Reservoir Host Immune Responses to Emerging Zoonotic Viruses
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COVID-19: Perspective, Patterns and Evolving Strategies
COVID-19: Perspective, Patterns and Evolving strategies Subject Category: Clinical Virology Vinod Nikhra* Department of Medicine, Hindu Rao Hospital & NDMC Medical College, New Delhi, India Submitted: 02 June 2020 | Approved: 06 July 2020 | Published: 09 July 2020 Copyright: © 2020 Nikhra V. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. DOI: https://dx.doi.org/10.29328/ebook1003 ORCID: https://orcid.org/0000-0003-0859-5232 *Corresponding author: Dr. Vinod Nikhra, M.D. Consultant and Faculty, Department of Medicine, Hindu Rao Hospital & NDMC Medical College, New Delhi, India, Tel: 91-9810874937; Email: [email protected]; drvinodnikhra@rediff mail.com Open Access COVID-19: Perspective, Patterns and Evolving strategies Table of Contents - 7 Chapters Sl No Chapters Title Pages The Trans-Zoonotic Virome Interface: Measures to 1 Chapter 1 003-011 Balance, Control and Treat Epidemics Exploring Pathophysiology of COVID-19 Infection: Faux 2 Chapter 2 012-020 Espoir and Dormant Therapeutic Options The Agent and Host Factors in COVID-19: Exploring 3 Chapter 3 021-036 Pathogenesis and Therapeutic Implications Adverse Outcomes for Elderly in COVID-19: Annihilation 4 Chapter 4 037-047 of the Longevity Dream Identifying Patterns in COVID-19: Morbidity, Recovery, 5 Chapter 5 048-058 and the Aftermath The New Revelations: Little-known Facts about COVID-19 6 Chapter 6 059-068 and their Implications Fear, Reaction and Rational Behaviour to COVID-19 in 7 Chapter 7 069-076 Public, Health Professionals and Policy Planners La Confusion: Caring for COVID-19 patients 8 Postscript 077-079 and the raging, engulfi ng and debilitating pandemic 9 Acknowledgement 080-080 *Corresponding HTTPS://WWW.HEIGHPUBS.ORG author: Dr. -
Assembling Evidence for Identifying Reservoirs of Infection
TREE-1806; No. of Pages 10 Review Assembling evidence for identifying reservoirs of infection 1 1,2 1,3 1 4 Mafalda Viana , Rebecca Mancy , Roman Biek , Sarah Cleaveland , Paul C. Cross , 3,5 1 James O. Lloyd-Smith , and Daniel T. Haydon 1 Boyd Orr Centre for Population and Ecosystem Health, Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK 2 School of Computing Science, University of Glasgow, Glasgow G12 8QQ, UK 3 Fogarty International Center, National Institutes of Health, Bethesda, MD 20892, USA 4 US Geological Survey, Northern Rocky Mountain Science Center 2327, University Way, Suite 2, Bozeman, MT 59715, USA 5 Department of Ecology and Evolutionary Biology, University of California at Los Angeles, Los Angeles, CA 90095, USA Many pathogens persist in multihost systems, making patterns of incidence and prevalence (see Glossary) that the identification of infection reservoirs crucial for result from the connectivity between source and target devising effective interventions. Here, we present a con- populations (black arrows in Figure I in Box 1). We then ceptual framework for classifying patterns of incidence review methods that allow us to identify maintenance or and prevalence, and review recent scientific advances nonmaintenance populations (squares or circles in Figure that allow us to study and manage reservoirs simulta- I, Box 1), how they are connected (arrows in Figure I, Box neously. We argue that interventions can have a crucial 1), and the role that each of these populations has in role in enriching our mechanistic understanding of how maintaining the pathogen (i.e., reservoir capacity). -
Presentation
COMPLETE HEMORRHAGIC FEVER VIRUS INACTIVATION DURING LYSIS IN THE FILMARRAY BIOTHREAT-E ASSAY DEMONSTRATES THE BIOSAFETY OF THIS TEST. Olivier Ferraris (3), Françoise Gay-Andrieu (1), Marie Moroso (2), Fanny Jarjaval (3), Mark Miller (1), Christophe N. Peyrefitte (3) (1) bioMérieux, Marcy l’Etoile, France, (2) Fondation Mérieux, France (3) Unité de Virologie, Institut de recherche biomédicale des armées, Brétigny sur Orge, France Background : Viral hemorrhagic fevers (VHFs) are a group of illnesses caused by mainly five families of viruses namely Arenaviridae, Filoviridae , Bunyaviridae (Orthonairovirus genus ), Flaviviruses and Paramyxovirus (Henipavirus genus). The filovirus species known to cause disease in humans, Ebola virus (Zaire Ebolavirus), Sudan virus (Sudan Ebolavirus), Tai Forest virus (Tai Forest Ebolavirus), Bundibugyo virus (Bundibugyo