Notes on the Paradox Frog, Pseudis Paradoxa, in Bolivia
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The Mitochondrial Genome of the Endemic Brazilian Paradoxial Frog Pseudis Tocantins (Hylidae)
University of Kentucky UKnowledge Biology Faculty Publications Biology 10-26-2018 The itM ochondrial Genome of the Endemic Brazilian Paradoxial Frog Pseudis tocantins (Hylidae) Kaleb Pretto Gatto University of Campinas, Brazil Jeramiah J. Smith University of Kentucky, [email protected] Luciana Bolsoni Lourenço University of Campinas, Brazil Right click to open a feedback form in a new tab to let us know how this document benefits oy u. Follow this and additional works at: https://uknowledge.uky.edu/biology_facpub Part of the Biology Commons, and the Genetics and Genomics Commons Repository Citation Gatto, Kaleb Pretto; Smith, Jeramiah J.; and Lourenço, Luciana Bolsoni, "The itM ochondrial Genome of the Endemic Brazilian Paradoxial Frog Pseudis tocantins (Hylidae)" (2018). Biology Faculty Publications. 160. https://uknowledge.uky.edu/biology_facpub/160 This Article is brought to you for free and open access by the Biology at UKnowledge. It has been accepted for inclusion in Biology Faculty Publications by an authorized administrator of UKnowledge. For more information, please contact [email protected]. The Mitochondrial Genome of the Endemic Brazilian Paradoxial Frog Pseudis tocantins (Hylidae) Notes/Citation Information Published in Mitochondrial DNA Part B, v. 3, no. 2, p. 1106-1107. © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Digital Object Identifier (DOI) https://doi.org/10.1080/23802359.2018.1508385 This article is available at UKnowledge: https://uknowledge.uky.edu/biology_facpub/160 Mitochondrial DNA Part B Resources ISSN: (Print) 2380-2359 (Online) Journal homepage: https://www.tandfonline.com/loi/tmdn20 The mitochondrial genome of the endemic Brazilian paradoxical frog Pseudis tocantins (Hylidae) Kaleb Pretto Gatto, Jeramiah J. -
Histomorfología De La Glándula Tiroides Durante La Ontogenia En Pseudis Paradoxa (Anura, Hylidae)
Tesis Doctoral Histomorfología de la glándula tiroides durante la ontogenia en Pseudis paradoxa (Anura, Hylidae) Cruz, Julio César 2017 Este documento forma parte de las colecciones digitales de la Biblioteca Central Dr. Luis Federico Leloir, disponible en bibliotecadigital.exactas.uba.ar. Su utilización debe ser acompañada por la cita bibliográfica con reconocimiento de la fuente. This document is part of the digital collection of the Central Library Dr. Luis Federico Leloir, available in bibliotecadigital.exactas.uba.ar. It should be used accompanied by the corresponding citation acknowledging the source. Cita tipo APA: Cruz, Julio César. (2017). Histomorfología de la glándula tiroides durante la ontogenia en Pseudis paradoxa (Anura, Hylidae). Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. https://hdl.handle.net/20.500.12110/tesis_n6259_Cruz Cita tipo Chicago: Cruz, Julio César. "Histomorfología de la glándula tiroides durante la ontogenia en Pseudis paradoxa (Anura, Hylidae)". Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. 2017. https://hdl.handle.net/20.500.12110/tesis_n6259_Cruz Dirección: Biblioteca Central Dr. Luis F. Leloir, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. Contacto: bibliotecadigital.exactas.uba.ar Intendente Güiraldes 2160 - C1428EGA - Tel. (++54 +11) 4789-9293 UNIVERSIDAD DE BUENOS AIRES Facultad de Ciencias Exactas y Naturales Departamento de Biodiversidad y Biología Experimental Histomorfología de la glándula tiroides durante la ontogenia -
Anura: Hylidae)
