Unclusterable, Underdispersed Arrangement of Insect‐Pollinated
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A New Automatic Approach to Seed Image Analysis: from Acquisition to Segmentation
A new automatic approach to seed image analysis: From acquisition to segmentation Vale A.M.P.G.1, Ucchesu M.2*, Di Ruberto C.3, Loddo A.3, Soares J.M.4, Bacchetta G.2,5 1 Escola Agrícola de Jundiaí (EAJ), Universidade Federal do Rio Grande do Norte (UFRN), Rodovia RN 160, Km 03, CEP 59280-000 Macaíba (RN), Brasil. 2 Centro Conservazione Biodiversità (CCB), Dipartimento di Scienze della Vita e dell’Ambiente (DiSVA), Università degli Studi di Cagliari, Viale S. Ignazio da Laconi 13, 09123 Cagliari, Italy. 3 Dipartimento di Matematica e Informatica, Università degli Studi di Cagliari, Via Ospedale 72, 09124 Cagliari, Italy. 4 Universidade Federal do Rio Grande do Norte (UFRN), Rodovia RN 160, Km 03, CEP 59280-000 Macaíba (RN), Brasil. 5 Hortus Botanicus Karalitanus (HBK), Università degli Studi di Cagliari, Viale S. Ignazio da Laconi 11, 09123 Cagliari, Italy. Corresponding author: Mariano Ucchesu - email: [email protected] Abstract Recently, image analysis has begun to be widely applied in the field of plant sciences. It offers a new tool for classifying vascular plant species based on the morphological and colorimetric features of the seeds, and has made significant contributions in systematic studies. However, in order to extract the morphological and colorimetric features, it is necessary to segment the image containing the samples to be analysed. This stage represents one of the most challenging steps in image processing, as it is difficult to separate uniform and homogeneous objects from the background. In this paper, we present a new, open source plugin for the automatic segmentation of an image of a seed sample. -
The Leipzig Catalogue of Plants (LCVP) ‐ an Improved Taxonomic Reference List for All Known Vascular Plants
Freiberg et al: The Leipzig Catalogue of Plants (LCVP) ‐ An improved taxonomic reference list for all known vascular plants Supplementary file 3: Literature used to compile LCVP ordered by plant families 1 Acanthaceae AROLLA, RAJENDER GOUD; CHERUKUPALLI, NEERAJA; KHAREEDU, VENKATESWARA RAO; VUDEM, DASHAVANTHA REDDY (2015): DNA barcoding and haplotyping in different Species of Andrographis. In: Biochemical Systematics and Ecology 62, p. 91–97. DOI: 10.1016/j.bse.2015.08.001. BORG, AGNETA JULIA; MCDADE, LUCINDA A.; SCHÖNENBERGER, JÜRGEN (2008): Molecular Phylogenetics and morphological Evolution of Thunbergioideae (Acanthaceae). In: Taxon 57 (3), p. 811–822. DOI: 10.1002/tax.573012. CARINE, MARK A.; SCOTLAND, ROBERT W. (2002): Classification of Strobilanthinae (Acanthaceae): Trying to Classify the Unclassifiable? In: Taxon 51 (2), p. 259–279. DOI: 10.2307/1554926. CÔRTES, ANA LUIZA A.; DANIEL, THOMAS F.; RAPINI, ALESSANDRO (2016): Taxonomic Revision of the Genus Schaueria (Acanthaceae). In: Plant Systematics and Evolution 302 (7), p. 819–851. DOI: 10.1007/s00606-016-1301-y. CÔRTES, ANA LUIZA A.; RAPINI, ALESSANDRO; DANIEL, THOMAS F. (2015): The Tetramerium Lineage (Acanthaceae: Justicieae) does not support the Pleistocene Arc Hypothesis for South American seasonally dry Forests. In: American Journal of Botany 102 (6), p. 992–1007. DOI: 10.3732/ajb.1400558. DANIEL, THOMAS F.; MCDADE, LUCINDA A. (2014): Nelsonioideae (Lamiales: Acanthaceae): Revision of Genera and Catalog of Species. In: Aliso 32 (1), p. 1–45. DOI: 10.5642/aliso.20143201.02. EZCURRA, CECILIA (2002): El Género Justicia (Acanthaceae) en Sudamérica Austral. In: Annals of the Missouri Botanical Garden 89, p. 225–280. FISHER, AMANDA E.; MCDADE, LUCINDA A.; KIEL, CARRIE A.; KHOSHRAVESH, ROXANNE; JOHNSON, MELISSA A.; STATA, MATT ET AL. -