Ebolavirus), and Marburg virus are restricted to Central Africa for 35 years, and spread to Guinea, Liberia, Sierra Leone in early 2014. Lassa fever is responsible for disease outbreaks across West Africa and in Southern Africa in 2008, with the identification of novel world arenavirus (Lujo virus). Henipavirus spread South Asia to Australia. CCHFv spread asia to south europa. They are transmitted from host reservoir by direct contacts or through vectors such as ticks bits. Working with VHF viruses, need a Biosafety Level 4 (BSL-4) laboratory, however during epidemics such observed with Ebola virus in 2014, the need to diagnose rapidly the patients raised the necessity to develop local laboratories These viruses represents a threat to healthcare workers and researches who manage infected diagnostic samples in laboratories. Aim : 1 Inactivation step An FilmArray Bio Thereat-E assay for detection of Hemorrhagic fever viruse Interfering substance HF virus + FA Lysis Buffer such as Ebola virus was developed to respond to Hemorrhagic fever virus 106 Ebola virus Whole blood + outbreak. -
Variation in Antimicrobial Susceptibility Among Borrelia Burgdorferi Strains? Emir Hodzic*
BOSNIAN JOURNAL OF BASIC MEDICAL SCIENCES REVIEW WWW.BJBMS.ORG Lyme Borreliosis: is there a preexisting (natural) variation in antimicrobial susceptibility among Borrelia burgdorferi strains? Emir Hodzic* Real-Time PCR Research and Diagnostic Core Facility, School of Veterinary Medicine, University of California at Davis, California, United States of America ABSTRACT The development of antibiotics changed the world of medicine and has saved countless human and animal lives. Bacterial resistance/tolerance to antibiotics have spread silently across the world and has emerged as a major public health concern. The recent emergence of pan-resistant bacteria can overcome virtually any antibiotic and poses a major problem for their successful control. Selection for antibiotic resistance may take place where an antibiotic is present: in the skin, gut, and other tissues of humans and animals and in the environment. Borrelia burgdorferi, the etiological agents of Lyme borreliosis, evades host immunity and establishes persistent infections in its mammalian hosts. The persistent infection poses a challenge to the effective antibiotic treatment, as demonstrated in various animal models. An increasingly heterogeneous sub- population of replicatively attenuated spirochetes arises following treatment, and these persistent antimicrobial tolerant/resistant spirochetes are non-cultivable. The non-cultivable spirochetes resurge in multiple tissues at 12 months after treatment, withB. burgdorferi-specific DNA copy levels nearly equivalent to those found in shame-treated experimental animals. These attenuated spirochetes remain viable, but divide slowly, thereby being tolerant to antibiotics. Despite the continued non-cultivable state, RNA transcription of multiple B. burgdorferi genes was detected in host tissues, spirochetes were acquired by xenodiagnostic ticks, and spirochetal forms could be visualized within ticks and mouse tissues. -
Impact of Babesia Microti Infection on the Initiation and Course Of
Tołkacz et al. Parasites Vectors (2021) 14:132 https://doi.org/10.1186/s13071-021-04638-0 Parasites & Vectors RESEARCH Open Access Impact of Babesia microti infection on the initiation and course of pregnancy in BALB/c mice Katarzyna Tołkacz1,2*, Anna Rodo3, Agnieszka Wdowiarska4, Anna Bajer1† and Małgorzata Bednarska5† Abstract Background: Protozoa in the genus Babesia are transmitted to humans through tick bites and cause babesiosis, a malaria-like illness. Vertical transmission of Babesia spp. has been reported in mammals; however, the exact timing and mechanisms involved are not currently known. The aims of this study were to evaluate the success of vertical transmission of B. microti in female mice infected before pregnancy (mated during the acute or chronic phases of Babesia infection) and that of pregnant mice infected during early and advanced pregnancy; to evaluate the pos- sible infuence of pregnancy on the course of parasite infections (parasitaemia); and to assess pathological changes induced by parasitic infection. Methods: The frst set of experiments involved two groups of female mice infected with B. microti before mating, and inseminated on the 7th day and after the 40th day post infection. A second set of experiments involved female mice infected with B. microti during pregnancy, on the 4th and 12th days of pregnancy. Blood smears and PCR targeting the 559 bp 18S rRNA gene fragment were used for the detection of B. microti. Pathology was assessed histologically. Results: Successful development of pregnancy was recorded only in females mated during the chronic phase of infection. The success of vertical transmission of B. -