Zootaxa 3904 (2): 270–282 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3904.2.6 http://zoobank.org/urn:lsid:zoobank.org:pub:F10BD470-6127-487B-B0E5-4B349A102EA1 The tadpole of Sphaenorhynchus caramaschii, with comments on larval morphology of Sphaenorhynchus (Anura: Hylidae) KATYUSCIA ARAUJO-VIEIRA1,6, ANDRE TACIOLI3, JULIAN FAIVOVICH1,2, VICTOR G. D. ORRICO4 & TARAN GRANT5 1División Herpetología, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”-CONICET, Ángel Gallardo 470, C1405DJ, Buenos Aires, Argentina. E-mail: [email protected] 2Departamento de Biodiversidad y Biología Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. E-mail: [email protected] 3Departamento de Biologia Animal, I.B., Universidade Estadual de Campinas, São Paulo, Brasil. Email: [email protected] 4Universidade Estadual de Santa Cruz, Departamento de Ciências Biológicas, Rodovia Jorge Amado, Km 16, 45662-900, Salobrinho, Ilhéus, Bahia, Brasil. E-mail: [email protected] 5Departamento de Zoologia, I.B.,Universidade de São Paulo, São Paulo, Brasil. E-mail: [email protected] 6Corresponding author Abstract We describe the tadpole of Sphaenorhynchus caramaschii. It differs from tadpoles of other species of Sphaenorhynchus in having a short spiracle, submarginal papillae, and alternating short and large marginal papillae in the oral disc. Some larval characteristics, like morphology and position of the nostrils, length of the spiracle, and size of the marginal papillae on the oral disc are discussed for tadpoles of other species of Sphaenorhynchus. Key words: Hylinae, Dendropsophini, Sphaenorhynchus, taxonomy, systematics Introduction The Neotropical hylid frog genus Sphaenorhynchus Tschudi includes small greenish treefrogs that inhabit temporary, permanent, or semi-permanent ponds in open areas where males vocalize while perched on the floating vegetation or partially submerged in the water (e.g. -
Ecological Functions of Neotropical Amphibians and Reptiles: a Review
Univ. Sci. 2015, Vol. 20 (2): 229-245 doi: 10.11144/Javeriana.SC20-2.efna Freely available on line REVIEW ARTICLE Ecological functions of neotropical amphibians and reptiles: a review Cortés-Gomez AM1, Ruiz-Agudelo CA2 , Valencia-Aguilar A3, Ladle RJ4 Abstract Amphibians and reptiles (herps) are the most abundant and diverse vertebrate taxa in tropical ecosystems. Nevertheless, little is known about their role in maintaining and regulating ecosystem functions and, by extension, their potential value for supporting ecosystem services. Here, we review research on the ecological functions of Neotropical herps, in different sources (the bibliographic databases, book chapters, etc.). A total of 167 Neotropical herpetology studies published over the last four decades (1970 to 2014) were reviewed, providing information on more than 100 species that contribute to at least five categories of ecological functions: i) nutrient cycling; ii) bioturbation; iii) pollination; iv) seed dispersal, and; v) energy flow through ecosystems. We emphasize the need to expand the knowledge about ecological functions in Neotropical ecosystems and the mechanisms behind these, through the study of functional traits and analysis of ecological processes. Many of these functions provide key ecosystem services, such as biological pest control, seed dispersal and water quality. By knowing and understanding the functions that perform the herps in ecosystems, management plans for cultural landscapes, restoration or recovery projects of landscapes that involve aquatic and terrestrial systems, development of comprehensive plans and detailed conservation of species and ecosystems may be structured in a more appropriate way. Besides information gaps identified in this review, this contribution explores these issues in terms of better understanding of key questions in the study of ecosystem services and biodiversity and, also, of how these services are generated. -
Pseudis Paradoxa
