Molecular Systematics of a Speciose, Cosmopolitan Songbird Genus: Defining the Limits Of, and Relationships Among, the Turdus Th
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Hermit Thrush (<Em>Catharus Guttatus</Em>) and Veery (<Em>C
East Tennessee State University Digital Commons @ East Tennessee State University Electronic Theses and Dissertations Student Works 5-2010 Hermit Thrush (Catharus guttatus) and Veery (C. fuscescens) Breeding Habitat Associations in Southern Appalachian High-Elevation Forests. Andrew J. Laughlin East Tennessee State University Follow this and additional works at: https://dc.etsu.edu/etd Part of the Terrestrial and Aquatic Ecology Commons Recommended Citation Laughlin, Andrew J., "Hermit Thrush (Catharus guttatus) and Veery (C. fuscescens) Breeding Habitat Associations in Southern Appalachian High-Elevation Forests." (2010). Electronic Theses and Dissertations. Paper 1695. https://dc.etsu.edu/etd/1695 This Thesis - Open Access is brought to you for free and open access by the Student Works at Digital Commons @ East Tennessee State University. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Digital Commons @ East Tennessee State University. For more information, please contact [email protected]. Hermit Thrush (Catharus guttatus) and Veery (C. fuscescens) Breeding Habitat Associations in Southern Appalachian High-Elevation Forests __________________ A thesis presented to the faculty of the Department of Biological Sciences East Tennessee State University In partial fulfillment of the requirements for degree Masters of Science in Biological Sciences _________________ by Andrew J. Laughlin May 2010 __________________ Dr. Fred J. Alsop III, Chair Dr. Istvan Karsai Dr. Thomas F. Laughlin Keywords: Birds, Habitat Partitioning, Principal Components Analysis ABSTRACT Hermit Thrush (Catharus guttatus) and Veery (C. fuscescens) Breeding Habitat Associations in Southern Appalachian High-Elevation Forests by Andrew J. Laughlin The Hermit Thrush is a new breeding bird in the Southern Appalachian high-elevation mountains, having expanded its range southward over the last few decades. -
Disaggregation of Bird Families Listed on Cms Appendix Ii
Convention on the Conservation of Migratory Species of Wild Animals 2nd Meeting of the Sessional Committee of the CMS Scientific Council (ScC-SC2) Bonn, Germany, 10 – 14 July 2017 UNEP/CMS/ScC-SC2/Inf.3 DISAGGREGATION OF BIRD FAMILIES LISTED ON CMS APPENDIX II (Prepared by the Appointed Councillors for Birds) Summary: The first meeting of the Sessional Committee of the Scientific Council identified the adoption of a new standard reference for avian taxonomy as an opportunity to disaggregate the higher-level taxa listed on Appendix II and to identify those that are considered to be migratory species and that have an unfavourable conservation status. The current paper presents an initial analysis of the higher-level disaggregation using the Handbook of the Birds of the World/BirdLife International Illustrated Checklist of the Birds of the World Volumes 1 and 2 taxonomy, and identifies the challenges in completing the analysis to identify all of the migratory species and the corresponding Range States. The document has been prepared by the COP Appointed Scientific Councilors for Birds. This is a supplementary paper to COP document UNEP/CMS/COP12/Doc.25.3 on Taxonomy and Nomenclature UNEP/CMS/ScC-Sc2/Inf.3 DISAGGREGATION OF BIRD FAMILIES LISTED ON CMS APPENDIX II 1. Through Resolution 11.19, the Conference of Parties adopted as the standard reference for bird taxonomy and nomenclature for Non-Passerine species the Handbook of the Birds of the World/BirdLife International Illustrated Checklist of the Birds of the World, Volume 1: Non-Passerines, by Josep del Hoyo and Nigel J. Collar (2014); 2. -
The Birds (Aves) of Oromia, Ethiopia – an Annotated Checklist