Nipah Virus (Niv)
Nipah Virus (NiV) Nipah virus (NiV) is a member of the family Paramyxoviridae, genus Henipavirus. NiV was initially isolated and identified in 1999 during an outbreak of encephalitis and respiratory illness among pig farmers and people with close contact with pigs in Malaysia and Singapore. Its name originated from Sungai Nipah, a village in the Malaysian Peninsula where pig farmers became ill with encephalitis. Given the relatedness of NiV to Hendra virus, bat species were quickly singled out for investigation and flying foxes of the genus Pteropus were subsequently identified as the reservoir for NiV (Distribution Map). In the 1999 outbreak, Nipah virus caused a relatively mild disease in pigs, but nearly 300 human cases with over 100 deaths were reported. In order to stop the outbreak, more than a million pigs were euthanized, causing tremendous trade loss for Malaysia. Since this outbreak, no subsequent cases (in neither swine nor human) have been reported in either Malaysia or Singapore. In 2001, NiV was again identified as the causative agent in an outbreak of human disease occurring in Bangladesh. Genetic sequencing confirmed this virus as Nipah virus, but a strain different from the one identified in 1999. In the same year, another outbreak was identified retrospectively in Siliguri, India with reports of person-to-person transmission in hospital settings (nosocomial transmission). Unlike the Malaysian NiV outbreak, outbreaks occur almost annually in Bangladesh and have been reported several times in India. Transmission Transmission of Nipah virus to humans may occur after direct contact with infected bats, infected pigs, or from other NiV infected people. -
MODELING the SPREAD of the 1918 INFLUENZA PANDEMIC in a NEWFOUNDLAND COMMUNITY a Dissertation Presented to the Faculty of the Gr
MODELING THE SPREAD OF THE 1918 INFLUENZA PANDEMIC IN A NEWFOUNDLAND COMMUNITY A Dissertation presented to the Faculty of the Graduate School at the University of Missouri In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy By JESSICA LEA DIMKA Dr. Lisa Sattenspiel, Dissertation Supervisor MAY 2015 The undersigned, appointed by the dean of the Graduate School, have examined the dissertation entitled MODELING THE SPREAD OF THE 1918 INFLUENZA PANDEMIC IN A NEWFOUNDLAND COMMUNITY Presented by Jessica Lea Dimka A candidate for the degree of Doctor of Philosophy And hereby certify that, in their opinion, it is worthy of acceptance. Professor Lisa Sattenspiel Professor Gregory Blomquist Professor Mary Shenk Professor Enid Schatz ACKNOWLEDGEMENTS This research could not have been completed without the support and guidance of many people who deserve recognition. Dr. Lisa Sattenspiel provided the largest amount of assistance and insight into this project, from initial development through model creation and data analysis to the composition of this manuscript. She has been an excellent mentor over the last seven years. I would also like to extend my gratitude to my committee members – Dr. Greg Blomquist, Dr. Mary Shenk, and Dr. Enid Schatz – for their advice, comments, patience and time. I also would like to thank Dr. Craig Palmer for his insight and support on this project. Additionally, I am grateful to Dr. Allison Kabel, who has provided me with valuable experience, advice and support in my research and education activities while at MU. Many thanks go to the librarians and staff of the Provincial Archives of Newfoundland and Labrador and the Centre for Newfoundland Studies at Memorial University of Newfoundland. -
Temporal and Spatial Limitations in Global Surveillance for Bat Filoviruses and Henipaviruses: Online Appendix Daniel J. Becker