__all_short_notes_sHoRt_note.qxd 12.02.2016 10:37 seite 26 192 sHoRt note HeRPetoZoa 28 (3/4) Wien, 30. Jänner 2016 sHoRt note Pseudis paradoxa (Linnaeus , 1758 ): um body size (svL 45-75 mm), relatively northward extension of the known small head and protruding eyes in dorsolat - distribution range in Colombia eral position with a yellow iris crossed by a brown bar ( LesCuRe & M aRty 2000). its common name makes reference to the extra - in spite of increasing knowledge about ordinary size of the tadpole relative to that the diversity of anuran amphibians in Co - of adult individuals ( eMeRson 1988). the lombia ( BeRnaL & L ynCH 2008; GaLvis - distribution of this species covers Colom - PeñueLa et al. 2011; aCosta -G aLvis 2012), bia, Guyana, suriname, Brazil, Bolivia, there are still many gaps with regard to the Peru, venezuela and the islands of trinidad known distribution of the species. Detec- and tobago ( FRost 2014). in Colombia, it tion of the presence of anuran species in is present in the the lower Rio Magdalena places from which they were previously area (Departments of antioquia, atlántico, unrecorded establishes a baseline for the Bolivar, Cesar, Cordoba, Magdalena, study of species richness, optimizing con - santander, sucre) as well as the departments servation plans, and research in the fields of of arauca and Meta in the eastern region of taxonomy, systematics and natural history. Colombia (Fig. 1a) ( RenGiFo & L unDBeRG this is the first report on the occurrence of 1999; aCosta -G aLvis 2000; Cuentas - the hylid frog Pseudis paradoxa (Linnaeus , MontaLvo 2002; aCosta -G aLvis 2014). 1758 ) in the north Colombian department of the authors recorded several individu - Guajira (Fig. -
The International Journal of the Willi Hennig Society
Cladistics VOLUME 35 • NUMBER 5 • OCTOBER 2019 ISSN 0748-3007 Th e International Journal of the Willi Hennig Society wileyonlinelibrary.com/journal/cla Cladistics Cladistics 35 (2019) 469–486 10.1111/cla.12367 A total evidence analysis of the phylogeny of hatchet-faced treefrogs (Anura: Hylidae: Sphaenorhynchus) Katyuscia Araujo-Vieiraa, Boris L. Blottoa,b, Ulisses Caramaschic, Celio F. B. Haddadd, Julian Faivovicha,e,* and Taran Grantb,* aDivision Herpetologıa, Museo Argentino de Ciencias Naturales “Bernardino Rivadavia”-CONICET, Angel Gallardo 470, Buenos Aires, C1405DJR, Argentina; bDepartamento de Zoologia, Instituto de Biociencias,^ Universidade de Sao~ Paulo, Sao~ Paulo, Sao~ Paulo, 05508-090, Brazil; cDepartamento de Vertebrados, Museu Nacional, Universidade Federal do Rio de Janeiro, Quinta da Boa Vista, Sao~ Cristov ao,~ Rio de Janeiro, Rio de Janeiro, 20940-040, Brazil; dDepartamento de Zoologia and Centro de Aquicultura (CAUNESP), Instituto de Biociencias,^ Universidade Estadual Paulista, Avenida 24A, 1515, Bela Vista, Rio Claro, Sao~ Paulo, 13506–900, Brazil; eDepartamento de Biodiversidad y Biologıa Experimental, Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Buenos Aires, Argentina Accepted 14 November 2018 Abstract The Neotropical hylid genus Sphaenorhynchus includes 15 species of small, greenish treefrogs widespread in the Amazon and Orinoco basins, and in the Atlantic Forest of Brazil. Although some studies have addressed the phylogenetic relationships of the genus with other hylids using a few exemplar species, its internal relationships remain poorly understood. In order to test its monophyly and the relationships among its species, we performed a total evidence phylogenetic analysis of sequences of three mitochondrial and three nuclear genes, and 193 phenotypic characters from all species of Sphaenorhynchus. -
Curriculum Vitae JERAMIAH J. SMITH