European Journal of Taxonomy 306: 1–69 ISSN 2118-9773 https://doi.org/10.5852/ejt.2017.306 www.europeanjournaloftaxonomy.eu 2017 · Gedeon K. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:A32EAE51-9051-458A-81DD-8EA921901CDC The birds (Aves) of Oromia, Ethiopia – an annotated checklist Kai GEDEON 1,*, Chemere ZEWDIE 2 & Till TÖPFER 3 1 Saxon Ornithologists’ Society, P.O. Box 1129, 09331 Hohenstein-Ernstthal, Germany. 2 Oromia Forest and Wildlife Enterprise, P.O. Box 1075, Debre Zeit, Ethiopia. 3 Zoological Research Museum Alexander Koenig, Centre for Taxonomy and Evolutionary Research, Adenauerallee 160, 53113 Bonn, Germany. * Corresponding author: [email protected] 2 Email: [email protected] 3 Email: [email protected] 1 urn:lsid:zoobank.org:author:F46B3F50-41E2-4629-9951-778F69A5BBA2 2 urn:lsid:zoobank.org:author:F59FEDB3-627A-4D52-A6CB-4F26846C0FC5 3 urn:lsid:zoobank.org:author:A87BE9B4-8FC6-4E11-8DB4-BDBB3CFBBEAA Abstract. Oromia is the largest National Regional State of Ethiopia. Here we present the first comprehensive checklist of its birds. A total of 804 bird species has been recorded, 601 of them confirmed (443) or assumed (158) to be breeding birds. At least 561 are all-year residents (and 31 more potentially so), at least 73 are Afrotropical migrants and visitors (and 44 more potentially so), and 184 are Palaearctic migrants and visitors (and eight more potentially so). Three species are endemic to Oromia, 18 to Ethiopia and 43 to the Horn of Africa. 170 Oromia bird species are biome restricted: 57 to the Afrotropical Highlands biome, 95 to the Somali-Masai biome, and 18 to the Sudan-Guinea Savanna biome. -
A Complete Species-Level Molecular Phylogeny For
Author's personal copy Available online at www.sciencedirect.com Molecular Phylogenetics and Evolution 47 (2008) 251–260 www.elsevier.com/locate/ympev A complete species-level molecular phylogeny for the ‘‘Eurasian” starlings (Sturnidae: Sturnus, Acridotheres, and allies): Recent diversification in a highly social and dispersive avian group Irby J. Lovette a,*, Brynn V. McCleery a, Amanda L. Talaba a, Dustin R. Rubenstein a,b,c a Fuller Evolutionary Biology Program, Laboratory of Ornithology, Cornell University, Ithaca, NY 14950, USA b Department of Neurobiology and Behavior, Cornell University, Ithaca, NY 14850, USA c Department of Integrative Biology and Museum of Vertebrate Zoology, University of California, Berkeley, CA 94720, USA Received 2 August 2007; revised 17 January 2008; accepted 22 January 2008 Available online 31 January 2008 Abstract We generated the first complete phylogeny of extant taxa in a well-defined clade of 26 starling species that is collectively distributed across Eurasia, and which has one species endemic to sub-Saharan Africa. Two species in this group—the European starling Sturnus vulgaris and the common Myna Acridotheres tristis—now occur on continents and islands around the world following human-mediated introductions, and the entire clade is generally notable for being highly social and dispersive, as most of its species breed colonially or move in large flocks as they track ephemeral insect or plant resources, and for associating with humans in urban or agricultural land- scapes. Our reconstructions were based on substantial mtDNA (4 kb) and nuclear intron (4 loci, 3 kb total) sequences from 16 species, augmented by mtDNA NDII gene sequences (1 kb) for the remaining 10 taxa for which DNAs were available only from museum skin samples. -
Tinamiformes – Falconiformes
LIST OF THE 2,008 BIRD SPECIES (WITH SCIENTIFIC AND ENGLISH NAMES) KNOWN FROM THE A.O.U. CHECK-LIST AREA. Notes: "(A)" = accidental/casualin A.O.U. area; "(H)" -- recordedin A.O.U. area only from Hawaii; "(I)" = introducedinto A.O.U. area; "(N)" = has not bred in A.O.U. area but occursregularly as nonbreedingvisitor; "?" precedingname = extinct. TINAMIFORMES TINAMIDAE Tinamus major Great Tinamou. Nothocercusbonapartei Highland Tinamou. Crypturellus soui Little Tinamou. Crypturelluscinnamomeus Thicket Tinamou. Crypturellusboucardi Slaty-breastedTinamou. Crypturellus kerriae Choco Tinamou. GAVIIFORMES GAVIIDAE Gavia stellata Red-throated Loon. Gavia arctica Arctic Loon. Gavia pacifica Pacific Loon. Gavia immer Common Loon. Gavia adamsii Yellow-billed Loon. PODICIPEDIFORMES PODICIPEDIDAE Tachybaptusdominicus Least Grebe. Podilymbuspodiceps Pied-billed Grebe. ?Podilymbusgigas Atitlan Grebe. Podicepsauritus Horned Grebe. Podicepsgrisegena Red-neckedGrebe. Podicepsnigricollis Eared Grebe. Aechmophorusoccidentalis Western Grebe. Aechmophorusclarkii Clark's Grebe. PROCELLARIIFORMES DIOMEDEIDAE Thalassarchechlororhynchos Yellow-nosed Albatross. (A) Thalassarchecauta Shy Albatross.(A) Thalassarchemelanophris Black-browed Albatross. (A) Phoebetriapalpebrata Light-mantled Albatross. (A) Diomedea exulans WanderingAlbatross. (A) Phoebastriaimmutabilis Laysan Albatross. Phoebastrianigripes Black-lootedAlbatross. Phoebastriaalbatrus Short-tailedAlbatross. (N) PROCELLARIIDAE Fulmarus glacialis Northern Fulmar. Pterodroma neglecta KermadecPetrel. (A) Pterodroma -
