Surface Microornamentation of Demosponge Sterraster Spicules, Phylogenetic and Paleontological Implications
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Reef Sponges of the Genus Agelas (Porifera: Demospongiae) from the Greater Caribbean
Zootaxa 3794 (3): 301–343 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3794.3.1 http://zoobank.org/urn:lsid:zoobank.org:pub:51852298-F299-4392-9C89-A6FD14D3E1D0 Reef sponges of the genus Agelas (Porifera: Demospongiae) from the Greater Caribbean FERNANDO J. PARRA-VELANDIA1,2, SVEN ZEA2,4 & ROB W. M. VAN SOEST3 1St John's Island Marine Laboratory, Tropical Marine Science Institute (TMSI), National University of Singapore, 18 Kent Ridge Road, Singapore 119227. E-mail: [email protected] 2Universidad Nacional de Colombia, Sede Caribe, Centro de Estudios en Ciencias del Mar—CECIMAR; c/o INVEMAR, Calle 25 2- 55, Rodadero Sur, Playa Salguero, Santa Marta, Colombia. E-mail: [email protected] 3Netherlands Centre for Biodiversity Naturalis, P.O.Box 9517 2300 RA Leiden, The Netherlands. E-mail: [email protected] 4Corresponding author Table of contents Abstract . 301 Introduction . 302 The genus Agelas in the Greater Caribbean . 302 Material and methods . 303 Classification . 304 Phylum Porifera Grant, 1835 . 304 Class Demospongiae Sollas, 1875 . 304 Order Agelasida Hartman, 1980 . 304 Family Agelasidae Verrill, 1907 . 304 Genus Agelas Duchassaing & Michelotti, 1864 . 304 Agelas dispar Duchassaing & Michelotti, 1864 . 306 Agelas cervicornis (Schmidt, 1870) . 311 Agelas wiedenmayeri Alcolado, 1984. 313 Agelas sceptrum (Lamarck, 1815) . 315 Agelas dilatata Duchassaing & Michelotti, 1864 . 316 Agelas conifera (Schmidt, 1870). 318 Agelas tubulata Lehnert & van Soest, 1996 . 321 Agelas repens Lehnert & van Soest, 1998. 324 Agelas cerebrum Assmann, van Soest & Köck, 2001. 325 Agelas schmidti Wilson, 1902 . -
Taxonomy and Diversity of the Sponge Fauna from Walters Shoal, a Shallow Seamount in the Western Indian Ocean Region
Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region By Robyn Pauline Payne A thesis submitted in partial fulfilment of the requirements for the degree of Magister Scientiae in the Department of Biodiversity and Conservation Biology, University of the Western Cape. Supervisors: Dr Toufiek Samaai Prof. Mark J. Gibbons Dr Wayne K. Florence The financial assistance of the National Research Foundation (NRF) towards this research is hereby acknowledged. Opinions expressed and conclusions arrived at, are those of the author and are not necessarily to be attributed to the NRF. December 2015 Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region Robyn Pauline Payne Keywords Indian Ocean Seamount Walters Shoal Sponges Taxonomy Systematics Diversity Biogeography ii Abstract Taxonomy and diversity of the sponge fauna from Walters Shoal, a shallow seamount in the Western Indian Ocean region R. P. Payne MSc Thesis, Department of Biodiversity and Conservation Biology, University of the Western Cape. Seamounts are poorly understood ubiquitous undersea features, with less than 4% sampled for scientific purposes globally. Consequently, the fauna associated with seamounts in the Indian Ocean remains largely unknown, with less than 300 species recorded. One such feature within this region is Walters Shoal, a shallow seamount located on the South Madagascar Ridge, which is situated approximately 400 nautical miles south of Madagascar and 600 nautical miles east of South Africa. Even though it penetrates the euphotic zone (summit is 15 m below the sea surface) and is protected by the Southern Indian Ocean Deep- Sea Fishers Association, there is a paucity of biodiversity and oceanographic data. -
Appendix: Some Important Early Collections of West Indian Type Specimens, with Historical Notes