Temporal and spatial limitations in global surveillance for bat filoviruses and henipaviruses: Online Appendix Daniel J. Becker, Daniel E. Crowley, Alex D. Washburne, Raina K. Plowright S1. Systematic search S2. Full reference list S3. Bat phylogeny S4. Post-hoc sampling design analysis S1. Systematic search Figure S1. The data collection and inclusion process for studies of wild bat filovirus and henipavirus prevalence and seroprevalence (PRISMA diagram). Searches used the following string: (bat* OR Chiroptera*) AND (filovirus OR henipavirus OR "Hendra virus" OR "Nipah virus" OR "Ebola virus" OR "Marburg virus" OR ebolavirus OR marburgvirus). Searches were run during October 2017. Publications were excluded if they did not assess filovirus or henipavirus prevalence or seroprevalence in wild bats or were in languages other than English. Records identified with Web of Science, CAB Abstracts, and PubMed (n = 1275) Identification Records after duplicates removed (n = 995) Screening Records screened Records excluded (n = 995) (n = 679) Full-text articles excluded for Full-text articles irrelevance, bats in assessed for eligibility captivity, other bat (n = 316) virus, not filovirus or henipavirus prevalence or Eligibility seroprevalence, not virus in bats (n = 260) Studies included in qualitative synthesis (n = 56) Studies included in Included quantitative synthesis (n = 56; n = 48 for the phylogenetic meta- analysis) S2. Full reference list 1. Amman, Brian R., et al. "Seasonal pulses of Marburg virus circulation in juvenile Rousettus aegyptiacus bats coincide with periods of increased risk of human infection." PLoS Pathogens 8.10 (2012): e1002877. 2. de Araujo, Jansen, et al. "Antibodies against Henipa-like viruses in Brazilian bats." Vector- Borne and Zoonotic Diseases 17.4 (2017): 271-274. -
Prediction and Prevention of the Next Pandemic Zoonosis
Series Zoonoses 3 Prediction and prevention of the next pandemic zoonosis Stephen S Morse, Jonna A K Mazet, Mark Woolhouse, Colin R Parrish, Dennis Carroll, William B Karesh, Carlos Zambrana-Torrelio, W Ian Lipkin, Peter Daszak Lancet 2012; 380: 1956–65 Most pandemics—eg, HIV/AIDS, severe acute respiratory syndrome, pandemic infl uenza—originate in animals, See Comment pages 1883 are caused by viruses, and are driven to emerge by ecological, behavioural, or socioeconomic changes. Despite their and 1884 substantial eff ects on global public health and growing understanding of the process by which they emerge, no This is the third in a Series of pandemic has been predicted before infecting human beings. We review what is known about the pathogens that three papers about zoonoses emerge, the hosts that they originate in, and the factors that drive their emergence. We discuss challenges to their Mailman School of Public control and new eff orts to predict pandemics, target surveillance to the most crucial interfaces, and identify Health (Prof S S Morse PhD), and Center for Infection and prevention strategies. New mathematical modelling, diagnostic, communications, and informatics technologies can Immunity (Prof W I Lipkin MD); identify and report hitherto unknown microbes in other species, and thus new risk assessment approaches are Columbia University, needed to identify microbes most likely to cause human disease. We lay out a series of research and surveillance New York, NY, USA; One Health opportunities and goals that could help to overcome these challenges and move the global pandemic strategy from Institute, School of Veterinary Medicine, University of response to pre-emption. -
Bats Are a Major Natural Reservoir for Hepaciviruses and Pegiviruses
Bats are a major natural reservoir for hepaciviruses and pegiviruses Phenix-Lan Quana,1, Cadhla Firtha, Juliette M. Contea, Simon H. Williamsa, Carlos M. Zambrana-Torreliob, Simon J. Anthonya,b, James A. Ellisonc, Amy T. Gilbertc, Ivan V. Kuzminc,2, Michael Niezgodac, Modupe O. V. Osinubic, Sergio Recuencoc, Wanda Markotterd, Robert F. Breimane, Lems Kalembaf, Jean Malekanif, Kim A. Lindbladeg, Melinda K. Rostalb, Rafael Ojeda-Floresh, Gerardo Suzanh, Lora B. Davisi, Dianna M. Blauj, Albert B. Ogunkoyak, Danilo A. Alvarez Castillol, David Moranl, Sali Ngamm, Dudu Akaiben, Bernard Agwandao, Thomas Briesea, Jonathan H. Epsteinb, Peter Daszakb, Charles E. Rupprechtc,3, Edward C. Holmesp, and W. Ian Lipkina aCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, NY 10032; bEcoHealth Alliance, New York, NY 10001; cPoxvirus and Rabies Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30333; dDepartment of Microbiology and Plant Pathology, University of Pretoria, Pretoria 0002, South Africa; eCenters for Disease Control and Prevention in Kenya, Nairobi, Kenya; fUniversity of Kinshasa, Kinshasa 11, Democratic Republic of the Congo; gCenters for Disease Control and Prevention