Xylariaceous Fungi As Endophytes
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Biscogniauxia Granmoi (Xylariaceae) in Europe
©Österreichische Mykologische Gesellschaft, Austria, download unter www.biologiezentrum.at Osten. Z.Pilzk 8(1999) 139 Biscogniauxia granmoi (Xylariaceae) in Europe THOMAS L£SS0E CHRISTIAN SCHEUER Botanical Institute, Copenhagen University Institut fiir Botanik der Karl-Franzens-Universitat Oster Farimagsgade 2D Holteigasse 6 DK-1353 Copenhagen K, Denmark A-8010 Graz, Austria e-mail: [email protected] e-mail: [email protected] ALFRED GRANMO Trornso Museum, University of Tromse N-9037 Tromso, Norway e-mail: [email protected] Received 5. 7. 1999 Key words: Xylariaceae, Biscogniauxia. - Taxonomy, distribution. - Fungi of Europe, Asia. Abstract: Biscogniauxia granmoi, growing on Prunus padus (incl. var. pubescens = Padus asiatica) is reported from Europe and Asia, with material from Austria, Latvia, Norway, Poland, and Far Eastern Russia. It is compared with B. nummulana s. str., B. capnodes and B. simphcior. The taxon was included in the recent revision of Biscogniauxia by JU & al. {1998, Mycotaxon 66: 50) under the name "B. pruni GRANMO, L/ESS0E & SCHEUER" nom. prov. Zusammenfassung: Biscogniauxia granmoi, die bisher ausschließlich auf Prunus padus (inkl. var pubescens = Padus asiatica) gefunden wurde, wird aufgrund von Aufsammlungen aus Europa und Asien vorgestellt. Die bisherigen Belege stammen aus Österreich, Litauen, Norwegen, Polen und dem femöstlichen Teil Rußlands. Die Unterschiede zu B. nummulana s. Str., B. capnodes und H simphaor werden diskutiert. Dieses Taxon wurde unter dem Namen "B. pruni Granmo, l.aessoe & Scheuer" nom. prov. schon von JU & al. (1998, Mycotaxon 66: 50) in ihre Revision der Gattung Biscogniauxia aufge- nommen. The genus Biscogniauxia KUNTZE (Xylariaceae) was resurrected and amended by POUZAR (1979, 1986) for a group of Xylariaceae with applanate dark stromata that MILLER (1961) treated in Hypoxylon BULL., and for a group of species with thick, discoid stromata formerly placed in Nummularia TUL. -
Phylogenetic Assignment of the Fungicolous Hypoxylon Invadens (Ascomycota, Xylariales) and Investigation of Its Secondary Metabolites
microorganisms Article Phylogenetic Assignment of the Fungicolous Hypoxylon invadens (Ascomycota, Xylariales) and Investigation of its Secondary Metabolites Kevin Becker 1,2 , Christopher Lambert 1,2,3 , Jörg Wieschhaus 1 and Marc Stadler 1,2,* 1 Department of Microbial Drugs, Helmholtz Centre for Infection Research GmbH (HZI), Inhoffenstraße 7, 38124 Braunschweig, Germany; [email protected] (K.B.); [email protected] (C.L.); [email protected] (J.W.) 2 German Centre for Infection Research Association (DZIF), Partner site Hannover-Braunschweig, Inhoffenstraße 7, 38124 Braunschweig, Germany 3 Department for Molecular Cell Biology, Helmholtz Centre for Infection Research GmbH (HZI) Inhoffenstraße 7, 38124 Braunschweig, Germany * Correspondence: [email protected]; Tel.: +49-531-6181-4240; Fax: +49-531-6181-9499 Received: 23 July 2020; Accepted: 8 September 2020; Published: 11 September 2020 Abstract: The ascomycete Hypoxylon invadens was described in 2014 as a fungicolous species growing on a member of its own genus, H. fragiforme, which is considered a rare lifestyle in the Hypoxylaceae. This renders H. invadens an interesting target in our efforts to find new bioactive secondary metabolites from members of the Xylariales. So far, only volatile organic compounds have been reported from H. invadens, but no investigation of non-volatile compounds had been conducted. Furthermore, a phylogenetic assignment following recent trends in fungal taxonomy via a multiple sequence alignment seemed practical. A culture of H. invadens was thus subjected to submerged cultivation to investigate the produced secondary metabolites, followed by isolation via preparative chromatography and subsequent structure elucidation by means of nuclear magnetic resonance (NMR) spectroscopy and high-resolution mass spectrometry (HR-MS). -
