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Fungi Causing Decay of Living Oaks in the Eastern United States and Their Cukural Identification
TECHNICAL BULLETIN NO. 785 • JANUARY 1942 Fungi Causing Decay of Living Oaks in the Eastern United States and Their Cukural Identification By ROSS W. DAVIDSON Associate Mycologist W. A. CAMPBELL Assistant Pathologist and DOROTHY BLAISDELL VAUGHN Formerly Junior Pathologist Division of Forest Pathology Bureau of Plant Industry UNITED STATES DEPARTMENT OF AGRICULTURE, WASHINGTON, D. C. For sale by the Superintendent of Documents, Washington, D. C. • Price 15 cents Technical Bulletin No. 785 • January 1942 Fungi Causing Decay of Living Oaks in the Eastern United States and Their Cul- tural Identification^ By Ross W. DAVIDSON, associate mycologist, W. A. CAMPBELL,^ assistant patholo- gist, and DOROTHY BLAISDELL VAUGHN,2 formerly junior pathologist, Division of Forest Pathology, Bureau of Plant Industry CONTENTS Page Page Introduction 2 Descriptions of oak-decaying fungi in culture- Factors aflecting relative-prevalence figures for Continued. decay fungi 2 Polyporus frondosus Dicks, ex Fr. 31 Methods of sampling 2 Polyporus gilvus Schw. ex Fr. 31 Identification and isolation difläculties 3 Polyporus graveolens Schw. ex Fr. 33 Type of stand 4 Polyporus hispidus Bull, ex Fr. 34 Identification of fungi isolated from oak decays - 4 Polyporus lucidus Leyss. ex. Fr. ' 36 Methods used to identify decay fungi 5 Polyporus ludovicianus (Pat.) Sacc. and The efíect of variation on the identification Trott 36 of fungi by pure-culture methods 8 Polyporus obtusus Berk. 36 Classification and file system 9 Polyporus pargamenus Fr. _ 37 Key to oak-decaying fungi when grown on malt Polyporus spraguei Berk, and Curt. 38 agar 11 Polyporus sulpjiureus Bull, ex FT. _ 38 Descriptions of oak-decaying fungi in culture _ _ 13 Polyporus versicolor L, ex Fr. -
Phylogenetic Classification of Trametes
TAXON 60 (6) • December 2011: 1567–1583 Justo & Hibbett • Phylogenetic classification of Trametes SYSTEMATICS AND PHYLOGENY Phylogenetic classification of Trametes (Basidiomycota, Polyporales) based on a five-marker dataset Alfredo Justo & David S. Hibbett Clark University, Biology Department, 950 Main St., Worcester, Massachusetts 01610, U.S.A. Author for correspondence: Alfredo Justo, [email protected] Abstract: The phylogeny of Trametes and related genera was studied using molecular data from ribosomal markers (nLSU, ITS) and protein-coding genes (RPB1, RPB2, TEF1-alpha) and consequences for the taxonomy and nomenclature of this group were considered. Separate datasets with rDNA data only, single datasets for each of the protein-coding genes, and a combined five-marker dataset were analyzed. Molecular analyses recover a strongly supported trametoid clade that includes most of Trametes species (including the type T. suaveolens, the T. versicolor group, and mainly tropical species such as T. maxima and T. cubensis) together with species of Lenzites and Pycnoporus and Coriolopsis polyzona. Our data confirm the positions of Trametes cervina (= Trametopsis cervina) in the phlebioid clade and of Trametes trogii (= Coriolopsis trogii) outside the trametoid clade, closely related to Coriolopsis gallica. The genus Coriolopsis, as currently defined, is polyphyletic, with the type species as part of the trametoid clade and at least two additional lineages occurring in the core polyporoid clade. In view of these results the use of a single generic name (Trametes) for the trametoid clade is considered to be the best taxonomic and nomenclatural option as the morphological concept of Trametes would remain almost unchanged, few new nomenclatural combinations would be necessary, and the classification of additional species (i.e., not yet described and/or sampled for mo- lecular data) in Trametes based on morphological characters alone will still be possible. -
