/19425120.2015.1024359 SPECIAL SECTION: SPATIAL ANALYSIS, MAPPING, AND MANAGEMENT OF MARINE FISHERIES Stock Complexes for Fisheries Management in the Gulf of Mexico Nicholas A. Farmer* and Richard P. -
Nassau Grouper (Epinephelus Striatus) in St. Thomas, US Virgin Islands, with Evidence for a Spawning Aggregation Site Recovery
Nassau Grouper (Epinephelus striatus) in St. Thomas, US Virgin Islands, with Evidence for a Spawning Aggregation Site Recovery ELIZABETH KADISON, RICHARD S. NEMETH, JEREMIAH BLONDEAU, TYLER SMITH, and JACQUI CALNAN Center for Marine and Environmental Studies, University of the Virgin Islands 2 John Brewers Bay, St. Thomas, United States Virgin Islands ABSTRACT The exploitation by fishing of fish spawning aggregations has caused many to disappear over the last fifty years, and has been a primary cause of dramatic stock declines of several large snapper and grouper species Caribbean-wide. In the USVI and Puerto Rico, the major Nassau grouper (Epinephelus striatus) spawning aggregation sites were fished to extinction the 1970s, and although the species is now federally protected, most sites show no signs of recovery. In 2003, Nassau grouper were found aggregating in small numbers to spawn on an offshore reef south of St. Thomas called the Grammanik Bank. The bank was seasonally, from February to May, closed to all bottom fishing beginning in 2005 due to the aggregating of the yellowfin grouper (Mycteroperca venenosa) on the site. Since 2005, increased numbers, a significantly greater mean size, and a larger size range of Nassau grouper have been documented on the bank. The fish are spatially and temporally mixed with yellowfin grouper during courtship, and it is believed this behavior may be an artifact of decreased numbers of Nassau, now using the yellowfin as surrogate aggregation members. It is doubtful that any other large Nassau grouper spawning aggregation sites remain in the USVI, so the effectiveness of the Grammanik Bank fishing closure may play a significant role in the recovery of local stocks. -
Life History Demographic Parameter Synthesis for Exploited Florida and Caribbean Coral Reef Fishes
Please do not remove this page Life history demographic parameter synthesis for exploited Florida and Caribbean coral reef fishes Stevens, Molly H; Smith, Steven Glen; Ault, Jerald Stephen https://scholarship.miami.edu/discovery/delivery/01UOML_INST:ResearchRepository/12378179400002976?l#13378179390002976 Stevens, M. H., Smith, S. G., & Ault, J. S. (2019). Life history demographic parameter synthesis for exploited Florida and Caribbean coral reef fishes. Fish and Fisheries (Oxford, England), 20(6), 1196–1217. https://doi.org/10.1111/faf.12405 Published Version: https://doi.org/10.1111/faf.12405 Downloaded On 2021/09/28 21:22:59 -0400 Please do not remove this page Received: 11 April 2019 | Revised: 31 July 2019 | Accepted: 14 August 2019 DOI: 10.1111/faf.12405 ORIGINAL ARTICLE Life history demographic parameter synthesis for exploited Florida and Caribbean coral reef fishes Molly H. Stevens | Steven G. Smith | Jerald S. Ault Rosenstiel School of Marine and Atmospheric Science, University of Miami, Abstract Miami, FL, USA Age‐ or length‐structured stock assessments require reliable life history demo‐ Correspondence graphic parameters (growth, mortality, reproduction) to model population dynamics, Molly H. Stevens, Rosenstiel School of potential yields and stock sustainability. This study synthesized life history informa‐ Marine and Atmospheric Science, University of Miami, 4600 Rickenbacker Causeway, tion for 84 commercially exploited tropical reef fish species from Florida and the Miami, FL 33149, USA. U.S. Caribbean (Puerto Rico and the U.S. Virgin Islands). We attempted to identify a Email: [email protected] useable set of life history parameters for each species that included lifespan, length Funding information at age, weight at length and maturity at length. -