Resolving Phylogenetic Relationships Within Passeriformes Based on Mitochondrial Genes and Inferring the Evolution of Their Mitogenomes in Terms of Duplications
GBE Resolving Phylogenetic Relationships within Passeriformes Based on Mitochondrial Genes and Inferring the Evolution of Their Mitogenomes in Terms of Duplications Paweł Mackiewicz1,*, Adam Dawid Urantowka 2, Aleksandra Kroczak1,2, and Dorota Mackiewicz1 1Department of Bioinformatics and Genomics, Faculty of Biotechnology, University of Wrocław, Poland 2Department of Genetics, Wroclaw University of Environmental and Life Sciences, Poland *Corresponding author: E-mail: pamac@smorfland.uni.wroc.pl. Accepted: September 30, 2019 Abstract Mitochondrial genes are placed on one molecule, which implies that they should carry consistent phylogenetic information. Following this advantage, we present a well-supported phylogeny based on mitochondrial genomes from almost 300 representa- tives of Passeriformes, the most numerous and differentiated Aves order. The analyses resolved the phylogenetic position of para- phyletic Basal and Transitional Oscines. Passerida occurred divided into two groups, one containing Paroidea and Sylvioidea, whereas the other, Passeroidea and Muscicapoidea. Analyses of mitogenomes showed four types of rearrangements including a duplicated control region (CR) with adjacent genes. Mapping the presence and absence of duplications onto the phylogenetic tree revealed that the duplication was the ancestral state for passerines and was maintained in early diverged lineages. Next, the duplication could be lost and occurred independently at least four times according to the most parsimonious scenario. In some lineages, two CR copies have been inherited from an ancient duplication and highly diverged, whereas in others, the second copy became similar to the first one due to concerted evolution. The second CR copies accumulated over twice as many substitutions as the first ones. However, the second CRs were not completely eliminated and were retained for a long time, which suggests that both regions can fulfill an important role in mitogenomes. -
S Montserrat National Trust, Montserrat Tourist Board, That Rats Rattus Spp
Important Bird Areas in the Caribbean – Montserrat ■ MONTSERRAT LAND AREA 102 km2 ALTITUDE 0–914 m HUMAN POPULATION 4,819 CAPITAL Plymouth (defunct due to volcanic eruption) IMPORTANT BIRD AREAS 3, totalling 16.5 km2 IMPORTANT BIRD AREA PROTECTION 48% BIRD SPECIES 101 THREATENED BIRDS 2 RESTRICTED-RANGE BIRDS 12 GEOFF HILTON (ROYAL SOCIETY FOR THE PROTECTION OF BIRDS), LLOYD MARTIN AND JAMES ‘SCRIBER’ DALY (DEPARTMENT OF ENVIRONMENT, MONTSERRAT) AND RICHARD ALLCORN (FAUNA AND FLORA INTERNATIONAL) The endemic Montserrat Oriole lost 60% of its forest habitat during the eruptions of the Soufriere Hills volcano. (PHOTO: JAMES MORGAN/DWCT) INTRODUCTION in the lowlands, through semi-deciduous and evergreen wet forest in the hills, to montane elfin forest on the highest peaks. Montserrat is a UK Overseas Territory in the Leeward Islands There are small areas of littoral woodland, and in the driest towards the northern end of the Lesser Antilles, just 40 km areas of the lowlands, the vegetation is xerophytic scrub, with south-west of Antigua and between the islands of Nevis and numerous cacti. All but a few small forest patches were Guadeloupe. The island is about 16 km long and 11 km wide, apparently cleared during the plantation era, and the bulk of and its volcanic origins are reflected in an extremely rugged the remaining forest is therefore secondary. In the Centre topography. There are three major volcanic hill ranges—the Hills, the largest remaining forest block, native trees are mixed Soufriere and South Soufriere Hills, the Centre Hills, and the with numerous large, non-native fruit trees—remnants of Silver Hills. -
