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Chapter 2 Literature Review
CHAPTER 2 LITERATURE REVIEW 2.1. BASIDIOMYCOTA (MACROFUNGI) Representatives of the fungi sensu stricto include four phyla: Ascomycota, Basidiomycota, Chytridiomycota and Zygomycota (McLaughlin et al., 2001; Seifert and Gams, 2001). Chytridiomycota and Zygomycota are described as lower fungi. They are characterized by vegetative mycelium with no septa, complete septa are only found in reproductive structures. Asexual and sexual reproductions are by sporangia and zygospore formation respectively. Ascomycota and Basidiomycota are higher fungi and have a more complex mycelium with elaborate, perforate septa. Members of Ascomycota produce sexual ascospores in sac-shaped cells (asci) while fungi in Basidiomycota produce sexual basidiospores on club-shaped basidia in complex fruit bodies. Anamorphic fungi are anamorphs of Ascomycota and Basidiomycota and usually produce asexual conidia (Nicklin et al., 1999; Kirk et al., 2001). The Basidiomycota contains about 30,000 described species, which is 37% of the described species of true Fungi (Kirk et al., 2001). They have a huge impact on human affairs and ecosystem functioning. Many Basidiomycota obtain nutrition by decaying dead organic matter, including wood and leaf litter. Thus, Basidiomycota play a significant role in the carbon cycle. Unfortunately, Basidiomycota frequently 5 attack the wood in buildings and other structures, which has negative economic consequences for humans. 2.1.1 LIFE CYCLE OF MUSHROOM (BASIDIOMYCOTA) The life cycle of mushroom (Figure 2.1) is beginning at the site of meiosis. The basidium is the cell in which karyogamy (nuclear fusion) and meiosis occur, and on which haploid basidiospores are formed (basidia are not produced by asexual Basidiomycota). Mushroom produce basidia on multicellular fruiting bodies. -
Study on Species of Phylloporus I: Neotropics and North America
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/45279837 Study on species of Phylloporus I: Neotropics and North America Article in Mycologia · July 2010 DOI: 10.3852/09-215 · Source: PubMed CITATIONS READS 11 203 2 authors: Maria Alice Neves Roy E Halling Federal University of Santa Catarina New York Botanical Garden 72 PUBLICATIONS 297 CITATIONS 141 PUBLICATIONS 1,496 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Boletinae of Australia View project Diversity and systematics of South-East Asian Boletineae View project All content following this page was uploaded by Roy E Halling on 29 May 2014. The user has requested enhancement of the downloaded file. Mycologia, 102(4), 2010, pp. 923–943. DOI: 10.3852/09-215 # 2010 by The Mycological Society of America, Lawrence, KS 66044-8897 Study on species of Phylloporus I: Neotropics and North America Maria Alice Neves1 (Halling 1989, Orijel-Garibay et al. 2008, Osmundson Departamento de Sistema´tica e Ecologia, Campus 1, et al. 2007). In Belize these forests occur at lower Universidade Federal da Paraı´ba, Cidade elevation, where members of the Boletaceae also are Universita´ria, Joa˜o Pessoa, PB, 58051-970, Brazil present and associated with these hosts (Ortiz- Roy E. Halling Santana et al. 2007). In Guyana species of Boletaceae Institute of Systematic Botany, The New York Botanical have been associated with Dicymbe species (Henkel et Garden, Bronx, New York, 10458-5126 al. 2002). Some of the areas that need more attention are the lowlands of central Amazonia, where Singer et al. -
Boletes from Belize and the Dominican Republic
Fungal Diversity Boletes from Belize and the Dominican Republic Beatriz Ortiz-Santana1*, D. Jean Lodge2, Timothy J. Baroni3 and Ernst E. Both4 1Center for Forest Mycology Research, Northern Research Station, USDA-FS, Forest Products Laboratory, One Gifford Pinchot Drive, Madison, Wisconsin 53726-2398, USA 2Center for Forest Mycology Research, Northern Research Station, USDA-FS, PO Box 1377, Luquillo, Puerto Rico 00773-1377, USA 3Department of Biological Sciences, PO Box 2000, SUNY-College at Cortland, Cortland, New York 13045, USA 4Buffalo Museum of Science, 1020 Humboldt Parkway, Buffalo, New York 14211, USA Ortiz-Santana, B., Lodge, D.J., Baroni, T.J. and Both, E.E. (2007). Boletes from Belize and the Dominican Republic. Fungal Diversity 27: 247-416. This paper presents results of surveys of stipitate-pileate Boletales in Belize and the Dominican Republic. A key to the Boletales from Belize and the Dominican Republic is provided, followed