Phylogeny and Systematics of Kewa (Kewaceae) Authors: Mats Thulin, Anders Larsson, Erika J
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The 2014 Golden Gate National Parks Bioblitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event
National Park Service U.S. Department of the Interior Natural Resource Stewardship and Science The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 ON THIS PAGE Photograph of BioBlitz participants conducting data entry into iNaturalist. Photograph courtesy of the National Park Service. ON THE COVER Photograph of BioBlitz participants collecting aquatic species data in the Presidio of San Francisco. Photograph courtesy of National Park Service. The 2014 Golden Gate National Parks BioBlitz - Data Management and the Event Species List Achieving a Quality Dataset from a Large Scale Event Natural Resource Report NPS/GOGA/NRR—2016/1147 Elizabeth Edson1, Michelle O’Herron1, Alison Forrestel2, Daniel George3 1Golden Gate Parks Conservancy Building 201 Fort Mason San Francisco, CA 94129 2National Park Service. Golden Gate National Recreation Area Fort Cronkhite, Bldg. 1061 Sausalito, CA 94965 3National Park Service. San Francisco Bay Area Network Inventory & Monitoring Program Manager Fort Cronkhite, Bldg. 1063 Sausalito, CA 94965 March 2016 U.S. Department of the Interior National Park Service Natural Resource Stewardship and Science Fort Collins, Colorado The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. -
Caryophyllales 2018 Instituto De Biología, UNAM September 17-23
Caryophyllales 2018 Instituto de Biología, UNAM September 17-23 LOCAL ORGANIZERS Hilda Flores-Olvera, Salvador Arias and Helga Ochoterena, IBUNAM ORGANIZING COMMITTEE Walter G. Berendsohn and Sabine von Mering, BGBM, Berlin, Germany Patricia Hernández-Ledesma, INECOL-Unidad Pátzcuaro, México Gilberto Ocampo, Universidad Autónoma de Aguascalientes, México Ivonne Sánchez del Pino, CICY, Centro de Investigación Científica de Yucatán, Mérida, Yucatán, México SCIENTIFIC COMMITTEE Thomas Borsch, BGBM, Germany Fernando O. Zuloaga, Instituto de Botánica Darwinion, Argentina Victor Sánchez Cordero, IBUNAM, México Cornelia Klak, Bolus Herbarium, Department of Biological Sciences, University of Cape Town, South Africa Hossein Akhani, Department of Plant Sciences, School of Biology, College of Science, University of Tehran, Iran Alexander P. Sukhorukov, Moscow State University, Russia Michael J. Moore, Oberlin College, USA Compilation: Helga Ochoterena / Graphic Design: Julio C. Montero, Diana Martínez GENERAL PROGRAM . 4 MONDAY Monday’s Program . 7 Monday’s Abstracts . 9 TUESDAY Tuesday ‘s Program . 16 Tuesday’s Abstracts . 19 WEDNESDAY Wednesday’s Program . 32 Wednesday’s Abstracs . 35 POSTERS Posters’ Abstracts . 47 WORKSHOPS Workshop 1 . 61 Workshop 2 . 62 PARTICIPANTS . 63 GENERAL INFORMATION . 66 4 Caryophyllales 2018 Caryophyllales General program Monday 17 Tuesday 18 Wednesday 19 Thursday 20 Friday 21 Saturday 22 Sunday 23 Workshop 1 Workshop 2 9:00-10:00 Key note talks Walter G. Michael J. Moore, Berendsohn, Sabine Ya Yang, Diego F. Registration -
Alphabetical Lists of the Vascular Plant Families with Their Phylogenetic
Colligo 2 (1) : 3-10 BOTANIQUE Alphabetical lists of the vascular plant families with their phylogenetic classification numbers Listes alphabétiques des familles de plantes vasculaires avec leurs numéros de classement phylogénétique FRÉDÉRIC DANET* *Mairie de Lyon, Espaces verts, Jardin botanique, Herbier, 69205 Lyon cedex 01, France - [email protected] Citation : Danet F., 2019. Alphabetical lists of the vascular plant families with their phylogenetic classification numbers. Colligo, 2(1) : 3- 10. https://perma.cc/2WFD-A2A7 KEY-WORDS Angiosperms family arrangement Summary: This paper provides, for herbarium cura- Gymnosperms Classification tors, the alphabetical lists of the recognized families Pteridophytes