Spring Phytoplankton and Periphyton Composition: Case Study from a Thermally Abnormal Lakes in Western Poland
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Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
Diversity of the Genera of Chlorophyta in Fresh Waters of District Swat Nwfp
Pak. J. Bot., 43(3): 1759-1764, 2011. DIVERSITY OF THE GENERA OF CHLOROPHYTA IN FRESH WATERS OF DISTRICT SWAT N.W.F.P PAKISTAN ASGHAR ALI1, ZABTA KHAN SHINWARI2 AND MUHAMMAD KHAN LEGHARI3 1Department of Botany, G.P.G. Jahanzeb College Swat, Pakistan 2Department of Biotechnology, Quaid-e-Azam University Islamabad, Pakistan 3Pakistan Museum of Natural History, Islamabad, Pakistan Abstract Fifty six genera of green algae were collected from ten different localities of District Swat, belonging to 25 families and 9 genera of Chlorophyta from December 2006 August 2008. Family Oocystaceae with 39 species was most commonly found, next to it were families Scenedesmaceae with18 species and Desmidiaceae with 14 species. The genera Oocystis and Tetraedron were represented by 10 species and Cosmarium with 7 species occurred most commonly. Among the recorded genera 13 (23.2%) were Unicellular, 25 (44.6%) were Colonial, 9 (16.7%) were Unbranched filamentous, 4 (7.1%) were branched filamentous, 1 (1.7%) was Pseudofilamentous, 1 (1.7%) was Mesh-like, 2 (3.5%) were Heterotrichous and 1 (1.7%) was with Irregular amorphous thallus. Highest proportion of Chlorophycean members was recorded from Kanju area 89 and lowest was recorded from Kalam 69. Introduction Results and Discussion The Valley of Swat a part of Malakand Division covers Fifty six genera containing 138 species belonging to 25 5737 square kilometers (estimated). The elevation of the families and 9 orders have been collected from various fresh valley is 630 to 3000m above sea level. Swat is located at a water habitats. Collected algal members were identified up to distance of 170 km from Peshawar and 270 km from Federal species level. -
Microalgae Culture Collection 1985-1986
SERI/SP-232-2863 UC Category: 61c Microalgae Culture Collection 1985-1986 January 1986 Prepared by the Microalgal Technology Research Group Solar Energy Research Institute A Division of Midwest Res earch Institute 1617 Cole Boulevard Golden, Colorado 80401 Prepared for the U.S. Department of Energy Contract No. DE-AC02-83CH10093 NOTICE This report was prepared as an account of work sponsored by the United States Government. Neither the United States nor the United States Department of Energy, nor any of their employees, nor any of their contractors, subcontractors, or their employees, makes any warranty, express or implied, or assumes any legal liability or responsibility for the accuracy, completeness or usefulness of any information, apparatus, product or process disclosed, or represents that its use would not infringe privately owned rights. TABLE OF CONTENTS Introduction , 1 Explanatory Notes. •••••••••••••..•••••..•••••••••••••..••••••••••••••••••• 2 Requests for Cultures. ••.•••.•••••..••..••••••••••••••••••••.••••.•••••••••J List of Strains Amphora sp. 5/AMPHO-l ••.••.•••...•••••• .. ..••••••.•••.••• .. .•••.• .. • • • • 4 Ankistrodesmus falcatus S/ANKIS-l ..••••••••••••••••.••..•••••••••••••• 7 Boekelovia sp. S/BOEKE-1 • • • . • • • . • . • • • . • • • • • • • • • • . • . • • • • . • • • • . • . • 12 Botryococcus braunii S/BOTR Y-1 •.•.••••••••••••••••••••••••••••..•••••• 17 Chaetoceros gracilis Schutt S/CHAET-1 •• • • • • • • • • • • • . • • • . • • • • • • • • • • • • • 21 Chaetoceros sp. S/CHAET-2 ••. ••••••••.••••••.••••.....•.••••.•••••..•• -
Permian–Triassic Non-Marine Algae of Gondwana—Distributions