Appendix: Some important early collections of West Indian type specimens, with historical notes Duchassaing & Michelotti, 1864 between 1841 and 1864, we gain additional information concerning the sponge memoir, starting with the letter dated 8 May 1855. Jacob Gysbert Samuel van Breda A biography of Placide Duchassaing de Fonbressin was (1788-1867) was professor of botany in Franeker (Hol published by his friend Sagot (1873). Although an aristo land), of botany and zoology in Gent (Belgium), and crat by birth, as we learn from Michelotti's last extant then of zoology and geology in Leyden. Later he went to letter to van Breda, Duchassaing did not add de Fon Haarlem, where he was secretary of the Hollandsche bressin to his name until 1864. Duchassaing was born Maatschappij der Wetenschappen, curator of its cabinet around 1819 on Guadeloupe, in a French-Creole family of natural history, and director of Teyler's Museum of of planters. He was sent to school in Paris, first to the minerals, fossils and physical instruments. Van Breda Lycee Louis-le-Grand, then to University. He finished traveled extensively in Europe collecting fossils, especial his studies in 1844 with a doctorate in medicine and two ly in Italy. Michelotti exchanged collections of fossils additional theses in geology and zoology. He then settled with him over a long period of time, and was received as on Guadeloupe as physician. Because of social unrest foreign member of the Hollandsche Maatschappij der after the freeing of native labor, he left Guadeloupe W etenschappen in 1842. The two chief papers of Miche around 1848, and visited several islands of the Antilles lotti on fossils were published by the Hollandsche Maat (notably Nevis, Sint Eustatius, St. -
Bioactive Compounds from the Marine Sponge Geodia Barretti
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy 32 Bioactive Compounds from the Marine Sponge Geodia barretti Characterization, Antifouling Activity and Molecular Targets MARTIN SJÖGREN ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6192 UPPSALA ISBN 91-554-6534-X 2006 urn:nbn:se:uu:diva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eodia barretti , s y m ' i " Balanus improvius a ' 56C! ! %& ' ! ' ( )*+' ' ,-*)./0 ' # E ./0' #$ 4..5 $6$%# 4.5 %676$768 -
Lithistid’ Tetractinellid
1 Systematics of ‘lithistid’ tetractinellid 2 demosponges from the Tropical Western 3 Atlantic – implications for phylodiversity 4 and bathymetric distribution 1,2 3 4 5 Astrid Schuster , Shirley A. Pomponi , Andrzej Pisera , Paco 5 6 1,7,8 1,8 6 Cardenas´ , Michelle Kelly , Gert Worheide¨ , and Dirk Erpenbeck 1 7 Department of Earth- & Environmental Sciences, Palaeontology and Geobiology, 8 Ludwig-Maximilians-Universitat¨ M ¨unchen, Richard-Wagner Str. 10, 80333 Munich, 9 Germany 2 10 Current address: Department of Biology, NordCEE, Southern University of Denmark, 11 Campusvej 55, 5300 M Odense, Denmark 3 12 Harbor Branch Oceanographic Institute, Florida Atlantic University, 5600 U.S. 1 North, 13 Ft Pierce, FL 34946, USA 4 14 Institute of Paleobiology, Polish Academy of Sciences, ul. Twarda 51/55, 00-818 15 Warszawa, Poland 5 16 Pharmacognosy, Department of Medicinal Chemistry, Uppsala University, Husargatan 17 3, 75123 Uppsala, Sweden 6 18 National Centre for Coasts and Oceans, National Institute of Water and Atmospheric 19 Research, Private Bag 99940, Newmarket, Auckland, 1149, New Zealand 7 20 SNSB-Bayerische Staatssammlung f ¨urPalaontologie¨ und Geologie, Richard-Wagner 21 Str. 10, 80333 Munich, Germany 8 22 GeoBio-CenterLMU, Ludwig-Maximilians-Universitat¨ M ¨unchen, Richard-Wagner Str. 10, 23 80333 Munich, Germany 24 Corresponding author: 1,8 25 Dirk Erpenbeck 26 Email address: [email protected] 27 ABSTRACT PeerJ Preprints | https://doi.org/10.7287/peerj.preprints.27673v1 | CC BY 4.0 Open Access | rec: 22 Apr 2019, publ: 22 Apr 2019 28 Background Among all present demosponges, lithistids represent a polyphyletic group with 29 exceptionally well preserved fossils dating back to the Cambrian. -
A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution
marine drugs Review A Soft Spot for Chemistry–Current Taxonomic and Evolutionary Implications of Sponge Secondary Metabolite Distribution Adrian Galitz 1 , Yoichi Nakao 2 , Peter J. Schupp 3,4 , Gert Wörheide 1,5,6 and Dirk Erpenbeck 1,5,* 1 Department of Earth and Environmental Sciences, Palaeontology & Geobiology, Ludwig-Maximilians-Universität München, 80333 Munich, Germany; [email protected] (A.G.); [email protected] (G.W.) 2 Graduate School of Advanced Science and Engineering, Waseda University, Shinjuku-ku, Tokyo 169-8555, Japan; [email protected] 3 Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl-von-Ossietzky University Oldenburg, 26111 Wilhelmshaven, Germany; [email