Ecological Restoration and Sustainable Development Establishing Links Across Frontiers
CONFERENCE 7th SER European Conference PROGRAMME on Ecological Restoration ABSTRACT 23-27 AUGUST 2010 BOOK AVIGNON FRANCE ECOLOGICAL RESTORATION AND SUSTAINABLE DEVELOPMENT ESTABLISHING LINKS ACROSS FRONTIERS 7e Conférence Européenne SER en Ecologie de la Restauration 23-27 AOUT 2010 AVIGNON FRANCE ECOLOGIE DE LA RESTAURATION ET DEVELOPPEMENT DURABLE DEPASSER LES FRONTIERES N POPES’ PALACE POPES’ PALACE PLACE L E 1 - Centre des Congrès entrance Lp ESPACE 2 - Public entrance JEANNE LAURENT 3 - Salle des Gardes (registrations, informations, changing room) 4 - Salle du Trésorier 5 - Cubiculaire 6 - Herse Champeaux 7 - Cellier Benoît XII 8 - Paneterie (1 to 4) (Paneterie 4 = preview room) 9 - Conclave (Plenary sessions, opening and closing ceremony) 10 - Grand Tinel - Great Tinel Hall (Gala dinner) 11 - Chambre aux Quatre Fenêtres (internet wireless) 12 - Herses Notre-Dame (meetings) POPES’ PALACE 13 - Grande Audience (exhibitions, breaks) 14 - Bouteillerie (wine cellar) N 15 - Espace Jeanne Laurent (lunch) 1 — Ecological restoration and sustainable development - Establishing links across frontiers Dear colleagues, Preface It is a great honour for me to welcome in the name of the organizing committee, at the 7th European Conference in Ecological Restoration, placed under the auspices of the International Society of Ecological Restoration, chapter Europe. It is also a real pride for us to have been chosen to organize this event because too few international congresses in ecology have been organized in France these past years. It has now been two years that we work so that this event can take place for the fi rst time in France and in the prestigious place of the International Popes' Palace Conference Center in Avignon. -
Unclusterable, Underdispersed Arrangement of Insect-Pollinated Plants
bioRxiv preprint doi: https://doi.org/10.1101/2020.03.19.999169; this version posted September 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Herrera – 1 1 Unclusterable, underdispersed arrangement of insect-pollinated plants 2 in pollinator niche space 3 4 5 Carlos M. Herrera 1 6 Estación Biológica de Doñana, Consejo Superior de Investigaciones Científicas, Avenida 7 Americo Vespucio 26, E-41092 Sevilla, Spain 8 9 Running head: Plant species in pollinator niche space 10 11 1 E-mail: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/2020.03.19.999169; this version posted September 29, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Herrera – 2 12 Abstract. Pollinators can mediate facilitative or competitive relationships between plant 13 species, but the comparative importance of these two conflicting phenomena in shaping 14 community-wide pollinator resource use remains unexplored. This paper examines the idea that 15 the arrangement in pollinator niche space of plant species samples comprising complete or 16 nearly complete regional or local plant communities can help to evaluate the relative importance 17 of facilitation and competition as drivers of community-wide pollinator resource use. -
Resolving the Position of Astragalus Borysthenicus Klokov Within the Astragalus L
