Hemoglobin and Myoglobin As Reducing Agents in Biological Systems
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Strategies for Increasing Oxidative Stability of (Fresh) Meat Color
O X I D A T I V E P R O C E S S E S I N M E A T Strategies for Increasing Oxidative Stability of (Fresh) Meat Color CAMERON FAUSTMAN*, W.K.M. CHAN, M.P. LYNCH and S.T. JOO Introduction moglobin and myoglobin) and for electron transport during respiration (cytochromes) in the living animal. Skeletal Fresh meat color is determined by the oxidation status muscles which obtain energy primarily by aerobic means of myoglobin. Several reviews of myoglobin chemistry and contain relatively high concentrations of heme proteins when meat color stability, including cured and/or cooked meat compared to those which depend primarily on anaerobic color, have been published (Livingston and Brown, 1981; glycolysis. Giddings, 1977; Faustman and Cassens, 1990a; Renerre, Of the heme proteins found in post-mortem skeletal 1990; Cornforth, 1994). The purpose of this presentation is muscle, myoglobin is the most important for considerations to emphasize recent research findings which impact the oxi- of meat color. The majority of hemoglobin found in the liv- dative stability of myoglobin in fresh meat. Specific atten- ing animal is lost during slaughter as a result of exsan- tion is given to metmyoglobin reduction and antioxidant ap- guination. Some blood is retained in meat (Fleming et al., proaches for minimizing oxymyoglobin oxidation. 1960) and Warriss and Rhodes (1977) estimated the aver- Maintenance of oxymyoglobin and thus a desirable age residual blood content of butcher’s meat to be 0.3%. appearance in fresh meat has significant economic impact. Han et al. (1994) recently published a procedure for deter- Liu et al. -
Relationship Between Beef Colour and Myoglobin
Relationship between beef colour and myoglobin Author: S.H.J.M . Dobbelstein Registration number: 790608185120 Subject code: P052-754 (24 stp) P052-274 (1 stp) Supervisors: Dr. Ir. E.U. Thoden van Velzen (A&F) Dr. Ir.J.P.H . Linssen (WUR) Examiner: Prof. Dr. Ir. M.A.J.S. van Boekel Report 474 Preface This thesis is part of my Master in Food Technology at Wageningen UR. This subject was carried out at the Quality in Chains department of Agrotechnology & Food Innovations (A&F) in co opération with the Product Design and Quality Management Group of Wageningen UR. I worked on this thesis from January till August 2005 at A&F. During my study I became interested in Meat Science and the subject of this thesis fits perfecdy to my interests. During my stay at A&F I had all freedom and responsibility to conduct my research. This made I really enjoyed working on this thesis. Moreover, it increased my knowledge of Meat Science very much. I would like to thank Ulphard Thoden van Velzen, my supervisor at A&F, and Jozef Linssen, my supervisor at the University, for their help during this study. I also want to thank Ronald Holtmaat from ProMessa (Deventer, NL) who kindly provided the meat for this study. Furthermore I would like to thank Aart Zegveld, Dianne Somhorst and Janny Slotboom who helped me with my practical work at A&F. ©Agrotechnology &Foo d Innovations B.V .Membe r of Wageningen UR Abstract The most important quality attribute of fresh beef is its colour. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Myoglobin from Equine Skeletal Muscle
Myoglobin from equine skeletal muscle Catalog Number M0630 Storage Temperature –20 C CAS RN 100684-32-0 Precautions and Disclaimer This product is for R&D use only, not for drug, Product Description household, or other uses. Please consult the Safety Molecular mass:1 17.6 kDa Data Sheet for information regarding hazards and safe Extinction coefficient:2 EmM = 12.92 (555 nm) handling practices. pI:3 7.3 (major component) and 6.8 (minor component) Preparation Instructions Myoglobin from horse skeletal muscle is a single chain This protein is soluble in water (10 mg/ml), yielding a heme protein containing 153 amino acid residues. It clear, red brown solution. posesses no disulfide bridges or free -SH groups. Myoglobin contains 8 variously sized right-handed References helical regions, joined by non-ordered or random coil 1. Darbre, P.D. et al., Comparison of the myoglobin of regions. These 8 helices (A, B, C, D, E, F, G, and H) the zebra (Equus burchelli) with that of the horse are folded back on top of one another, and the heme is (Equus cabalus). Biochim. Biophys. Acta, 393(1), situated between helices E and F. The heme is almost 201-204 (1975). totally buried. Only the edge carrying the two 2. Bowen, W.J., The absorption spectra and extinction hydrophylic propionic acid groups is exposed. The coefficients of myoglobin. J. Biol. Chem., 179, 235- heme is held in position by a coordinating complex 245 (1949). between the central Fe(II) atom and 2 histidine residues 3. Radola, B.J., Isoelectric focusing in layers of (on helices E and F, respectively). -