Three Species of Wood-Decaying Fungi in <I>Polyporales</I> New to China
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 Mycotaxon, Ltd. ©2017 January–March 2017—Volume 132, pp. 29–42 http://dx.doi.org/10.5248/132.29 Three species of wood-decaying fungi in Polyporales new to China Chang-lin Zhaoa, Shi-liang Liua, Guang-juan Ren, Xiao-hong Ji & Shuanghui He* Institute of Microbiology, Beijing Forestry University, No. 35 Qinghuadong Road, Haidian District, Beijing 100083, P.R. China * Correspondence to: [email protected] Abstract—Three wood-decaying fungi, Ceriporiopsis lagerheimii, Sebipora aquosa, and Tyromyces xuchilensis, are newly recorded in China. The identifications were based on morphological and molecular evidence. The phylogenetic tree inferred from ITS+nLSU sequences of 49 species of Polyporales nests C. lagerheimii within the phlebioid clade, S. aquosa within the gelatoporia clade, and T. xuchilensis within the residual polyporoid clade. The three species are described and illustrated based on Chinese material. Key words—Basidiomycota, polypore, taxonomy, white rot fungus Introduction Wood-decaying fungi play a key role in recycling nutrients of forest ecosystems by decomposing cellulose, hemicellulose, and lignin of the plant cell walls (Floudas et al. 2015). Polyporales, a large order in Basidiomycota, includes many important genera of wood-decaying fungi. Recent molecular studies employing multi-gene datasets have helped to provide a phylogenetic overview of Polyporales, in which thirty-four valid families are now recognized (Binder et al. 2013). The diversity of wood-decaying fungi is very high in China because of the large landscape ranging from boreal to tropical zones. More than 1200 species of wood-decaying fungi have been found in China (Dai 2011, 2012), and some a Chang-lin Zhao and Shi-liang Liu contributed equally to this work and share first-author status 30 .. -
Research Journal of Pharmaceutical, Biological and Chemical Sciences
ISSN: 0975-8585 Research Journal of Pharmaceutical, Biological and Chemical Sciences Popularity of species of polypores which are parasitic upon oaks in coppice oakeries of the South-Western Central Russian Upland in Russian Federation. Alexander Vladimirovich Dunayev*, Valeriy Konstantinovich Tokhtar, Elena Nikolaevna Dunayeva, and Svetlana Viсtorovna Kalugina. Belgorod State National Research University, Pobedy St., 85, Belgorod, 308015, Russia. ABSTRACT The article deals with research of popularity of polypores species (Polyporaceae sensu lato), which are parasitic upon living English oaks Quercus robur L. in coppice oakeries of the South-Western Central Russian Upland in the context of their eco-biological peculiarities. It was demonstrated that the most popular species are those for which an oak is a principal host, not an accidental one. These species also have effective parasitic properties and are able to spread in forest stands, from tree to tree. Keywords: polypores, Quercus robur L., coppice forest stand, obligate parasite, facultative saprotroph, facultative parasite, popularity. *Corresponding author September - October 2014 RJPBCS 5(5) Page No. 1691 ISSN: 0975-8585 INTRODUCTION Polypores Polyporaceae s. l. is a group of basidium fungi which is traditionnaly discriminated on the basis of formal resemblance, including species of wood destroyers, having sessile (or rarer extended) fruit bodies and tube (or labyrinth-like or gill-bearing) hymenophore. Many of them are parasites housing on living trees of forest-making species, or pathogens – agents of root, butt or trunk rot. Rot’s development can lead to attenuation, drying, wind breakage or windfall of stressed trees. On living trees Quercus robur L., which is the main forest-making species of autochthonous forest steppe oakeries in Eastern Europe, in conditions of Central Russian Upland, we can find nearly 10 species of polypores [1-3], belonging to orders Agaricales, Hymenochaetales, Polyporales (class Agaricomicetes, division Basidiomycota [4]). -