Turkish Journal of Botany Turk J Bot (2018) 42: 623-635 http://journals.tubitak.gov.tr/botany/ © TÜBİTAK Research Article doi:10.3906/bot-1712-52 Resolving the position of Astragalus borysthenicus Klokov within the Astragalus L. species 1, 2 2 3 Nataliia KARPENKO *, Viktoriia MARTYNIUK , Oksana TYSHCHENKO , Andrii TARIEIEV , 4 2 2 Ayten TEKPINAR DİZKIRICI , Vitaliia DIDENKO , Igor KOSTIKOV 1 Research Laboratory of Biochemistry, Educational and Scientific Centre “Institute of Biology and Medicine”, Taras Shevchenko National University of Kyiv, Kyiv, Ukraine 2 Department of Plant Biology, Educational and Scientific Centre “Institute of Biology and Medicine”, Taras Shevchenko National University of Kyiv, Kyiv, Ukraine 3 Ukrainian Botanical Society, Kyiv, Ukraine 4 Department of Molecular Biology and Genetics, Faculty of Science, Van Yüzüncü Yıl University, Van, Turkey Received: 27.12.2017 Accepted/Published Online: 06.05.2018 Final Version: 26.09.2018 Abstract: The present study is focused on several species from the genus Astragalus L. with the aim to clarify the taxonomic status of Ukrainian local endemic species Astragalus borysthenicus Klokov, which is sometimes considered a synonym to A. onobrychis L. In this study, the morphological features, current taxonomy, taxonomical history, and phylogenetic analysis based on rDNA Bayesian inference, as well as comparative analysis of ITS1 and ITS2 secondary structures, were investigated. It was found that A. borysthenicus is distant from A. onobrychis according to phylogenetic analysis. Moreover, A. borysthenicus has differences from the investigated taxa in its secondary structures of ITS1 and ITS2 transcripts. These data suggest that A. borysthenicus should be treated as a separate species rather than a synonym to A. -
Tome 71 – 2018
ISSN : 0037 - 9034 2018 Volume 71 Fascicule 1-4 BULLETIN DE LA SOCIETE DE BOTANIQUE DU NORD DE LA FRANCE Association sans but lucratif Fondée en 1947 Siège social : Centre de Phytosociologie – Conservatoire Botanique National Hameau de Haendries – 59270 BAILLEUL SOCIETE DE BOTANIQUE DU NORD DE LA FRANCE (SBNF) Fondée en 1947 Objet : Favoriser les échanges et la convivialité au sein du réseau des botanistes du nord de la France. Siège et secrétariat : Centre régional de phytosociologie/Conservatoire botanique national de Bailleul. Hameau de Haendries - F-59270 BAILLEUL. Trésorerie : Thierry CORNIER 36, rue de Sercus, F-59190 HAZEBROUCK. Tél : +33 (0)3.28.42.88.49 Courriel : [email protected] Bureau Président Emmanuel CATTEAU [email protected] Secrétaire général Geoffroy VILLEJOUBERT [email protected] Trésorier Thierry CORNIER [email protected] Trésorière adjointe Lucie DAMBRINE [email protected] Membres élus du Conseil d'administration : J. BERNIER, C. BEUGIN, Ch CAMART, E. CATTEAU, T. CORNIER, L. DAMBRINE, F. DUHAMEL, F. DUPONT, B. GALLET, P. JULVE, V. LEJEUNE, Ch MONEIN, D. PETIT, P. SOTTIEZ, B. STIEN, G. VILLEJOUBERT Cotisation. Elle est effective du 1er mars de l’année en cours au 28/29 février de l’année suivante. Le montant en est fixé par l'Assemblée générale sur proposition du Conseil. Elle est à verser, accompagnée du bulletin d’adhésion ou de réadhésion pour l’année en cours, à l’adresse suivante : SBNF - Conservatoire botanique national de Bailleul. Hameau de Haendries - F-59270 BAILLEUL. Cotisation avec bulletin papier : Etudiants: 15 €, Membres: 25 €, Associations: 30 € Cotisation avec bulletin en version numérique (à partir du n° 67): Etudiants: 10 €, Membres: 20 €, Associations: 25 € La cotisation est également possible en ligne via le lien suivant : https://www.helloasso.com/associations/societe-de-botanique-du-nord-de-la-france/adhesions/adhesion- sbnf-2019 Nouveaux membres. -
ATLAS FLORAE EUROPAEAE 19 Leguminosae (Fabaceae) (Astragalus to Erophaca)