And Detoxification (Benzola]Pyrene Quinones/Oxygen Radicals/NADPH-Cytochrome P-450 Reductase) PAUL L
Proc. Nati. Acad. Sci. USA Vol. 81, pp. 1696-1700, March 1984 Biochemistry Mutagenicity of quinones: Pathways of metabolic activation and detoxification (benzola]pyrene quinones/oxygen radicals/NADPH-cytochrome P-450 reductase) PAUL L. CHESIS*, DAVID E. LEVIN*, MARTYN T. SMITHt, LARS ERNSTERt, AND BRUCE N. AMES* Departments of *Biochemistry and tBiomedical and Environmental Health Sciences, School of Public Health, University of California, Berkeley, CA 94720; and tDepartment of Biochemistry, Arrhenius Laboratory, University of Stockholm, S-10691 Stockholm, Sweden Contributed by Bruce N. Ames, December 12, 1983 ABSTRACT The mutagenicity of various quinones, a class nones might also be mutagenic, and we have tested this pos- of compounds widely distributed in nature, is demonstrated in sibility using the TA104 strain, which is sensitive to a wide the Salmonella TA104 tester strain. The metabolic pathways variety of oxidative mutagens (17). We have also attempted by which four quinones, menadione, benzo[alpyrene 3,6-qui- to characterize the pathways by which several different qui- none, 9,10-phenanthrenequinone, and danthron, caused mu- nones are metabolized and to study the potential mutagenic- tagenicity in this test system were investigated in detail as were ity of the metabolites and side products formed. We there- the detoxification pathways. The two-electron reduction of fore decided to investigate only those quinones that required these quinones by NAD(P)H-quinone oxidoreductase (DT-di- metabolic activation to exhibit mutagenicity. To limit the aphorase) was not mutagenic, whereas the one-electron reduc- scope of this project we also chose not to study quinones tion, catalyzed by NADPH-cytochrome P-450 reductase, was that possess reactive leaving groups. -
1 Hemoglobin Catalyzes ATP-Synthesis in Human
Hemoglobin catalyzes ATP-synthesis in human erythrocytes: A murburn model Abhinav Parashar*, Vivian David Jacob, Daniel Andrew Gideon, Kelath Murali Manoj* *Corresponding authors, Satyamjayatu: The Science & Ethics Foundation, Snehatheeram, Kulappully, Shoranur-2, Kerala, India-679122. [email protected] Abstract: Blood hemoglobin (Hb) is the most abundant globular protein in humans, known to transport oxygen. Erythrocytes have ~10-3 M concentration levels of ATP in steady-state and we estimate that this high cannot be formed from 10-4 - 10-7 M levels of precursors via substrate- level phosphorylation of glycolysis. To account for this discrepancy, we propose that Hb serves as a ‘murzyme’ (a redox enzyme working along the principles of murburn concept), catalyzing the synthesis of the major amounts of ATP found in erythrocytes. This proposal is along the lines of our earlier works demonstrating DROS (diffusible reactive oxygen species) mediated ATP- synthesis as a thermodynamically and kinetically viable mechanism for physiological oxidative phosphorylation. We support the new hypothesis for Hb with theoretical arguments, experimental findings of reputed peers and in silico explorations. Using in silico methods, we demonstrate that adenoside nucleotide and 2,3-bisphosphoglycerate (2,3-BPG) binding sites are located suitably on the monomer/tetramer, thereby availing facile access to the superoxide emanating from the heme center. Our proposal explains earlier reported in situ experimental findings/suggestions of 2,3-BPG and ADP binding at the same locus on Hb. The binding energy is in the order of 2,3-BPG > NADH > ATP > ADP > AMP and agrees with earlier reports, potentially explaining the bioenergetic physiology of erythrocytes. -
As Well As Whale Metmyoglobin in 0.1 M Deuterated Phosphate at Pd 7 and at 31'C