Curriculum Vitae JERAMIAH J. SMITH CURRENT ADDRESS University of Kentucky Department of Biology Lexington, KY 40506 Telephone: (859) 948-3674 Fax: (859) 257-1717 E-mail: [email protected] EDUCATION University of Kentucky, Ph.D. in Biology, 2007 Colorado State University, M.S. in Biology, 2002 Black Hills State University, B.S. in Biology, cum laude, 1998 APPOINTMENTS Associate Professor, University of Kentucky, Department of Biology (2017 - Current) Assistant Professor, University of Kentucky, Department of Biology (2011 - 2017) Postdoctoral Fellow, University of Washington Department of Genome Sciences and Benaroya Research Institute at Virginia Mason (2007 - 2011) Research Assistant, University of Kentucky (2002 - 2007) Research Fellow, University of Kentucky (2002 - 2003, 2006 - 2007) Research Assistant, Colorado State University (1999 - 2002) Teaching Assistant, Colorado State University (1999 - 2001) Undergraduate Research Assistant, Black Hills State University (1996 - 1999) GRANTS AND FELLOWSHIPS ACTIVE NIH R35 08/01/18 - 07/31/23 $1,852,090 Functional Analysis of Programmed Genome Rearrangement Goals - The major goals of this project are dissecting the underlying molecular mechanisms of programmed genome rearrangement and the functions of eliminated genes. Role - PI: 3.57 calendar months of effort per year. NSF MCB - Smith (PI) 07/15/18 - 06/30/22 $900,000 Reconstructing the Biology of Ancestral Vertebrate Genomes Goals - The major goals of this project are to characterize the evolution of genome biology and structure, over deep vertebrate ancestry. Role - PI: 1.0 calendar months of effort per year. NIH R24 - Voss (PI) 04/01/12 - 06/30/20 $4,124,739* Research Resources for Model Amphibians Goals - The major goals of this project are to support research using the Ambystoma mexicanum by developing a genome assembly and epigenomic datasets. -
A Importância De Se Levar Em Conta a Lacuna Linneana No Planejamento De Conservação Dos Anfíbios No Brasil
UNIVERSIDADE FEDERAL DE GOIÁS INSTITUTO DE CIÊNCIAS BIOLÓGICAS PROGRAMA DE PÓS-GRADUAÇÃO EM ECOLOGIA E EVOLUÇÃO A IMPORTÂNCIA DE SE LEVAR EM CONTA A LACUNA LINNEANA NO PLANEJAMENTO DE CONSERVAÇÃO DOS ANFÍBIOS NO BRASIL MATEUS ATADEU MOREIRA Goiânia, Abril - 2015. TERMO DE CIÊNCIA E DE AUTORIZAÇÃO PARA DISPONIBILIZAR AS TESES E DISSERTAÇÕES ELETRÔNICAS (TEDE) NA BIBLIOTECA DIGITAL DA UFG Na qualidade de titular dos direitos de autor, autorizo a Universidade Federal de Goiás (UFG) a disponibilizar, gratuitamente, por meio da Biblioteca Digital de Teses e Dissertações (BDTD/UFG), sem ressarcimento dos direitos autorais, de acordo com a Lei nº 9610/98, o do- cumento conforme permissões assinaladas abaixo, para fins de leitura, impressão e/ou down- load, a título de divulgação da produção científica brasileira, a partir desta data. 1. Identificação do material bibliográfico: [x] Dissertação [ ] Tese 2. Identificação da Tese ou Dissertação Autor (a): Mateus Atadeu Moreira E-mail: ma- teus.atadeu@gm ail.com Seu e-mail pode ser disponibilizado na página? [x]Sim [ ] Não Vínculo empregatício do autor Bolsista Agência de fomento: CAPES Sigla: CAPES País: BRASIL UF: D CNPJ: 00889834/0001-08 F Título: A importância de se levar em conta a Lacuna Linneana no planejamento de conservação dos Anfíbios no Brasil Palavras-chave: Lacuna Linneana, Biodiversidade, Conservação, Anfíbios do Brasil, Priorização espacial Título em outra língua: The importance of taking into account the Linnean shortfall on Amphibian Conservation Planning Palavras-chave em outra língua: Linnean shortfall, Biodiversity, Conservation, Brazili- an Amphibians, Spatial Prioritization Área de concentração: Biologia da Conservação Data defesa: (dd/mm/aaaa) 28/04/2015 Programa de Pós-Graduação: Ecologia e Evolução Orientador (a): Daniel de Brito Cândido da Silva E-mail: [email protected] Co-orientador E-mail: *Necessita do CPF quando não constar no SisPG 3. -