APG system in pteridophytes, gymnosperms and angiosperms Ferns PPG system with their phylogenetic classification numbers. Lycophytes phylogeny Herbarium MOTS-CLÉS Angiospermes rangement des familles Résumé : Cet article produit, pour les conservateurs Gymnospermes Classification d’herbier, les listes alphabétiques des familles recon- Ptéridophytes système APG nues pour les ptéridophytes, les gymnospermes et Fougères système PPG les angiospermes avec leurs numéros de classement Lycophytes phylogénie phylogénétique. Herbier Introduction These alphabetical lists have been established for the systems of A.-L de Jussieu, A.-P. de Can- The organization of herbarium collections con- dolle, Bentham & Hooker, etc. that are still used sists in arranging the specimens logically to in the management of historical herbaria find and reclassify them easily in the appro- whose original classification is voluntarily pre- priate storage units. In the vascular plant col- served. lections, commonly used methods are systema- Recent classification systems based on molecu- tic classification, alphabetical classification, or lar phylogenies have developed, and herbaria combinations of both. -
Analysis of Phylogenomic Datasets Reveals Conflict, Concordance, And
Smith et al. BMC Evolutionary Biology (2015) 15:150 DOI 10.1186/s12862-015-0423-0 METHODOLOGY ARTICLE Open Access Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants Stephen A Smith1*, Michael J Moore2, Joseph W Brown1 and Ya Yang1 Abstract Background: The use of transcriptomic and genomic datasets for phylogenetic reconstruction has become increasingly common as researchers attempt to resolve recalcitrant nodes with increasing amounts of data. The large size and complexity of these datasets introduce significant phylogenetic noise and conflict into subsequent analyses. The sources of conflict may include hybridization, incomplete lineage sorting, or horizontal gene transfer, and may vary across the phylogeny. For phylogenetic analysis, this noise and conflict has been accommodated in one of several ways: by binning gene regions into subsets to isolate consistent phylogenetic signal; by using gene-tree methods for reconstruction, where conflict is presumed to be explained by incomplete lineage sorting (ILS); or through concatenation, where noise is presumed to be the dominant source of conflict. The results provided herein emphasize that analysis of individual homologous gene regions can greatly improve our understanding of the underlying conflict within these datasets. Results: Here we examined two published transcriptomic datasets, the angiosperm group Caryophyllales and the aculeate Hymenoptera, for the presence of conflict, concordance, and gene duplications in individual homologs across the phylogeny. We found significant conflict throughout the phylogeny in both datasets and in particular along the backbone. While some nodes in each phylogeny showed patterns of conflict similar to what might be expected with ILS alone, the backbone nodes also exhibited low levels of phylogenetic signal. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Las Familias Aizoaceae, Molluginaceae Y Phytolaccaceae (Caryophyllales) En El Estado De Aguascalientes, México
Núm. 46: 27-47 Julio 2018 ISSN electrónico: 2395-9525 Polibotánica ISSN electrónico: 2395-9525 [email protected] Instituto Politécnico Nacional México http:www.polibotanica.mx LAS FAMILIAS AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) EN EL ESTADO DE AGUASCALIENTES, MÉXICO THE FAMILIES AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) IN THE STATE OF AGUASCALIENTES, MEXICO M.H. Sandoval-Ortega, y M.E. Siqueiros-Delgado LAS FAMILIAS AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) EN EL ESTADO DE AGUASCALIENTES, MÉXICO THE FAMILIES AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) IN THE STATE OF AGUASCALIENTES, MEXICO. Núm. 