Earth-Science Reviews 212 (2021) 103382 Contents lists available at ScienceDirect Earth-Science Reviews journal homepage: www.elsevier.com/locate/earscirev Review Article Permian–Triassic non-marine algae of Gondwana—Distributions, natural T affinities and ecological implications ⁎ Chris Maysa,b, , Vivi Vajdaa, Stephen McLoughlina a Swedish Museum of Natural History, Box 50007, SE-104 05 Stockholm, Sweden b Monash University, School of Earth, Atmosphere and Environment, 9 Rainforest Walk, Clayton, VIC 3800, Australia ARTICLE INFO ABSTRACT Keywords: The abundance, diversity and extinction of non-marine algae are controlled by changes in the physical and Permian–Triassic chemical environment and community structure of continental ecosystems. We review a range of non-marine algae algae commonly found within the Permian and Triassic strata of Gondwana and highlight and discuss the non- mass extinctions marine algal abundance anomalies recorded in the immediate aftermath of the end-Permian extinction interval Gondwana (EPE; 252 Ma). We further review and contrast the marine and continental algal records of the global biotic freshwater ecology crises within the Permian–Triassic interval. Specifically, we provide a case study of 17 species (in 13 genera) palaeobiogeography from the succession spanning the EPE in the Sydney Basin, eastern Australia. The affinities and ecological im- plications of these fossil-genera are summarised, and their global Permian–Triassic palaeogeographic and stra- tigraphic distributions are collated. Most of these fossil taxa have close extant algal relatives that are most common in freshwater, brackish or terrestrial conditions, and all have recognizable affinities to groups known to produce chemically stable biopolymers that favour their preservation over long geological intervals. -
Lateral Gene Transfer of Anion-Conducting Channelrhodopsins Between Green Algae and Giant Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.04.15.042127; this version posted April 23, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 5 Lateral gene transfer of anion-conducting channelrhodopsins between green algae and giant viruses Andrey Rozenberg 1,5, Johannes Oppermann 2,5, Jonas Wietek 2,3, Rodrigo Gaston Fernandez Lahore 2, Ruth-Anne Sandaa 4, Gunnar Bratbak 4, Peter Hegemann 2,6, and Oded 10 Béjà 1,6 1Faculty of Biology, Technion - Israel Institute of Technology, Haifa 32000, Israel. 2Institute for Biology, Experimental Biophysics, Humboldt-Universität zu Berlin, Invalidenstraße 42, Berlin 10115, Germany. 3Present address: Department of Neurobiology, Weizmann 15 Institute of Science, Rehovot 7610001, Israel. 4Department of Biological Sciences, University of Bergen, N-5020 Bergen, Norway. 5These authors contributed equally: Andrey Rozenberg, Johannes Oppermann. 6These authors jointly supervised this work: Peter Hegemann, Oded Béjà. e-mail: [email protected] ; [email protected] 20 ABSTRACT Channelrhodopsins (ChRs) are algal light-gated ion channels widely used as optogenetic tools for manipulating neuronal activity 1,2. Four ChR families are currently known. Green algal 3–5 and cryptophyte 6 cation-conducting ChRs (CCRs), cryptophyte anion-conducting ChRs (ACRs) 7, and the MerMAID ChRs 8. Here we 25 report the discovery of a new family of phylogenetically distinct ChRs encoded by marine giant viruses and acquired from their unicellular green algal prasinophyte hosts. -
New Phylogenetic Hypotheses for the Core Chlorophyta Based on Chloroplast Sequence Data
ORIGINAL RESEARCH ARTICLE published: 17 October 2014 ECOLOGY AND EVOLUTION doi: 10.3389/fevo.2014.00063 New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data Karolina Fucíkovᡠ1, Frederik Leliaert 2,3, Endymion D. Cooper 4, Pavel Škaloud 5, Sofie D’Hondt 2, Olivier De Clerck 2, Carlos F. D. Gurgel 6, Louise A. Lewis 1, Paul O. Lewis 1, Juan M. Lopez-Bautista 3, Charles F. Delwiche 4 and Heroen Verbruggen 7* 1 Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA 2 Phycology Research Group, Biology Department, Ghent University, Ghent, Belgium 3 Department of Biological Sciences, The University of Alabama, Tuscaloosa, AL, USA 4 Department of Cell Biology and Molecular Genetics and the Maryland Agricultural Experiment Station, University of Maryland, College Park, MD, USA 5 Department of Botany, Faculty of Science, Charles University in