by descriptions, drawings of the micro-structures and photographs of each identified species. Approximately 456 collections from Belize and 222 from the Dominican Republic were studied comprising 58 species of boletes, greatly augmenting the knowledge of the diversity of this group in the Caribbean Basin. A total of 52 species in 14 genera were identified from Belize, including 14 new species. Twenty-nine of the previously described species are new records for Belize and 11 are new for Central America. In the Dominican Republic, 14 species in 7 genera were found, including 4 new species, with one of these new species also occurring in Belize, i.e. Retiboletus vinaceipes. Only one of the previously described species found in the Dominican Republic is a new record for Hispaniola and the Caribbean. -
How to Distinguish Amanita Smithiana from Matsutake and Catathelasma Species
VOLUME 57: 1 JANUARY-FEBRUARY 2017 www.namyco.org How to Distinguish Amanita smithiana from Matsutake and Catathelasma species By Michael W. Beug: Chair, NAMA Toxicology Committee A recent rash of mushroom poisonings involving liver failure in Oregon prompted Michael Beug to issue the following photos and information on distinguishing the differences between the toxic Amanita smithiana and edible Matsutake and Catathelasma. Distinguishing the choice edible Amanita smithiana Amanita smithiana Matsutake (Tricholoma magnivelare) from the highly poisonous Amanita smithiana is best done by laying the stipe (stem) of the mushroom in the palm of your hand and then squeezing down on the stipe with your thumb, applying as much pressure as you can. Amanita smithiana is very firm but if you squeeze hard, the stipe will shatter. Matsutake The stipe of the Matsutake is much denser and will not shatter (unless it is riddled with insect larvae and is no longer in good edible condition). There are other important differences. The flesh of Matsutake peels or shreds like string cheese. Also, the stipe of the Matsutake is widest near the gills Matsutake and tapers gradually to a point while the stipe of Amanita smithiana tends to be bulbous and is usually widest right at ground level. The partial veil and ring of a Matsutake is membranous while the partial veil and ring of Amanita smithiana is powdery and readily flocculates into small pieces (often disappearing entirely). For most people the difference in odor is very distinctive. Most collections of Amanita smithiana have a bleach-like odor while Matsutake has a distinctive smell of old gym socks and cinnamon redhots (however, not all people can distinguish the odors). -
The Phylogeny of Selected Phylloporus Species, Inferred from NUC-LSU and ITS Sequences, and Descriptions of New Species from the Old World
The phylogeny of selected Phylloporus species, inferred from NUC-LSU and ITS sequences, and descriptions of new species from the Old World Maria Alice Neves, Manfred Binder, Roy Halling, David Hibbett & Kasem Soytong Fungal Diversity An International Journal of Mycology ISSN 1560-2745 Fungal Diversity DOI 10.1007/s13225-012-0154-0 1 23 Your article is protected by copyright and all rights are held exclusively by The Mushroom Research Foundation. This e-offprint is for personal use only and shall not be self- archived in electronic repositories. If you wish to self-archive your work, please use the accepted author’s version for posting to your own website or your institution’s repository. You may further deposit the accepted author’s version on a funder’s repository at a funder’s request, provided it is not made publicly available until 12 months after publication. 1 23 Author's personal copy Fungal Diversity DOI 10.1007/s13225-012-0154-0 The phylogeny of selected Phylloporus species, inferred from NUC-LSU and ITS sequences, and descriptions of new species from the Old World Maria Alice Neves & Manfred Binder & Roy Halling & David Hibbett & Kasem Soytong Received: 12 November 2011 /Accepted: 11 January 2012 # The Mushroom Research Foundation 2012 Abstract The phylogeny of Phylloporus (Boletaceae) has of Phylloporus and includes 20 species from different not been well studied, and the taxonomic relationships of geographic regions. Six taxa of Phylloporus from the this genus have varied considerably among authors. The OldWorldareherepresented.Phylloporus cyanescens following study presents phylogenetic relationships of is a new combination for an Australasian taxon formerly Phylloporus based on two nuclear ribosomal DNA named as a variety of P. -
