Organic & Biomolecular Chemistry
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Investigation of Base-Free Copper-Catalysed Azide–Alkyne Click Cycloadditions (Cuaac) in Natural Deep Eutectic Solvents As Green and Catalytic Reaction Media
Investigation of Base-free Copper-Catalysed Azide–Alkyne Click Cycloadditions (CuAAc) in Natural Deep Eutectic Solvents as Green and Catalytic Reaction Media Salvatore V. Giofrè,1* Matteo Tiecco,2* Angelo Ferlazzo,3 Roberto Romeo,1 Gianluca Ciancaleoni,4 Raimondo Germani2 and Daniela Iannazzo3 1. Dipartimento di Scienze Chimiche, Biologiche, Farmaceutiche ed Ambientali, Università di Messina, Viale Annunziata, I-98168 Messina, Italy. 2. Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, via Elce di Sotto 8, I- 06123 Perugia, Italy. 3. Dipartimento di Ingegneria, Università of Messina, Contrada Di Dio, I-98166 Messina, Italy 4. Dipartimento di Chimica e Chimica Industriale (DCCI), Università di Pisa, Via Giuseppe Moruzzi, 13, I-56124 Pisa, Italy. * Corresponding authors Email addresses: [email protected] (Salvatore V. Giofrè); [email protected] (Matteo Tiecco). ABSTRACT The click cycloaddition reaction of azides and alkynes affording 1,2,3-triazoles is a transformation widely used to obtain relevant products in chemical biology, medicinal chemistry, materials science and other fields. In this work, a set of Natural Deep Eutectic Solvents (NADESs) as “active” reaction media has been investigated in the copper-catalysed azide–alkyne cycloaddition reactions (CuAAc). The use of these green liquids as green and catalytic solvents has shown to improve the reaction effectiveness, giving excellent yields. The NADESs proved to be “active” in this transformation for the absence of added bases in all the performed reactions and in several cases for their reducing capabilities. The results were rationalized by DFT calculations which demonstrated the involvement of H-bonds between DESs and alkynes as well as a stabilization of copper catalytic intermediates. -
Synthesis and Characterization of Oligothiophene - Based Fully Π-Conjugated Macrocycles
Synthesis and Characterization of Oligothiophene - based Fully π-Conjugated Macrocycles Dissertation zur Erlangung des Doktorgrades Dr. rer. nat. der Fakultät der Naturwissenschaften der Universität Ulm vorgelegt von Gerda Laura Fuhrmann aus Neustadt (Baia Mare) Rumänien Ulm, 2006 Amtierender Dekan: Prof. Dr. Klaus-Dieter Spindler 1. Gutachter: Prof. Dr. Peter Bäuerle 2. Gutachter: Prof. Dr. Volkhard Austel Tag der Promotionsprüfung: 15.03.2006 This thesis was elaborated and written between November 1999 and February 2006 at the department of Organic Chemistry II, University of Ulm, Germany. für meine Eltern “The chemist does a mysterious thing when he wants to make a molecule. He sees that it has got a ring, so he mixes this and that, and he takes it, and he fiddles around. And at the end of a difficult process, he usually does succeed in synthesizing what he wants.” There’s a Plenty of Room at the Bottom - R. Feynman Ich möchte mich an dieser Stelle bei all denjenigen bedanken, die mich in den zurückliegenden Jahren begleitet und unterstützt haben und damit zum Gelingen dieser Arbeit beigetragen haben. Mein besonderer Dank gilt: - Herrn Prof. Dr. Peter Bäuerle für die stete Unterstützung und Förderung bei der wissenschaftlichen Gestaltung dieser Arbeit, für sein Interesse und persönliches Engagement, sowie für die mir gewähren Freiräume bei der Bearbeitung des Themas - Frau Dr. Pinar Kilickiran für ihre moralische und inspirative Unterstützung, für ihre unermüdliche Hilfe, für die Durchsicht und sprachliche Überarbeitung des Manuskripts und für vieles mehr - Herrn Prof. Dr. V. Austel für die stets anregende wissenschaftliche Diskussionen und seine Bereitschaft diese Arbeit zu begutachten - Herrn Dr. -
Chapter 8 - Alkynes: an Introduction to Organic Synthesis