Prague, Prague, Czech Republic 6 School of Earth and Environmental Sciences, The University of Adelaide, Adelaide, SA, Australia 7 School of Botany, University of Melbourne, Melbourne, VIC, Australia Edited by: Phylogenetic relationships in the green algal phylum Chlorophyta have long been subject to Debashish Bhattacharya, Rutgers, debate, especially at higher taxonomic ranks (order, class). The relationships among three The State University of New Jersey, traditionally defined and well-studied classes, Chlorophyceae, Trebouxiophyceae, and USA Ulvophyceae are of particular interest, as these groups are species-rich and ecologically Reviewed by: Jinling Huang, East Carolina important worldwide. Different phylogenetic hypotheses have been proposed over the University, USA past two decades and the monophyly of the individual classes has been disputed on Cheong Xin Chan, The University of occasion. -
Chlorophyta, Chlorococcales, Oocystaceae) Outside East Asia
Fottea 10(1): 141–144, 2010 141 First report of Makinoella tosaensis OKADA (Chlorophyta, Chlorococcales, Oocystaceae) outside East Asia František HINDÁK & Alica HINDÁKOVÁ Institute of Botany, Slovak Academy of Sciences, Dúbravská cesta 9, SK–84523 Bratislava, Slovakia; e–mail: [email protected], [email protected] Abstract: The morphology of Makinoella tosaensis Okada 1949, a chlorococcalean coenobial alga described from Japan and since then observed only in Korea, has been studied under the LM from field material and in laboratory cultures. Its collection from a small fountain in the campus park of the Slovak Academy of Sciences in Bratislava, Slovakia, is the first record outside East Asia. The morphology of coenobia and cells in this material is in agreement with published data of the species. Key words: Chlorococcales, coenobial green algae, morphology, taxonomy, Slovakia Introduction & FOTT 1983). Outside of Japan (cf. http:// protist.i.hosei.ac.jp/PDB/Images/chlorophyta/ In the algal flora of Slovakia project, special Makinoella/index.html), it was observed only in attention was paid to small artificial water bodies Korea (he g e w a l d et al. 1999). The strain SAG such as urban fountains. The diversity of algae 28.97, isolated by Hegewald from Korea, is kept was investigated in several fountains within the at the Algal Collection in Göttingen, Germany. city limits of Bratislava (HINDÁK 1977, 1980 a, b, The ultrastructure of this culture was investigated 1984, 1988, 1990, 1996; HINDÁK & HINDÁKOVÁ in detail by sc h n e p f & he g e w a l d (2000). This 1994, 1998; HINDÁKOVÁ & HINDÁK 1998), strain was also used for molecular analyses and including a small basin located at the campus compared with some other representatives of the of the Slovak Academy of Sciences (SAS) at Oocystaceae (he p p e r l e et al. -
Phylogenetic Position of Ecballocystis and Ecballocystopsis (Chlorophyta)
Fottea, Olomouc, 13(1): 65–75, 2013 65 Phylogenetic position of Ecballocystis and Ecballocystopsis (Chlorophyta) Shuang XIA1, 2, Huan ZHU1, 2 Ying–Yin CHENG1, Guo–Xiang LIU1* & Zheng–Yu HU1 1Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China; *Corresponding author e–mail: [email protected] 2University of Chinese Academy of Sciences, Beijing 100039, P. R. China Abstract: Ecballocystis and Ecballocystopsis are two rare, green algal genera. Both have thalli that grow on rock surfaces in flowing water and attach to rocks by a thick mucilaginous pad. The algae have similar thalli structure, consisting of autospores in mother cell wall remnants. Ecballocystopsis differs from Ecballocystis in being filamentous instead of dendroid. In this study, new strains of Ecballocystis hubeiensis and Ecballocystopsis dichotomus were collected from China and cultured. Morphology was observed by light and electron microscopy. 