Basic Course in Biopharmacy
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University of Szeged Basic Course in Biopharmacy Edited by: István Zupkó Ph.D. Authors: István Zupkó Ph.D. Eszter Ducza Ph.D. Árpád Márki Ph.D. Renáta Minorics Ph.D. Reviewed by: Gábor Halmos Ph.D. Szeged, 2015. This work is supported by the European Union, co-financed by the European Social Fund, within the framework of "Coordinated, practice-oriented, student-friendly modernization of biomedical education in three Hungarian universities (Pécs, Debrecen, Szeged), with focus on the strengthening of international competitiveness" TÁMOP-4.1.1.C-13/1/KONV-2014-0001 project. The curriculum can not be sold in any form! Contents 1. Basic concepts in pharmacology and biopharmacy. Routes of drug administration 1 1.1. Basic concepts in pharmacology and biopharmacy 1 1.2. Classification of routes of drug administration 2 1.2.1. Enteral drug administration 2 1.2.2. Parenteral drug administration 5 2. Receptors, signal transduction mechanisms 9 2.1. Introduction to pharmacological receptors 9 2.2. Signal transduction 10 2.3. G protein -coupled receptors ( GPCRs) 11 2.4. Ligand -gated ion channels 14 2.5. Receptors as enzymes 16 2.6. Nuclear hormone receptors and transcription factors 18 3. Dose –response relationships 21 3.1. General remarks 21 3.2. Concentration vs. response relationships in in vitro systems 22 3.3. Dose vs. response relationships in in vivo systems 26 4. Absorption and distribution of drugs and factors influencing this 30 4.1. Absorption of drugs 30 4.1.1. Main features of drug absorption 30 4.1.2. Absorption of drugs by passive diffusion 31 4.1.3. Absorption of drugs by active transport 33 4.1.4. Absorption of drugs by additional transport mechanisms 34 4.1.5. Factors influencing drug absorption 34 4.2. Distribution of drugs 37 4.2.1. General remarks 37 4.2.2. Volume of distribution 38 4.2.3. Binding to plasma proteins 39 4.2.4. Special drug distributions: the blood brain –barrier (BBB) and the placental barrier 39 5. The drug metabolism 42 5.1. The main features of the drug metabolism 42 5.2. Phase I of the drug metabolism 43 5.3. Phase II of the drug metabolism 48 5.4. Factors influencing the drug metabolism 50 6. Elimination, continuous intravenous infusion and multiple dosing regimen 53 6.1. Elimination 53 6.1.1. Renal excretion 53 6.1.2. Excretion by the liver 55 6.1.3. Pulmonary excretion 55 6.1.4. Salivary excretion 56 6.1.5. Excretion through the skin 56 6.1.6. Excretion into the breast milk 57 6.1.7. Clearance 57 6.2. Continuous intravenous infusion 58 6.2.1. Concept of plateau 59 6.2.2. Rate of infusion 59 6.2.3. Plateau fraction 61 6.2.4. Loading dose of the infusion 63 6.3. Multiple dosing regimen 63 6.3.1. Dosing interval ( τ) 65 6.3.2. Concept of plateau and minimum and peak plasma concentrations 66 6.3.3. Considerations during the application of a multiple dosing regimen 67 7. Compartmental models 70 7.1. One -compartment open model 71 7.1.1. One -compartment intravascular model 72 7.1.2. One -compartment extravascular model 74 7.2. Two -compartment open model 78 7.2.1. Two -compartment intravascular model 78 7.2.2. Two -compartment extravascular model 82 7.3. Effects of the ratio ka/ke on tmax and cmax 84 8. AUC, model-independent pharmacokinetics 87 8.1. Trapezoid method 87 8.2. Determination of AUC based on clearance 90 8.3. Model -independent pharmacokinetics 91 8.4. Application of model -independent calculations 95 8.4.1. Calculation of apparent volume of distribution at steady -state ( Vss ) 95 8.4.2. Calculation of the clearance ( Cl ) 96 8.4.3. Calculation of dosing rate 96 8.4.4. Calculation of bioavailability 97 9. Physiological and biological availability of drugs; bioequivalence 99 9.1. Introduction 99 9.2. Physiological availability 99 9.3. Biological availability (bioavailability) 100 9.3.1. Absolute bioavailability 100 9.3.2. Relative bioavailability 101 9.4. Special cases 102 9.5. Equivalence 102 9.5.1. Therapeutic alternatives 103 9.5.2. Pharmaceutical alternatives 103 9.5.3. Pharmaceutical (chemical) equivalence 103 9.5.4. Bioequivalence 104 9.5.5. Therapeutic equivalence 104 9.5.6. Generic preparations 104 9.6 Biosimilarity 105 10. Drug interactions 108 10.1. Relevance of drug interactions 108 10.2. Classification of drug interactions 108 10.3. Synergisms 110 10.3.1. Additive synergism 110 10.3.2. Potentiating synergism 110 10.4. Antagonisms 111 10.4.1. Chemical antagonism 111 10.4.2. Biological antagonism 112 10.4.3. Functional antagonism 112 10.4.4. Competitive antagonism 112 10.4.5. Non -competitive antagonism 114 10.4.6. Additional types of interactions 115 11. Factors influencing drug action and drug administration 118 11.1. Effects of age – Older patients 118 11.2. Effects of age – Paediatric patients 119 11.3. Sex differences 121 11.4. Body weight 122 11.5. Pregnancy 123 11.6. Genetic factors 124 11.7. Pathological factors 124 12. Non-linear pharmacokinetics and therapeutic drug monitoring 127 12.1. Non -linear pharmacokinetics 127 12.1.1. Relevance of non -linear pharmacokinetics 127 12.1.2. Capacity -limited metabolism 129 12.1.3. Estimation of Michaelis –Menten parameters ( Vmax and KM) 130 12.1.4. Additional possibilities for non -linear pharmacokinetics 132 12.2. Therapeutic drug monitoring (TDM) 133 12.2.1. Individualization of drug therapy 133 12.2.2. Theory of TDM 134 12.2.3. Practice of TDM 136 13. Adverse drug reactions 139 13.1. Classification of adverse drug reactions 139 13.2. Pharmacodynamic variation of genetic polymorphism 144 13.3 Pharmacokinetic variation of genetic polymorphism 145 14. Practical considerations 149 14.1. Important considerations of pharmacokinetic study design 150 14.1.1. Subjects 150 14.1.2. Types of study 150 14.1.3. Dosage form, route of administration 151 14.1.4. Accuracy in administration of the dose 151 14.1.5. Blood samples 152 14.1.6. Sample handling and timing 153 14.1.7. Curve fitting and statistical considerations 154 14.2. Pharmacokinetics and clinical situations 155 15. Suggested readings 159 1. Basic concepts in pharmacology and biopharmacy. Routes of drug administration 1.1. Basic concepts in pharmacology and biopharmacy One of the most important concepts is the pharmacon or drug. This is a synthetic or natural compound or substance which has the capacity to induce a characteristic action on a living organism. The term pharmacon is not limited to substances currently used in medicinal practice. It also involves all biologically active substances with no medical use (e.g. natural and synthetic toxins), all the agents withdrawn from medical use, and agents still under development. A pharmacon is not necessarily a chemically pure substance; it may be an extract from a natural source. The term active pharmaceutical ingredient (API) has a narrower meaning: it is the component in a medicinal preparation from which the therapeutic action is expected. There is no clear definition for the term poison. All pharmacons, including medically used agents, may exert detrimental action after their inappropriate application (e.g. in excessive doses). In a general sense, a poison is a substance which in a low dose has the capacity to cause a serious deterioration of a living organism. A drug usually induces a change in more than one physiological parameter, and therefore exerts more than one action. The main effect is the action for which the drug is administered, and all of the others are side-effects. Although the side-effects are generally unwanted or inconvenient consequences of the therapeutic dose of the given drug, a side-effect can sometimes be advantageous. For example, some of the agents used in psychiatry exert pronounced antihypertensive action, which can be utilized to maintain the optimum blood pressure. The relationship between the main and the side-effects can be relative: it depends on the aim of the drug administration. Atropine has a wide range of pharmacological actions and it could be administered to relax the smooth muscles, to decrease secretions or to constrict sphincters. In any given case, one of these is the main effect and all the others are side-effects. A toxic effect of a drug is always disadvantageous or harmful, and is exerted at a dose higher than the therapeutic dose. A toxic effect is therefore a consequence of an overdosage or intoxication. The site of action is that part of the living organism where the pharmacon exerts its actions. It can be an organ, a group of cells or a subcellular component (e.g. an organelle or even a molecule). Our current knowledge concerning the given drug usually determines the level at which the site of action is defined. For example, the site of action of digitalis glycosides is the 1 heart (as an organ), the cardiac muscle (a group of cells) or the Na/K-ATPase (a subcellular component). The mechanism of action refers to the sequence of reactions leading to the final pharmacological effect. An effect of a pharmacon can be local or general. A local effect is one where that the drug exerts its action only at the site of its application (e.g. antacids in the stomach, or eye drops). A general occurs when the drug is present in the blood circulation and can reach and influence all the possible sites of action in the body. A general effect can develop in two cases: • The drug is administered directly into the circulation (intravascular administration), or • the drug is administered outside the circulation (extravascular administration), but it can move from the site of application into the bloodstream.