46: 27-47 México. Julio 2018 Instituto Politécnico Nacional DOI: 10.18387/polibotanica.46.2 27 Núm. 46: 27-47 Julio 2018 ISSN electrónico: 2395-9525 LAS FAMILIAS AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) EN EL ESTADO DE AGUASCALIENTES, MÉXICO THE FAMILIES AIZOACEAE, MOLLUGINACEAE Y PHYTOLACCACEAE (CARYOPHYLLALES) IN THE STATE OF AGUASCALIENTES, MEXICO M.H. Sandoval-Ortega M.E. Siqueiros-Delgado/[email protected] Sandoval-Ortega, M.H., Herbario HUAA, Departamento de Biología, Centro de Ciencias Básicas, y M.E. Siqueiros-Delgado Universidad Autónoma de Aguascalientes. Avenida Universidad 940, Ciudad Universitaria, CP 20131, Aguascalientes, Aguascalientes, México. LAS FAMILIAS AIZOACEAE, MOLLUGINACEAE Y RESUMEN: En el estado de Aguascalientes la familia Aizoaceae está representada por PHYTOLACCACEAE los géneros Trianthema, con la especie T. portulacastrum, y Sesuvium, con S. (CARYOPHYLLALES) EN EL ESTADO DE humifusum, esta última especie es un nuevo registro para el estado y el país. La familia AGUASCALIENTES, Molluginaceae está representada por los géneros Glinus, con la especie G. radiatus, y MÉXICO Mollugo, con M. verticillata. Por último, la familia Phytolaccaceae está representada por dos géneros Phytolacca y Rivina; para el género Phytolacca se reportan las especies P. -
Plethora of Plants - Collections of the Botanical Garden, Faculty of Science, University of Zagreb (2): Glasshouse Succulents
NAT. CROAT. VOL. 27 No 2 407-420* ZAGREB December 31, 2018 professional paper/stručni članak – museum collections/muzejske zbirke DOI 10.20302/NC.2018.27.28 PLETHORA OF PLANTS - COLLECTIONS OF THE BOTANICAL GARDEN, FACULTY OF SCIENCE, UNIVERSITY OF ZAGREB (2): GLASSHOUSE SUCCULENTS Dubravka Sandev, Darko Mihelj & Sanja Kovačić Botanical Garden, Department of Biology, Faculty of Science, University of Zagreb, Marulićev trg 9a, HR-10000 Zagreb, Croatia (e-mail: [email protected]) Sandev, D., Mihelj, D. & Kovačić, S.: Plethora of plants – collections of the Botanical Garden, Faculty of Science, University of Zagreb (2): Glasshouse succulents. Nat. Croat. Vol. 27, No. 2, 407- 420*, 2018, Zagreb. In this paper, the plant lists of glasshouse succulents grown in the Botanical Garden from 1895 to 2017 are studied. Synonymy, nomenclature and origin of plant material were sorted. The lists of species grown in the last 122 years are constructed in such a way as to show that throughout that period at least 1423 taxa of succulent plants from 254 genera and 17 families inhabited the Garden’s cold glass- house collection. Key words: Zagreb Botanical Garden, Faculty of Science, historic plant collections, succulent col- lection Sandev, D., Mihelj, D. & Kovačić, S.: Obilje bilja – zbirke Botaničkoga vrta Prirodoslovno- matematičkog fakulteta Sveučilišta u Zagrebu (2): Stakleničke mesnatice. Nat. Croat. Vol. 27, No. 2, 407-420*, 2018, Zagreb. U ovom članku sastavljeni su popisi stakleničkih mesnatica uzgajanih u Botaničkom vrtu zagrebačkog Prirodoslovno-matematičkog fakulteta između 1895. i 2017. Uređena je sinonimka i no- menklatura te istraženo podrijetlo biljnog materijala. Rezultati pokazuju kako je tijekom 122 godine kroz zbirku mesnatica hladnog staklenika prošlo najmanje 1423 svojti iz 254 rodova i 17 porodica. -
South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2013 South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae) Lendel, Anita Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-93287 Dissertation Published Version Originally published at: Lendel, Anita. South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae). 