Biodiversity of Wood-Decay Fungi in Italy
AperTO - Archivio Istituzionale Open Access dell'Università di Torino Biodiversity of wood-decay fungi in Italy This is the author's manuscript Original Citation: Availability: This version is available http://hdl.handle.net/2318/88396 since 2016-10-06T16:54:39Z Published version: DOI:10.1080/11263504.2011.633114 Terms of use: Open Access Anyone can freely access the full text of works made available as "Open Access". Works made available under a Creative Commons license can be used according to the terms and conditions of said license. Use of all other works requires consent of the right holder (author or publisher) if not exempted from copyright protection by the applicable law. (Article begins on next page) 28 September 2021 This is the author's final version of the contribution published as: A. Saitta; A. Bernicchia; S.P. Gorjón; E. Altobelli; V.M. Granito; C. Losi; D. Lunghini; O. Maggi; G. Medardi; F. Padovan; L. Pecoraro; A. Vizzini; A.M. Persiani. Biodiversity of wood-decay fungi in Italy. PLANT BIOSYSTEMS. 145(4) pp: 958-968. DOI: 10.1080/11263504.2011.633114 The publisher's version is available at: http://www.tandfonline.com/doi/abs/10.1080/11263504.2011.633114 When citing, please refer to the published version. Link to this full text: http://hdl.handle.net/2318/88396 This full text was downloaded from iris - AperTO: https://iris.unito.it/ iris - AperTO University of Turin’s Institutional Research Information System and Open Access Institutional Repository Biodiversity of wood-decay fungi in Italy A. Saitta , A. Bernicchia , S. P. Gorjón , E. -
Molecular Phylogeny and Taxonomic Position of Trametes Cervina and Description of a New Genus Trametopsis
CZECH MYCOL. 60(1): 1–11, 2008 Molecular phylogeny and taxonomic position of Trametes cervina and description of a new genus Trametopsis MICHAL TOMŠOVSKÝ Faculty of Forestry and Wood Technology, Mendel University of Agriculture and Forestry in Brno, Zemědělská 3, CZ-613 00, Brno, Czech Republic [email protected] Tomšovský M. (2008): Molecular phylogeny and taxonomic position of Trametes cervina and description of a new genus Trametopsis. – Czech Mycol. 60(1): 1–11. Trametes cervina (Schwein.) Bres. differs from other species of the genus by remarkable morpho- logical characters (shape of pores, hyphal system). Moreover, an earlier published comparison of the DNA sequences within the genus revealed considerable differences between this species and the re- maining European members of the genus Trametes. These results were now confirmed using se- quences of nuclear LSU and mitochondrial SSU regions of ribosomal DNA. The most related species of Trametes cervina are Ceriporiopsis aneirina and C. resinascens. According to these facts, the new genus Trametopsis Tomšovský is described and the new combination Trametopsis cervina (Schwein.) Tomšovský is proposed. Key words: Trametopsis, Trametes, ribosomal DNA, polypore, taxonomy. Tomšovský M. (2008): Molekulární fylogenetika a taxonomické zařazení outkovky jelení, Trametes cervina, a popis nového rodu Trametopsis. – Czech Mycol. 60(1): 1–11. Outkovka jelení, Trametes cervina (Schwein.) Bres., se liší od ostatních zástupců rodu nápadnými morfologickými znaky (tvar rourek, hyfový systém). Také dříve uveřejněné srovnání sekvencí DNA v rámci rodu Trametes odhalilo významné rozdíly mezi tímto druhem a ostatními evropskými zástupci rodu. Uvedené výsledky byly nyní potvrzeny za použití sekvencí jaderné LSU a mitochondriální SSU oblasti ribozomální DNA, přičemž nejpříbuznějšími druhu Trametes cervina jsou Ceriporiopsis anei- rina a C. -