South Africa Mega Birding Tour I 6Th to 30Th January 2018 (25 Days) Trip Report
South Africa Mega Birding Tour I 6th to 30th January 2018 (25 days) Trip Report Aardvark by Mike Bacon Trip report compiled by Tour Leader: Wayne Jones Rockjumper Birding Tours View more tours to South Africa Trip Report – RBT South Africa - Mega I 2018 2 Tour Summary The beauty of South Africa lies in its richness of habitats, from the coastal forests in the east, through subalpine mountain ranges and the arid Karoo to fynbos in the south. We explored all of these and more during our 25-day adventure across the country. Highlights were many and included Orange River Francolin, thousands of Cape Gannets, multiple Secretarybirds, stunning Knysna Turaco, Ground Woodpecker, Botha’s Lark, Bush Blackcap, Cape Parrot, Aardvark, Aardwolf, Caracal, Oribi and Giant Bullfrog, along with spectacular scenery, great food and excellent accommodation throughout. ___________________________________________________________________________________ Despite havoc-wreaking weather that delayed flights on the other side of the world, everyone managed to arrive (just!) in South Africa for the start of our keenly-awaited tour. We began our 25-day cross-country exploration with a drive along Zaagkuildrift Road. This unassuming stretch of dirt road is well-known in local birding circles and can offer up a wide range of species thanks to its variety of habitats – which include open grassland, acacia woodland, wetlands and a seasonal floodplain. After locating a handsome male Northern Black Korhaan and African Wattled Lapwings, a Northern Black Korhaan by Glen Valentine -
Systematics of Zoothera Thrushes, and a Synthesis of True Thrush Molecular Systematic Relationships
Molecular Phylogenetics and Evolution 49 (2008) 377–381 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Short Communication Systematics of Zoothera thrushes, and a synthesis of true thrush molecular systematic relationships Gary Voelker a,*, John Klicka b a Department of Biology, University of Memphis, 3700 Walker Avenue, Memphis, TN 38152, USA b Barrick Museum of Natural History, Box 454012, University of Nevada Las Vegas, 4504 Maryland Parkway, Las Vegas, NV 89154-4012, USA 1. Introduction Questions regarding inter-specific relationships remain within both Catharus and Myadestes. At the inter-generic level, Klicka The true thrushes (Turdinae; Sibley and Monroe, 1990) are a et al. (2005) conducted analyses of true thrush relationships, using speciose lineage of songbirds, with a near-cosmopolitan distribu- the Sialia–Myadestes–Neocossyphus clade (hereafter referred to as tion. Following the systematic placement of true thrushes as a the ‘‘Sialia clade”) as the outgroup. While clearly a true thrush line- close relative of Old World flycatchers and chats (Muscicapinae) age, the Sialia clade is very divergent from other true thrush lin- by the DNA–DNA hybridization work of Sibley and Ahlquist eages. Homoplasy caused by the use of this divergent clade as a (1990), a number of molecular systematic studies have focused root could explain at least some of the as yet unresolved inter-gen- on various aspects of true thrush relationships. These studies have eric relationships within true thrushes. included phylogenetic assessments of genera membership in true Our main objective in this study is to use dense taxon sampling thrushes, assessments of relationships among and within true across true thrushes to resolve inter- and intra-generic relation- thrush genera, and the recognition of ‘‘new” species (Bowie et al., ships that remain unclear. -
Discovery of a Relict Lineage and Monotypic Family of Passerine Birds
