Description of Amazonian Theobroma L. Collections, Species Identification, and Characterization of Interspecific Hybrids
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Theobroma Cacao L.) Populations Based on Chloroplast Markers
diversity Article Geographic Patterns of Genetic Variation among Cacao (Theobroma cacao L.) Populations Based on Chloroplast Markers Helmuth Edisson Nieves-Orduña 1,2, Markus Müller 1 , Konstantin V. Krutovsky 1,2,3,4 and Oliver Gailing 1,2,* 1 Department of Forest Genetics and Forest Tree Breeding, Georg-August University of Göttingen, 37077 Göttingen, Germany; [email protected] (H.E.N.-O.); [email protected] (M.M.); [email protected] (K.V.K.) 2 Center for Integrated Breeding Research, Georg-August University of Göttingen, 37075 Göttingen, Germany 3 Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, 660036 Krasnoyarsk, Russia 4 Laboratory of Population Genetics, N.I. Vavilov Institute of General Genetics, Russian Academy of Sciences, 119991 Moscow, Russia * Correspondence: [email protected] Abstract: The cacao tree (Theobroma cacao L.) is native to the Amazon basin and widely cultivated in the tropics to produce seeds, the valuable raw material for the chocolate industry. Conservation of cacao genetic resources and their availability for breeding and production programs are vital for securing cacao supply. However, relatively little is still known about the phylogeographic structure Citation: Nieves-Orduña, H.E.; of natural cacao populations. We studied the geographic distribution of cpDNA variation in different Müller, M.; Krutovsky, K.V.; Gailing, populations representing natural cacao stands, cacao farms in Ecuador, and breeding populations. O. Geographic Patterns of Genetic Variation among Cacao (Theobroma We used six earlier published cacao chloroplast microsatellite markers to genotype 233 cacao samples. cacao L.) Populations Based on In total, 23 chloroplast haplotypes were identified. -
Cocoa (Theobroma Cacao L.) Malvaceae
Cocoa (Theobroma cacao L.) Malvaceae • Cocoa is an important commercial plantation crop of the world • Cocoa is a crop of humid tropics and so it was introduced as a mixed crop in India in areas where the environments suit the crop • It is cultivated in coconut and arecanut plantations large scale from 1970 onwards • It is grown as an under- storey intercrop with sufficient shade in southern states of India • In India, the current production is about 12,000 Metric Tonnes and Tamil Nadu produces about 400 Metric Tonnes. Climate and soil • The natural habitat of the cocoa tree is in the lower storey of the evergreen rainforest, and climatic factors, particularly temperature and rainfall, are important in encouraging optimum growth • Cocoa is a perennial crop, and it can withstand different seasonal variations with good health and yield potential • Cocoa is normally cultivated at altitudes upto 1200 m above MSL with an annual rainfall of 1000mm to 2000mm and a relative humidity of 80 % with maximum 350C and minimum temperature of 150C • Cocoa can be grown as intercrop in coconut and arecanut gardens. It is predominantly grown on red lateritic soils. It thrives well on wide range of soil types with • pH ranging from 4.5- 8.0 with optimum being 6.5- 7.0. Varieties • There are three varietal types in cocoa namely Criollo, Forastero and Trinitario. • Forastero types are known to perform well under Indian conditions. • Kerala Agricultural University has released 7 improved clones of Forestero types namely CCRP – 1, CCRP – 2, CCRP – 3, CCRP – 4, CCRP– 5, CCRP – 6 and CCRP – 7 and 3 hybrids CCRP – 8, CCRP – 9, CCRP – 10. -
Theobroma Grandiflorum Cupuacu - Theo...Puacu - Theobroma Grandiflorum Cupuacu - Theobroma Grandiflorum
Database Entry: Cupuacu - Theobroma grandiflorum Cupuacu - Theo...puacu - Theobroma grandiflorum Cupuacu - Theobroma grandiflorum Family: Sterculiaceae Genus: Theobroma Species: grandiflorum Common Names: Cupuasu, Copoasu, Cupuacu Part Used: Fruit, Seed PLANT DESCRIPTION Documented Properties Nutritive, stimulant, tonic & Actions: Plant Chemicals Vitamins, minerals, fats, fatty acids Include: Cupuacu is a small to medium tree in the Rainforest canopy which belongs to the Chocolate family and can reach up to 20 meters in height. Cupuacu fruit has been a primary food source in the Rainforest for both indigenous tribes and animals alike. The Cupuacu fruit is about the size of a