NUCLEAR MAGNETIC RESONANCE STUDIES OF HEMOGLOBINS, III. EVIDENCE 1OR THE NONEQUIVALENCE OF a- AND (3-CHAINS IN AZIDE DERIVATIVES OF AME'TIIEMOGLOBINS* BY DONALD G. DAVIS, SAMUEL CHARACIHEt AND) CHIEN Ho DEPARTMENT OF BIOPHYSICS AND MICRtOBIOLOGY, UNJVI;RSI'IY' OlF Pl-ITT'SlBURGH, PITTSBURGH, PENNSYLVANIA Communicated by George Scatchard, June 12, 1969 Abstract.-Nuclear magnetic resonance spectroscopy (100-MN1Hz proton) was used to study the low-spin (S = 1/2) azide derivatives of human adult (a2(32), human fetal (C2Y2), Zurich (a2,f263 HiS - Arg), and horse (a2'(32') methemoglobins, as well as whale metmyoglobin in 0.1 M deuterated phosphate at pD 7 and at 31'C. The experimental results indicate that the azide-bound heme groups of the a- and (-chains in human adult methemoglobin and of the a- and 'y-chains in fetal methemoglobin are not equivalent. The affinity of the (3- or e-chain for azide ion appears larger than that of the a-chain. The nuclar magnetic resonance spectrum of hemoglobin Zfirich shows that the environment of the azide-heme complex in the abnormal (-chain is altered by the substitution of arginine for histidine in the (3-63 position, while the a-heme environment remains unaffected. Introduction.-The chief physiologic function of hemoglobin is to transport molecular oxygen from lung to tissues by virtue of its ability to combine revers- ibly with oxygen. Hemoglobin is a protein molecule consisting of four subunits (normally two a-chains and two (3-chains). Each of the four subunits has a heme group, and these heme groups are the "active centers" of hemoglobin. -
Expression in Escherichia Coli of Cytochrome C Reductase Activity from a Maize NADH:Nitrate Reductase Complementary DNA'
Plant Physiol. (1992) 99, 693-699 Received for publication September 20, 1991 0032-0889/92/99/0693/07/$01 .00/0 Accepted December 11, 1991 Expression in Escherichia coli of Cytochrome c Reductase Activity from a Maize NADH:Nitrate Reductase Complementary DNA' Wilbur H. Campbell Phytotechnology Research Center and Department of Biological Sciences, Michigan Technological University, Houghton, Michigan 49931-1295 ABSTRACT the deduced amino acid sequences of NR to related mam- A cDNA clone was isolated from a maize (Zea mays L. cv malian protein sequences because of its similarity to the Mo- W64AxW183E) scutellum Xgtl 1 library using maize leaf pterin domain of sulfite oxidase, and the C-terminal region NADH:nitrate reductase Zmnrl cDNA clone as a hybridization of NR has sequence homology to NADH:Cyt b5 reductase, probe; it was designated Zmnr1S. ZmnrlS was shown to be an which is a FAD-containing enzyme (3, 22). In between the NADH:nitrate reductase clone by nucleotide sequencing and com- Mo-pterin and FAD domains, NR has similarity to mam- parison of its deduced amino acid sequence to Zmnrl. Zmnr1S, malian Cyt b5. This central Cyt b domain of NR is bridged to which is 1.8 kilobases in length and contains the code for both the other two domains on either side of it by highly variable the cytochrome b and flavin adenine dinucleotide domains of sequence regions that appear to be hinges (3). These hinge nitrate reductase, was cloned into the EcoRI site of the Esche- regions are probably exposed in native NR and susceptible to richia coli expression vector pET5b and expressed. -
Cytochrome C, Cytochrome B5 and Electron Transfer
Cytochrome c, cytochrome b5: electron transfer and new functions 1 Iron Protoporphyrin IX, heme b Heme a Prosthetic group Heme a is a form of heme found A flat and planar structure. In cytochromes a and a3. -. Itself Toxic O2 , H2O2 are formed. Insoluble 2 Covalent bonds Cytochrome c is a major player in membrane associated electron transport systems in bacteria and mitochondria. 3 Myoglobin, Hemoglobin His E7 Distal side Heme iron His F8 Proximal side Myoglobin has a strong affinity for oxygen Heme is located in the hydrophobic site. when it is in the lungs, and where the pressure is around 100 torr. When it reaches Heme Fe interacts with His. the tissues, where it's around 20 torr, the Coordination bond affinity for oxygen is still quite high. This makes myoglobin less efficient of an oxygen Propionates of heme interact with Arg. transporter than hemoglobin, which loses it's Ionic bond affinity for oxygen as the pressure goes down and releases the oxygen into the tissues. Heme is easily dissociated from the protein. Myoglobin's strong affinity for oxygen means that it keeps the oxygen binded to itself His (E7) is the oxygen binding site. instead of releasing it into the tissues. 4 Sickle cell anemia & malaria resistance In sickle cell hemoglobin (HbS) glutamic acid in position 6 (in beta chain) is mutated to valine. This change allows the deoxygenated form of the hemoglobin to stick to itself. 5 Figure 1. HO-1 Protects against Severe Malaria Using a mouse model for cerebral malaria, Ferreira et al. (2011) suggest a biochemical basis for the link between sickle cell disease and severe malaria. -
AMSA Meat Color Measurement Guidelines