Resurrection and Emendation of the Hypoxylaceae, Recognised from a Multigene Phylogeny of the Xylariales
Mycol Progress DOI 10.1007/s11557-017-1311-3 ORIGINAL ARTICLE Resurrection and emendation of the Hypoxylaceae, recognised from a multigene phylogeny of the Xylariales Lucile Wendt1,2 & Esteban Benjamin Sir3 & Eric Kuhnert1,2 & Simone Heitkämper1,2 & Christopher Lambert1,2 & Adriana I. Hladki3 & Andrea I. Romero4,5 & J. Jennifer Luangsa-ard6 & Prasert Srikitikulchai6 & Derek Peršoh7 & Marc Stadler1,2 Received: 21 February 2017 /Revised: 12 April 2017 /Accepted: 19 April 2017 # The Author(s) 2017. This article is an open access publication Abstract A multigene phylogeny was constructed, including polymerase II (RPB2), and beta-tubulin (TUB2). Specimens a significant number of representative species of the main were selected based on more than a decade of intensive mor- lineages in the Xylariaceae and four DNA loci the internal phological and chemotaxonomic work, and cautious taxon transcribed spacer region (ITS), the large subunit (LSU) of sampling was performed to cover the major lineages of the the nuclear rDNA, the second largest subunit of the RNA Xylariaceae; however, with emphasis on hypoxyloid species. The comprehensive phylogenetic analysis revealed a clear-cut This article is part of the “Special Issue on ascomycete systematics in segregation of the Xylariaceae into several major clades, honor of Richard P. Korf who died in August 2016”. which was well in accordance with previously established morphological and chemotaxonomic concepts. One of these The present paper is dedicated to Prof. Jack D. Rogers, on the occasion of his fortcoming 80th birthday. clades contained Annulohypoxylon, Hypoxylon, Daldinia,and other related genera that have stromatal pigments and a Section Editor: Teresa Iturriaga and Marc Stadler nodulisporium-like anamorph. -
Endophytic Species of Xylaria: Cultural and Isozymic Studies
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Sydowia Jahr/Year: 1993 Band/Volume: 45 Autor(en)/Author(s): Rodrigues K. F., Leuchtmann A., Petrini Orlando Artikel/Article: Endophytic species of Xylaria: cultural and isozymic studies. 116-138 ©Verlag Ferdinand Berger & Söhne Ges.m.b.H., Horn, Austria, download unter www.biologiezentrum.at Endophytic species of Xylaria: cultural and isozymic studies K. F. Rodrigues , A. Leuchtmann & 0. Petrini 'The New York Botanical Garden, Bronx, New York, 10458-5126, USA 2Geobotanisches Institut ETH, Zollikerstrasse 107, CH-8008 Zurich, Switzerland 'Mikrobiologisches Institut, ETH-Zentrum, CH-8092 Zurich, Switzerland Rodrigues, K.F., A. Leuchtmann & O. Petrini (1993). Endophytic species of Xylaria: cultural and isozymic studies. - Sydowia 45 (1): 116-138. Cultural descriptions of endophytic Xylaria species from an Amazonian palm, Euterpe oleracea, are presented. Eighty-one isolates representing 15 species of Xylaria were examined for isozyme variation by means of horizontal starch gel electrophoresis. Results from the isozyme analysis revealed a high degree of intra- and interspecific diversity among Xylaria species. Keywords: endophytes, isozymes, tropical fungi, Xylariaceae, Euterpe oleracea. The genus Xylaria and other members of the Xylariaceae are commonly isolated endophytes. The identification at the species level of putative endophytic Xylaria grown in culture is still a difficult task because they rarely produce morphologically diagnostic structures, and teleomorphs are seldom formed. Indeed, many of them may differ from free-living forms and some might not produce the teleomorph at all (Brunner & Petrini, 1992). Anamorphs produced in culture are re- latively easy to identify to the genus because of their typical stromata, conidiophores and conidial development. -
