Microtis Atrata Yellow Onion-Orchid
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Australian Endangered Orchid, Microtis Angusii: an Evaluation of the Utility of Dna Barcoding
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica FLANAGAN, NICOLA S.; PEAKALL, ROD; CLEMENTS, MARK A.; OTERO, J. TUPAC MOLECULAR GENETIC DIAGNOSIS OF THE ‘TAXONOMICALLY DIFFICULT’ AUSTRALIAN ENDANGERED ORCHID, MICROTIS ANGUSII: AN EVALUATION OF THE UTILITY OF DNA BARCODING. Lankesteriana International Journal on Orchidology, vol. 7, núm. 1-2, marzo, 2007, pp. 196-198 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339813040 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 7(1-2): 196-198. 2007. MOLECULAR GENETIC DIAGNOSIS OF THE ‘TAXONOMICALLY DIFFICULT’ AUSTRALIAN ENDANGERED ORCHID, MICROTIS ANGUSII: AN EVALUATION OF THE UTILITY OF DNA BARCODING. 1,3,5 1 2 2, 4 NICOLA S. FLANAGAN , ROD PEAKALL , MARK A. CLEMENTS & J. TUPAC OTERO 1 School of Botany and Zoology, The Australian National University, Canberra, ACT 0200, Australia. 2 Centre for Plant Biodiversity Research, GPO Box 1600 Canberra ACT 2601, Australia. 3 Genetics & Biotechnology, University College Cork, Ireland 4 Dept. de Ciencias Agricolas, Universidad Nacional de Colombia, Palmira, Valle, Colombia 5 Author for correspondence: [email protected] KEY WORDS: Species diagnosis, barcoding, practical outcomes, clonality, Internal Transcribed Sequences (ITS), Single Nucleotide Polymorphisms (SNPs) As species are the common currency for conserva- to the endangered Australian orchid, Microtis angusii tion efforts, their accurate description is essential for (Flanagan et al. -
Orchid Historical Biogeography, Diversification, Antarctica and The
Journal of Biogeography (J. Biogeogr.) (2016) ORIGINAL Orchid historical biogeography, ARTICLE diversification, Antarctica and the paradox of orchid dispersal Thomas J. Givnish1*, Daniel Spalink1, Mercedes Ames1, Stephanie P. Lyon1, Steven J. Hunter1, Alejandro Zuluaga1,2, Alfonso Doucette1, Giovanny Giraldo Caro1, James McDaniel1, Mark A. Clements3, Mary T. K. Arroyo4, Lorena Endara5, Ricardo Kriebel1, Norris H. Williams5 and Kenneth M. Cameron1 1Department of Botany, University of ABSTRACT Wisconsin-Madison, Madison, WI 53706, Aim Orchidaceae is the most species-rich angiosperm family and has one of USA, 2Departamento de Biologıa, the broadest distributions. Until now, the lack of a well-resolved phylogeny has Universidad del Valle, Cali, Colombia, 3Centre for Australian National Biodiversity prevented analyses of orchid historical biogeography. In this study, we use such Research, Canberra, ACT 2601, Australia, a phylogeny to estimate the geographical spread of orchids, evaluate the impor- 4Institute of Ecology and Biodiversity, tance of different regions in their diversification and assess the role of long-dis- Facultad de Ciencias, Universidad de Chile, tance dispersal (LDD) in generating orchid diversity. 5 Santiago, Chile, Department of Biology, Location Global. University of Florida, Gainesville, FL 32611, USA Methods Analyses use a phylogeny including species representing all five orchid subfamilies and almost all tribes and subtribes, calibrated against 17 angiosperm fossils. We estimated historical biogeography and assessed the -
Western Australian Orchids
Newsletter of the Land for Wildlife Scheme April 2008 Vol. 12, Number 2 NEWSLETTER OF THE LAND FOR WILDLIFE SCHEME REGISTERED BY AUSTRALIA POST PRINT POST: 606811/00007 WESTERN AUSTRALIAN ORCHIDS - THE MASTERS OF DECEIT (PART 2) Andrew Brown The attraction of male insects to flowers under sexually such as the spider orchids (Caladenia). The biggest and false pretences, often termed pseudocopulation, is used most conspicuous part of a hammer orchid flower is its by several south-western orchid groups in which the lip, which resembles to a remarkable degree a female flowers share certain characteristics with the female flower wasp. Pollination is achieved by sexual deception insect. Their colours, for instance, are usually dull shades of the male wasp, which is flung over and upside down of green, yellow and maroon and they are usually, but against the column when it attempts to fly off with the not always, odourless to humans. However, all produce female decoy. Each species of Drakaea is thought to be powerful chemical lures that are irresistible to male pollinated by a different species of wasp and illustrates one pollinating insects. These 'sex pheromones' appear to of the most specialised relationships between pollinator be especially active on still, warm days, particularly and plant known to occur in Australia, and indeed the from mid morning to early-afternoon. The dragon orchid world. (Caladenia barbarossa) is a superb example with its Yet another group insectiform lip closely matching the size, shape and of orchids that use texture of a female flower wasp. sexual deception are species of duck orchid ( Paracaleana) . -
Redalyc.ARE OUR ORCHIDS SAFE DOWN UNDER?