AMSA Meat Color Measurement Guidelines Revised December 2012 American Meat Science Association http://www.meatscience.org AMSA Meat Color Measurement Guidelines Revised December 2012 American Meat Science Association 201 West Springfield Avenue, Suite 1202 Champaign, Illinois USA 61820 800-517-2672 [email protected] http://www.meatscience.org CONTENTS Technical Writing Committee .................................................................................................................... v Preface ..............................................................................................................................................................vi Section I: Introduction ................................................................................................................................. 1 Section II: Myoglobin Chemistry ............................................................................................................... 3 A. Fundamental Myoglobin Chemistry ................................................................................................................ 3 B. Dynamics of Myoglobin Redox Form Interconversions ........................................................................... 3 C. Visual, Practical Meat Color Versus Actual Pigment Chemistry ........................................................... 5 D. Factors Affecting Meat Color ............................................................................................................................... 6 E. Muscle -
Supplementary Material
Supplementary material: Figure S1. Protein-Protein Interactions of the 127 Dysregulated proteins in brain tissues following IONP exposure. The graph was generated from STRING database. 125 nodes, 183 edges, 2.93 Average node degree, 0.411 Avg. local clustering coefficient, 122 Expected number of edges, PPI enrichment p-value 1.83e-07. 1 Figure S2. Protein-Protein Interactions of the 66 Dysregulated proteins in liver tissues following IONP exposure. The graph was generated from STRING database. 61 nodes, 103 edges, 3.38 Average node degree, 0.412 Avg. local clustering coefficient, 22 Expected number of edges, PPI enrichment p-value < 1.0e-16. 2 Figure S3. Protein-Protein Interactions of the 84 Dysregulated proteins in lung tissues following IONP exposure. The graph was generated from STRING database. 82 nodes, 125 edges, 3.05 Average node degree, 0.422 Avg. local clustering coefficient, 64 Expected number of edges, PPI enrichment p-value 1.07e-11. 3 Table S1. List of all dysregulated proteins in brain tissues following IONP exposure. A) Down regulated proteins and B) Upregulated proteins. Statistically significant iTRAQ ratios (p-value ratio and p-value sample≤0.05) for the 127 proteins that are dysregulated. A) Sequence Peptide Spectral P-Value P-Value Log 10 Accession Name Description Gene Coverage Ratio Count Count Ratio Sample Ratio % P00762 TRY1_RAT Anionic trypsin-1 Prss1 1 8 8.13 0.526 0.001 0.004 -0.279 P08592 A4_RAT Amyloid beta A4 protein App 1 2 1.17 0.546 0.010 0.004 -0.263 Q62696 DLG1_RAT Disks large homolog 1 Dlg1 1 1 1.32 -
Processing Effects on Fresh and Frozen Meat Color Dale L
Processing Effects on Fresh and Frozen Meat Color Dale L. Huffman* Introduction pletely filled with hydrophobic groups. Deep in the hy- drophobic interior is a cleft where heme is located. According In recent years there has been a considerable amount of to Adam (1976) the globin moiety does not assume its native interest in further processing of fresh meat. The primary con- conformation unless it is complexed with heme. The heme sideration in evaluating freshness is color. The purpose of this group serves to stabilize the configuration of the myoglobin manuscript is to assess the present status of processed fresh molecule. The heme is oriented in such a way that the vinyl meat color. groups are buried in the hydrophobic interior and the car- boxyl group of the propionic acids extend from the interior Myoglobin and color in fresh meat where they form part of the polar surface. Both the propionic Although a number of pigments are present in muscle, acid side chains are believed to be hydrogen bonded to myoglobin is generally the only pigment present in large serine, histidine, and arginine amino acid residues on the enough quantities to color meat. Hemoglobin constitutes globin moiety (Antonini and Brunori, 1971). According to 12-30% of the total muscle pigment. Since the two pigments Govindarajan (1973) the entire inner portion of the heme is have similar spectral properties, myoglobin alone is used as surrounded by side chains of nonpolar amino acids. It is due an index of fresh meat color. to these nonpolar surroundings that ferrous iron (Fef2) in The myoglobin content of muscle tissue varies not only be- myoglobin is able to reversibly combine with oxygen (Govin- tween species but between age group as well as muscle types darajan, 1973).