cantaloupe and is highly prized for its creamy exotic tasting pulp. The pulp occupies approximately one-third of the fruit and is used throughout Brazil and Peru to make fresh juice, ice cream, jam and tarts. The fruit ripens in the rainy months from January to April and is considered a culinary delicacy in South American cities where demand outstrips supply. Like chocolate, the fruit has a large center seed pod filled with "beans", which the Tikuna tribe utilize for abdominal pains. Cupuacu is found throughout the Rainforest regions with it seeds being dispersed by birds and monkeys which feast on the tasty fruit pulp. Indigenous tribes as well as local communities along the Amazon have cultivated Cupuacu as a primary food source for generations. In remote times, Cupuacu seeds were traded along the Rio Negro and Upper Orinoco rivers where river tribes drink Cupuacu juice after it has been blessed by a shaman to facilitate difficult births. ETHNOBOTANY: WORLDWIDE USES Amazonia Food, Pain(Abdominal), Difficult Birth Brazil Food Venezuela Food References: ● Balee, William. -
Ultrasonic Application As a Potential Alternative to Tempering in Dark Chocolate Manufacturing
ULTRASONIC APPLICATION AS A POTENTIAL ALTERNATIVE TO TEMPERING IN DARK CHOCOLATE MANUFACTURING BY ELIANA ROSALES DISSERTATION Submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Food Science and Human Nutrition with a concentration in Food Science in the Graduate College of the University of Illinois at Urbana-Champaign, 2014 Urbana, Illinois Doctoral Committee: Associate Professor Hao Feng, Chair Professor Nicki J. Engeseth, Director of Research Professor Keith R. Cadwallader Professor Shelly J. Schmidt i Abstract In chocolate manufacturing tempering is crucial; tempering encourages the formation of the appropriate polymorphic form in cocoa butter (Form V) which influences important physical and functional characteristics such as color, texture, gloss and shelf life. Highly sophisticated machinery has been developed to optimize this key process; however conventional systems are still disadvantageous due its high demands of energy, time and space. Chocolate manufacturing industry is continuously trying to improve existing production processes or invent new methods for manufacturing high quality chocolate to improve energy and time efficiency. Ultrasonication technologies have become an efficient tool for large scale commercial applications, such as defoaming, emulsification, extrusion, extraction, waste treatment among others. It also, has been demonstrated that sonication influences crystallization in various lipid sources and could be employed to achieve specific polymorphic conformations. The hypothesis of this research was that sonocrystallization will favor formation of polymorph V, yielding similar quality characteristics to traditional tempered chocolate. The objective was to explore the effects of ultrasound application in dark chocolate formulation and its effects on crystallization using instrumental and sensorial methods. Dark chocolate was formulated, conched, and either tempered or sonicated. -
Redalyc.SPATIAL STRUCTURE of Theobroma Subincanum Mart. AND
Revista Árvore ISSN: 0100-6762 [email protected] Universidade Federal de Viçosa Brasil de Freitas Encinas Dardengo, Juliana; Bandini Rossi, Ana Aparecida; da Silva, Carolina Joana; Silveira, Marcos SPATIAL STRUCTURE OF Theobroma subincanum Mart. AND Theobroma speciosum Willd. ex Spreng. IN THE PARQUE NACIONAL DO JURUENA, MATO GROSSO STATE, BRAZIL Revista Árvore, vol. 41, núm. 1, 2017, pp. 1-9 Universidade Federal de Viçosa Viçosa, Brasil Available in: http://www.redalyc.org/articulo.oa?id=48851057001 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Spatial structure of theobroma subincanum ... 1 SPATIAL STRUCTURE OF Theobroma subincanum Mart. AND Theobroma speciosum Willd. ex Spreng. IN THE PARQUE NACIONAL DO JURUENA, MATO GROSSO STATE, BRAZIL 1 Juliana de Freitas Encinas Dardengo 2* , Ana Aparecida Bandini Rossi 3, Carolina Joana da Silva 4 and Marcos Silveira 5 1 Received on 27.11.2013 accepted for publication on 09.11.2016. 2 Universidade Federal do Amazonas, Programa de Pós-Graduação em Biodiversidade e Biotecnologia, Manaus, AM - Brasil. E-mail: <[email protected]>. 3 Universidade do Estado de Mato Grosso, Fundação Universidade do Estado de Mato Grosso, Departamento de Ciências Biológicas, Alta Floresta, MT - Brasil. E-mail: <[email protected]>. 4 Universidade do Estado de Mato Grosso, Centro de Pesquisa de Limnologia, Biodiversidade e Etnobiologia do Pantanal, Cáceres, MT - Brasil. E-mail: <[email protected]>. 5 Universidade Federal do Acre, Centro de Ciências Biológicas e da Natureza, Rio Branco, AC - Brasil. -