Characterizing Fungal Decay of Beech Wood: Potential for Biotechnological Applications
microorganisms Article Characterizing Fungal Decay of Beech Wood: Potential for Biotechnological Applications Ehsan Bari 1,* , Katie Ohno 2, Nural Yilgor 3 , Adya P. Singh 4, Jeffrey J. Morrell 5, Antonio Pizzi 6 , Mohammad Ali Tajick Ghanbary 7 and Javier Ribera 8,* 1 Department of Wood Science and Engineering, Section of Wood Microbiology and Genetic, Technical Faculty of No. 1, Mazandaran Branch, Technical and Vocational University (TVU), Sari 4816831168, Iran 2 USDA Forest Service, Forest Products Laboratory, One Gifford Pinchot Drive, Madison, WI 53726, USA; [email protected] 3 Department of Forest Products Chemistry and Technology Division, Forest Industry Engineering, Forestry Faculty, Istanbul University Cerrahpa¸sa,34473 Istanbul, Turkey; [email protected] 4 Scion, Rotorua 3046, New Zealand; [email protected] 5 National Centre for Timber Durability and Design Life, University of the Sunshine Coast, Brisbane 4102, Australia; [email protected] 6 ENSTIB-LERMAB, University of Lorraine, BP 21042, CEDEX 09, 88051 Epinal, France; [email protected] 7 Department of Mycology and Plant Pathology, College of Agronomic Sciences, Sari Agricultural Sciences and Natural Resources University, Sari 4818166996, Iran; [email protected] 8 Laboratory for Cellulose & Wood Materials, Empa-Swiss Federal Laboratories for Materials Science and Technology, CH-9014 St. Gallen, Switzerland * Correspondence: [email protected] (E.B.); [email protected] (J.R.); Tel.: +98-9354367572 (E.B.); +41-587657607 (J.R.) Abstract: The biotechnological potential of nine decay fungi collected from stored beech logs at a pulp and paper factory yard in Northern Iran was investigated. Beech blocks exposed to the Citation: Bari, E.; Ohno, K.; Yilgor, fungi in a laboratory decay test were used to study changes in cell wall chemistry using both wet N.; Singh, A.P.; Morrell, J.J.; Pizzi, A.; chemistry and spectroscopic methods. -
Secondary Metabolites from the Genus Xylaria and Their Bioactivities
CHEMISTRY & BIODIVERSITY – Vol. 11 (2014) 673 REVIEW Secondary Metabolites from the Genus Xylaria and Their Bioactivities by Fei Song, Shao-Hua Wu*, Ying-Zhe Zhai, Qi-Cun Xuan, and Tang Wang Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan Institute of Microbiology, Yunnan University, Kunming 650091, P. R. China (phone: þ86-871-65032423; e-mail: [email protected]) Contents 1. Introduction 2. Secondary Metabolites 2.1. Sesquiterpenoids 2.1.1. Eremophilanes 2.1.2. Eudesmanolides 2.1.3. Presilphiperfolanes 2.1.4. Guaianes 2.1.5. Brasilanes 2.1.6. Thujopsanes 2.1.7. Bisabolanes 2.1.8. Other Sesquiterpenes 2.2. Diterpenoids and Diterpene Glycosides 2.3. Triterpene Glycosides 2.4. Steroids 2.5. N-Containing Compounds 2.5.1. Cytochalasins 2.5.2. Cyclopeptides 2.5.3. Miscellaneous Compounds 2.6. Aromatic Compounds 2.6.1. Xanthones 2.6.2. Benzofuran Derivatives 2.6.3. Benzoquinones 2.6.4. Coumarins and Isocoumarins 2.6.5. Chroman Derivatives 2.6.6. Naphthalene Derivatives 2.6.7. Anthracenone Derivatives 2.6.8. Miscellaneous Phenolic Derivatives 2.7. Pyranone Derivatives 2.8. Polyketides 3. Biological Activities 3.1. Antimicrobial Activity 3.2. Antimalarial Activity 2014 Verlag Helvetica Chimica Acta AG, Zrich 674 CHEMISTRY & BIODIVERSITY – Vol. 11 (2014) 3.3. Cytotoxic Activity 3.4. Other Activities 4. Conclusions 1. Introduction. – Xylaria Hill ex Schrank is the largest genus of the family Xylariaceae Tul.&C.Tul. (Xylariales, Sordariomycetes) and presently includes ca. 300 accepted species of stromatic pyrenomycetes [1]. Xylaria species are widespread from the temperate to the tropical zones of the earth [2]. -