18S rDNA and rbcL sequences were determined and subjected to phylogenetic analysis. Both morphological and phylogenetic analysis indicated that Ecballocystis and Ecballocystopsis should be placed in the family of Oocystaceae. Ecballocystis was closely related to Elongatocystis in 18S rDNA phylogeny. The results of present study emphasize the high level of phenotypic plasticity of Oocystaceae. Within the family, cell arrangement can be solitary, colonial, dendroid, or filamentous. Key words: Ecballocystis, Ecballocystopsis, phylogeny, 18S rDNA, rbcL, Oocystaceae Introduction the species from other members of Ecballocystis (LIU & HU 2005). Ecballocystis BOHLIN and Ecballocystopsis The genus Ecballocystopsis was esta- IYENGAR are two rare green algal genera. Both blished by IYENGAR (1933) with the type species algae grow on the wet surfaces of substrata. -
Mychonastes Frigidus Sp. Nov. (Sphaeropleales/Chlorophyceae), a New Species Described from a Mountain Stream in the Subpolar Urals (Russia)
8 Fottea, Olomouc, 21(1): 8–15, 2021 DOI: 10.5507/fot.2020.012 Mychonastes frigidus sp. nov. (Sphaeropleales/Chlorophyceae), a new species described from a mountain stream in the Subpolar Urals (Russia) Elena Patova 1*, Irina Novakovskaya1, Nikita Martynenko2, Evgeniy Gusev2 & Maxim Kulikovskiy2 1Institute of Biology FRC Komi SC UB RAS, Kommunisticheskaya Street 28, Syktyvkar, 167982, Russia; *Corresponding authore–mail: [email protected] 2К.А. Timiryazev Institute of Plant Physiology RAS, Botanicheskaya Street 35, Moscow, 127276 Russia Abstract: This paper describes a new species from the Class Chlorophyceae, Mychonastes frigidus sp. nov., isolated from a cold–water mountain stream in the north of Russia (Subpolar Ural). The taxon is described us- ing morphological and molecular methods. Mychonastes frigidus sp. nov. belongs to the group of species of the genus Mychonastes with spherical single cells. Comparison of ITS2 rDNA sequences and its secondary structures combined with the compensatory base changes approach confirms the separation betweenMychonastes frigidus sp. nov and other species of the genus. Mychonastes frigidus sp. nov. represents a cryptic species that can only be reliably identified using molecular data. Key words: Mychonastes, new species, SSU rDNA, ITS2 rDNA secondary structure, CBC approach, Subpolar Urals Introduction repeatedly noted in terrestrial habitats in the northern regions of the Urals (Patova & Novakovskaya 2018). The genus Mychonastes P.D. Simpson & Van Valkenburg The Subpolar Urals comprises the northernmost part of 1978 comprises autosporic small–celled organisms that the Ural Mountains in Russia. It is the highest part of live alone, in small groups or organized in colonies, the Ural mountain system, which is a complex folded surrounded by hyaline, mucilaginous envelopes without structure of the Upper Paleozoic age. -
Nuevas Citas De Algas Verdes Cocales En La Península Ibérica New Records of Coccal Green Algae in the Iberian Peninsula
Bol. R. Soc. Esp. Hist. Nat. Sec. Biol., 104, 2010, 5-24. ISSN: 0366-3272 Nuevas citas de algas verdes Cocales en la Península Ibérica New records of Coccal green algae in the Iberian Peninsula Ingrid Fanés Treviño1, Pedro M. Sánchez Castillo1 y Augusto Comas González2 1. Departamento de Botánica, Facultad de Ciencias, Universidad de Granada. 18071 Granada. [email protected] 2. Centro de Esudios Ambientales de Cienfuegos, CITMA, Reparto Reina, Cienfuegos. 55100 Cuba. Palabras clave: Andalucía, Chlorophyceae, Taxonomía, Trebouxiophyceae, Península Ibérica, España Key words: Andalusia, Chlorophyceae, Taxonomy, Trebouxiophyceae, Iberian Peninsula, Spain Resumen La taxonomía del grupo de las algas verdes cocales se encuentra en la actualidad en un periodo de transición. La sistemática tradicional basada en caracteres morfológicos ha dado paso a una sistemática molecular que se halla aún en sus inicios. En España este grupo de algas no ha sido estudiado a nivel monográfico, únicamente se citan sus especies en algunos catálogos generales o en trabajos de tipo limnológico. En este trabajo se presenta un catálogo de algunas especies de algas verdes cocales recolectadas en lagunas, balsas y embalses del sur de España durante los años 2004 a 2006. Se incluyen un total de 47 especies, de las cuales 13 se citan por primera vez en la Península Ibérica (Botryococcus cf. protuberans, Botryococcus terribilis, Chlorella minutissima, Desmodesmus grahneisii, Dicellula geminata, Dichotomococcus curvatus, Dictyosphaerium elongatum, Follicularia sp., Franceia ovalis, Lobocystis inconspicua, Paradoxia multiseta, Tetrachlorella ornata, Willea cf. vilhelmii), tres son nuevas citas para España (Kirchneriella rotunda, Crucigenia mucronata, Treubaria schmidlei), 27 lo son para Andalucía y 8 para Extremadura. -
