Chlorococcales (Chlorophyta) of Sindh, Pakistan
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The Hawaiian Freshwater Algae Biodiversity Survey
Sherwood et al. BMC Ecology 2014, 14:28 http://www.biomedcentral.com/1472-6785/14/28 RESEARCH ARTICLE Open Access The Hawaiian freshwater algae biodiversity survey (2009–2014): systematic and biogeographic trends with an emphasis on the macroalgae Alison R Sherwood1*, Amy L Carlile1,2, Jessica M Neumann1, J Patrick Kociolek3, Jeffrey R Johansen4, Rex L Lowe5, Kimberly Y Conklin1 and Gernot G Presting6 Abstract Background: A remarkable range of environmental conditions is present in the Hawaiian Islands due to their gradients of elevation, rainfall and island age. Despite being well known as a location for the study of evolutionary processes and island biogeography, little is known about the composition of the non-marine algal flora of the archipelago, its degree of endemism, or affinities with other floras. We conducted a biodiversity survey of the non-marine macroalgae of the six largest main Hawaiian Islands using molecular and microscopic assessment techniques. We aimed to evaluate whether endemism or cosmopolitanism better explain freshwater algal distribution patterns, and provide a baseline data set for monitoring future biodiversity changes in the Hawaiian Islands. Results: 1,786 aquatic and terrestrial habitats and 1,407 distinct collections of non-marine macroalgae were collected from the islands of Kauai, Oahu, Molokai, Maui, Lanai and Hawaii from the years 2009–2014. Targeted habitats included streams, wet walls, high elevation bogs, taro fields, ditches and flumes, lakes/reservoirs, cave walls and terrestrial areas. Sites that lacked freshwater macroalgae were typically terrestrial or wet wall habitats that were sampled for diatoms and other microalgae. Approximately 50% of the identifications were of green algae, with lesser proportions of diatoms, red algae, cyanobacteria, xanthophytes and euglenoids. -
JJB 079 255 261.Pdf
植物研究雑誌 J. J. Jpn. Bo t. 79:255-261 79:255-261 (2004) Phylogenetic Phylogenetic Analysis of the Tetrasporalean Genus Asterococcus Asterococcus (Chlorophyceae) sased on 18S 18S Ribosomal RNA Gene Sequences Atsushi Atsushi NAKAZA WA and Hisayoshi NOZAKI Department Department of Biological Sciences ,Graduate School of Science ,University of Tokyo , Hongo Hongo 7-3-1 ,Bunkyo-ku ,Tokyo ,113 ・0033 JAPAN (Received (Received on October 30 ,2003) Nucleotide Nucleotide sequences (1642 bp) from 18S ribosomal RNA genes were analyzed for 100 100 strains of the clockwise (CW) group of Chlorophyceae to deduce the phylogenetic position position of the immotile colonial genus Asterococcus Scherffel , which is classified in the Palmellopsidaceae Palmellopsidaceae of Tetrasporales. We found that the genus Asterococcus and two uni- cellular , volvocalean genera , Lobochlamys Proschold & al. and Oogamochlamys Proschold Proschold & al., formed a robust monophyletic group , which was separated from two te 位asporalean clades , one composed of Tetraspora Link and Paulschulzia Sk 吋a and the other other containing the other palme l1 0psidacean genus Chlamydocaps αFot t. Therefore , the Tetrasporales Tetrasporales in the CW group is clearly polyphyletic and taxonomic revision of the order order and the Palmellopsidaceae is needed. Key words: 18S rRNA gene ,Asterococcus ,Palmellopsidaceae ,phylogeny ,Tetraspor- ales. ales. Asterococcus Asterococcus Scherffel (1908) is a colo- Recently , Ettl and Gartner (1 988) included nial nial green algal genus that is characterized Asterococcus in the family Palmello- by an asteroid chloroplast in the cell and psidaceae , because cells of this genus have swollen swollen gelatinous layers surrounding the contractile vacuoles and lack pseudoflagella immotile immotile colony (e. g. -
Phylogenetic Placement of Botryococcus Braunii (Trebouxiophyceae) and Botryococcus Sudeticus Isolate Utex 2629 (Chlorophyceae)1