Amphibian Conservation in the Caatinga Biome and Semiarid Region of Brazil
Herpetologica, 68(1), 2012, 31–47 E 2012 by The Herpetologists’ League, Inc. AMPHIBIAN CONSERVATION IN THE CAATINGA BIOME AND SEMIARID REGION OF BRAZIL 1,3 2 MILENA CAMARDELLI AND MARCELO F. NAPOLI 1Programa de Po´s-Graduac¸a˜o em Ecologia e Biomonitoramento, Instituto de Biologia, Universidade Federal da Bahia, Rua Bara˜o de Jeremoabo, Campus Universita´rio de Ondina, 40170-115 Salvador, Bahia, Brazil 2Museu de Zoologia, Departamento de Zoologia, Instituto de Biologia, Universidade Federal da Bahia, Rua Bara˜o de Jeremoabo, Campus Universita´rio de Ondina, 40170-115 Salvador, Bahia, Brazil ABSTRACT: The Brazilian Ministry of the Environment (Ministe´rio Do Meio Ambiente, MMA) proposed defining priority areas for Brazilian biodiversity conservation in 2007, but to date, no definitions of priority areas for amphibian conservation have been developed for the Caatinga biome or the semiarid region of Brazil. In this study, we searched for ‘‘hot spots’’ of amphibians in these two regions and assessed whether the priority areas established by the MMA coincided with those suitable for amphibian conservation. We determined amphibian hot spots by means of three estimates: areas of endemism, areas of high species richness, and areas with species that are threatened, rare, or have very limited distributions. We then assessed the degree of coincidence between amphibian hot spots and the priority areas of the MMA based on the current conservation units. We analyzed areas of endemism with the use of a parsimony analysis of endemicity (PAE) on quadrats. The Caatinga biome and semiarid region showed four and six areas of endemism, respectively, mainly associated with mountainous areas that are covered by isolated forests and positively correlated with species richness. -
3Systematics and Diversity of Extant Amphibians
Systematics and Diversity of 3 Extant Amphibians he three extant lissamphibian lineages (hereafter amples of classic systematics papers. We present widely referred to by the more common term amphibians) used common names of groups in addition to scientifi c Tare descendants of a common ancestor that lived names, noting also that herpetologists colloquially refer during (or soon after) the Late Carboniferous. Since the to most clades by their scientifi c name (e.g., ranids, am- three lineages diverged, each has evolved unique fea- bystomatids, typhlonectids). tures that defi ne the group; however, salamanders, frogs, A total of 7,303 species of amphibians are recognized and caecelians also share many traits that are evidence and new species—primarily tropical frogs and salaman- of their common ancestry. Two of the most defi nitive of ders—continue to be described. Frogs are far more di- these traits are: verse than salamanders and caecelians combined; more than 6,400 (~88%) of extant amphibian species are frogs, 1. Nearly all amphibians have complex life histories. almost 25% of which have been described in the past Most species undergo metamorphosis from an 15 years. Salamanders comprise more than 660 species, aquatic larva to a terrestrial adult, and even spe- and there are 200 species of caecilians. Amphibian diver- cies that lay terrestrial eggs require moist nest sity is not evenly distributed within families. For example, sites to prevent desiccation. Thus, regardless of more than 65% of extant salamanders are in the family the habitat of the adult, all species of amphibians Plethodontidae, and more than 50% of all frogs are in just are fundamentally tied to water. -
Phylogenetic Analyses of Rates of Body Size Evolution Should Show