Chapter 8 - Alkynes: An Introduction to Organic Synthesis Draw structures corresponding to each of the following names. 1. ethynylcyclopropane Answer: CCH 2. 3,10-dimethyl-6-sec-butylcyclodecyne Answer: 3. 4-bromo-3,3-dimethyl-1-hexen-5-yne CH3 Br Answer: H 2C CH C CH C C H CH3 4. acetylene Answer: H CCH Provide names for each compound below. CH3 5. CH3C CCHCH2CH2CH3 Answer: 4-methyl-2-heptyne CH 3 6. CCH Answer: 1-ethynyl-2-methylcyclopentane Test Items for McMurry’s Organic Chemistry, Seventh Edition 59 The compound below has been isolated from the safflower plant. Consider its structure to answer the following questions. H H CCCCCCCC H H3C C C C H H C H H 7. What is the molecular formula for this natural product? Answer: C13H10 8. What is the degree of unsaturation for this compound? Answer: We can arrive at the degree of unsaturation for a structure in two ways. Since we know that the degree of unsaturation is the number of rings and/or multiple bonds in a compound, we can simply count them. There are three double bonds (3 degrees) and three triple bonds (six degrees), so the degree of unsaturation is 9. We can verify this by using the molecular formula, C13H10, to calculate a degree of unsaturation. The saturated 13-carbon compound should have the base formula C13H28, so (28 - 10) ÷ 2 = 18 ÷ 2 = 9. 9. Assign E or Z configuration to each of the double bonds in the compound. Answer: H H E CCCCCCCCE H H3C C C C H H C H H 10. -
Hydrogenationn of 4-Octyne Catalyzedd by Pd[(M^W'- (CF3)2C6H3)) Bian](Ma) in THF
UvA-DARE (Digital Academic Repository) Palladium-catalyzed stereoselective hydrogenation of alkynes to (Z)-alkenes in common solvents and supercritical CO2 Kluwer, A.M. Publication date 2004 Link to publication Citation for published version (APA): Kluwer, A. M. (2004). Palladium-catalyzed stereoselective hydrogenation of alkynes to (Z)- alkenes in common solvents and supercritical CO2. General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:04 Oct 2021 5 Kineti5 cc study and Spectroscopic Investigationn of the semi- hydrogenationn of 4-octyne catalyzedd by Pd[(m^w'- (CF3)2C6H3)) bian](ma) in THF 5.11 Introduction Homogeneouss hydrogenation by transition metal complexes has played a key role in the fundamental understandingg of catalytic reactions and has proven to be of great utility in practical applications. -
Strategies for the Synthesis of Ynamides
I. SYNTHESIS OF INDOLINES AND INDOLES VIA INTRAMOLECULAR [4 + 2] CYCLOADDITION OF YNAMIDES AND CONJUGATED ENYNES II. SYNTHESIS OF NITROGEN HETEROCYCLES IN SUPERCRITICAL CARBON DIOXIDE by Joshua Ross Dunetz B. A., Chemistry Haverford College, 2000 SUBMITTED TO THE DEPARTMENT OF CHEMISTRY IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY at the MASSACHUSETTS INSTITUTE OF TECHNOLOGY September 2005 © Massachusetts Institute of Technology, 2005 All rights reserved Signature of Author .................... ·Department of Chemistry September 1, 2005 a( / Certified by ................................... ................................ Rick L. Danheiser Arthur C. Cope Professor of Chemistry, Thesis Supervisor Acceptedby......................... ............................................ I.... 7 Robert W. Field MASSACHUSETSINSTn '.vE I F TrwfhNl erv-v I Chairman, Department Committee on Graduate Students OCT 1 2005 d }cl/CF , LIBRARIES ~ This doctoral thesis has been examined by a committee in the Department of Chemistry as follows: Professor Timothy F. Jamison . ... Chairman Professor Rick L. Danheiser ........... ... ............................ Thesis Supervisor Professor Barbara Imperiali. ...... ................................................ 2 ACKNOWLEDGMENTS All acknowledgments must begin with my thesis advisor, Rick Danheiser. I first remember meeting him at the Cambridge Brewing Company during recruiting weekend five years ago, and we sat for hours in the restaurant discussing the merits of the 2000 New York Mets and whether one of our favorite baseball teams had a chance to make the playoffs that year. Ultimately, I decided to attend MIT with the hope of joining his group, and during my time in his laboratory Rick has been an excellent mentor and chemistry role model. I continue to be amazed not only by the extent of his knowledge, but also by his ability to articulate chemical principles in an easy and straightforward manner. -