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica BACKHOUSE, GARY N. ARE OUR ORCHIDS SAFE DOWN UNDER? A NATIONAL ASSESSMENT OF THREATENED ORCHIDS IN AUSTRALIA Lankesteriana International Journal on Orchidology, vol. 7, núm. 1-2, marzo, 2007, pp. 28- 43 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339813005 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 7(1-2): 28-43. 2007. ARE OUR ORCHIDS SAFE DOWN UNDER? A NATIONAL ASSESSMENT OF THREATENED ORCHIDS IN AUSTRALIA GARY N. BACKHOUSE Biodiversity and Ecosystem Services Division, Department of Sustainability and Environment 8 Nicholson Street, East Melbourne, Victoria 3002 Australia [email protected] KEY WORDS:threatened orchids Australia conservation status Introduction Many orchid species are included in this list. This paper examines the listing process for threatened Australia has about 1700 species of orchids, com- orchids in Australia, compares regional and national prising about 1300 named species in about 190 gen- lists of threatened orchids, and provides recommen- era, plus at least 400 undescribed species (Jones dations for improving the process of listing regionally 2006, pers. comm.). About 1400 species (82%) are and nationally threatened orchids. geophytes, almost all deciduous, seasonal species, while 300 species (18%) are evergreen epiphytes Methods and/or lithophytes. At least 95% of this orchid flora is endemic to Australia. -
25. MICROTIS R. Brown, Prodr. 320. 1810. 葱叶兰属 Cong Ye Lan Shu Chen Xinqi (陈心启 Chen Sing-Chi); Stephan W
Flora of China 25: 89–90. 2009. 25. MICROTIS R. Brown, Prodr. 320. 1810. 葱叶兰属 cong ye lan shu Chen Xinqi (陈心启 Chen Sing-chi); Stephan W. Gale, Phillip J. Cribb Herbs, terrestrial, small. Tubers subglobose, to 1 cm in diam., fleshy; roots wiry, filamentous. Stem erect, slender, with mem- branous cataphylls at nodes. Leaf basal, solitary, cylindric, slender, hollow, glabrous, basally amplexicaul, sessile. Inflorescence ter- minal, racemose, with several to many flowers, emerging through opening in leaf; floral bracts small, sheathing. Flowers resupinate, small; ovary ribbed, glabrous; pedicel extremely short. Dorsal sepal free, erect, similar to but larger than lateral sepals, cucullate over column; lateral sepals free, spreading. Petals free, smaller than sepals; lip adnate to base of column, usually with basal callus adaxially, entire or sometimes apically emarginate, spurless. Column very short, fleshy, with 2 wings apically or laterally; anther erect, 2-locular; stigma entire, quadrate; pollinia 4, in 2 pairs, granular-farinaceous, with short caudicle and viscidium. Capsule erect. About 14 species: mainly in Australia and New Zealand, with one species extending to tropical and subtropical Asia; one species in China. 1. Microtis unifolia (G. Forster) H. G. Reichenbach, Beitr. Syst. Pflanzenk. 62. 1871. 葱叶兰 cong ye lan Ophrys unifolia G. Forster, Fl. Ins. Austr. 59. 1786; Micro- tis formosana Schlechter; M. parviflora R. Brown. Plants 15–30 cm tall. Tuber small, 4–7 × 3–6 mm. Leaf erect or suberect, 16–33 × 0.2–0.3 cm, adaxially channeled. In- florescence usually more than 10-flowered, emergent through opening in lower half of leaf; rachis 2.5–5 cm; floral bracts nar- rowly ovate-lanceolate, 1–2 mm. -
ACT, Australian Capital Territory
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Ingleside –Angus's Onion Orchid (Microtis Angusii) – Survey Results
Ingleside –Angus’s Onion Orchid (Microtis angusii) – Survey Results Dr Steven Ward Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Background • Cryptic (hard to detect) plant • Listed as Endangered Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Background • Need to survey when flowering (Sep - Oct) • Genetic testing to confirm identification • Often occurs in roadside edge habitat • Roads and Maritime results used to generate a habitat model Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Habitat Model Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Methods • Known population checked every 2 weeks • Survey