protected] 4 Helmholtz Institute for Functional Marine Biodiversity, University of Oldenburg (HIFMB), 26129 Oldenburg, Germany 5 GeoBio-Center, Ludwig-Maximilians-Universität München, 80333 Munich, Germany 6 SNSB-Bavarian State Collection of Palaeontology and Geology, 80333 Munich, Germany * Correspondence: [email protected] Abstract: Marine sponges are the most prolific marine sources for discovery of novel bioactive compounds. Sponge secondary metabolites are sought-after for their potential in pharmaceutical applications, and in the past, they were also used as taxonomic markers alongside the difficult and homoplasy-prone sponge morphology for species delineation (chemotaxonomy). The understanding Citation: Galitz, A.; Nakao, Y.; of phylogenetic distribution and distinctiveness of metabolites to sponge lineages is pivotal to reveal Schupp, P.J.; Wörheide, G.; pathways and evolution of compound production in sponges. This benefits the discovery rate and Erpenbeck, D. A Soft Spot for yield of bioprospecting for novel marine natural products by identifying lineages with high potential Chemistry–Current Taxonomic and Evolutionary Implications of Sponge of being new sources of valuable sponge compounds. -
Functional Equivalence and Evolutionary Convergence In
Functional equivalence and evolutionary convergence PNAS PLUS in complex communities of microbial sponge symbionts Lu Fana,b, David Reynoldsa,b, Michael Liua,b, Manuel Starkc,d, Staffan Kjelleberga,b,e, Nicole S. Websterf, and Torsten Thomasa,b,1 aSchool of Biotechnology and Biomolecular Sciences and bCentre for Marine Bio-Innovation, University of New South Wales, Sydney, New South Wales 2052, Australia; cInstitute of Molecular Life Sciences and dSwiss Institute of Bioinformatics, University of Zurich, 8057 Zurich, Switzerland; eSingapore Centre on Environmental Life Sciences Engineering, Nanyang Technological University, Republic of Singapore; and fAustralian Institute of Marine Science, Townsville, Queensland 4810, Australia Edited by W. Ford Doolittle, Dalhousie University, Halifax, NS, Canada, and approved May 21, 2012 (received for review February 24, 2012) Microorganisms often form symbiotic relationships with eukar- ties (11, 12). Symbionts also can be transmitted vertically through yotes, and the complexity of these relationships can range from reproductive cells and larvae, as has been demonstrated in those with one single dominant symbiont to associations with sponges (13, 14), insects (15), ascidians (16), bivalves (17), and hundreds of symbiont species. Microbial symbionts occupying various other animals (18). Vertical transmission generally leads equivalent niches in different eukaryotic hosts may share func- to microbial communities with limited variation in taxonomy and tional aspects, and convergent genome evolution has been function among host individuals. reported for simple symbiont systems in insects. However, for Niches with similar selections may exist in phylogenetically complex symbiont communities, it is largely unknown how prev- divergent hosts that lead comparable lifestyles or have similar alent functional equivalence is and whether equivalent functions physiological properties. -
(Polyplacophora: Leptochitonidae) and Its Phylogenetic Affinities
Journal of Systematic Palaeontology 5 (2): 123–132 Issued 25 May 2007 doi:10.1017/S1477201906001982 Printed in the United Kingdom C The Natural History Museum First record of a chiton from the Palaeocene of Denmark (Polyplacophora: Leptochitonidae) and its phylogenetic affinities Julia D. Sigwart National Museum of Ireland, Natural History Division, Merrion Street, Dublin 2, Ireland & School of Biology and Biochemistry, Queens University Belfast, BT7 1NN, UK Søren Bo Andersen Department of Earth Sciences, Aarhus University, DK – 8000 Aarhus C, Denmark Kai Ingemann Schnetler Fuglebakken 14, Stevnstrup, DK – 8870 Lang˚a, Denmark SYNOPSIS A new species of fossil polyplacophoran from the Danian (Lower Palaeocene) of Denmark is described from over 450 individual disarticulated plates. The polyplacophorans originate from the ‘nose-chalk’ in the classical Danish locality of Fakse Quarry, an unconsolidated coral limestone in whicharagoniticmolluscshellsarepreserved throughtransformation intocalcite.In