2013, University of Zurich, Faculty of Science. South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae) _________________________________________________________________________________ Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr.sc.nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Anita Lendel aus Kroatien Promotionskomitee: Prof. Dr. H. Peter Linder (Vorsitz) PD. Dr. Reto Nyffeler Prof. Dr. Elena Conti Zürich, 2013 Table of Contents Acknowledgments 1 Introduction 3 Chapter 1. Phylogenetics and taxonomy of the tribe Cereeae s.l., with particular focus 15 on the subtribe Trichocereinae (Cactaceae – Cactoideae) Chapter 2. Floral evolution in the South American tribe Cereeae s.l. (Cactaceae: 53 Cactoideae): Pollination syndromes in a comparative phylogenetic context Chapter 3. Contemporaneous and recent radiations of the world’s major succulent 86 plant lineages Chapter 4. Tackling the molecular dating paradox: underestimated pitfalls and best 121 strategies when fossils are scarce Outlook and Future Research 207 Curriculum Vitae 209 Summary 211 Zusammenfassung 213 Acknowledgments I really believe that no one can go through the process of doing a PhD and come out without being changed at a very profound level. -
Chorological and Taxonomic Notes on African Plants, 2
Botany Letters ISSN: 2381-8107 (Print) 2381-8115 (Online) Journal homepage: http://www.tandfonline.com/loi/tabg21 Chorological and taxonomic notes on African plants, 2 Alexander P. Sukhorukov, Filip Verloove, M. Ángeles Alonso, Irina V. Belyaeva, Christopher Chapano, Manuel B. Crespo, Mohamed H. El Aouni, Ridha El Mokni, Alfred Maroyi, Munyaradzi Davis Shekede, Alicia Vicente, Alex Dreyer & Maria Kushunina To cite this article: Alexander P. Sukhorukov, Filip Verloove, M. Ángeles Alonso, Irina V. Belyaeva, Christopher Chapano, Manuel B. Crespo, Mohamed H. El Aouni, Ridha El Mokni, Alfred Maroyi, Munyaradzi Davis Shekede, Alicia Vicente, Alex Dreyer & Maria Kushunina (2017): Chorological and taxonomic notes on African plants, 2, Botany Letters, DOI: 10.1080/23818107.2017.1311281 To link to this article: http://dx.doi.org/10.1080/23818107.2017.1311281 Published online: 24 Apr 2017. Submit your article to this journal View related articles View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=tabg21 Download by: [109.252.83.95] Date: 24 April 2017, At: 08:35 BOTANY LETTERS, 2017 http://dx.doi.org/10.1080/23818107.2017.1311281 Chorological and taxonomic notes on African plants, 2 Alexander P. Sukhorukova , Filip Verlooveb, M. Ángeles Alonsoc, Irina V. Belyaevad, Christopher Chapanoe,h, Manuel B. Crespoc, Mohamed H. El Aounif, Ridha El Moknif,g, Alfred Maroyih, Munyaradzi Davis Shekedei, Alicia Vicentec, Alex Dreyerj and Maria Kushuninak aDepartment of -
St Helena the Peaks National Park Conservation Management Plan
St Helena The Peaks National Park Conservation Management Plan [2019-2024] 1 Contents of the Management Plan 1. THE VISION FOR THE NATIONAL PARK . .. 4 National Park location map . .. 5 2. NATIONAL PARK MANAGEMENT 2a.1 Rational for management . 6 2a.2 Identification of Features Influencing Management . 8 2a.3 Condition of the Features Influencing Management and the Main Factors affecting them . 13 3. MANAGEMENT OBJECTIVES 3a. Conservation of biodiversity objectives . 25 3b. Water security and climate change resilience objectives . 27 3c. Socio-economic objectives . 29 4. WORK PROGRAMME 4a. Conservation work programme . 31 4b. Water security and climate change resilience work programme . 36 4c. Socio-economic work programme . 42 5. RISK ASSESSMENT . 48 6. REQUIREMENTS FOR MONITORING, REPORTING, AND ASSESSMENT . 51 Appendix 1: SITE LOCATION AND DESIGNATION A1.1. Site location and relevant authorities . 52 A1.2 .Statutory, planning and other designations . 53 A1.3. Public access . 53 A1.4. Current issues and constraints . 54 Appendix 2: ENVIRONMENTAL INFORMATION A2.1. Climate . 55 A2.2. Geology, hydrogeology and soils . 56 St Helena soil quality map (2018) . 59 A2.3. Hydrology . 60 A2.4. Projected changes in climate . 61 A2.5. History of recent management a. Brief history of the area . 61 b. Management in the last 5 years . 62 A2.6. Current issues and constraints . 63 Appendix 3: BIOLOGICAL INFORMATION A3.1. Habitats and Vegetation communities . 64 A3.2. Important native plant species species . 66 A3.3. Trends of important native plant species . 68 A3.4. Predicted impacts of climate change on existing and potential important Features . 68 A3.5. -