<I>Xerocomus Porophyllus</I>
ISSN (print) 0093-4666 © 2013. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/124.255 Volume 124, pp. 255–262 April–June 2013 Xerocomus porophyllus sp. nov., morphologically intermediate between Phylloporus and Xerocomus Wen-Juan Yan, Tai-Hui Li *, Ming Zhang & Ting Li State Key Laboratory of Applied Microbiology, South China (The Ministry—Province Joint Development), Guangdong Institute of Microbiology, Guangzhou 510070, Guangdong, China *Correspondence to: [email protected] Abstract— Xerocomus porophyllus, discovered from Dinghushan Biosphere Reserve in Guangdong province (southern China), is described as a new species. It is a morphologically intermediate taxon between Phylloporus and Xerocomus since its hymenophore is lamellate around the stipe but strongly anastomosing to distinctly faveolate or poroid towards pileus margin. Molecular analyses of nuclear rDNA ITS and LSU sequences, however, indicate that it has a closer genetic relationship with Xerocomus than with Phylloporus. Key words— Basidiomycota, Boletaceae, Boletales, phylogeny, taxonomy Introduction Phylloporus Quél. and Xerocomus Quél. belong to the family Boletaceae and have a close relationship, whether Phylloporus has been considered as a primitive group in the family (Corner 1972) or as a derived genus next to Xerocomus (Binder 1999; Binder & Hibbett 2006). Molecular data have shown the Xerocomus subtomentosus complex to be closely related to Phylloporus (Binder 1999). The lamellate hymenophore inPhylloporus and the wide poroid or tubular one in Xerocomus are still used as the main morphological characters for differentiating the two genera (Neves & Halling 2010; Neves et al. 2012). Worldwide, Phylloporus encompasses about 70 named species (Neves et al. 2012), 21 of which have been reported from China (Teng 1963; Zang & Zeng 1978; Li et al. -
FUNGI of the SAND PRAIRIE-SCRUB OAK NATURE PRESERVE Illinois Nongame Wildlife Conservation Fund 1993-1994 Small Project Program Report
0 FUNGI OF THE SAND PRAIRIE-SCRUB OAK NATURE PRESERVE Illinois Nongame Wildlife Conservation Fund 1993-1994 Small Project Program Report August 10, 1994 0 Dr . Andrew S . Methven Botany Department . Eastern Illinois University Charleston, IL 61920 Introduction The vegetation found in the Sand Prairie-Scrub Oak Nature Preserve (nine miles south of Havana, between Bath and Kilbourne, Sec . 23 and parts of Secs . 14 and 26, T20N, R9W', 3PM, Mason Co) is a mosaic of three unique vascular plant communities - sand prairie, savanna, and closed forest . The closed forests in the preserve are dominated by a stable community of shade intolerant trees including black oak (Quercus velutina), blackjack oak (Quercus marilandica), black hickory, (Carya texana), and mockernut hickory (Carya tanentosa) which thrive under xeric conditions in acidic, sandy soils . Despite the number of floristic and ecological studies completed to date on these closed forests, there has been little effort to catalog the fungi which occur in these habitats and assess their ecological role in the maintenance and preservation of the forest . Although the importance of saprobic fungi as agents of decomposition and nutrient recycling is well-established, the role of fungi as mycorrhizal associates with vascular plants has only recently begun to be assessed and understood . Mycorrhizae are unique symbiotic associations which form between fungal hyphae and the roots of vascular plants . Since the fungal hyphae penetrate the soil to a mach greater extent than roots, they have a greater surface area in contact with soil moisture and nutrients than vascular plants . As such, the fungal hyphae facilitate the uptake of water and nutrients from the soil and transport to the plant host . -
Inventory of Macrofungi in Four National Capital Region Network Parks
