A Survey of Root Pressure in 53 Asian Species of Bamboo Wang, Tian, Ding, Wan, M
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Phylogenomic Analyses Reveal Intractable Evolutionary History of a Temperate Bamboo Genus (Poaceae: Bambusoideae)
Plant Diversity 41 (2019) 213e219 Contents lists available at ScienceDirect Plant Diversity journal homepage: http://www.keaipublishing.com/en/journals/plant-diversity/ http://journal.kib.ac.cn Phylogenomic analyses reveal intractable evolutionary history of a temperate bamboo genus (Poaceae: Bambusoideae) ** * Cen Guo a, b, Zhen-Hua Guo a, , De-Zhu Li a, a Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, 650201, China b Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan, 650201, China article info abstract Article history: Shibataea is a genus of temperate bamboos (Poaceae: Bambusoideae) endemic to China, but little is Received 12 March 2019 known about its phylogenetic position and interspecific relationships. To elucidate the phylogenetic Received in revised form relationship of the bamboo genus Shibataea, we performed genome-scale phylogenetic analysis of all 24 May 2019 seven species and one variety of the genus using double digest restriction-site associated DNA Accepted 25 May 2019 sequencing (ddRAD-seq) and whole plastid genomes generated using genome skimming. Our phyloge- Available online 31 May 2019 nomic analyses based on ddRAD-seq and plastome data congruently recovered Shibataea as mono- phyletic. The nuclear data resolved S. hispida as the earliest diverged species, followed by S. chinensis, Keywords: Shibataea while the rest of Shibataea can be further divided into two clades. However, the plastid and nuclear fl fi ddRAD-seq topologies con ict signi cantly. By comparing the results of network analysis and topologies recon- Genome skimming structed from different datasets, we identify S. kumasasa as the most admixed species, which may be Phylogeny caused by incomplete lineage sorting (ILS) or interspecific gene flow with four sympatric species. -
High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)
High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae) Yun-Jie Zhang1,2,3., Peng-Fei Ma1,2,3., De-Zhu Li1,2* 1 Key Laboratory of Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, People’s Republic of China, 2 Plant Germplasm and Genomics Center, Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, Yunnan, People’s Republic of China, 3 Graduate University of Chinese Academy of Sciences, Beijing, People’s Republic of China Abstract Background: Bambusoideae is the only subfamily that contains woody members in the grass family, Poaceae. In phylogenetic analyses, Bambusoideae, Pooideae and Ehrhartoideae formed the BEP clade, yet the internal relationships of this clade are controversial. The distinctive life history (infrequent flowering and predominance of asexual reproduction) of woody bamboos makes them an interesting but taxonomically difficult group. Phylogenetic analyses based on large DNA fragments could only provide a moderate resolution of woody bamboo relationships, although a robust phylogenetic tree is needed to elucidate their evolutionary history. Phylogenomics is an alternative choice for resolving difficult phylogenies. Methodology/Principal Findings: Here we present the complete nucleotide sequences of six woody bamboo chloroplast (cp) genomes using Illumina sequencing. These genomes are similar to those of other grasses and rather conservative in evolution. We constructed a phylogeny of Poaceae from 24 complete cp genomes including 21 grass species. Within the BEP clade, we found strong support for a sister relationship between Bambusoideae and Pooideae. In a substantial improvement over prior studies, all six nodes within Bambusoideae were supported with $0.95 posterior probability from Bayesian inference and 5/6 nodes resolved with 100% bootstrap support in maximum parsimony and maximum likelihood analyses. -
Theories of Ascent of Sap
Theories of Ascent of Sap The following points highlight the top four theories of ascent of sap. The theories are: 1. Vital Force Theory 2. Root Pressure Theory 3. Theory of Capillarity 4. Cohesion Tension Theory. 1. Vital Force Theory: A common vital force theory about the ascent of sap was put forward by J.C. Bose (1923). It is called pulsation theory. The theory believes that the innermost cortical cells of the root absorb water from the outer side and pump the same into xylem channels. However, living cells do not seem to be involved in the ascent of sap as water continues to rise upward in the plant in which roots have been cut or the living cells of the stem are killed by poison and heat. 2. Root Pressure Theory: The theory was put forward by Priestley (1916). Root pressure is a positive pressure that develops in the xylem sap of the root of some plants. It is a manifestation of active water absorption. Root pressure is observed in certain seasons which favour optimum metabolic activity and reduce transpiration. It is maximum during rainy season in the tropical countries and during spring in temperate habitats. The amount of root pressure commonly met in plants is 1-2 bars or atmospheres. Higher values (e.g., 5-10 atm) are also observed occasionally. Root pressure is retarded or becomes absent under conditions of starvation, low temperature, drought and reduced availability of oxygen. There are three view points about the mechanism of root pressure development: (a) Osmotic: Tracheary elements of xylem accumulate salts and sugars. -