Identification of Volatile Organic Compound Producing Lignicolous Fungal Cultures from Gujarat, India
Available online at www.worldscientificnews.com WSN 90 (2017) 150-165 EISSN 2392-2192 Identification of volatile organic compound producing Lignicolous fungal cultures from Gujarat, India Praveen Kumar Nagadesi1,*, Arun Arya2, Duvvi Naveen Babu3, K. S. M. Prasad3, P. P. Devi3 1Department of Botany, P.G. section, Andhra Loyola College, Vijayawada - 520008, Andhra Pradesh, India 2Department of Botany, Faculty of Science, The Maharaja Sayajirao University of Baroda, Vadodara - 390002, Gujarat, India 3St. Joseph Dental College, Dugirala, Eluru, Andhra Pradesh, India *E-mail address: [email protected] ABSTRACT This study aims to identify the lignicolous basidiomycetes species that synthetize volatile organic compounds with potential applications in food industry, cosmetics, perfumery and agriculture. We have collected fruiting bodies from different woody plants and the lignicolous basidiomyctes species were identified by their macroscopic and microscopic characteristics. From the context of the fresh fruiting bodies small fragments of dikaryotic mycelium were extracted and inoculated on PDA and MEA media for isolation and pure cultures are kept in dark at a temperature of 25°C. 11 species of lignicolous basidiomycetes, belonging to 6 families and 5 orders were isolated in pure culture. The isolates were analyzed in vitro and the main characteristics that were observed are: the general aspect of the surface and the reverse of the colonies, the changing in colour and the growth rate of the mycelium and also the specific odour which indicates the presence of the organic volatile compounds. for the first time lignicolous fungi like Flavodon flavus (Klotz.) Ryv., Ganoderma lucidum(Curtis) P. Karst, Hexagonia apiaria (Pers.) Fr., Lenzites betulina (L.) Fr. -
Phylogenetic Analysis of Polyporous Fungi Collected from Batam Botanical Garden, Riau Province, Indonesia
Biosaintifika 10 (3) (2018) 510-518 Biosaintifika Journal of Biology & Biology Education http://journal.unnes.ac.id/nju/index.php/biosaintifika Phylogenetic Analysis of Polyporous Fungi Collected from Batam Botanical Garden, Riau Province, Indonesia Anis Sri Lestari, Deni Zulfiana, Apriwi Zulfitri, Ni Putu Ratna Ayu Krishanti, Titik Kartika DOI: http://dx.doi.org/10.15294/biosaintifika.v10i3.5829 Research Center for Biomaterials, Indonesian Institute of Sciences Indonesia History Article Abstract Received 24 April 2017 Botanical gardens are areas that provide protection for trees and other organisms Approved 19 September 2018 like polyporous fungi. Polyporous fungi are important fungi that degrade remain- Published 31 December 2018 ing lignocellulosic in leaf litter or dead trees. These mycobiota are also noted for their vital role in biorefinery, bioremediation, medicine and phytopathogen. The Keywords knowledge of the importance of the polyporous fungi to describe polyporous fungal Batam; Fungi; Poly- species is fundamental for generating data base information of their occurrence and porales; Polyporous their functions. This research’s goal was to explore and characterize the polyporous fungi collected in Batam Botanical Garden in three sampling areas. Fungal samples were collected in May and July 2017. Subsequently, morphological characters were recorded, the fungal tissue was isolated to extract the DNA, then the data sequence was amplified and aligned to construct a phylogenetic tree. Five fungal families found belong to order Polyporales and were classified morphologically. They were Polyporaceae, Ganodermataceae, Fomitopsidaceae, Irpicaceae and Hymeno- chaetaceae. Three fungal species namely; Pycnoporus sanguineus, Trametes ijubarskii, and Antrodia wangii were identified based on phyllogenetic analysis whereas seven other fungal samples were identified as Earliella scabrosa, Hexagonia tenuis, Polyporus tenuiculus Lenzites betulina, Lentinus concavus, Phellinus rimosus and Hexagonia apiaria. -