Dimensions of Biodiversity
Dimensions of Biodiversity NATIONAL SCIENCE FOUNDATION CO-FUNDED BY 2010–2015 PROJECTS Introduction 4 Project Abstracts 2015 8 Project Updates 2014 30 Project Updates 2013 42 Project Updates 2012 56 Project Updates 2011 72 Project Updates 2010 88 FRONT COVER IMAGES A B f g h i k j C l m o n q p r D E IMAGE CREDIT THIS PAGE FRONT COVER a MBARI & d Steven Haddock f Steven Haddock k Steven Haddock o Carolyn Wessinger Peter Girguis e Carolyn g Erin Tripp l Lauren Schiebelhut p Steven Litaker b James Lendemer Wessinger h Marty Condon m Lawrence Smart q Sahand Pirbadian & c Matthew L. Lewis i Marty Condon n Verity Salmon Moh El-Naggar j Niklaus Grünwald r Marty Condon FIELD SITES Argentina France Singapore Australia French Guiana South Africa Bahamas French Polynesia Suriname Belize Germany Spain Bermuda Iceland Sweden Bolivia Japan Switzerland Brazil Madagascar Tahiti Canada Malaysia Taiwan China Mexico Thailand Colombia Norway Trinidad Costa Rica Palau United States Czech Republic Panama United Kingdom Dominican Peru Venezuela Republic Philippines Labrador Sea Ecuador Poland North Atlantic Finland Puerto Rico Ocean Russia North Pacific Ocean Saudi Arabia COLLABORATORS Argentina Finland Palau Australia France Panama Brazil Germany Peru Canada Guam Russia INTERNATIONAL PARTNERS Chile India South Africa China Brazil China Indonesia Sri Lanka (NSFC) (FAPESP) Colombia Japan Sweden Costa Rica Kenya United Denmark Malaysia Kingdom Ecuador Mexico ACKNOWLEDGMENTS Many NSF staff members, too numerous to We thank Mina Ta and Matthew Pepper for mention individually, assisted in the development their graphic design contribution to the abstract and implementation of the Dimensions of booklet. -
Taxonomic Re-Examination of Nine Rosellinia Types (Ascomycota, Xylariales) Stored in the Saccardo Mycological Collection
microorganisms Article Taxonomic Re-Examination of Nine Rosellinia Types (Ascomycota, Xylariales) Stored in the Saccardo Mycological Collection Niccolò Forin 1,* , Alfredo Vizzini 2, Federico Fainelli 1, Enrico Ercole 3 and Barbara Baldan 1,4,* 1 Botanical Garden, University of Padova, Via Orto Botanico, 15, 35123 Padova, Italy; [email protected] 2 Institute for Sustainable Plant Protection (IPSP-SS Torino), C.N.R., Viale P.A. Mattioli, 25, 10125 Torino, Italy; [email protected] 3 Department of Life Sciences and Systems Biology, University of Torino, Viale P.A. Mattioli, 25, 10125 Torino, Italy; [email protected] 4 Department of Biology, University of Padova, Via Ugo Bassi, 58b, 35131 Padova, Italy * Correspondence: [email protected] (N.F.); [email protected] (B.B.) Abstract: In a recent monograph on the genus Rosellinia, type specimens worldwide were revised and re-classified using a morphological approach. Among them, some came from Pier Andrea Saccardo’s fungarium stored in the Herbarium of the Padova Botanical Garden. In this work, we taxonomically re-examine via a morphological and molecular approach nine different Rosellinia sensu Saccardo types. ITS1 and/or ITS2 sequences were successfully obtained applying Illumina MiSeq technology and phylogenetic analyses were carried out in order to elucidate their current taxonomic position. Only the Citation: Forin, N.; Vizzini, A.; ITS1 sequence was recovered for Rosellinia areolata, while for R. geophila, only the ITS2 sequence was Fainelli, F.; Ercole, E.; Baldan, B. recovered. We proposed here new combinations for Rosellinia chordicola, R. geophila and R. horridula, Taxonomic Re-Examination of Nine R. ambigua R. -