Identification and Characterization of the PEBP Family Genes in Moso
www.nature.com/scientificreports OPEN Identifcation and Characterization of the PEBP Family Genes in Moso Bamboo (Phyllostachys heterocycla) Zhaohe Yang1,2, Lei Chen1,2, Markus V. Kohnen2, Bei Xiong2,3, Xi Zhen2,3, Jiakai Liao2,3, Yoshito Oka2, Qiang Zhu2, Lianfeng Gu2, Chentao Lin 2,4* & Bobin Liu1,2* Moso bamboo is one of the economically most important plants in China. Moso bamboo is a monocarpic perennial that exhibits poor and slow germination. Thus, the fowering often causes destruction of moso bamboo forestry. However, how control of fowering and seed germination are regulated in moso bamboo is largely unclear. In this study, we identifed 5 members (PhFT1-5) of the phosphatidyl ethanolamine-binding proteins (PEBP) family from moso bamboo genome that regulate fowering, fower architecture and germination, and characterized the function of these PEBP family genes further in Arabidopsis. Phylogenetic analysis revealed that 3 (PhFT1, PhFT2 and PhFT3), 1 (PhFT4) and 1 (PhFT5) members belong to the TFL1-like clade, FT-like clade, and MFT-like clade, respectively. These PEBP family genes possess all structure necessary for PEBP gene function. The ectopic overexpression of PhFT4 and PhFT5 promotes fowering time in Arabidopsis, and that of PhFT1, PhFT2 and PhFT3 suppresses it. In addition, the overexpression of PhFT5 promotes seed germination rate. Interestingly, the overexpression of PhFT1 suppressed seed germination rate in Arabidopsis. The expression of PhFT1 and PhFT5 is signifcantly higher in seed than in tissues including leaf and shoot apical meristem, implying their function in seed germination. Taken together, our results suggested that the PEBP family genes play important roles as regulators of fowering and seed germination in moso bamboo and thereby are necessary for the sustainability of moso bamboo forest. -
Plant Water Relations: Absorption, Transport and Control Mechanisms
5 Plant Water Relations: Absorption, Transport and Control Mechanisms Geraldo Chavarria1 and Henrique Pessoa dos Santos2 1The University of Passo Fundo 2Embrapa Grape & Wine Brazil 1. Introduction Although water is abundant on Earth - covering 71% of the total surface - its distribution is not uniform and can easily cause restrictions in availability to vegetal production. At global scale, these restrictions are easily observed in dry climates and can appear in other regions which do not currently experience drought, as provided by the future backdrop of climate change (IPCC, 2007). The influences of water restriction on losses in the production and distribution of vegetation on the terrestrial surface are significantly larger than all other losses combined which are caused by biotic and abiotic factors (Boyer, 1985). This striking effect of water on plants emerges from its physiological importance, being an essential factor for successful plant growth, involving photosynthesis and several other biochemical processes such as the synthesis of energetic composites and new tissue. Therefore, in order to characterise the growth and productive behaviour of plant species it is essential to have an understanding of plant water relations, as well as the consequences of an inadequate water supply. Broadly, the water state of a plant is controlled by relative rates of loss and absorption, moreover it depends on the ability to adjust and keep an adequate water status. This will be considered throughout this chapter. 2. Absorption and water flow through plants Independent of the species, plants require from the soil a water volume that overcomes its metabolic necessities. Through the transpiration process plants transmit to the atmosphere the majority of the water absorbed from soil (generally around 90%). -
Anatomy of Leaf Apical Hydathodes in Four Monocotyledon Plants of Economic and Academic Relevance Alain Jauneau, Aude Cerutti, Marie-Christine Auriac, Laurent D
Anatomy of leaf apical hydathodes in four monocotyledon plants of economic and academic relevance Alain Jauneau, Aude Cerutti, Marie-Christine Auriac, Laurent D. Noël To cite this version: Alain Jauneau, Aude Cerutti, Marie-Christine Auriac, Laurent D. Noël. Anatomy of leaf apical hydathodes in four monocotyledon plants of economic and academic relevance. PLoS ONE, Public Library of Science, 2020, 15 (9), pp.e0232566. 10.1371/journal.pone.0232566. hal-02972304 HAL Id: hal-02972304 https://hal.inrae.fr/hal-02972304 Submitted on 20 Oct 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution| 4.0 International License PLOS ONE RESEARCH ARTICLE Anatomy of leaf apical hydathodes in four monocotyledon plants of economic and academic relevance 1☯ 2☯ 1,2 2 Alain Jauneau *, Aude Cerutti , Marie-Christine Auriac , Laurent D. NoeÈlID * 1 FeÂdeÂration de Recherche 3450, Universite de Toulouse, CNRS, Universite Paul Sabatier, Castanet- Tolosan, France, 2 LIPM, Universite de Toulouse, INRAE, CNRS, Universite Paul Sabatier, Castanet- Tolosan, France ☯ These authors contributed equally to this work. a1111111111 * [email protected] (AJ); [email protected] (LN) a1111111111 a1111111111 a1111111111 a1111111111 Abstract Hydathode is a plant organ responsible for guttation in vascular plants, i.e. -