Cacao Strategy Final
CacaoNet is the Global Network for Cacao Genetic Resources, coordinated by Bioversity International with member representatives from various cocoa research institutes and organizations that support cocoa research. CacaoNet aims to optimize the conservation and use of cacao genetic resources as the foundation of a sustainable cocoa economy (from farmers through research to consumers), by coordinating and strengthening the conservation and related research efforts of a worldwide network of public and private sector stakeholders. www.cacaonet.org Bioversity International is a world leading research-for-development non-profit organization, working towards a world in which smallholder farming communities in developing countries are thriving and sustainable. Bioversity International’s purpose is to investigate the use and conservation of agricultural biodiversity in order to achieve better nutrition, improve smallholders’ livelihoods and enhance agricultural sustainability. Bioversity International works with a global range of partners to maximize impact, to develop capacity and to ensure that all stakeholders have an effective voice. www.bioversityinternational.org Bioversity International is a member of the CGIAR Consortium, a global partnership that unites organizations engaged in research for a food secure future. CGIAR research is dedicated to reducing rural poverty increasing food security, improving human health and nutrition, and ensuring more sustainable management of natural resources. It is carried out by the 15 centers who are members of the CGIAR Consortium in close collaboration with hundreds of partner organizations, including national and regional research institutes, civil society organizations, academia, and the private sector. www.cgiar.org While every effort is made to ensure the accuracy of the information reported in this publication, CacaoNet, Bioversity International and any contributing authors cannot accept any responsibility for the consequences of the use of this information. -
Chec List What Survived from the PLANAFLORO Project
Check List 10(1): 33–45, 2014 © 2014 Check List and Authors Chec List ISSN 1809-127X (available at www.checklist.org.br) Journal of species lists and distribution What survived from the PLANAFLORO Project: PECIES S Angiosperms of Rondônia State, Brazil OF 1* 2 ISTS L Samuel1 UniCarleialversity of Konstanz, and Narcísio Department C.of Biology, Bigio M842, PLZ 78457, Konstanz, Germany. [email protected] 2 Universidade Federal de Rondônia, Campus José Ribeiro Filho, BR 364, Km 9.5, CEP 76801-059. Porto Velho, RO, Brasil. * Corresponding author. E-mail: Abstract: The Rondônia Natural Resources Management Project (PLANAFLORO) was a strategic program developed in partnership between the Brazilian Government and The World Bank in 1992, with the purpose of stimulating the sustainable development and protection of the Amazon in the state of Rondônia. More than a decade after the PLANAFORO program concluded, the aim of the present work is to recover and share the information from the long-abandoned plant collections made during the project’s ecological-economic zoning phase. Most of the material analyzed was sterile, but the fertile voucher specimens recovered are listed here. The material examined represents 378 species in 234 genera and 76 families of angiosperms. Some 8 genera, 68 species, 3 subspecies and 1 variety are new records for Rondônia State. It is our intention that this information will stimulate future studies and contribute to a better understanding and more effective conservation of the plant diversity in the southwestern Amazon of Brazil. Introduction The PLANAFLORO Project funded botanical expeditions In early 1990, Brazilian Amazon was facing remarkably in different areas of the state to inventory arboreal plants high rates of forest conversion (Laurance et al. -
Long-Reads Reveal That the Chloroplast Genome Exists in Two Distinct Versions in Most Plants