1 ATLAS FLORAE EUROPAEAE 19 Leguminosae (Fabaceae) (Astragalus to Erophaca) Draft text June 2017 (compiled by Arto Kurtto) The taxonomy and order of the Astragalus taxa follow principally D. Podlech & S.H. Zarre (with collaboration of M. Ekici, A.A. Maassoumi & A. Sytin), A taxonomic revision of the genus Astragalus L. (Leguminosae) in the Old World. I–III. – 2439 pp. Bad Vöslau 2013. The taxonomy and order of the Oxytropis taxa follow principally Flora Europaea, but many eastern species have been added as floristic or taxonomic novelties. Of the genera accepted in Fl. Eur., Biserrula is included in Astragalus. On the other hand, Erophaca is here treated as a genus separate from Astragalus. Unlike in previous volumes, (1) the author and publication abbreviations follow the standards of IPNI, (2) the section ‘Biosystematics’ is replaced by ‘Phylogenetics’, and (3) the territory abbreviations Uk (K) and Uk (U) are replaced by Cm and Uk, respectively. The text still includes items to be checked. Some of them are indicated by double asterisks (**). Comments on the marked and other items are welcome to [email protected]. Deviations from Flora Europaea Additions 1. Previously described European taxa included as species or subspecies, although not recognised or not recognised separately in Fl. Eur. Astragalus angustifolius Lam. subsp. echinoides (L’Her.) Brullo, Giusso & Musarella A. angustifolius subsp. erinaceus (C. Presl) Brullo, Giusso & Musarella A. clausii C.A. Mey. A. hypoglottis L. subsp. gremlii (Burnat) Greuter & Burdet A. ictericus Dingler A. exscapus L. subsp. transsilvanicus (Schur) Nyár. A. filiformis (DC.) Poir. A. maritimus Moris A. monspessulanus L. -
Morpho-Colorimetric Characterization of the Sardinian Endemic Taxa of the Genus Anchusa L
plants Article Morpho-Colorimetric Characterization of the Sardinian Endemic Taxa of the Genus Anchusa L. by Seed Image Analysis Emmanuele Farris 1, Martino Orrù 2, Mariano Ucchesu 3, Arianna Amadori 1 , Marco Porceddu 3,4,* and Gianluigi Bacchetta 3,4 1 Dipartimento di Chimica e Farmacia, Università di Sassari, Via Piandanna 4, 07100 Sassari, Italy; [email protected] (E.F.); [email protected] (A.A.) 2 Independent researcher, via Nazionale, 09023 Monastir (CA), Italy; [email protected] 3 Centre for the Conservation of Biodiversity (CCB), Life and Environmental Sciences Department, University of Cagliari (DiSVA), Viale S. Ignazio da Laconi 11-13, 09123 Cagliari, Italy; [email protected] (M.U.); [email protected] (G.B.) 4 Sardinian Germplasm Bank (BG-SAR), Hortus Botanicus Karalitanus (HBK), University of Cagliari, Viale S. Ignazio da Laconi, 9-11, 09123 Cagliari, Italy * Correspondence: [email protected]; Tel.: +39-0706753806 Received: 10 September 2020; Accepted: 3 October 2020; Published: 6 October 2020 Abstract: In this work, the seed morpho-colorimetric differentiation of the Sardinian endemic species of Anchusa (Boraginaceae) was evaluated. In Sardinia, the Anchusa genus includes the following seven taxa: A. capellii, A. crispa ssp. crispa, A. crispa ssp. maritima, A. formosa, A. littorea, A. montelinasana, and A. sardoa. Seed images were acquired using a flatbed scanner and analyzed using the free software package ImageJ. A total of 74 seed morpho-colorimetric features of 2692 seed lots of seven taxa of Anchusa belonging to 17 populations were extrapolated and used to build a database of seed size, shape, and color features. The data were statistically elaborated by the stepwise linear discriminant analysis (LDA) to compare and discriminate each accession and taxon. -
The Type Specimens in Eugen Von Halácsy´S Herbarium Graecum