Polypore Diversity in North America with an Annotated Checklist
Mycol Progress (2016) 15:771–790 DOI 10.1007/s11557-016-1207-7 ORIGINAL ARTICLE Polypore diversity in North America with an annotated checklist Li-Wei Zhou1 & Karen K. Nakasone2 & Harold H. Burdsall Jr.2 & James Ginns3 & Josef Vlasák4 & Otto Miettinen5 & Viacheslav Spirin5 & Tuomo Niemelä 5 & Hai-Sheng Yuan1 & Shuang-Hui He6 & Bao-Kai Cui6 & Jia-Hui Xing6 & Yu-Cheng Dai6 Received: 20 May 2016 /Accepted: 9 June 2016 /Published online: 30 June 2016 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2016 Abstract Profound changes to the taxonomy and classifica- 11 orders, while six other species from three genera have tion of polypores have occurred since the advent of molecular uncertain taxonomic position at the order level. Three orders, phylogenetics in the 1990s. The last major monograph of viz. Polyporales, Hymenochaetales and Russulales, accom- North American polypores was published by Gilbertson and modate most of polypore species (93.7 %) and genera Ryvarden in 1986–1987. In the intervening 30 years, new (88.8 %). We hope that this updated checklist will inspire species, new combinations, and new records of polypores future studies in the polypore mycota of North America and were reported from North America. As a result, an updated contribute to the diversity and systematics of polypores checklist of North American polypores is needed to reflect the worldwide. polypore diversity in there. We recognize 492 species of polypores from 146 genera in North America. Of these, 232 Keywords Basidiomycota . Phylogeny . Taxonomy . species are unchanged from Gilbertson and Ryvarden’smono- Wood-decaying fungus graph, and 175 species required name or authority changes. -
Aegis Boa (Polyporales, Basidiomycota) a New Neotropical Genus and Species Based on Morphological Data and Phylogenetic Evidences
Mycosphere 8(6): 1261–1269 (2017) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/8/6/11 Copyright © Guizhou Academy of Agricultural Sciences Aegis boa (Polyporales, Basidiomycota) a new neotropical genus and species based on morphological data and phylogenetic evidences Gómez-Montoya N1, Rajchenberg M2 and Robledo GL 1, 3* 1 Laboratorio de Micología, Instituto Multidisciplinario de Biología Vegetal, Consejo Nacional de Investigaciones Científicas y Técnicas, Universidad Nacional de Córdoba, CC 495, CP 5000 Córdoba, Argentina 2 Centro de Investigación y Extensión Forestal Andino Patagónico (CIEFAP), C.C. 14, 9200 Esquel, Chubut and Universidad Nacional de la Patagonia S.J. Bosco, Ingeniería Forestal, Ruta 259 km 14.6, Esquel, Chubut, Argentina 3 Fundación FungiCosmos, Av. General Paz 54, 4to piso, of. 4, CP 5000, Córdoba, Argentina. Gómez-Montoya N, Rajchenberg M, Robledo GL. 2017 – Aegis boa (Polyporales, Basidiomycota) a new neotropical genus and species based on morphological data and phylogenetic evidences. Mycosphere 8(6), 1261–1269, Doi 10.5943/mycosphere/8/6/11 Abstract The new genus, Aegis Gómez-Montoya, Rajchenb. & Robledo, is described to accommodate the new species Aegis boa based on morphological data and phylogenetic evidences (ITS – LSU rDNA). It is characterized by a particular monomitic hyphal system with thick-walled, widening, inflated and constricted generative hyphae, and allantoid basidiospores. Phylogenetically Aegis is closely related to Antrodiella aurantilaeta, both species presenting an isolated position within Polyporales into Grifola clade. The new taxon is so far known from Yungas Mountain Rainforests of NW Argentina. Key words – Grifola – Neotropical polypores – Tyromyces Introduction Polypore diversity of NW Argentina was reviewed by Robledo & Rajchenberg (2007). -