SSStttooonnnyyy BBBrrrooooookkk UUUnnniiivvveeerrrsssiiitttyyy The official electronic file of this thesis or dissertation is maintained by the University Libraries on behalf of The Graduate School at Stony Brook University. ©©© AAAllllll RRRiiiggghhhtttsss RRReeessseeerrrvvveeeddd bbbyyy AAAuuuttthhhooorrr... The origins of diversity in frog communities: phylogeny, morphology, performance, and dispersal A Dissertation Presented by Daniel Steven Moen to The Graduate School in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Ecology and Evolution Stony Brook University August 2012 Stony Brook University The Graduate School Daniel Steven Moen We, the dissertation committee for the above candidate for the Doctor of Philosophy degree, hereby recommend acceptance of this dissertation. John J. Wiens – Dissertation Advisor Associate Professor, Ecology and Evolution Douglas J. Futuyma – Chairperson of Defense Distinguished Professor, Ecology and Evolution Stephan B. Munch – Ecology & Evolution Graduate Program Faculty Adjunct Associate Professor, Marine Sciences Research Center Duncan J. Irschick – Outside Committee Member Professor, Biology Department University of Massachusetts at Amherst This dissertation is accepted by the Graduate School Charles Taber Interim Dean of the Graduate School ii Abstract of the Dissertation The origins of diversity in frog communities: phylogeny, morphology, performance, and dispersal by Daniel Steven Moen Doctor of Philosophy in Ecology and Evolution Stony Brook University 2012 In this dissertation, I combine phylogenetics, comparative methods, and studies of morphology and ecological performance to understand the evolutionary and biogeographical factors that lead to the community structure we see today in frogs. In Chapter 1, I first summarize the conceptual background of the entire dissertation. In Chapter 2, I address the historical processes influencing body-size evolution in treefrogs by studying body-size diversification within Caribbean treefrogs (Hylidae: Osteopilus ). -
Predation on the Paradoxical Frog Pseudis Paradoxa (Anura, Hylidae, Pseudinae) by the Great Egret Ardea Alba (Aves, Pelecaniformes, Ardeidae)
Herpetology Notes, volume 13: 965-967 (2020) (published online on 26 November 2020) Predation on the paradoxical frog Pseudis paradoxa (Anura, Hylidae, Pseudinae) by the great egret Ardea alba (Aves, Pelecaniformes, Ardeidae) Aline Emanuele Oliveira-Souza1,*, Girlan Dias-Silva2, and Carlos Eduardo Costa-Campos1 Anurans represent an important food source for a Fieldwork was conducted at the Ecological Station of wide range of invertebrates (Toledo, 2005; Toledo Maracá-Jipioca (ESEC), located in the coast of Amapá et al., 2007) and vertebrates, including birds (Poulin State, eastern Amazon, Brazil. The ESEC comprises et al., 2001; Toledo et al., 2004; Lopes et al., 2005). the Maracá and Jipioca islands; Maracá is divided Because they tend to occur in association with aquatic into North and South islands, which are separated by a environments, anurans are more vulnerable to aquatic channel called Igarapé do Inferno. The terrain is flat and predators (Toledo, 2003). In a review of records of composed by floodplains, mangroves, bamboo forest and vertebrate predators of anurans, Aves was the third most small areas of terra firme forest (França et al., 2018). On representative group, comprising approximately 20% of 11 October 2017 at 07:56 h, a camera-trapping, installed published reports (Toledo et al., 2007). Herein we report for the monitoring of jaguars, recorded an individual of on a predation event on an individual of the paradoxical A. alba preying upon an individual of P. paradoxa on frog Pseudis paradoxa (Linnaeus, 1758) by the great the margin of a pond in Bibi Lake (GPS coordinates egret Ardea alba (Linnaeus, 1758), in a coastal island = 2.1448°N; 50.5248°W), located at Maracá North of northern Brazil.