WHO Guidelines for Indoor Air Quality : Selected Pollutants
WHO GUIDELINES FOR INDOOR AIR QUALITY WHO GUIDELINES FOR INDOOR AIR QUALITY: WHO GUIDELINES FOR INDOOR AIR QUALITY: This book presents WHO guidelines for the protection of pub- lic health from risks due to a number of chemicals commonly present in indoor air. The substances considered in this review, i.e. benzene, carbon monoxide, formaldehyde, naphthalene, nitrogen dioxide, polycyclic aromatic hydrocarbons (especially benzo[a]pyrene), radon, trichloroethylene and tetrachloroethyl- ene, have indoor sources, are known in respect of their hazard- ousness to health and are often found indoors in concentrations of health concern. The guidelines are targeted at public health professionals involved in preventing health risks of environmen- SELECTED CHEMICALS SELECTED tal exposures, as well as specialists and authorities involved in the design and use of buildings, indoor materials and products. POLLUTANTS They provide a scientific basis for legally enforceable standards. World Health Organization Regional Offi ce for Europe Scherfi gsvej 8, DK-2100 Copenhagen Ø, Denmark Tel.: +45 39 17 17 17. Fax: +45 39 17 18 18 E-mail: [email protected] Web site: www.euro.who.int WHO guidelines for indoor air quality: selected pollutants The WHO European Centre for Environment and Health, Bonn Office, WHO Regional Office for Europe coordinated the development of these WHO guidelines. Keywords AIR POLLUTION, INDOOR - prevention and control AIR POLLUTANTS - adverse effects ORGANIC CHEMICALS ENVIRONMENTAL EXPOSURE - adverse effects GUIDELINES ISBN 978 92 890 0213 4 Address requests for publications of the WHO Regional Office for Europe to: Publications WHO Regional Office for Europe Scherfigsvej 8 DK-2100 Copenhagen Ø, Denmark Alternatively, complete an online request form for documentation, health information, or for per- mission to quote or translate, on the Regional Office web site (http://www.euro.who.int/pubrequest). -
1-Iodo-1-Pentyne
MIAMI UNIVERSITY-THE GRADUATE SCHOOL CERTIFICATE FOR APPROVING THE DISSERTATION We hereby approve the Dissertation of Lizhi Zhu Candidate for the Degree: Doctor of Philosophy ________________________________ Robert E. Minto, Director ________________________________ John R. Grunwell, Reader ________________________________ John F. Sebastian, Reader ________________________________ Ann E. Hagerman, Reader ________________________________ Richard E. Lee, Graduate School Representative ABSTRACT INVESTIGATING THE BIOSYNTHESIS OF POLYACETYLENES: SYNTHESIS OF DEUTERATED LINOLEIC ACIDS & MECHANISM STUDIES OF DMDS ADDITION TO 1,4-ENYNES By Lizhi Zhu A wide range of polyacetylenic natural products possess antimicrobial, antitumor, and insecticidal properties. The biosyntheses of these natural products are widely distributed among fungi, algae, marine sponges, and higher plants. As details of the biosyntheses of these intriguing compounds remains scarce, it remains important to develop molecular probes and analytical methods to study polyacetylene secondary metabolism. An effective pathway to prepare selectively deuterium-labeled linoleic acids was developed. By this Pd-catalyzed method, deuterium can be easily introduced into the vinyl position providing deuterolinoleates with very high isotopic purity. This method also provides a general route for the construction of 1,4-diene derivatives with different chain lengths and 1,4-diene locations. Linoleic acid derivatives (12-d, 13-d and 16,16,17,17,18,18,18-d7) were synthesized according to this method. A stereoselective synthesis of methyl (14Z)- and (14E)-dehydrocrepenynate was achieved in five to six steps that employed Pd-catalyzed cross-coupling reactions to construct the double bonds between C14 and C15. Compared with earlier methods, the improved syntheses are more convenient (no spinning band distillations or GLC separation of diastereomers were necessary) and higher Z/E ratios were obtained. -
Development of a Solid-Supported Glaser-Hay Reaction and Utilization in Conjunction with Unnatural Amino Acids