J. Phycol. 40, 412–423 (2004) r 2004 Phycological Society of America DOI: 10.1046/j.1529-8817.2004.03173.x PHYLOGENETIC PLACEMENT OF BOTRYOCOCCUS BRAUNII (TREBOUXIOPHYCEAE) AND BOTRYOCOCCUS SUDETICUS ISOLATE UTEX 2629 (CHLOROPHYCEAE)1 Hoda H. Senousy, Gordon W. Beakes, and Ethan Hack2 School of Biology, University of Newcastle upon Tyne, Newcastle upon Tyne NE1 7RU, UK The phylogenetic placement of four isolates of a potential source of renewable energy in the form of Botryococcus braunii Ku¨tzing and of Botryococcus hydrocarbon fuels (Metzger et al. 1991, Metzger and sudeticus Lemmermann isolate UTEX 2629 was Largeau 1999, Banerjee et al. 2002). The best known investigated using sequences of the nuclear small species is Botryococcus braunii Ku¨tzing. This organism subunit (18S) rRNA gene. The B. braunii isolates has a worldwide distribution in fresh and brackish represent the A (two isolates), B, and L chemical water and is occasionally found in salt water. Although races. One isolate of B. braunii (CCAP 807/1; A race) it grows relatively slowly, it sometimes forms massive has a group I intron at Escherichia coli position 1046 blooms (Metzger et al. 1991, Tyson 1995). Botryococcus and isolate UTEX 2629 has group I introns at E. coli braunii strains differ in the hydrocarbons that they positions 516 and 1512. The rRNA sequences were accumulate, and they have been classified into three aligned with 53 previously reported rRNA se- chemical races, called A, B, and L. Strains in the A race quences from members of the Chlorophyta, includ- accumulate alkadienes; strains in the B race accumulate ing one reported for B. -
Diversity of the Genera of Chlorophyta in Fresh Waters of District Swat Nwfp
Pak. J. Bot., 43(3): 1759-1764, 2011. DIVERSITY OF THE GENERA OF CHLOROPHYTA IN FRESH WATERS OF DISTRICT SWAT N.W.F.P PAKISTAN ASGHAR ALI1, ZABTA KHAN SHINWARI2 AND MUHAMMAD KHAN LEGHARI3 1Department of Botany, G.P.G. Jahanzeb College Swat, Pakistan 2Department of Biotechnology, Quaid-e-Azam University Islamabad, Pakistan 3Pakistan Museum of Natural History, Islamabad, Pakistan Abstract Fifty six genera of green algae were collected from ten different localities of District Swat, belonging to 25 families and 9 genera of Chlorophyta from December 2006 August 2008. Family Oocystaceae with 39 species was most commonly found, next to it were families Scenedesmaceae with18 species and Desmidiaceae with 14 species. The genera Oocystis and Tetraedron were represented by 10 species and Cosmarium with 7 species occurred most commonly. Among the recorded genera 13 (23.2%) were Unicellular, 25 (44.6%) were Colonial, 9 (16.7%) were Unbranched filamentous, 4 (7.1%) were branched filamentous, 1 (1.7%) was Pseudofilamentous, 1 (1.7%) was Mesh-like, 2 (3.5%) were Heterotrichous and 1 (1.7%) was with Irregular amorphous thallus. Highest proportion of Chlorophycean members was recorded from Kanju area 89 and lowest was recorded from Kalam 69. Introduction Results and Discussion The Valley of Swat a part of Malakand Division covers Fifty six genera containing 138 species belonging to 25 5737 square kilometers (estimated). The elevation of the families and 9 orders have been collected from various fresh valley is 630 to 3000m above sea level. Swat is located at a water habitats. Collected algal members were identified up to distance of 170 km from Peshawar and 270 km from Federal species level. -
Microalgae Culture Collection 1985-1986
SERI/SP-232-2863 UC Category: 61c Microalgae Culture Collection 1985-1986 January 1986 Prepared by the Microalgal Technology Research Group Solar Energy Research Institute A Division of Midwest Res earch Institute 1617 Cole Boulevard Golden, Colorado 80401 Prepared for the U.S. Department of Energy Contract No. DE-AC02-83CH10093 NOTICE This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Department of Energy, nor any of their employees, nor any of their contractors, subcontractors, or their employees, makes any warranty, express or implied, or assumes any legal liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. TABLE OF CONTENTS Introduction , 1 Explanatory Notes. •••••••••••••..•••••..•••••••••••••..••••••••••••••••••• 2 Requests for Cultures. ••.•••.•••••..••..••••••••••••••••••••.••••.•••••••••J List of Strains Amphora sp. 5/AMPHO-l ••.••.•••...•••••• .. ..••••••.•••.••• .. .•••.• .. • • • • 4 Ankistrodesmus falcatus S/ANKIS-l ..••••••••••••••••.••..•••••••••••••• 7 Boekelovia sp. S/BOEKE-1 • • • . • • • . • . • • • . • • • • • • • • • • . • . • • • • . • • • • . • . • 12 Botryococcus braunii S/BOTR Y-1 •.•.••••••••••••••••••••••••••••..•••••• 17 Chaetoceros gracilis Schutt S/CHAET-1 •• • • • • • • • • • • • . • • • . • • • • • • • • • • • • • 21 Chaetoceros sp. S/CHAET-2 ••. ••••••••.••••••.••••.....•.••••.•••••..•• -