Non-Destructive Estimation of Root Pressure Using Sap Flow, Stem
Annals of Botany 111: 271–282, 2013 doi:10.1093/aob/mcs249, available online at www.aob.oxfordjournals.org Non-destructive estimation of root pressure using sap flow, stem diameter measurements and mechanistic modelling Tom De Swaef*, Jochen Hanssens, Annelies Cornelis and Kathy Steppe Faculty of Bioscience Engineering, Department of Applied Ecology and Environmental Biology, Laboratory of Plant Ecology, Ghent University, Coupure links 653, B-9000 Ghent, Belgium * For correspondence. E-mail [email protected] Received: 20 August 2012 Returned for revision: 24 September 2012 Accepted: 8 October 2012 Published electronically: 4 December 2012 † Background Upward water movement in plants via the xylem is generally attributed to the cohesion–tension theory, as a response to transpiration. Under certain environmental conditions, root pressure can also contribute Downloaded from to upward xylem water flow. Although the occurrence of root pressure is widely recognized, ambiguity exists about the exact mechanism behind root pressure, the main influencing factors and the consequences of root pres- sure. In horticultural crops, such as tomato (Solanum lycopersicum), root pressure is thought to cause cells to burst, and to have an important impact on the marketable yield. Despite the challenges of root pressure research, progress in this area is limited, probably because of difficulties with direct measurement of root pressure, prompt- ing the need for indirect and non-destructive measurement techniques. http://aob.oxfordjournals.org/ † Methods A new approach to allow non-destructive and non-invasive estimation of root pressure is presented, using continuous measurements of sap flow and stem diameter variation in tomato combined with a mechanistic flow and storage model, based on cohesion–tension principles. -
The Good Luck Or Fortune-Inviting Bamboo, Shibataea Kumasaca
The Good Luck or Fortune-inviting Bamboo Shibataea kumasaca (Steud.) Makino ex Nakai: A discussion of the correct botanical name Chris Stapleton Introduction The article by Karl Bareis in UK Bamboo Society Newsletter No 26 led me to look at the spelling of the species name for this lovely bamboo, and to find out why the local name for Sasa veitchii became tied up in it. I concluded that the Bad Luck Bamboo would be a better name for it, for anyone trying to get the name right. Both spellings kumasasa and kumasaca appear in the literature, and the authorities given for the generic and species names also vary widely. This is a charming dwarf bamboo with rounded leaves, having the appearance of a miniature short-branched Phyllostachys. As an architectural plant it is very useful, spreading slowly into dense low domes that can be clipped to maintain their size. Okamura et al. (1991), in their guide to horticultural bamboos in Japan, report that it is essential for the Yebisu religious festival. Karl has now kindly filled in more details of its history for us. It certainly warrants wider planting, both for its attractive appearance, and for its strong Japanese cultural associations. When it was first referred to in lists of plants grown in Dutch colonies of the East Indies, now Java, nearly all bamboos were still placed in the genus Bambusa. Munro seems to have been the first to realise that such a placement was unsatisfactory, and he transferred it into Phyllostachys (1868). Makino later decided that it deserved a new genus of its own, and he coined the name Shibataea, dedicating it to the Japanese botanist Dr Keitaro Shibata, in recognition of his contributions to the study of Japanese bamboos. -
3115 SAPS Operating Instructions
OPERATING INSTRUCTIONS FIELD PLANT WATER STATUS CONSOLE March 2017 Fig. 1 - Model 3115 Portable Plant Water Console shown with 22 c/f Compressed Gas Cylinder, 3072V22 SOILMOISTURE EQUIPMENT CORP. P.O. Box 30025, Santa Barbara, CA 93105 U.S.A. Telephone 805-964-3525 - Fax No. 805-683-2189 Email: [email protected] - Website: http://www.soilmoisture.com Table of Contents Chapter - Page 1 Description ............................................................................................................................... 1 - 4 2 Technical Specification ............................................................................................................ 2 - 5 2.1 Weight .......................................................................................................................... 2 - 5 2.2 Dimensions ................................................................................................................... 2 - 5 2.3 Pressure Vessel ............................................................................................................. 2 - 5 2.4 Gauges .......................................................................................................................... 2 - 5 2.5 Valves ........................................................................................................................... 2 - 5 2.6 Connecting Hose .......................................................................................................... 2 - 5 2.7 Pressure Tank .............................................................................................................. -
Ornamental Grasses for the Midsouth Landscape