platearchitecture and sculpture, the new Danish material is similar to Recent Leptochiton spp., but differs in its underdeveloped apophyses and high dorsal elevation (height/width ca. 0.54). Cladistic analysis of 55 original shell characters coded for more than 100 Recent and fossil species in the order Lepidopleurida shows very high resolution of interspecific relationships, but does not consistently recover traditional genera or subgenera. Inter-relationships within the suborder Lepidopleurina are of particular interest as it is often considered the most ‘basal’ neoloricate lineage. In a local context, the presence of chitons in the faunal assemblage of Fakse contributes evidence of shallow depositional depth for at least some elements of this Palaeocene seabed, a well-studied formation of azooxanthellic coral limestones. -
Proposal for a Revised Classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3*
Morrow and Cárdenas Frontiers in Zoology (2015) 12:7 DOI 10.1186/s12983-015-0099-8 DEBATE Open Access Proposal for a revised classification of the Demospongiae (Porifera) Christine Morrow1 and Paco Cárdenas2,3* Abstract Background: Demospongiae is the largest sponge class including 81% of all living sponges with nearly 7,000 species worldwide. Systema Porifera (2002) was the result of a large international collaboration to update the Demospongiae higher taxa classification, essentially based on morphological data. Since then, an increasing number of molecular phylogenetic studies have considerably shaken this taxonomic framework, with numerous polyphyletic groups revealed or confirmed and new clades discovered. And yet, despite a few taxonomical changes, the overall framework of the Systema Porifera classification still stands and is used as it is by the scientific community. This has led to a widening phylogeny/classification gap which creates biases and inconsistencies for the many end-users of this classification and ultimately impedes our understanding of today’s marine ecosystems and evolutionary processes. In an attempt to bridge this phylogeny/classification gap, we propose to officially revise the higher taxa Demospongiae classification. Discussion: We propose a revision of the Demospongiae higher taxa classification, essentially based on molecular data of the last ten years. We recommend the use of three subclasses: Verongimorpha, Keratosa and Heteroscleromorpha. We retain seven (Agelasida, Chondrosiida, Dendroceratida, Dictyoceratida, Haplosclerida, Poecilosclerida, Verongiida) of the 13 orders from Systema Porifera. We recommend the abandonment of five order names (Hadromerida, Halichondrida, Halisarcida, lithistids, Verticillitida) and resurrect or upgrade six order names (Axinellida, Merliida, Spongillida, Sphaerocladina, Suberitida, Tetractinellida). Finally, we create seven new orders (Bubarida, Desmacellida, Polymastiida, Scopalinida, Clionaida, Tethyida, Trachycladida). -
Comparing Deep-Sea Sponges of the Species Geodia Barretti from Different Locations in the North Atlantic
Comparing deep-sea sponges of the species Geodia barretti from different locations in the North Atlantic Isabel Ordaz Németh The study of genetic and geographic structures of populations for poorly studied species is not exactly straightforward. It is difficult to accurately compare populations of a species from which no genetic data is available. So, is there a way of comparing populations of such as species? There is one possibility, which is by using genetic markers called “Exon-Primed Intron- Crossing” (EPIC) markers. These markers, which are first designed for well-studied species, find a specific piece of DNA that all individuals of a species have. So, by using the markers we can, for example, take the same DNA fragment from several individuals that come from different locations. Then we translate the DNA fragments of these individuals and look at how different they are. This can give us a lot of information about the relationships within and between the populations of a species, as well as its history. Since a lot of genetic information is conserved across different species, we can test these markers on a species that we barely know, and the probability of finding a corresponding DNA fragment can still be quite high. EPIC markers could be very useful for different studies but they haven’t been extensively used since they are relatively new. In this project, the markers were tested on samples of the deep-sea sponge Geodia barretti. The sponges that were used came from different locations; from the Mediterranean Sea, to the coast of Norway, and all the way to the other side of the Atlantic, by the Eastern coast of Canada. -