Chlorophyta, Chlorococcales, Oocystaceae) Outside East Asia
Fottea 10(1): 141–144, 2010 141 First report of Makinoella tosaensis OKADA (Chlorophyta, Chlorococcales, Oocystaceae) outside East Asia František HINDÁK & Alica HINDÁKOVÁ Institute of Botany, Slovak Academy of Sciences, Dúbravská cesta 9, SK–84523 Bratislava, Slovakia; e–mail: [email protected], [email protected] Abstract: The morphology of Makinoella tosaensis Okada 1949, a chlorococcalean coenobial alga described from Japan and since then observed only in Korea, has been studied under the LM from field material and in laboratory cultures. Its collection from a small fountain in the campus park of the Slovak Academy of Sciences in Bratislava, Slovakia, is the first record outside East Asia. The morphology of coenobia and cells in this material is in agreement with published data of the species. Key words: Chlorococcales, coenobial green algae, morphology, taxonomy, Slovakia Introduction & FOTT 1983). Outside of Japan (cf. http:// protist.i.hosei.ac.jp/PDB/Images/chlorophyta/ In the algal flora of Slovakia project, special Makinoella/index.html), it was observed only in attention was paid to small artificial water bodies Korea (he g e w a l d et al. 1999). The strain SAG such as urban fountains. The diversity of algae 28.97, isolated by Hegewald from Korea, is kept was investigated in several fountains within the at the Algal Collection in Göttingen, Germany. city limits of Bratislava (HINDÁK 1977, 1980 a, b, The ultrastructure of this culture was investigated 1984, 1988, 1990, 1996; HINDÁK & HINDÁKOVÁ in detail by sc h n e p f & he g e w a l d (2000). This 1994, 1998; HINDÁKOVÁ & HINDÁK 1998), strain was also used for molecular analyses and including a small basin located at the campus compared with some other representatives of the of the Slovak Academy of Sciences (SAS) at Oocystaceae (he p p e r l e et al. -
Physical Data and Biological Data for Algae, Aquatic Invertebrates, and Fish from Selected Reaches on the Carson and Truckee Rivers, Nevada and California, 1993–97
U.S. Department of the Interior U.S. Geological Survey Physical Data and Biological Data for Algae, Aquatic Invertebrates, and Fish from Selected Reaches on the Carson and Truckee Rivers, Nevada and California, 1993–97 Open-File Report 02–012 Prepared as part of the NATIONAL WATER-QUALITY ASSESSMENT PROGRAM U.S. Department of the Interior U.S. Geological Survey Physical Data and Biological Data for Algae, Aquatic Invertebrates, and Fish from Selected Reaches on the Carson and Truckee Rivers, Nevada and California, 1993–97 By Stephen J. Lawrence and Ralph L. Seiler Open-File Report 02–012 Prepared as part of the NATIONAL WATER QUALITY ASSESSMENT PROGRAM Carson City, Nevada 2002 U.S. DEPARTMENT OF THE INTERIOR GALE A. NORTON, Secretary U.S. GEOLOGICAL SURVEY CHARLES G. GROAT, Director Any use of trade, product, or firm names in this publication is for descriptive purposes only and does not imply endorsement by the U.S. Government For additional information contact: District Chief U.S. Geological Survey U.S. Geological Survey Information Services 333 West Nye Lane, Room 203 Building 810 Carson City, NV 89706–0866 Box 25286, Federal Center Denver, CO 80225–0286 email: [email protected] http://nevada.usgs.gov CONTENTS Abstract.................................................................................................................................................................................. 1 Introduction........................................................................................................................................................................... -
Estudio Palinológico Y Palinofacies Del Jurásico Medio Y Tardío De La Provincia De Chubut: Sistemática, Bioestratigrafía Y Paleoecología”