W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2015 Development of a Solid-Supported Glaser-Hay Reaction and Utilization in Conjunction with Unnatural Amino Acids Jessica S. Lampkowski College of William & Mary - Arts & Sciences Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Organic Chemistry Commons Recommended Citation Lampkowski, Jessica S., "Development of a Solid-Supported Glaser-Hay Reaction and Utilization in Conjunction with Unnatural Amino Acids" (2015). Dissertations, Theses, and Masters Projects. Paper 1539626985. https://dx.doi.org/doi:10.21220/s2-r9jh-9635 This Thesis is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Development of a Solid-Supported Glaser-Hay Reaction and Utilization in Conjunction with Unnatural Amino Acids Jessica Susan Lampkowski Ida, Michigan B.S. Chemistry, Siena Heights University, 2013 A Thesis presented to the Graduate Faculty of the College of William and Mary in Candidacy for the Degree of Master of Science Chemistry Department The College of William and Mary May, 2015 COMPLIANCE PAGE Research approved by Institutional Biosafety Committee Protocol number: BC-2012-09-13-8113-dyoung01 Date(s) of approval: This protocol will expire on 2015-11-02 APPROVAL PAGE This -
Supporting Information
Electronic Supplementary Material (ESI) for Organic & Biomolecular Chemistry. This journal is © The Royal Society of Chemistry 2014 Supplementary Material Nickel-Catalyzed Substitution Reactions of Propargyl Halides with Organotitanium Reagents Qing-Han Li,a,b,* Jung-Wei Liao,a Yi-Ling Huang,a Ruei-Tang Chianga and Han-Mou Gaua,* a Department of Chemistry, National Chung Hsing University, Taichung 402, Taiwan b College of Chemistry and Environmental Protection Engineering, Southwest University for Nationalities, Chengdu 610041, China e-mail: [email protected] - S1- Table of Contents I. 1H and 13C NMR Spectra of Aryltitanium Reagents S3 1. (2-MeOC6H4)Ti(O-i-Pr)3 (4e) S3 2. (2,6-Me2C6H3)Ti(O-i-Pr)3 (4j) S5 II. 1H and 13C NMR Spectra of Coupling Products S7 1. 1-Phenyl-1,2-propadiene (2aa) S7 2. 1-(4-Methylphenyl)-1,2-propadiene (2ab) S9 3. 1-(2-Methylphenyl)-1,2-propadiene (2ac) S11 4. 1-(4-Methoxyphenyl)-1,2-propadiene (2ad) S13 5. 1-(2-Methoxyphenyl)-1,2-propadiene (2ae) S15 6. 1-(3,5-Dimethylphenyl)-1,2-propadiene (2af) S17 7. 1-(2-Naphthyl)-1,2-propadiene (2ag) S19 8. 1-(4-Trifluoromethylphenyl)-1,2-propadiene (2ah) S21 9. 1-cyclohexyl-1,2-propadiene (2ai) S23 10. 1-(2,6-Dimethylphenyl)-1,2-propadiene (2aj) S25 11. 1-(2,6-Dimethylphenyl)-4-(bromomethyl)-1,2,4-pentatriene (2aj’) S27 12. 3-Phenyl-1,2-pentadiene (2ba) S29 13. 3-(2-Methylphenyl)-1,2-pentadiene (2bc) S31 14. 3-(3,5-Dimethylphenyl)-1,2-pentadiene (2bf) S33 15. 3-(2,6-Dimethylphenyl)-1,2-pentadiene (2bj) S35 16. -
Bioresorbable Stereochemically Defined Polymers for Tissue Engineering and Wireless Bio-Integrated Electronic Device Applications
© 2021 Yen-Hao Hsu ALL RIGHTS RESERVED BIORESORBABLE STEREOCHEMICALLY DEFINED POLYMERS FOR TISSUE ENGINEERING AND WIRELESS BIO-INTEGRATED ELECTRONIC DEVICE APPLICATIONS A Dissertation Presented to The Graduate Faculty of The University of Akron In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Yen-Hao Hsu March, 2021 BIORESORBABLE STEREOCHEMICALLY DEFINED POLYMERS FOR TISSUE ENGINEERING AND WIRELESS BIO-INTEGRATED ELECTRONIC DEVICE APPLICATIONS Yen-Hao Hsu Dissertation Approved: Accepted: _______________________________ ______________________________ Advisor Interim Director of SPSPE Dr. Matthew L. Becker Dr. Ali Dhinojwala _______________________________ ______________________________ Committee Member Interim Dean of the College Dr. Yu Zhu Dr. Craig Menzemer _______________________________ ______________________________ Committee Member Interim Director, Graduate School Dr. Chrys Wesdemiotis Dr. Marnie Saunders _______________________________ ______________________________ Committee Member Date Dr. Xiong Gong _______________________________ Committee Member Dr. Kevin A. Cavicchi iii ABSTRACT In most synthetic bioresorbable polymers, changing the physical properties such as elasticity and toughness by monomers results in a change to the crystallinity of the material, which manifests through alteration of its mechanical performance. “Thiol-yne” click chemistry has been discovered as an efficient methodology for step-growth polymerization between thiols and activated alkynes. Variation of the solvent polarity -