Distinctive Architecture of the Chloroplast Genome in The
Manuscript Click here to download Manuscript Turmel_etal_revMS_clean.docx 1 2 Distinctive Architecture of the Chloroplast Genome in the 3 Chlorodendrophycean Green Algae Scherffelia dubia and 4 Tetraselmis sp. CCMP 881 5 6 7 Monique Turmel*, Jean-Charles de Cambiaire, Christian Otis and Claude Lemieux 8 9 10 Institut de Biologie Intégrative et des Systèmes, Département de biochimie, de 11 microbiologie et de bio-informatique, Université Laval, Québec, Québec, Canada 12 13 14 15 * Corresponding author 16 E-mail: [email protected] (MT) 17 2 18 Abstract 19 The Chlorodendrophyceae is a small class of green algae belonging to the core Chlorophyta, an 20 assemblage that also comprises the Pedinophyceae, Trebouxiophyceae, Ulvophyceae and 21 Chlorophyceae. Here we describe for the first time the chloroplast genomes of 22 chlorodendrophycean algae (Scherffelia dubia, 137,161 bp; Tetraselmis sp. CCMP 881, 100,264 23 bp). Characterized by a very small single-copy (SSC) region devoid of any gene and an 24 unusually large inverted repeat (IR), the quadripartite structures of the Scherffelia and 25 Tetraselmis genomes are unique among all core chlorophytes examined thus far. The lack of 26 genes in the SSC region is offset by the rich and atypical gene complement of the IR, which 27 includes genes from the SSC and large single-copy regions of prasinophyte and streptophyte 28 chloroplast genomes having retained an ancestral quadripartite structure. Remarkably, seven of 29 the atypical IR-encoded genes have also been observed in the IRs of pedinophycean and 30 trebouxiophycean chloroplast genomes, suggesting that they were already present in the IR of the 31 common ancestor of all core chlorophytes. -
Università Di Bologna Facoltà Di Scienze Matematiche Fisiche E
Alma Mater Studiorum – Università di Bologna Facoltà di Scienze Matematiche Fisiche e Naturali DOTTORATO DI RICERCA IN Scienze Ambientali: tutela e gestione delle risorse naturali Ciclo XXIV 05/A1 - Botanica BIO/01 - Botanica Generale Algal wastewater treatment and biomass producing potential: nutrient removal efficiency and cell physiological responses Presentata da: Giulia Samorì Coordinatore Dottorato Relatore Prof. Enrico Dinelli Prof.ssa Rossella Pistocchi Esame finale anno 2012 2 Table of contents 1. AIM OF THE THESIS .................................................................................................. 7 2. BACKGROUND ............................................................................................................ 8 2.1 WASTEWATER TREATMENT METHODS AND MICROALGAE APPLICATION ...................... 8 2.1.1 Conventional Biological Treatment..................................................................... 9 2.1.2 Natural biological treatment and the depuration role of microalgae ............... 12 2.2 TECHNOLOGIES FOR MICROALGAE BIOMASS PRODUCTION ......................................... 15 2.2.1 Open ponds ........................................................................................................ 16 2.2.2 Closed photobioreactors.................................................................................... 19 2.3 ALGAE BIOFUELS ....................................................................................................... 21 2.3.1 Algae biofuels: a brief history ..........................................................................