UNIVERSIDAD NACIONAL DEL SUR TESIS DE DOCTOR EN GEOLOGÍA “Estudio palinológico y palinofacies del Jurásico Medio y Tardío de la Provincia de Chubut: Sistemática, Bioestratigrafía y Paleoecología” Lic. Daniela Olivera BAHÍA BLANCA ARGENTINA 2012 Prefacio Esta Tesis se presenta como parte de los requisitos para optar al grado Académico de Doctora en Geología, de la Universidad Nacional del Sur y no ha sido presentada previamente para la obtención de otro título en esta Universidad u otra. La misma contiene los resultados obtenidos en investigaciones llevadas a cabo en el Laboratorio de Palinología dependiente del Departamento de Geología-INGEOSUR, durante el período comprendido entre el 5 de mayo de 2009 y el 17 de agosto de 2012, bajo la dirección de la Dra. Ana María Zavattieri Investigadora Independiente del CONICET y la codirección de la Dra. Mirta Elena Quattrocchio Investigador Superior del CONICET. Daniela Elizabeth Olivera UNIVERSIDAD NACIONAL DEL SUR Secretaría General de Posgrado y Educación Continua La presente tesis ha sido aprobada el .…/.…/.….. , mereciendo la calificación de ......(……………………) I A mis afectos II AGRADECIMIENTOS A mis directoras, Dras. Ana Zavattieri y Mirta Quattrocchio por el apoyo brindado en todo momento, no solo desde lo académico, sino también desde lo personal, incentivándome constantemente a no bajar los brazos y continuar, aún cuando las circunstancias no siempre fueron las ideales. Sobre todo y ante todo, les doy las gracias por creer en mi. Agradezco a la Lic. Lorena Mussotto, compañera de oficina y amiga, con quien hemos transitado este camino, apoyándonos tanto desde lo académico como desde lo afectivo. Le doy las gracias a mi gran amiga y colega la Dra. -
Micractinium Tetrahymenae (Trebouxiophyceae, Chlorophyta), a New Endosymbiont Isolated from Ciliates
diversity Article Micractinium tetrahymenae (Trebouxiophyceae, Chlorophyta), a New Endosymbiont Isolated from Ciliates Thomas Pröschold 1,*, Gianna Pitsch 2 and Tatyana Darienko 3 1 Research Department for Limnology, Leopold-Franzens-University of Innsbruck, Mondsee, A-5310 Mondsee, Austria 2 Limnological Station, Department of Plant and Microbial Biology, University of Zürich, CH-8802 Kilchberg, Switzerland; [email protected] 3 Albrecht-von-Haller-Institute of Plant Sciences, Experimental Phycology and Culture Collection of Algae, Georg-August-University of Göttingen, D-37073 Göttingen, Germany; [email protected] * Correspondence: [email protected] Received: 28 April 2020; Accepted: 13 May 2020; Published: 15 May 2020 Abstract: Endosymbiosis between coccoid green algae and ciliates are widely distributed and occur in various phylogenetic lineages among the Ciliophora. Most mixotrophic ciliates live in symbiosis with different species and genera of the so-called Chlorella clade (Trebouxiophyceae). The mixotrophic ciliates can be differentiated into two groups: (i) obligate, which always live in symbiosis with such green algae and are rarely algae-free and (ii) facultative, which formed under certain circumstances such as in anoxic environments an association with algae. A case of the facultative endosymbiosis is found in the recently described species of Tetrahymena, T. utriculariae, which lives in the bladder traps of the carnivorous aquatic plant Utricularia reflexa. The green endosymbiont of this ciliate belonged to the genus Micractinium. We characterized the isolated algal strain using an integrative approach and compared it to all described species of this genus. The phylogenetic analyses using complex evolutionary secondary structure-based models revealed that this endosymbiont represents a new species of Micractinium, M. -
Lake Spokane Dissolved Oxygen Water Quality Attainment Plan Five Year Report
AVISTA CORPORATION LAKE SPOKANE DISSOLVED OXYGEN WATER QUALITY ATTAINMENT PLAN FIVE YEAR REPORT WASHINGTON 401 CERTIFICATION FERC LICENSE APPENDIX B, SECTION 5.6 SPOKANE RIVER HYDROELECTRIC PROJECT FERC PROJECT NO. 2545 Prepared By: March 24, 2017 [Page intentionally left blank] TABLE OF CONTENTS 1.0 INTRODUCTION ........................................................................................................ 1 2.0 BASELINE MONITORING ........................................................................................ 3 2.1 2016 Monitoring Results .............................................................................................. 3 2.2 Assessment of Lake Spokane Water Quality (2010 – 2016) ........................................ 7 2.3 Monitoring Recommendations ..................................................................................... 