National Park Service U.S. Department of the Interior Natural Resource Program Center Inventory of Macrofungi in Four National Capital Region Network Parks Natural Resource Technical Report NPS/NCRN/NRTR—2007/056 ON THE COVER Penn State Mont Alto student Cristie Shull photographing a cracked cap polypore (Phellinus rimosus) on a black locust (Robinia pseudoacacia), Antietam National Battlefield, MD. Photograph by: Elizabeth Brantley, Penn State Mont Alto Inventory of Macrofungi in Four National Capital Region Network Parks Natural Resource Technical Report NPS/NCRN/NRTR—2007/056 Lauraine K. Hawkins and Elizabeth A. Brantley Penn State Mont Alto 1 Campus Drive Mont Alto, PA 17237-9700 September 2007 U.S. Department of the Interior National Park Service Natural Resource Program Center Fort Collins, Colorado The Natural Resource Publication series addresses natural resource topics that are of interest and applicability to a broad readership in the National Park Service and to others in the management of natural resources, including the scientific community, the public, and the NPS conservation and environmental constituencies. Manuscripts are peer-reviewed to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and is designed and published in a professional manner. The Natural Resources Technical Reports series is used to disseminate the peer-reviewed results of scientific studies in the physical, biological, and social sciences for both the advancement of science and the achievement of the National Park Service’s mission. The reports provide contributors with a forum for displaying comprehensive data that are often deleted from journals because of page limitations. Current examples of such reports include the results of research that addresses natural resource management issues; natural resource inventory and monitoring activities; resource assessment reports; scientific literature reviews; and peer reviewed proceedings of technical workshops, conferences, or symposia. -
The Genus Phylloporus (Boletaceae, Boletales) from China: Morphological and Multilocus DNA Sequence Analyses
Fungal Diversity (2013) 58:73–101 DOI 10.1007/s13225-012-0184-7 The genus Phylloporus (Boletaceae, Boletales) from China: morphological and multilocus DNA sequence analyses Nian-Kai Zeng & Li-Ping Tang & Yan-Chun Li & Bau Tolgor & Xue-Tai Zhu & Qi Zhao & Zhu L. Yang Received: 24 May 2012 /Accepted: 28 June 2012 /Published online: 29 July 2012 # Mushroom Research Foundation 2012 Abstract Species of the genus Phylloporus in China were to both Europe and East Asia, or to both East Asia and investigated based on morphology and molecular phyloge- North/Central America, were uncovered. Clades look to netic analysis of a three-locus (nrLSU, ITS and tef-1a) DNA have taxa from both sides of the Pacific and Europe/Asia sequence dataset. Twenty-one phylogenetic species were though. recognized among the studied collections. Seven of them are described as new: P. brunneiceps, P. imbricatus, P. Keywords Biogeography . New taxa . Phylogeneticspecies . maculatus, P. pachycystidiatus, P. rubeolus, P. rubrosqua- Species diversity . Taxonomy mosus, and P. yunnanensis. In addition, four of them corre- spond with the previous morphology-based taxa: P. bellus, P. luxiensis, P. parvisporus, and P. rufescens. The remaining ten phylogenetic species were not described due to the Introduction paucity of the materials. A key to the Chinese morpholog- ically recognizable taxa was provided. A preliminary bio- Species of Boletaceae are interesting and important in for- geographical analysis showed that (1) Pylloporus species in estry for their mycorrhizal properties and the edibility of East Asia and Southeast Asia are mostly closely related, (2) many species (Singer 1986; Li and Song 2002; Wang et al. -
Molecular Phylogenetics of Porcini Mushrooms (Boletus Section Boletus) ⇑ Bryn T.M
Molecular Phylogenetics and Evolution 57 (2010) 1276–1292 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Molecular phylogenetics of porcini mushrooms (Boletus section Boletus) ⇑ Bryn T.M. Dentinger a,b,c,n, , Joseph F. Ammirati d, Ernst E. Both e, Dennis E. Desjardin f, Roy E. Halling g, Terry W. Henkel h, Pierre-Arthur Moreau i, Eiji Nagasawa j, Kasem Soytong k, Andy F. Taylor l, Roy Watling m, Jean-Marc Moncalvo b, David J. McLaughlin a a Department of Plant Biology, University of Minnesota, St. Paul, MN 55108, USA b Department of Natural History, Royal Ontario Museum, Toronto, ON, Canada M5S 2C6 c Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3DS, UK d Department of Biology, University of Washington, Seattle, WA 98195, USA e Buffalo Museum of Science, Buffalo, NY 14211, USA f Department of Biology, San Francisco State University, San Francisco, CA 94132, USA g Institute of Systematic Botany, New York Botanical Garden, Bronx, NY 10458, USA h Department of Biological Science, Humboldt State University, Arcata, CA 95521, USA i Département de Botanique, Faculté des sciences pharmaceutiques et biologiques, Université Lille Nord de France, F-59006 Lille, France j Tottori Mycological Institute, 211, Kokoge, Tottori 689-1125, Japan k Faculty of Agricultural Technology, King Mongkut’s Institute of Technology Ladkrabang, Bangkok, Thailand l Macaulay Land Use Research Institute, Craigiebuckler, Aberdeen, AB15 8QH Scotland, UK m Caledonian Mycological Enterprises, 26 Blinkbonny Avenue, Edinburgh, EH4 3HU Scotland, UK n Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada M5S 3B2 article info abstract Article history: Porcini (Boletus section Boletus: Boletaceae: Boletineae: Boletales) are a conspicuous group of wild, edible Received 12 May 2010 mushrooms characterized by fleshy fruiting bodies with a poroid hymenophore that is ‘‘stuffed’’ with Revised 17 September 2010 white hyphae when young. -