Chitons (Mollusca: Polyplacophora) Known from Benthic Monitoring Programs in the Southern California Bight
ISSN 0738-9388 THE FESTIVUS A publication of the San Diego Shell Club Volume XLI Special Issue June 11, 2009 Chitons (Mollusca: Polyplacophora) Known from Benthic Monitoring Programs in the Southern California Bight Timothy D. Stebbins and Douglas J. Eernisse COVER PHOTO Live specimen of Lepidozona sp. C occurring on a piece of metal debris collected off San Diego, southern California at a depth of 90 m. Photo provided courtesy of R. Rowe. Vol. XLI(6): 2009 THE FESTIVUS Page 53 CHITONS (MOLLUSCA: POLYPLACOPHORA) KNOWN FROM BENTHIC MONITORING PROGRAMS IN THE SOUTHERN CALIFORNIA BIGHT TIMOTHY D. STEBBINS 1,* and DOUGLAS J. EERNISSE 2 1 City of San Diego Marine Biology Laboratory, Metropolitan Wastewater Department, San Diego, CA, USA 2 Department of Biological Science, California State University, Fullerton, CA, USA Abstract: About 36 species of chitons possibly occur at depths greater than 30 m along the continental shelf and slope of the Southern California Bight (SCB), although little is known about their distribution or ecology. Nineteen species are reported here based on chitons collected as part of long-term, local benthic monitoring programs or less frequent region-wide surveys of the entire SCB, and these show little overlap with species that occur at depths typically encountered by scuba divers. Most chitons were collected between 30-305 m depths, although records are included for a few from slightly shallower waters. Of the two extant chiton lineages, Lepidopleurida is represented by Leptochitonidae (2 genera, 3 species), while Chitonida is represented by Ischnochitonidae (2 genera, 6-9 species) and Mopaliidae (4 genera, 7 species). -
Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia
Diversity 2016, 8, 21; doi:10.3390/d8040021 S1 of S3 9 Supplementary Materials: Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia Jane Fromont, Muhammad Azmi Abdul Wahab, Oliver Gomez, Merrick Ekins, Monique Grol and John Norman Ashby Hooper 1. Materials and Methods 1.1. Collation of Sponge Occurrence Data Data of sponge occurrences were collated from databases of the Western Australian Museum (WAM) and Atlas of Living Australia (ALA) [1]. Pilbara sponge data on ALA had been captured in a northern Australian sponge report [2], but with the WAM data, provides a far more comprehensive dataset, in both geographic and taxonomic composition of sponges. Quality control procedures were undertaken to remove obvious duplicate records and those with insufficient or ambiguous species data. Due to differing naming conventions of OTUs by institutions contributing to the two databases and the lack of resources for physical comparison of all OTU specimens, a maximum error of ± 13.5% total species counts was determined for the dataset, to account for potentially unique (differently named OTUs are unique) or overlapping OTUs (differently named OTUs are the same) (157 potential instances identified out of 1164 total OTUs). The amalgamation of these two databases produced a complete occurrence dataset (presence/absence) of all currently described sponge species and OTUs from the region (see Table S1). The dataset follows the new taxonomic classification proposed by [3] and implemented by [4]. The latter source was used to confirm present validities and taxon authorities for known species names. The dataset consists of records identified as (1) described (Linnean) species, (2) records with “cf.” in front of species names which indicates the specimens have some characters of a described species but also differences, which require comparisons with type material, and (3) records as “operational taxonomy units” (OTUs) which are considered to be unique species although further assessments are required to establish their taxonomic status.