8 3.0 IMPLEMENTATION ACTIVITIES ........................................................................... 9 3.1 Studies .......................................................................................................................... 9 3.1.1 Carp Population Reduction Program ...................................................................... 10 3.1.2 Aquatic Weed Management .................................................................................... 10 3.2 2016 Implementation Measures .................................................................................. 11 3.2.1 Carp ........................................................................................................................ -
Compartmentalization of Mrnas in the Giant, Unicellular Green Algae
bioRxiv preprint doi: https://doi.org/10.1101/2020.09.18.303206; this version posted September 18, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Compartmentalization of mRNAs in the giant, 2 unicellular green algae Acetabularia acetabulum 3 4 Authors 5 Ina J. Andresen1, Russell J. S. Orr2, Kamran Shalchian-Tabrizi3, Jon Bråte1* 6 7 Address 8 1: Section for Genetics and Evolutionary Biology, Department of Biosciences, University of 9 Oslo, Kristine Bonnevies Hus, Blindernveien 31, 0316 Oslo, Norway. 10 2: Natural History Museum, University of Oslo, Oslo, Norway 11 3: Centre for Epigenetics, Development and Evolution, Department of Biosciences, University 12 of Oslo, Kristine Bonnevies Hus, Blindernveien 31, 0316 Oslo, Norway. 13 14 *Corresponding author 15 Jon Bråte, [email protected] 16 17 Keywords 18 Acetabularia acetabulum, Dasycladales, UMI, STL, compartmentalization, single-cell, mRNA. 19 20 Abstract 21 Acetabularia acetabulum is a single-celled green alga previously used as a model species for 22 studying the role of the nucleus in cell development and morphogenesis. The highly elongated 23 cell, which stretches several centimeters, harbors a single nucleus located in the basal end. 24 Although A. acetabulum historically has been an important model in cell biology, almost 25 nothing is known about its gene content, or how gene products are distributed in the cell. To 26 study the composition and distribution of mRNAs in A. -
Chloroplast Phylogenomic Analysis of Chlorophyte Green Algae Identifies a Novel Lineage Sister to the Sphaeropleales (Chlorophyceae) Claude Lemieux*, Antony T
Lemieux et al. BMC Evolutionary Biology (2015) 15:264 DOI 10.1186/s12862-015-0544-5 RESEARCHARTICLE Open Access Chloroplast phylogenomic analysis of chlorophyte green algae identifies a novel lineage sister to the Sphaeropleales (Chlorophyceae) Claude Lemieux*, Antony T. Vincent, Aurélie Labarre, Christian Otis and Monique Turmel Abstract Background: The class Chlorophyceae (Chlorophyta) includes morphologically and ecologically diverse green algae. Most of the documented species belong to the clade formed by the Chlamydomonadales (also called Volvocales) and Sphaeropleales. Although studies based on the nuclear 18S rRNA gene or a few combined genes have shed light on the diversity and phylogenetic structure of the Chlamydomonadales, the positions of many of the monophyletic groups identified remain uncertain. Here, we used a chloroplast phylogenomic approach to delineate the relationships among these lineages. Results: To generate the analyzed amino acid and nucleotide data sets, we sequenced the chloroplast DNAs (cpDNAs) of 24 chlorophycean taxa; these included representatives from 16 of the 21 primary clades previously recognized in the Chlamydomonadales, two taxa from a coccoid lineage (Jenufa) that was suspected to be sister to the Golenkiniaceae, and two sphaeroplealeans. Using Bayesian and/or maximum likelihood inference methods, we analyzed an amino acid data set that was assembled from 69 cpDNA-encoded proteins of 73 core chlorophyte (including 33 chlorophyceans), as well as two nucleotide data sets that were generated from the 69 genes coding for these proteins and 29 RNA-coding genes. The protein and gene phylogenies were congruent and robustly resolved the branching order of most of the investigated lineages. Within the Chlamydomonadales, 22 taxa formed an assemblage of five major clades/lineages.