Ornamental Grasses for the Midsouth Landscape Ornamental grasses with their variety of form, may seem similar, grasses vary greatly, ranging from cool color, texture, and size add diversity and dimension to season to warm season grasses, from woody to herbaceous, a landscape. Not many other groups of plants can boast and from annuals to long-lived perennials. attractiveness during practically all seasons. The only time This variation has resulted in five recognized they could be considered not to contribute to the beauty of subfamilies within Poaceae. They are Arundinoideae, the landscape is the few weeks in the early spring between a unique mix of woody and herbaceous grass species; cutting back the old growth of the warm-season grasses Bambusoideae, the bamboos; Chloridoideae, warm- until the sprouting of new growth. From their emergence season herbaceous grasses; Panicoideae, also warm-season in the spring through winter, warm-season ornamental herbaceous grasses; and Pooideae, a cool-season subfamily. grasses add drama, grace, and motion to the landscape Their habitats also vary. Grasses are found across the unlike any other plants. globe, including in Antarctica. They have a strong presence One of the unique and desirable contributions in prairies, like those in the Great Plains, and savannas, like ornamental grasses make to the landscape is their sound. those in southern Africa. It is important to recognize these Anyone who has ever been in a pine forest on a windy day natural characteristics when using grasses for ornament, is aware of the ethereal music of wind against pine foliage. since they determine adaptability and management within The effect varies with the strength of the wind and the a landscape or region, as well as invasive potential. -
Differences Between Transpiration and Guttation
BIOLOGY TRANSPIRATION Significance and Factors affecting Transpiration Factors Affecting the Rate of Transpiration •On a bright sunny day, stomata open fully, so transpiration is increased. •On a cloudy day, stomata open partially, so Intensity of sunlight transpiration is reduced. •At night, stomata close; hence, transpiration is greatly reduced or negligible. •Increase in temperature of the air increases the rate Temperature of transpiration. •Transpiration increases with rapid or active air Velocity of wind movement. Humidity •If the air is humid, the rate of transpiration is reduced. •Increase in the CO2 level in the atmosphere over Carbon dioxide normal 0.03% causes stomatal closure. Hence, it decreases the rate of transpiration. •With decrease in atmospheric pressure, the rate of Atmospheric pressure transpiration increases. www.topperlearning.com 2 BIOLOGY TRANSPIRATION Adaptation in Plants to Control Excessive Transpiration Plants which grow in dry climate have evolved a variety of adaptations to curtail transpiration. Morphological Leaves may be modified into spines as in cactus or into needles as in pines. Adaptations Spines Needles Leaves may be folded or rolled up. Rolled up Leaves Leaves may be shed. Example: deciduous trees. Deciduous Trees Anatomical The number of stomata is reduced, and they may be sunken in pits. Adaptations Sunken Stoma www.topperlearning.com 3 BIOLOGY TRANSPIRATION Structure of Sunken Stomata A thick waxy cuticle develops on the leaves. Example: Banyan tree, evergreen trees. Banyan Tree Shrubs and grass develop a waterproof covering of cork or bark. A multiple epidermis may develop in some leaves. www.topperlearning.com 4 BIOLOGY TRANSPIRATION Significance of Transpiration Cooling Effect Suction Force Distribution of Water and Mineral Salts Evaporation reduces the As water evaporates from leaves, Higher the rate of transpiration, temperature of leaf a suction force is created. -
Large Trees, Supertrees and the Grass Phylogeny
LARGE TREES, SUPERTREES AND THE GRASS PHYLOGENY Thesis submitted to the University of Dublin, Trinity College for the Degree of Doctor of Philosophy (Ph.D.) by Nicolas Salamin Department of Botany University of Dublin, Trinity College 2002 Research conducted under the supervision of Dr. Trevor R. Hodkinson Department of Botany, University of Dublin, Trinity College Dr. Vincent Savolainen Jodrell Laboratory, Molecular Systematics Section, Royal Botanic Gardens, Kew, London DECLARATION I thereby certify that this thesis has not been submitted as an exercise for a degree at any other University. This thesis contains research based on my own work, except where otherwise stated. I grant full permission to the Library of Trinity College to lend or copy this thesis upon request. SIGNED: ACKNOWLEDGMENTS I wish to thank Trevor Hodkinson and Vincent Savolainen for all the encouragement they gave me during the last three years. They provided very useful advice on scientific papers, presentation lectures and all aspects of the supervision of this thesis. It has been a great experience to work in Ireland, and I am especially grateful to Trevor for the warm welcome and all the help he gave me, at work or outside work, since the beginning of this Ph.D. in the Botany Department. I will always remember his patience and kindness to me at this time. I am also grateful to Vincent for his help and warm welcome during the different periods of time I stayed in London, but especially for all he did for me since my B.Sc. at the University of Lausanne. I wish also to thank Prof.