done over two weeks (Sep - Oct) • Two teams of 2 ecologists = 40 person days • Habitat of modelled higher potential targeted • GPS points taken when located • Number of plants counted • Small piece(s) of leaf sample taken and sent off for genetic analysis • Also surveyed adjoining National Parks (map on next slide) Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Field Survey Sites Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Results - Field • Field identifications of four (4) Microtis species: – Microtis angusii - low numbers (Endangered) – Microtis unifolia – high numbers – Microtis parviflora – high numbers – Microtis rara – low numbers • Some large populations of Microtis, generally in the road corridors – map on next slide. Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Microtis Map Document Set ID: 5284144 (all species) Version: 1, Version Date: 09/12/2015 Results – Genetic Testing 1 = Estimate for two large • The key genetic results were : populations of Microtis parviflora – Zero Microtis unifolia (field = high no’s) – Many Microtis angusii (field = low no’s) Document Set ID: 5284144 Version: 1, Version Date: 09/12/2015 Why the Difference? • Two possibilities : 1. -
Biodiversity and Functioning of Terrestrial Food Webs : Application to Transfers of Trace Metals
Biodiversity and functioning of terrestrial food webs : application to transfers of trace metals. Shinji Ozaki To cite this version: Shinji Ozaki. Biodiversity and functioning of terrestrial food webs : application to transfers of trace metals.. Agricultural sciences. Université Bourgogne Franche-Comté, 2019. English. NNT : 2019UBFCD018. tel-02555117 HAL Id: tel-02555117 https://tel.archives-ouvertes.fr/tel-02555117 Submitted on 27 Apr 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. THESE DE DOCTORAT De l’etablissement Université Bourgogne Franche-Comté Preparée au Laboratoire UMR CNRS 6249 Chrono-Environnement École doctorale n°554 Environnements – Santé Doctorat de Sciences de la Terre et de l’Environnement Par M. Shinji Ozaki Biodiversité et fonctionnement des réseaux trophiques terrestres : Application aux transferts d’éléments traces métalliques. Thèse présentée et soutenue à Besançon, le 18 juin 2019 Composition du Jury : Mme. Sandrine Charles Professeure, Université Claude Bernard Lyon 1 Présidente ; Examinatrice Mme. Elena Gomez Professeure, Université de Montpellier Rapporteure M. Nico van den Brink Associate Professeur, Wageningen University Rapporteur M. Renaud Scheifler Maître de conférences, HDR, Université Bourgogne Franche-Comté Directeur de thèse M. Francis Raoul Maître de conférences, HDR, Université Bourgogne Franche-Comté Co-directeur de thèse Mme. -
Dating the Origin of the Orchidaceae from a Fossil Orchid with Its Pollinator
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/6111228 Dating the origin of the Orchidaceae from a fossil orchid with its pollinator Article in Nature · September 2007 DOI: 10.1038/nature06039 · Source: PubMed CITATIONS READS 211 770 5 authors, including: Santiago R Ramírez Barbara Gravendeel University of California, Davis Leiden University, Naturalis Biodiversity Center & University of Applied Sciences L… 50 PUBLICATIONS 999 CITATIONS 208 PUBLICATIONS 2,081 CITATIONS SEE PROFILE SEE PROFILE Rodrigo B. Singer Naomi E Pierce Universidade Federal do Rio Grande do Sul Harvard University 109 PUBLICATIONS 1,381 CITATIONS 555 PUBLICATIONS 6,496 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Insect endosymbiont diversity View project Support threatened research Institutions from Southern Brazil (Rio Grande do Sul) View project All content following this page was uploaded by Barbara Gravendeel on 31 May 2014. The user has requested enhancement of the downloaded file. Vol 448 | 30 August 2007 | doi:10.1038/nature06039 LETTERS Dating the origin of the Orchidaceae from a fossil orchid with its pollinator Santiago R. Ramı´rez1, Barbara Gravendeel2, Rodrigo B. Singer3, Charles R. Marshall1,4 & Naomi E. Pierce1 Since the time of Darwin1, evolutionary biologists have been fas- subfamily showed that the size, shape and ornamentation of the cinated by the spectacular adaptations to insect pollination exhib- fossil closely resemble those of modern members of the subtribe ited by orchids. However, despite being the most diverse plant Goodyerinae, particularly the genera Kreodanthus and Microchilus family on Earth2, the Orchidaceae lack a definitive fossil record (Supplementary Table 1). -