Saltwater Fish Identification Guide
Identification Guide To South Carolina Fishes Inshore Fishes Red Drum (Spottail, redfish, channel bass, puppy drum,) Sciaenops ocellatus May have multiple spots along dorsal surface.. RKW Black Drum Pogonias cromis Broad black vertical bars along body. Barbells on chin. Spotted Seatrout (Winter trout, speckled trout) Cynoscion nebulosus Numerous distinct black spots on dorsal surface. Most commonly encountered in rivers and estuaries. RKW Most commonly encountered just offshore around live bottom and artificial reefs. Weakfish (Summer trout, Gray trout) Cynoscion regalis RKW Silver coloration with no spots. Large eye Silver Seatrout Cynoscion nothus RKW Spot Leiostomus xanthurus Distinct spot on shoulder. RKW Atlantic Croaker (Hardhead) Micropogonias undulatus RKW Silver Perch (Virginia Perch) Bairdiella chrysoura RKW Sheepshead Archosargus probatocephalus Broad black vertical bars along body. RKW Pinfish (Sailors Choice) Lagodon rhomboides Distinct spot. RKW Southern Kingfish (Whiting) Menticirrhus americanus RKW Extended 1st dorsal filament Northern Kingfish SEAMAP- Menticirrhus saxatilis SA:RPW Dusky 1st dorsal-fin tip Black caudal fin tip Gulf Kingfish SEAMAP- Menticirrhus littoralis SA:RPW Southern flounder Paralichthys lethostigma No ocellated spots . RKW Summer flounder Paralichthys dentatus Five ocellated spots in this distinct pattern. B. Floyd Gulf flounder Paralichthys albigutta B. Floyd Three ocellated spots in a triangle pattern. B. Floyd Bluefish Pomatomus saltatrix RKW Inshore Lizardfish Synodus foetens RKW RKW Ladyfish Elops saurus Florida Pompano Trachinotus carolinus RKW Lookdown Selene vomer RKW Spadefish Chaetodipterus faber Juvenile RKW Juvenile spadefish are commonly found in SC estuaries. Adults, which look very similar to the specimen shown above, are common inhabitants of offshore reefs. Cobia Rachycentron canadum Adult D. Hammond Juvenile RKW D. -
FISHES (C) Val Kells–November, 2019
VAL KELLS Marine Science Illustration 4257 Ballards Mill Road - Free Union - VA - 22940 www.valkellsillustration.com [email protected] STOCK ILLUSTRATION LIST FRESHWATER and SALTWATER FISHES (c) Val Kells–November, 2019 Eastern Atlantic and Gulf of Mexico: brackish and saltwater fishes Subject to change. New illustrations added weekly. Atlantic hagfish, Myxine glutinosa Sea lamprey, Petromyzon marinus Deepwater chimaera, Hydrolagus affinis Atlantic spearnose chimaera, Rhinochimaera atlantica Nurse shark, Ginglymostoma cirratum Whale shark, Rhincodon typus Sand tiger, Carcharias taurus Ragged-tooth shark, Odontaspis ferox Crocodile Shark, Pseudocarcharias kamoharai Thresher shark, Alopias vulpinus Bigeye thresher, Alopias superciliosus Basking shark, Cetorhinus maximus White shark, Carcharodon carcharias Shortfin mako, Isurus oxyrinchus Longfin mako, Isurus paucus Porbeagle, Lamna nasus Freckled Shark, Scyliorhinus haeckelii Marbled catshark, Galeus arae Chain dogfish, Scyliorhinus retifer Smooth dogfish, Mustelus canis Smalleye Smoothhound, Mustelus higmani Dwarf Smoothhound, Mustelus minicanis Florida smoothhound, Mustelus norrisi Gulf Smoothhound, Mustelus sinusmexicanus Blacknose shark, Carcharhinus acronotus Bignose shark, Carcharhinus altimus Narrowtooth Shark, Carcharhinus brachyurus Spinner shark, Carcharhinus brevipinna Silky shark, Carcharhinus faiformis Finetooth shark, Carcharhinus isodon Galapagos Shark, Carcharhinus galapagensis Bull shark, Carcharinus leucus Blacktip shark, Carcharhinus limbatus Oceanic whitetip shark, -
Activity, Habitat Use, Feeding Behavior, and Diet of Four Sympatric Species of Serranidae (Actinopterygii: Perciformes) in Southeastern Brazil