Phytotaxa 493 (1): 001–156 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2021 Magnolia Press Monograph ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.493.1.1 PHYTOTAXA 493 The type specimens in Eugen von Halácsy´s Herbarium Graecum DIETER REICH1*, WALTER GUTERMANN1, KATHARINA BARDY2, HEIMO RAINER1,3, THOMAS RAUS4, MICHAELA SONNLEITNER1,5, KIT TAN6 & MARGARITA LACHMAYER7* 1Division of Systematic and Evolutionary Botany, University of Vienna, Rennweg 14, Vienna, 1030, Austria [email protected], http://orcid.org/0000-0003-0784-0048 [email protected], https://orcid.org/0000-0002-9201-6872 2Institute for Integrative Nature Conservation Research, University of Natural Resources and Life Sciences, Gregor-Mendel-Straße 33, Vienna, 1180, Austria [email protected], http://orcid.org/0000-0002-5882-8818 3 Department of Botany, Natural History Museum Vienna, Burgring 7, Vienna, 1010, Austria [email protected], http://orcid.org/0000-0002-5963-349X 4 Botanic Garden and Botanical Museum Berlin, Freie Universität Berlin, Königin-Luise-Str. 6-8, 14195 Berlin, Germany [email protected], http://orcid.org/0000-0001-5778-4705 5 Department of Botany, Natural History Museum Vienna, Burgring 7, Vienna, 1010, Austria [email protected]; https://orcid.org/0000-0002-2026-8229 6 Institute of Biology, University of Copenhagen, Universitetsparken 15D, 2100 Copenhagen Ø, Denmark [email protected]; https://orcid.org/0000-0001-8742-4612 7 Division of Structural and Functional Botany, University of Vienna, Rennweg 14, Vienna, 1030, Austria [email protected]; https://orcid.org/0000-0001-8369-9037 *Authors for correspondence Magnolia Press Auckland, New Zealand Accepted by Christian Bräuchler: 29 Dec. -
The Names of Plants, Third Edition
THE NAMES OF PLANTS The Names of Plants is a handy, two-part reference book for the botanist and amateur gardener. The book begins by documenting the historical problems associated with an ever-increasing number of common names of plants and the resolution of these problems through the introduction of International Codes for both botanical and horticultural nomenclature. It also outlines the rules to be followed when plant breeders name a new species or cultivar of plant. The second part of the book comprises an alphabetical glossary of generic and specific plant names, and components of these, from which the reader may interpret the existing names of plants and construct new names. For the third edition, the book has been updated to include explanations of the International Codes for both Botanical Nomen- clature (2000) and Nomenclature for Cultivated Plants (1995). The glossary has similarly been expanded to incorporate many more commemorative names. THE NAMES OF PLANTS THIRD EDITION David Gledhill Formerly Senior Lecturer, Department of Botany, University of Bristol and Curator of Bristol University Botanic Garden Cambridge, New York, Melbourne, Madrid, Cape Town, Singapore, São Paulo Cambridge University Press The Edinburgh Building, Cambridge , United Kingdom Published in the United States of America by Cambridge University Press, New York www.cambridge.org Information on this title: www.cambridge.org/9780521818636 © Cambridge University Press 2002 This book is in copyright. Subject to statutory exception and to the provision of -
753Ec440503207c7129dd8a2dc