Discovery of a relict lineage and monotypic family of passerine birds Based on a comprehensive molecular dataset of passerines birds we identified a branch with a single species, the Spotted Wren-babbler Spelaeornis formosus. We suggest that this represents a relict lineage, which we propose should be placed in its own family, Elachuridae. The scientific name Elachura formosa should be used. We analysed of one of the most comprehensive datasets to date of the largest passerine bird clade, Passerida, which comprises c. 36% of the World’s c. 10,500 bird species. We identified 10 primary branches in the tree. One of these primary branches was made up of a single species, the Spotted Wren-Babbler Spelaeornis formosus, which is a small Wren-like bird that occurs in mountains from the eastern Himalayas to southeast China. This species apparently represents an old branch in the large passerine tree, without any close living relatives. There have surely been other relatives on this branch, which have gone extinct. The fact that it resembles wren-babblers and wrens in appearance is either due to pure chance or to convergent evolution, which may result in similar appearances in unrelated species that live in similar environments. We proposed the new family name Elachuridae for this single species. We also suggested that the scientific name Elachura formosa should be used, and the English name be changed to Elachura, to highlight its distinctness. Timaliidae (56) Pellorneidae (69) Leiothrichidae (133) Zosteropidae (128) Sylviidae (70) Pnoepygidae -
An Update of Wallacels Zoogeographic Regions of the World
REPORTS To examine the temporal profile of ChC produc- specification of a distinct, and probably the last, 3. G. A. Ascoli et al., Nat. Rev. Neurosci. 9, 557 (2008). tion and their correlation to laminar deployment, cohort in this lineage—the ChCs. 4. J. Szentágothai, M. A. Arbib, Neurosci. Res. Program Bull. 12, 305 (1974). we injected a single pulse of BrdU into pregnant A recent study demonstrated that progeni- CreER 5. P. Somogyi, Brain Res. 136, 345 (1977). Nkx2.1 ;Ai9 females at successive days be- tors below the ventral wall of the lateral ventricle 6. L. Sussel, O. Marin, S. Kimura, J. L. Rubenstein, tween E15 and P1 to label mitotic progenitors, (i.e., VGZ) of human infants give rise to a medial Development 126, 3359 (1999). each paired with a pulse of tamoxifen at E17 to migratory stream destined to the ventral mPFC 7. S. J. Butt et al., Neuron 59, 722 (2008). + 18 8. H. Taniguchi et al., Neuron 71, 995 (2011). label NKX2.1 cells (Fig. 3A). We first quanti- ( ). Despite species differences in the develop- 9. L. Madisen et al., Nat. Neurosci. 13, 133 (2010). fied the fraction of L2 ChCs (identified by mor- mental timing of corticogenesis, this study and 10. J. Szabadics et al., Science 311, 233 (2006). + phology) in mPFC that were also BrdU+. Although our findings raise the possibility that the NKX2.1 11. A. Woodruff, Q. Xu, S. A. Anderson, R. Yuste, Front. there was ChC production by E15, consistent progenitors in VGZ and their extended neurogenesis Neural Circuits 3, 15 (2009). -
Breeding and the Annual Cycle in Three Trinidad Thrushes
BREEDING AND THE ANNUAL CYCLE IN THREE TRINIDAD THRUSHES D. w. SNOW AND B. K. SNOW fl1VE species of the Turdidae breed in Trinidad. One species of Catharus r and one of Platycichla are highland birds, breeding in montane forest mainly above 2,000 feet. The other three are typical members of the genus Turdus, they are widely distributed over the island and all occur from sea level to 2,000 feet, where the habitat is suitable. It is with the three Turdus species that this paper is concerned. Their habitat preferences are different but overlapping. T. albicollis is rather strictly confined to forest. T. fumigatus occurs in forest, well-timbered plantations, and even in gardens if they have large trees and are close to forest. T. nudigenis occurs in more open habitats: orchards, gardens, and park-like savanna. Outside the breeding season it also feeds to some extent in secondary forest. Thus in the breeding season T. albicollis and T. nudigenis are com- pletely isolated from each other by habitat, and T. fumigatus overlaps both of them. All three species feed on invertebrates obtained from the ground and on fruit, and no important differences were noted in their feeding habits, though the differences in their habitats must ensure that to some extent they take different foods. They are medium-sized thrushes, all of much the same build. T. albicollis, the forest thrush, is the smallest (weighs mostly 50-60 grams) ; T. fumigatus and T. nudigenis are about the same size (weigh mostly 65-SO grams and 60-75 grams, respectively).