Neotropical Ichthyology, 5(3):387-398, 2007 Copyright © 2007 Sociedade Brasileira de Ictiologia Activity, habitat use, feeding behavior, and diet of four sympatric species of Serranidae (Actinopterygii: Perciformes) in southeastern Brazil Fernando Zaniolo Gibran Diplectrum formosum (the sand perch), Diplectrum radiale (the aquavina), Epinephelus marginatus (the dusky grouper) and Mycteroperca acutirostris (the comb grouper) are four sympatric serranid of remarkable ecological and commercial importance. This study investigated the feeding of these four species in the São Sebastião Channel, São Paulo State (southeastern Brazil), comparing their diet, habitat utilization and morphological features related to foraging. These four serranids are opportunistic visual predators that use a total of nine different tactics to capture their preys, feed mostly on crustaceans during the day and twilight, and keep stationary and quiescent at night. The ecomorphological study was conducted to test its predictive value to infer lifestyles. It was verified that such analysis should be used carefully and must be complemented by field observations. Although morphologically and behaviorally very similar, D. formosum and D. radiale showed different preferences to the substratum type used by large individuals, which are exclusively sit-and-wait predators. On the other hand, E. marginatus displayed more sedentary habits than M. acutirostris, the most versatile predator from the studied species. The studied species of Diplectrum and E. marginatus can be regarded as benthic serranids, while M. acutirostris could be viewed as a nektobenthic species. Diplectrum formosum, Diplectrum radiale (micholes-da-areia), Epinephelus marginatus (garoupa-verdadeira) e Mycteroperca acutirostris (badejo-mira) são quatro espécies simpátricas que pertencem à família Serranidae, de reconhecida importância ecológica e comercial. -
Ensuring Seafood Identity: Grouper Identification by Real-Time Nucleic
Food Control 31 (2013) 337e344 Contents lists available at SciVerse ScienceDirect Food Control journal homepage: www.elsevier.com/locate/foodcont Ensuring seafood identity: Grouper identification by real-time nucleic acid sequence-based amplification (RT-NASBA) Robert M. Ulrich a, David E. John b, Geran W. Barton c, Gary S. Hendrick c, David P. Fries c, John H. Paul a,* a College of Marine Science, MSL 119, University of South Florida, 140 Seventh Ave. South, St. Petersburg, FL 33701, USA b Department of Biological Sciences, University of South Florida St. Petersburg, 140 Seventh Ave. S., St. Petersburg, FL 33701, USA c EcoSystems Technology Group, College of Marine Science, University of South Florida, 140 Seventh Ave. S., St. Petersburg, FL 33701, USA article info abstract Article history: Grouper are one of the most economically important seafood products in the state of Florida and their Received 19 September 2012 popularity as a high-end restaurant dish is increasing across the U.S. There is an increased incidence rate Accepted 3 November 2012 of the purposeful, fraudulent mislabeling of less costly and more readily available fish species as grouper in the U.S., particularly in Florida. This is compounded by commercial quotas on grouper becoming Keywords: increasingly more restrictive, which continues to drive both wholesale and restaurant prices higher each RT-NASBA year. Currently, the U.S. Food and Drug Administration recognize 56 species of fish that can use “grouper” FDA seafood list as an acceptable market name for interstate commerce. This group of fish includes species from ten Grouper fi fi Mislabeling different genera, making accurate taxonomic identi cation dif cult especially if distinguishing features such as skin, head, and tail have been removed.