Manaus, BRAZIL Macrofungi of the Adolpho Ducke Botanical Garden
Manaus, BRAZIL Macrofungi of the Adolpho Ducke Botanical Garden 1 Douglas de Moraes Couceiro, Kely da Silva Cruz, Maria Aparecida da Silva & Maria Aparecida de Jesus Instituto Nacional de Pesquisas da Amazônia, Coordenação de Tecnologia e Inovação, Manaus - AM Photos by Douglas de Moraes Couceiro, Kely da Silva Cruz, Maria Aparecida da Silva, and Maria Aparecida de Jesus, except where indicated. Produced by: Douglas de Moraes Couceiro with support from the Laboratory of Wood Pathology. Abbreviations: Ascomycota (A), Basidiomycota (B), Pileus (P), Hymenophore (H) © Douglas Couceiro [[email protected]] [fieldguides.fieldmuseum.org] [929] version 1 9/2017 1 Auricularia delicata 2 Camillea leprieurii 3 Camillea leprieurii 4 Caripia montagnei Auriculariales, Auriculariaceae (B) Xylariales, Xylariaceae (A) Xylariales, Xylariaceae (A) Agaricales, Omphalotaceae (B) 5 Clavaria zollingeri 6 Cookeina tricholoma 7 Crepidotus cf. variabilis 8 Dacryopinax spathularia Agaricales, Clavariaceae (B) Pezizales, Sarcoscyphaceae (A) Agaricales, Inocybaceae (B) Dacrymycetales, Dacrymycetaceae (B) 9 Daldinia concentrica 10 Favolus tenuiculus 11 Favolus tenuiculus 12 Flabellophora obovata Xylariales, Xylariaceae (A) Polyporales, Polyporaceae (B, P) Polyporales, Polyporaceae (B, H) Polyporales, Polyporaceae (B) 13 Flavodon flavus 14 Fomes fasciatus 15 Fomes fasciatus 16 Ganoderma applanatum Polyporales, Meruliaceae (B, H) Polyporales, Polyporaceae (B, P) Polyporales, Polyporaceae (B, H) Polyporales, Ganodermataceae (B, P) 17 Ganoderma applanatum 18 Geastrum -
Spongipellis Sibirica, Comb. Nova (Basidiomycetes), and Its Affinities to the Polypore Genera Tyromyces, Aurantioporus and Climacocystis
Ann. Bot. Fennici 38: 201–209 ISSN 0003-455X Helsinki 7 September 2001 © Finnish Zoological and Botanical Publishing Board 2001 Spongipellis sibirica, comb. nova (Basidiomycetes), and its affinities to the polypore genera Tyromyces, Aurantioporus and Climacocystis Heikki Kotiranta1 & Tatyana Penzina2 1) Finnish Environment Institute, Nature and Land Use Division, P.O. Box 140, FIN-00251 Helsinki, Finland (e-mail: heikki.kotiranta@vyh.fi) 2) Siberian Institute of Plant Physiology and Biochemistry, Siberian Branch of the Russian Academy of Sciences, P.O. Box 1243, Irkutsk 664033, Russia (e-mail: [email protected]) Received 15 January 2001, accepted 5 June 2001 Kotiranta, H. & Penzina, T. 2001: Spongipellis sibirica, comb. nova (Basidiomycetes), and its affinities to the polypore genera Tyromyces, Aurantioporus and Climacocystis. — Ann. Bot. Fennici 38: 201–209. The species was recently described as Tyromyces sibiricus Penzina & Ryvarden. The new combination Spongipellis sibirica (Penzina & Ryvarden) Penzina & Kotir. is proposed, based on microscopic characteristics, e.g., thick-walled, cyanophilous spores and the structure of the contextual hyphae. The microscopical details are described and illustrated, and comparisons made with the similar-looking species Aurantioporus fissilis (Berk. & M. A. Curtis) H. Jahn, Climacocystis borealis (Fr.) Kotl. & Pouzar and Spongipellis spumea (Sowerby: Fr.) Pat. The affinities to the genus Tyromyces P. Karsten are briefly discussed; S. sibirica lacks the special, spiny encrustations, characteristic of the species of Tyromyces. The species was earlier known from the type locality only. In this paper it is reported from Siberia, Buryat Rep., Lake Baykal, Russian Far East, Kamchatka and China. Key words: Aurantioporus, China, Climacocystis, Siberia, Spongipellis, taxonomy, Tyromyces 202 Kotiranta & Penzina • ANN.