Transformation of Phenanthrene by Mycobacterium Sp. ELW1 and the Formation of Toxic Metabolites
AN ABSTRACT OF THE THESIS OF Jill E. Schrlau for the degree of Master of Science in Environmental Engineering presented on September 20, 2016. Title: Transformation of Phenanthrene by Mycobacterium sp. ELW1 and the Formation of Toxic Metabolites. Abstract approved: _____________________________________________________________________ Lewis Semprini Staci Simonich The ability of Mycobacterium sp. ELW1, a novel microbe capable of alkene oxidation, to co-metabolize phenanthrene (PHE) was studied. ELW1 was able to completely co-metabolize PHE, at different concentrations below its water solubility limit, in an aqueous environment. The alkene monooxygenases in ELW1, used to initiate oxidation of PHE, were effectively inhibited by 1-octyne despite some PHE transformation observed. PHE metabolites consisted of only hydroxyphenanthrenes (OHPHEs) with trans-9,10-dihydroxy-9,10-dihydrophenanthrene (trans-9,10-PHE), the primary product, comprising more than 90% of the total metabolites formed in both PHE-exposed cells and 1-octyne controls. Mass balance was estimated by summing the zero-order formation rates of OHPHE metabolites and comparing these to the zero-order transformation rates PHE in PHE-exposed cells. The transformation rates of PHE and were in good agreement with the formation rates of the metabolites. PHE transformation followed first-order rates that, when normalized by biomass, were in the range of those estimated by the ratio of the Michaelis-Menten kinetic variables of maximum transformation rate (kmax) to the half-saturation constant (KS). Estimated values for kmax to KS obtained through both non-linear and linearization methods resulted in kmax/KS estimates that were a factor of ~3 lower compared to experimental values. -
Organic Seminar Abstracts
Digitized by the Internet Archive in 2012 with funding from University of Illinois Urbana-Champaign http://archive.org/details/organicsemin1971752univ / a ORGANIC SEMINAR ABSTRACTS 1971-1972 Semester II School of Chemical Sciences Department of Chemistry- University of Illinois Urbana, Illinois 3 SEMINAR TOPICS II Semester 1971-72 Reactions of Alkyl Ethers Involving n- Complexes on a Reaction Pathway 125 Jerome T. Adams New Syntheses of Helicenes 127 Alan Morrice Recent Advances in Drug Detection and Analysis I36 Ronald J. Convers The Structure of Carbonium Ions with Multiple Neighboring Groups 138 William J. Work Recent Reactions of the DMSO-DCC Reagent ll+O James A. Franz Nucleophilic Acylation 1^2 Janet Ollinger The Chemistry of Camptothecin lU^ Dale Pigott Stereoselective Syntheses and Absolute Configuration of Cecropia Juvenile Horomone 1U6 John C. Greenfield Uleine and Related Aspidosperma Alkaloids 155 Glen Tolman Strategies in Oligonucleotide Synthesis 162 Graham Walker Stable Carbocations: C-13 Nuclear Magnetic Resonance Studies 16U Moses W. McMillan Organic Chlorosulfinates 166 Steven W. Moje Recent Advances in the Chemistry of Penicillins and Cephalosporins 168 Ronald Stroshane Cerium (iv) Oxidations 175 William C. Christopfel A New Total Synthesis of Vitamin D 18 William Graham Ketone Transpositions 190 Ann L. Crumrine - 125 - REACTIONS OF ALKYL ETHERS INVOLVING n-COMPLEXES ON A REACTION PATHWAY Reported by Jerome T. Adams February 2k 1972 The n-complex (l) has been described as an intermediate on the reaction pathway for electrophilic aromatic substitution and acid catalyzed rearrange- ment of alkyl aryl ethers along with sigma (2) and pi (3) type intermediates. 1 ' 2 +xR Physical evidence for the existence of n-complexes of alkyl aryl ethers was found in the observation of methyl phenyl ononium ions by nmr 3 and ir observation of n-complexes of anisole with phenol.