The Genus Microtis R. Br. (Orchidaceae): a Taxonomic Revision with Notes on Biology
J. Adelaide Bot. Gard. 7(1): 45-89 (1984) THE GENUS MICROTIS R. BR. (ORCHIDACEAE): A TAXONOMIC REVISION WITH NOTES ON BIOLOGY R. Bates 38 Portmamock Street, Fairview Park, South Australia 5126 Abstract A taxonomic revision of Micro lis is presented in which nine species are recognised; M. globula is described as new. M. brownii, M. magnadenia and M. truncata are placed in synonymy with M. rara. M. media is treatéd as a synonym of M. unifolia. The biology, taxonomic affinities and distribution are considered for each species, a key is provided and a detailed description of each species is supplemented with illustrations. Introduction Since Robert Brown (1810) described Microtis there have been numerous taxa added but no complete revision has appeared, nor has any flora dealt with all species. Bentham (1873, p. 269) when discussing the difficulty of determining many Australian orchids, including Microtis, from dried material wrote, "It is to be hoped that the revision of these ... vvill be taken on byresident botanists who have the opportunity of studying them in the fresh state". With this in mind the present author has observed, photographed and collected all species of Microtis in the process of completing this revision. Plants were obtained from as many locations as possible and cultivated in Adelaide and populations of all Australian species studied in the field. Endophytic soil fungi on Microtis were isolated and identified by Dr J. Warcup (Waite Agricultural Research Institute). Chromosome counts were attempted but results were inconclusive. Loans were obtained from numerous herbaria (see acknowledgements). Types of all taxa were examined unless otherwise indicated in the text. -
080058-92.02.002.Pdf
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Interim Report (April 2018) Biological Survey: Kojaneerup Project South Coast Highway, 46.4 to 65.7 SLK
Interim Report (April 2018) Biological Survey: Kojaneerup Project South Coast Highway, 46.4 to 65.7 SLK Report prepared for Main Roads Western Australia April 2018 Damien Rathbone | Ecologist [email protected] www.southernecology.com.au 0408 802 404 Assessment for: Main Roads Western Australia Great Southern Region Chester Pass Road PO Box 503 Albany WA 6331 Prepared by: Southern Ecology [email protected] www.southernecology.com.au 0408 802 404 27 Newbold Rd Torbay WA 6330 Project Reference: SE1714 © DA Rathbone 2018. Reproduction of this report and maps in whole or in part is prohibited without the approval of the author or the client. The information provided within this report is accurate and correct to the best of the author’s knowledge. No liability is accepted for loss, damage or injury arising from its use. The report should be read, distributed and referred to in its entirety. Citation: Rathbone, DA (2018). Interim Report (April 2018) Biological Survey: Kojaneerup Project South Coast Highway, 46.4 to 65.7 SLK. Unpublished report by Southern Ecology for Main Roads Western Australia (SE1714). 2 | Biological Survey: Kojaneerup Project South Coast Highway, 46.4 to 65.7 SLK REPORT CONTENTS 1 SUMMARY ............................................................................................................................... 4 2 INTRODUCTION ....................................................................................................................... 5 3 METHODS ...............................................................................................................................