Guatemala, 01015, Guatemala City, Guatemala; hFacultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autónoma de México, Ciudad Universitaria, 04510 México D. F., Mexico; iCenters for Disease Control and Prevention Nigeria, Abuja, Nigeria; jInfectious Diseases Pathology Branch, Division of High-Consequence Pathogens and Pathology, National Center for Emerging Zoonotic Infectious Diseases, Centers for Disease Control and Prevention, Atlanta, GA 30333; kDepartment of Veterinary Medicine, Ahmadu Bello University, Samaru, Zaria, Kaduna State, Nigeria; lCenter for Health Studies, Universidad del Valle de Guatemala, 01015, Guatemala City, Guatemala; mLaboratoire National Vétérinaire, B.P. -
Emerging Viral Infections
REVIEW CURRENT OPINION Emerging viral infections Michael R. Wilson Purpose of review This review highlights research and development in the field of emerging viral causes of encephalitis over the past year. Recent findings There is new evidence for the presence of henipaviruses in African bats. There have also been promising advances in vaccine and neutralizing antibody research against Hendra and Nipah viruses. West Nile virus continues to cause large outbreaks in the United States, and long-term sequelae of the virus are increasingly appreciated. There is exciting new research regarding the variable susceptibility of different brain regions to neurotropic virus infection. Another cluster of solid organ transplant recipients developed encephalitis from organ donor-acquired lymphocytic choriomeningitis virus. The global epidemiology of Japanese encephalitis virus has been further clarified. Evidence continues to accumulate for the central nervous system involvement of dengue virus, and the recent deadly outbreak of enterovirus 71 in Cambodian children is discussed. Summary In response to complex ecological and societal dynamics, the worldwide epidemiology of viral encephalitis continues to evolve in surprising ways. The articles highlighted here include new research on virus epidemiology and spread, new outbreaks as well as progress in the development of vaccines and therapeutics. Keywords aseptic meningitis, emerging viral infections, poliomyelitis, viral encephalitis, zoonosis INTRODUCTION mumps virus, lymphocytic choriomeningitis virus In response to complex ecological and societal (LCMV), poliovirus and dengue virus. dynamics, the worldwide epidemiology of viral encephalitis continues to evolve in surprising ways. EMERGING DISEASE VS. EMERGING These forces operate in a context in which we are DIAGNOSIS? increasingly able to identify novel pathogens because of improved diagnostic techniques and Outside the world of infectious disease, neuro- enhanced surveillance regimes [1&&,2]. -
Hendra Virus and Australian Wildlife Fact Sheet
Hendra virus and Australian wildlife Fact sheet Introductory statement Hendra virus (HeV) causes a potentially fatal disease of horses and humans. HeV emerged in 1994 and cases to date have been limited to Queensland (Qld) and New South Wales (NSW), where annual incidents are now reported. Flying-foxes are the natural reservoir of the virus. Horses are infected directly from flying-foxes or via their urine, body fluids or excretions. All human cases have resulted from direct contact with infected horses. Evidence of infection has been seen in two dogs that were in contact with infected horses. HeV has attracted international interest as one of a group of diseases of humans and domestic animals that has emerged from bats since the 1990s. HeV does not cause evident clinical disease in flying-foxes and direct transmission to humans from bats has not been demonstrated. Ongoing work is required to understand the ecology and factors driving emergence of this disease. Aetiology HeV is a RNA virus belonging to the family Paramyxoviridae, genus Henipavirus. Natural hosts There are four species of flying-fox on mainland Australia: Pteropus alecto black flying-fox Pteropus conspicillatus spectacled flying-fox Pteropus scapulatus little red flying-fox Pteropus poliocephalus grey-headed flying-fox While serologic evidence of HeV infection has been found in all four species (Field 2005), more recent research suggests that two species, the black flying-fox and spectacled flying-fox, are the primary reservoir hosts (Field et al. 2011; Smith et al. 2014; Edson et al. 2015; Goldspink et al. 2015). The impact of HeV infection on flying-fox populations is presumed to be minimal.