Environmental Factors Influencing Macrofungi Communities In
This manuscript is contextually identical with the following published paper: Kuszegi, G., Siller, I., Dima, B., Takács, K., Merényi, Zs., Varga, T., Turcsányi, G., Bidló, A., Ódor, P. 2015. Drivers of macrofungal species composition in temperate forests, West Hungary: functional groups compared. Fungal Ecology 17: 69-83. DOI: 10.1016/j.funeco.2015.05.009 The original published pdf available in this website: http://authors.elsevier.com/sd/article/S0378112713004295 Title: Drivers of macrofungal species composition in temperate forests, West Hungary: functional groups compared Authors: Gergely Kutszegi1,*, Irén Siller2, Bálint Dima3, 6, Katalin Takács3, Zsolt Merényi4, Torda Varga4, Gábor Turcsányi3, András Bidló5, Péter Ódor1 1MTA Centre for Ecological Research, Institute of Ecology and Botany, Alkotmány út 2–4, H-2163 Vácrátót, Hungary, [email protected], [email protected]. 2Department of Botany, Institute of Biology, Szent István University, P.O. Box 2, H-1400 Budapest, Hungary, [email protected]. 3Department of Nature Conservation and Landscape Ecology, Institute of Environmental and Landscape Management, Szent István University, Páter Károly út 1, H-2100 Gödöllő, Hungary, [email protected], [email protected], [email protected]. 4Department of Plant Physiology and Molecular Plant Biology, Eötvös Loránd University, 1 Pázmány Péter sétány 1/C, H-1117 Budapest, Hungary, [email protected], [email protected]. 5Department of Forest Site Diagnosis and Classification, University -
Ascomyceteorg 06-02 Ascomyceteorg
Xylaria violaceorosea sp. nov. (Xylariaceae), a distinctive species discovered in Spain Jacques FOURNIER Summary: Xylaria violaceorosea is described as a new species based on the combination of distinctive ma- Alberto ROMÁN croscopic and microscopic characters. It is a lignicolous Xylaria with stromata roughly recalling those of X. hy- Javier BALDA poxylon but with a purplish pink outer layer that yields olivaceous yellow pigments in 10% KOH and relatively Enrique RUBIO large ascospores provided with gelatinous secondary appendages. Keywords: Ascomycota, Asturias, Cuevas de Andina, taxonomy, Xylariales. Ascomycete.org, 6 (2) : 35-39. Resumen: Se describe Xylaria violaceorosea como nueva especie en base a sus peculiares caracteres macro Mai 2014 y microscópicos. Esta Xylaria lignícola se caracteriza por formar estromas rugosos que recuerdan vagamente Mise en ligne le 16/05/2014 los de Xylaria hypoxylon, con un estrato externo con tonalidades sonrosadas o purpúreas que desprende pigmentos de color oliváceo o amarillo en KOH al 10% y por sus ascósporas relativamente grandes provis- tas de apéndices gelatinosos secundarios. Palabras clave: Ascomycota, Asturias, Cuevas de Andina, taxonomia, Xylariales. Résumé: Xylaria violaceorosea est décrite comme une espèce nouvelle pour ses caractères macroscopiques et microscopiques remarquables. C’est une espèce lignicole dont les stromas rappellent de loin ceux de X. hy- poxylon mais qui s’en distinguent par un revêtement rose-pourpre qui libère un pigment jaune olivacé dans la potasse à 10 % et des ascospores relativement grandes pourvues d’appendices secondaires gélatineux. Mots-clés: Ascomycota, Asturias, Cuevas de Andina, taxinomie, Xylariales. Introduction gent. Ascospores were mounted in aqueous nigrosin or dilute India ink to show the secondary appendages. -
UC Riverside UC Riverside Previously Published Works