GBE Long-Reads Reveal That the Chloroplast Genome Exists in Two Distinct Versions in Most Plants Weiwen Wang* and Robert Lanfear* Division of Ecology and Evolution, Research School of Biology, Australian National University, Acton, Australian Capital Territory, Australia *Corresponding authors: E-mails: [email protected]; [email protected]. Accepted: November 15, 2019 Downloaded from https://academic.oup.com/gbe/article/11/12/3372/5637229 by guest on 02 October 2021 Data deposition: The Herrania umbratica and Siraitia grosvenorii chloroplast genomes in this project have been deposited at NCBI under the accession MN163033 and MK279915. Abstract The chloroplast genome usually has a quadripartite structure consisting of a large single copy region and a small single copy region separated by two long inverted repeats. It has been known for some time that a single cell may contain at least two structural haplotypes of this structure, which differ in the relative orientation of the single copy regions. However, the methods required to detect and measure the abundance of the structural haplotypes are labor-intensive, and this phenomenon remains understudied. Here, we develop a new method, Cp-hap, to detect all possible structural haplotypes of chloroplast genomes of quadripartite structure using long-read sequencing data. We use this method to conduct a systematic analysis and quantification of chloroplast structural haplotypes in 61 land plant species across 19 orders of Angiosperms, Gymnosperms, and Pteridophytes. Our results show that there are two chloroplast structural haplotypes which occur with equal frequency in most land plant individuals. Nevertheless, species whose chloroplast genomes lack inverted repeats or have short inverted repeats have just a single structural haplotype. -
The Age of Chocolate: a Diversification History of Theobroma and Malvaceae
ORIGINAL RESEARCH published: 10 November 2015 doi: 10.3389/fevo.2015.00120 The age of chocolate: a diversification history of Theobroma and Malvaceae James E. Richardson 1, 2*, Barbara A. Whitlock 3, Alan W. Meerow 4 and Santiago Madriñán 5 1 Programa de Biología, Universidad del Rosario, Bogotá, Colombia, 2 Tropical Diversity Section, Royal Botanic Garden Edinburgh, Edinburgh, UK, 3 Department of Biology, University of Miami, Coral Gables, FL, USA, 4 United States Department of Agriculture—ARS—SHRS, National Clonal Germplasm Repository, Miami, FL, USA, 5 Laboratorio de Botánica y Sistemática, Departamento de Ciencias Biológicas, Universidad de los Andes, Bogotá, Colombia Dated molecular phylogenies of broadly distributed lineages can help to compare patterns of diversification in different parts of the world. An explanation for greater Neotropical diversity compared to other parts of the tropics is that it was an accident of the Andean orogeny. Using dated phylogenies, of chloroplast ndhF and nuclear DNA WRKY sequence datasets, generated using BEAST we demonstrate that the diversification of the genera Theobroma and Herrania occurred from 12.7 (11.6–14.9 [95% HPD]) million years ago (Ma) and thus coincided with Andean uplift from the mid-Miocene and that this lineage had a faster diversification rate than other major clades in Malvaceae. We also demonstrate that Theobroma cacao, the source of chocolate, diverged from its most recent common ancestor 9.9 (7.7–12.9 [95% HPD]) Ma, in the Edited by: Federico Luebert, mid-to late-Miocene, suggesting that this economically important species has had ample Universität Bonn, Germany time to generate significant within-species genetic diversity that is useful information Reviewed by: for a developing chocolate industry. -
Distribution of Flavonoids Among Malvaceae Family Members – a Review
Distribution of flavonoids among Malvaceae family members – A review Vellingiri Vadivel, Sridharan Sriram, Pemaiah Brindha Centre for Advanced Research in Indian System of Medicine (CARISM), SASTRA University, Thanjavur, Tamil Nadu, India Abstract Since ancient times, Malvaceae family plant members are distributed worldwide and have been used as a folk remedy for the treatment of skin diseases, as an antifertility agent, antiseptic, and carminative. Some compounds isolated from Malvaceae members such as flavonoids, phenolic acids, and polysaccharides are considered responsible for these activities. Although the flavonoid profiles of several Malvaceae family members are REVIEW REVIEW ARTICLE investigated, the information is scattered. To understand the chemical variability and chemotaxonomic