2 EDITORIAL PROJECT Centro Conservazione Biodiversità (CCB) Consulcongress srl Department of Botanical Sciences Via San Benedetto, 88 University of Cagliari 09129 Cagliari, Italy Tel. +39 070 6753508 Tel. 0039 070 499242 Fax +39 070 6753509 Fax 0039 070 485402 [email protected] Email: [email protected] www.ccb-sardegna.it www.consulcongress.it The total or partial reproduction of the content must be approved and expressly authorized by the Scientific Committee of the 45th International Congress of SISV & FIP. In all cases, the authorized use of the content is subject is subject to the unavoidable obligation to specifically quote the source © Copyright by Centro Conservazione Biodiversità (CCB) Department of Botanical Sciences - University of Cagliari PRINTED BY: Sainas Industrie Grafiche COVER GRAPHIC DESIGNER: Roberto Pisu, Cagliari, Italy ISBN 978-88-904296-06 4 COMMITTEES Scientific Committee Prof. Gianluigi Bacchetta (President of Organizing Committee, University of Cagliari) Prof. Edoardo Biondi (FIP Secretary, University of Ancona) Prof. Carlo Blasi (SISV President, University of Roma La Sapienza) Prof. Elena Conti (University of Zurich) Prof.ssa Rossella Filigheddu (University of Sassari) Prof. Frédéric Medail (University Paul Cézanne Aix-Marseille III) Prof. Luigi Mossa (University of Cagliari) Prof. Salvador Rivas-Martínez (FIP President, Hemeritus of University of Madrid). Editorial Board Prof. Gianluigi Bacchetta, Prof. Edoardo Biondi, Prof. Carlo Blasi, Dr. Giulia Capotorti, Dr. Mauro Casti, Prof. Elena Conti, Dr. Giuseppe Fenu, Dr. Raffaella Frondoni, Dr. Gianluca Iiriti, Dr. Efisio Mattana, Prof. Frédéric Medail, Dr. Francesca Meloni, Dr. Lina Podda, Dr. Cristiano Pontecorvo, Dr. Monica Valentini, Ms. Simona Dedoni. Organizing Committee Dr. Bianca Alvau, Mr. Paolo Atzeri, Mr. -
Evaluation of Some Biopolymers for Various Pharmaceutical Applications
EVALUATION OF SOME BIOPOLYMERS FOR VARIOUS PHARMACEUTICAL APPLICATIONS BY SHAZMA MASSEY ROLL NO. 105-Ph.D-Chem-2009 SESSION: 2009-2014 1 DEPARTMENT OF CHEMISTRY GC UNIVERSITY, LAHORE EVALUATION OF SOME BIOPOLYMERS FOR VARIOUS PHARMACEUTICAL APPLICATIONS A thesis submitted to the GC University Lahore in partial fulfillment of the requirements for the award of the degree of DOCTOR OF PHILOSOPHY IN CHEMISTRY BY SHAZMA MASSEY ROLL NO. 105-Ph.D-Chem-2009 SESSION: 2009-2014 2 DEPARTMENT OF CHEMISTRY GC UNIVERSITY, LAHORE IN THE NAME OF THE MOST MERCIFUL AND GRACIOUS GOD “WHO EVER BELIEVES IN HIM WILL NOT BE DISAPPOINTED” Romans 10: 11 DEDICATED TO MY DEAREST AND LOVING PARENTS PROF. ISAAC MASSEY (Late) AND MRS SHAKUNTALA MASSEY (Late) 3 RESEARCH COMPLETION CERTIFICATE This is to certify that the research work contained in the thesis titled “Evaluation of some biopolymers for various pharmaceutical applications” has been carried out and completed by Ms.Shazma Massey, Roll No. 105-PhD -Chem-2009, Reg. No. 46 -PhD-Chem-2009 under my supervision during her PhD (Chemistry) studies in the laboratories of the Department of Chemistry. The quantum and the quality of the work contained in this thesis is adequate for the award of degree of Doctor of Philosophy. Dated: June27, 2014 __________ __________ Prof. Dr. Mohammad Saeed Iqbal Dr. Irfana Mariam Supervisor Co-Supervisor Submitted through ______________________ _____________________ Prof. Dr. Adnan Ahmad Controller of Examination 4 Chairman GC University, Lahore Department of Chemistry, GC University, Lahore. DECLARATION I, Ms. Shazma Massey, Reg. No. 046-PhD-Chem-2009 student of PhD in the subject of Chemistry, session 2009-2014, hereby declare that the matter printed in the thesis titled “Evaluation of some biopolymers for various pharmaceutical applications” is my own work and has not been printed, published and submitted as thesis or publication in any form in any university, research institute etc.