Identification Key : Unique Criterion
GROUP 1 - IDENTIFICATION KEY : UNIQUE CRITERION. 1.1 Parasitic bolete of the Parasitic Bolete Common Earthball. Xerocomus parasiticus 1.2 Base of the stipe yellow, Chrome-footed Bolete outside and inside. Tylopilus chromapes GROUP 1 Unique criterion. Blackish, scaly, 1.3 fruitbodies. Old Man of the Woods Strobilomyces strobilaceus GROUP 1, The following. 1.4 Fruitbodies with a very Snow White Bolete long stipe. Leccinum holopus GROUPE 1 - IDENTIFICATION KEY : UNIQUE CRITERION. 1.5 Boletinellus merulioides Often with a lateral Boletinellus merulioides stipe, inter-veined and large pores. Blood-red on all parts of Blood-red cap Blood-red pore Blood-red stipe White to 1.6 and stipe. surface bluing deeply lacerated- yellowish flesh, Apple Bolete the fruitbodies. when bruised. reticulated. blueing when cut. Boletus frostii GROUP 1 Unique criterion, the following. 1.7 Russell’s Bolete Stipe highly lacerated Boletellus reticulated at length. russellii 6 species listed in 1.8 Boletes with lamelloid North America, 2 Boletes of genus gills. in Eastern Phylloporus et Canada. Gastroboletus GROUP 1 - IDENTIFICATION KEY : UNIQUE CRITERION. This yellowish-brown bolete is easily recognizable because it always accompanies the Common Earthball and its curved stipe joins the base of the fruitbody it 1.1 Parasitic bolete of the accompanies. Parasitic Bolete Common Earthball. It is said to be edible, but the Common Earthball is toxic. Xerocomus parasiticus This variable-looking bolete can be recognized as soon as it is extracted from the ground. The lower end of its stipe is bright yellow both on the outside and inside. 1.2 Base of the stipe yellow, The color of its cap ranges from tan to reddish pink. -
Supplementary Fig
TAXONOMY phyrellus* L.D. Go´mez & Singer, Xanthoconium Singer, Xerocomus Que´l.) Taxonomical implications.—We have adopted a con- Paxillaceae Lotsy (Alpova C. W. Dodge, Austrogaster* servative approach to accommodate findings from Singer, Gyrodon Opat., Meiorganum*Heim,Melano- recent phylogenies and propose a revised classifica- gaster Corda, Paragyrodon, (Singer) Singer, Paxillus tion that reflects changes based on substantial Fr.) evidence. The following outline adds no additional Boletineae incertae sedis: Hydnomerulius Jarosch & suborders, families or genera to the Boletales, Besl however, excludes Serpulaceae and Hygrophoropsi- daceae from the otherwise polyphyletic suborder Sclerodermatineae Binder & Bresinsky Coniophorineae. Major changes on family level Sclerodermataceae E. Fisch. (Chlorogaster* Laessøe & concern the Boletineae including Paxillaceae (incl. Jalink, Horakiella* Castellano & Trappe, Scleroder- Melanogastraceae) as an additional family. The ma Pers, Veligaster Guzman) Strobilomycetaceae E.-J. Gilbert is here synonymized Boletinellaceae P. M. Kirk, P. F. Cannon & J. C. with Boletaceae in absence of characters or molecular David (Boletinellus Murill, Phlebopus (R. Heim) evidence that would suggest maintaining two separate Singer) families. Chamonixiaceae Ju¨lich, Octavianiaceae Loq. Calostomataceae E. Fisch. (Calostoma Desv.) ex Pegler & T. W. K Young, and Astraeaceae Zeller ex Diplocystaceae Kreisel (Astraeus Morgan, Diplocystis Ju¨lich are already recognized as invalid names by the Berk. & M.A. Curtis, Tremellogaster E. Fisch.) Index Fungorum (www.indexfungorum.com). In ad- Gyroporaceae (Singer) Binder & Bresinsky dition, Boletinellaceae Binder & Bresinsky is a hom- (Gyroporus Que´l.) onym of Boletinellaceae P. M. Kirk, P. F. Cannon & J. Pisolithaceae Ulbr. (Pisolithus Alb. & Schwein.) C. David. The current classification of Boletales is tentative and includes 16 families and 75 genera. For Suillineae Besl & Bresinsky 16 genera (marked with asterisks) are no sequences Suillaceae (Singer) Besl & Bresinsky (Suillus S.F.