Phylogenetic Placement and Generic Re-Circumscriptions of The
TAXON 65 (2) • April 2016: 249–261 Powell & al. • Generic recircumscription in Schlechteranthus Phylogenetic placement and generic re-circumscriptions of the multilocular genera Arenifera, Octopoma and Schlechteranthus (Aizoaceae: Ruschieae): Evidence from anatomical, morphological and plastid DNA data Robyn F. Powell,1,2 James S. Boatwright,1 Cornelia Klak3 & Anthony R. Magee2,4 1 Department of Biodiversity & Conservation Biology, University of the Western Cape, Private Bag X17, Bellville, Cape Town, South Africa 2 Compton Herbarium, South African National Biodiversity Institute, Private Bag X7, Claremont 7735, Cape Town, South Africa 3 Bolus Herbarium, Department of Biological Sciences, University of Cape Town, 7701, Rondebosch, South Africa 4 Department of Botany & Plant Biotechnology, University of Johannesburg, P.O. Box 524, Auckland Park 2006, Johannesburg, South Africa Author for correspondence: Robyn Powell, [email protected] ORCID RFP, http://orcid.org/0000-0001-7361-3164 DOI http://dx.doi.org/10.12705/652.3 Abstract Ruschieae is the largest tribe in the highly speciose subfamily Ruschioideae (Aizoaceae). A generic-level phylogeny for the tribe was recently produced, providing new insights into relationships between the taxa. Octopoma and Arenifera are woody shrubs with multilocular capsules and are distributed across the Succulent Karoo. Octopoma was shown to be polyphyletic in the tribal phylogeny, but comprehensive sampling is required to confirm its polyphyly. Arenifera has not previously been sampled and therefore its phylogenetic placement in the tribe is uncertain. In this study, phylogenetic sampling for nine plastid regions (atpB-rbcL, matK, psbJ-petA, rpl16, rps16, trnD-trnT, trnL-F, trnQUUG-rps16, trnS-trnG) was expanded to include all species of Octopoma and Arenifera, to assess phylogenetic placement and relationships of these genera. -
A New Species and Hybrid in the St Helen a Endemic Genus Trochetiopsis
EDINB. 1. BOT. 52 (2): 205-213 (1995) 205 A NEW SPECIES AND HYBRID IN THE ST HELEN A ENDEMIC GENUS TROCHETIOPSIS Q. C. B. CRONK * The discovery in historic herbaria of an overlooked extinct endemic from the island of St Helena is reported. The first descriptions of St Helena Ebony, Trochetiopsis melanoxylon (Sterculiaceae), and the specimens associated with them in the herbaria of Oxford University (OXF) and the Natural History Museum, London (BM), do not match living and later-collected material, and instead represent an extinct plant. A new name is therefore needed for living St Helena Ebony: Trochetiopsis ebenus Cronk sp. nov. The hybrid between this species and the related T erythroxylon is also described here: Trochetiopsis x benjamini Cronk hybr. nov. (Sterculiaceae), and chromosome counts of 2n =40 are reported for the hybrid and both parents for the first time. The re-assessment of the extinct ebony emphasizes the importance of historic herbarium collections for the study of species extinction. INTRODUCTION In 1601 and 1610, at the beginning and end of his voyage to the East Indies, Franvois Pyrard de Laval touched at St Helena, an isolated island in the South Atlantic Ocean. He wrote: 'Sur Ie haut de la montagne il y a force arbre d'Ebene, et de bois de Rose' (Pyrard, 1679; Gray, 1890) - the first mention in print of species of Trochetiopsis (i.e. St Helena Redwood and St Helena Ebony). The island was settled in 1659, and the settlers of the English East India Company immediately put these ecologically important species to use.