UC Riverside UC Riverside Previously Published Works Title Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota). Permalink https://escholarship.org/uc/item/3fm155t1 Authors U'Ren, Jana M Miadlikowska, Jolanta Zimmerman, Naupaka B et al. Publication Date 2016-05-01 DOI 10.1016/j.ympev.2016.02.010 License https://creativecommons.org/licenses/by-nc-nd/4.0/ 4.0 Peer reviewed eScholarship.org Powered by the California Digital Library University of California *Graphical Abstract (for review) ! *Highlights (for review) • Endophytes illuminate Xylariaceae circumscription and phylogenetic structure. • Endophytes occur in lineages previously not known for endophytism. • Boreal and temperate lichens and non-flowering plants commonly host Xylariaceae. • Many have endophytic and saprotrophic life stages and are widespread generalists. *Manuscript Click here to view linked References 1 Contributions of North American endophytes to the phylogeny, 2 ecology, and taxonomy of Xylariaceae (Sordariomycetes, 3 Ascomycota) 4 5 6 Jana M. U’Ren a,* Jolanta Miadlikowska b, Naupaka B. Zimmerman a, François Lutzoni b, Jason 7 E. Stajichc, and A. Elizabeth Arnold a,d 8 9 10 a University of Arizona, School of Plant Sciences, 1140 E. South Campus Dr., Forbes 303, 11 Tucson, AZ 85721, USA 12 b Duke University, Department of Biology, Durham, NC 27708-0338, USA 13 c University of California-Riverside, Department of Plant Pathology and Microbiology and Institute 14 for Integrated Genome Biology, 900 University Ave., Riverside, CA 92521, USA 15 d University of Arizona, Department of Ecology and Evolutionary Biology, 1041 E. Lowell St., 16 BioSciences West 310, Tucson, AZ 85721, USA 17 18 19 20 21 22 23 24 * Corresponding author: University of Arizona, School of Plant Sciences, 1140 E. -
Arthroxylaria Elegans, a New Coprophilous Anamorphic Fungus Allied with the Xylariaceae, with Notes on the Genus Bisporostilbella*)
C z e c ii m y c o l . 53 (4), 2002 Arthroxylaria elegans, a new coprophilous anamorphic fungus allied with the Xylariaceae, with notes on the genus Bisporostilbella*) K eith A. S eifert1, W alter Gams2 and G erry Louis-Seize1, 1 Eastern Cereal and Oilseed Research Centre, Agriculture and Agri-Food Canada, Research Branch, Ottawa, Ontario K1A 0C6, Canada (email: [email protected]) 2Centraalbureau voor Schimmelcultures, P. O. Box 85167, 3508 AD Utrecht, the Netherlands (email: [email protected]) Seifert K. A., Gams W. and Louis-Seize G. (2002): Arthroxylaria elegans, a new coprophilous anamorphic fungus allied with the Xylariaceae, with notes on the genus Bisporostilbella. - Czech Mycol. 53: 297-307 The new genus and species Arthroxylaria elegans is described for a synnematous hyphomycete isolated from pack rat dung. The fungus is characterized by the production of tall, lightly pigmented, indeterminate synnemata covered with a layer of unbranched or sparingly branched chains of 0-1-septate meristem arthroconidia. A synanamorph with sympodially-proliferating conidiogenous cells, producing minute aseptate conidia, is also produced. Phylogenetic analyses of partial small subunit ribosomal DNA sequences suggest that the fungus is related to the Xylariaceae, Xylariales, and analysis of internal transcribed spacer sequences places the fungus in X ylaria. The new species is compared with other anamorphs of the Xylariaceae, and a number of similar synnematous and mononematous hyphomycetes, including the poorly understood Bisporostilbella fusca, which is illustrated based on holotype material. Key words: anamorph taxonomy, coprophilous fungi, hyphomycetes, biodiversity Seifert K. A., Gams W. a Louis-Seize G. (2002): Arthroxylaria elegans nová koprofilní anamorfní houba příbuzná čeledi Xylariaceae, s poznámkami o rodu Bisporostilbella.