relationship among Malvaceae family members summation of their phytochemical nature is essential. Hence, this review aims to summarize the distribution of flavonoids in species of genera namely Abelmoschus, Abroma, Abutilon, Bombax, Duboscia, Gossypium, Hibiscus, Helicteres, Herissantia, Kitaibelia, Lavatera, Malva, Pavonia, Sida, Theobroma, and Thespesia, Urena, In general, flavonols are represented by glycosides of quercetin, kaempferol, myricetin, herbacetin, gossypetin, and hibiscetin. However, flavonols and flavones with additional OH groups at the C-8 A ring and/or the C-5′ B ring positions are characteristic of this family, demonstrating chemotaxonomic significance. Key words: Flavones, flavonoids, flavonols, glycosides, Malvaceae, phytochemicals INTRODUCTION connate at least at their bases, but often forming a tube around the pistils. The pistils are composed of two to many connate he Malvaceae is a family of flowering carpels. The ovary is superior, with axial placentation, with plants estimated to contain 243 genera capitate or lobed stigma. The flowers have nectaries made with more than 4225 species. -
Theobroma) in Bolivia
ZENTRUM FÜR BIODIVERSITÄT UND NACHHALTIGE LANDNUTZUNG SEKTION BIODIVERSITÄT, ÖKOLOGIE UND NATURSCHUTZ − CENTRE OF BIODIVERSITY AND SUSTAINABLE LAND USE − SECTION: BIODIVERSITY, ECOLOGY AND NATURE CONSERVATION POLLINATION ECOLOGY AND SPATIAL GENETIC POPULATION STRUCTURE OF WILD AND CULTIVATED SPECIES OF CACAO (THEOBROMA) IN BOLIVIA Dissertation zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultäten der Georg-August-Universität Göttingen im Promotionsprogram Biodiversität und Ökologie der Georg-August University School of Science (GAUSS) vorgelegt von Claudia Chumacero de Schawe aus La Paz, Bolivien Göttingen, August 2013 Betreuungsausschuss Prof. Dr. Teja Tscharntke, Agrarökologie, Georg August Universität Göttingen, Deutschland Dr. Michael Kessler, Institut für Systematische Botanik, Universität Zürich, Schweiz Prof. Dr. Isabell Hensen, Institut für Biologie/Geobotanik und Botanischer Garten, Martin-Luther- Universität Halle-Wittenberg, Deutschland Dr. Walter Durka, Department Biozönoseforschung Helmholtz-Zentrum für Umweltforschung – UFZ, Deutschland Mitglieder der Prüfungskommission Referent: Prof. Dr. Teja Tscharntke, Agrarökologie, Georg-August Universität Göttingen Korreferentin: Prof. Dr. Isabell Hensen, Institut für Biologie/Geobotanik und Botanischer Garten, Martin-Luther-Universität Halle-Wittenberg Korreferent: Dr. Michael Kessler, Institut für Systematische Botanik, Universität Zürich Weitere Mitglieder der Prüfungskommission: Prof. Dr. Dirk Gansert, Zentrum für Biodiversität und nachhaltige Landnutzung, -
Theobroma Cacao Sterculiaceae Fruta Recalcitrante
“La pérdida de hábitats es como quemar prólogo . una librería sin leer sus libros” Richard Deverell, director, Real Jardín Botánico, Kew, 2019 por qué esta presentación? pérdida de territorio boscoso en la Amazonía colombiana • desde los años 2000 el 65% de la deforestación ocurre en la Amazonía • pérdida sostenida por deforestación de más de 50,000 Ha/ año • pérdida afecta hasta los Parques Nacionales (e.g. La Macarena) por qué se están destruyendo los bosques amazónicos? por escala de valor? por qué repetir la destrucción del bosque alto Andino o la del bosque seco tropical? responsabilidad social y promoción social de los botánicos, ahora! prólogo . caña de azúcar: • introducida en ~1535-1540 • ocupa > 80% tierra agrícola en el Valle • produce el azúcar del país y exporta abscisión foliar no funcional pilosidad foliar cortante quema para la cosecha caña de azúcar: • producción sostenible? • conflicto en varios municipios por el agua si se buscan otras opciones, cuáles? bosque seco tropical = reserva mayor de opciones del bosque original no queda 1.5%! una práctica de ~460 años puede cambiar! sí pueden haber más opciones gana-gana! fuentes: Díaz-Merlano 2006; Patiño 1969 2/49 La Amazonía en el podio del Tour de France, o el uso inesperado de sus plantas D.G. Debouck X Congreso Colombiano de Botánica Florencia, 20 de agosto de 2019 3/49 PLAN 1. Unas definiciones (para meter a la Amazonía en [justa] perspectiva) 2. La Amazonía: zona de domesticación olvidada 3. La Amazonía, cuna de la primera migración americana más tiempo = mayor conocimiento de las plantas 4. En un ‘océano verde’, qué comer? domesticación diferencial de las raíces y de los árboles 5.