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Liste De Référence Fonctionnelle Et Annotée Des Mollusques Continentaux (Mollusca : Gastropoda & Bivalvia) Du Grand-Est (France)

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Liste De Référence Fonctionnelle Et Annotée Des Mollusques Continentaux (Mollusca : Gastropoda & Bivalvia) Du Grand-Est (France) naturae 2019 ● 11 Liste de référence fonctionnelle et annotée des Mollusques continentaux (Mollusca : Gastropoda & Bivalvia) du Grand-Est (France) Jean-Michel BICHAIN, Xavier CUCHERAT, Hervé BRULÉ, Thibaut DURR, Jean GUHRING, Gérard HOMMAY, Julien RYELANDT & Kevin UMBRECHT art. 2019 (11) — Publié le 19 décembre 2019 www.revue-naturae.fr DIRECTEUR DE LA PUBLICATION : Bruno David, Président du Muséum national d’Histoire naturelle RÉDACTEUR EN CHEF / EDITOR-IN-CHIEF : Jean-Philippe Siblet ASSISTANTE DE RÉDACTION / ASSISTANT EDITOR : Sarah Figuet ([email protected]) MISE EN PAGE / PAGE LAYOUT : Sarah Figuet COMITÉ SCIENTIFIQUE / SCIENTIFIC BOARD : Luc Abbadie (UPMC, Paris) Luc Barbier (Parc naturel régional des caps et marais d’Opale, Colembert) Aurélien Besnard (CEFE, Montpellier) Vincent Boullet (Expert indépendant flore/végétation, Frugières-le-Pin) Hervé Brustel (École d’ingénieurs de Purpan, Toulouse) Patrick De Wever (MNHN, Paris) Thierry Dutoit (UMR CNRS IMBE, Avignon) Éric Feunteun (MNHN, Dinard) Romain Garrouste (MNHN, Paris) Grégoire Gautier (DRAAF Occitanie, Toulouse) Olivier Gilg (Réserves naturelles de France, Dijon) Frédéric Gosselin (Irstea, Nogent-sur-Vernisson) Patrick Haffner (UMS PatriNat, Paris) Frédéric Hendoux (MNHN, Paris) Xavier Houard (OPIE, Guyancourt) Isabelle Leviol (MNHN, Concarneau) Francis Meunier (Conservatoire d’espaces naturels – Picardie, Amiens) Serge Muller (MNHN, Paris) Francis Olivereau (DREAL Centre, Orléans) Laurent Poncet (UMS PatriNat, Paris) Nicolas Poulet (AFB, Vincennes) Jean-Philippe Siblet (UMS PatriNat, Paris) Laurent Tillon (ONF, Paris) Julien Touroult (UMS PatriNat, Paris) COUVERTURE / COVER : Le Fuseau commun, Cochlodina laminata laminata (Montagu, 1803). Crédit photo : L. Léonard. Naturae est une revue en flux continu publiée par les Publications scientifiques du Muséum, Paris Naturae is a fast track journal published by the Museum Science Press, Paris Les Publications scientifiques du Muséum publient aussi / The Museum Science Press also publish: Adansonia, Zoosystema, Anthropozoologica, European Journal of Taxonomy, Geodiversitas, Cryptogamie sous-sections Algologie, Bryologie, Mycologie. Diffusion – Publications scientifiques Muséum national d’Histoire naturelle CP 41 – 57 rue Cuvier F-75231 Paris cedex 05 (France) Tél. : 33 (0)1 40 79 48 05 / Fax : 33 (0)1 40 79 38 40 [email protected] / http://sciencepress.mnhn.fr © Publications scientifiques du Muséum national d’Histoire naturelle, Paris, 2019 ISSN (électronique / electronic) : 1638-9387 Liste de référence fonctionnelle et annotée des Mollusques continentaux (Mollusca : Gastropoda & Bivalvia) du Grand-Est (France) Jean-Michel BICHAIN Société d'Histoire Naturelle et d'Ethnographie de Colmar, 11 rue de Turenne, F-68000 Colmar (France) [email protected] Xavier CUCHERAT 10 rue Louis Aragon, F-59147 Gondecourt (France) [email protected] Hervé BRULÉ 11 rue Charlemagne, F-57000 Metz (France) [email protected] Thibaut DURR Jean GUHRING Gérard HOMMAY Société d'Histoire Naturelle et d'Ethnographie de Colmar, 11 rue de Turenne, F-68000 Colmar (France) [email protected] [email protected] [email protected] Julien RYELANDT CBNFC-ORI, 7 rue Voirin, F-25000 Besançon (France) [email protected] Kevin UMBRECHT Société d'Histoire Naturelle et d'Ethnographie de Colmar, 11 rue de Turenne, F-68000 Colmar (France) [email protected] Soumis le 8 février 2019 | Accepté le 12 septembre 2019 | Publié le 19 décembre 2019 Bichain J.-M., Cucherat X., Brulé H., Durr T., Guhring J., Hommay G., Ryelandt J. & Umbrecht K. 2019. — Liste de réfé- rence fonctionnelle et annotée des Mollusques continentaux (Mollusca : Gastropoda & Bivalvia) du Grand-Est (France). Naturae 2019 (11): 285-333. https://doi.org/10.5852/naturae2019a11 RÉSUMÉ Les plateformes collaboratives d’observation de la biodiversité, couplées à des référentiels taxono- miques numériques, permettent désormais de générer automatiquement des listes d’espèces et/ou atlas de répartition à diverses échelles tant temporelles que géographiques. Nous questionnons ici la fiabilité d’une telle liste d’espèces en prenant comme point de départ la pré-liste taxonomique des Mollusques de la région du Grand-Est générée à partir des données d’occurrences disponibles dans le Système d’Information sur la Nature et les Paysages (SINP) et du réferentiel associé TAXREF. Nous montrons que le taux de recouvrement entre cette pré-liste qui cite 233 taxons terminaux et celle élaborée par les auteurs de cet article est de l’ordre de 90 %. Les différences sont liées à 60,7 % à de fausses-absences, à 32,1 % à de fausses-présences et à 7,2 % à des traitements taxonomiques NATURAE • 2019 (11) © Publications scientifiques du Muséum national d’Histoire naturelle, Paris. www.revue-naturae.fr 285 Bichain et al. différents. Au final, nous documentons la présence de 241 taxons terminaux dont 156 Gastéropodes terrestres, 46 Gastéropodes aquatiques et 39 Bivalves. Nous montrons que plus de 40 % des espèces de Mollusques nécessitent une approche conjointe morpho-anatomique pour une identification fiable. C’est pourquoi, cette liste de référence dite fonctionnelle a mis l’accent, pour certains taxons, sur les MOTS CLÉS Données collaboratives, critères spécifiques estimés comme stables et sur le niveau de difficulté lors de l’identification, et ce, validation afin de tenter d’homogénéiser l’implémentation des données d’occurrence et/ou de leur évaluation des données primaires, a posteriori. Nous recommandons que les données primaires enregistrées dans les bases de données SINP-Système d’Information sur la collaboratives fassent référence à des spécimens déposés dans des collections publiques, aux caractères Nature et les Paysages. spécifiques observés et par la transmission de photographie(s) de bonne qualité. ABSTRACT Functional and annotated checklist of the continental molluscs (Mollusca: Gastropoda & Bivalvia) from Grand-Est (France). Collaborative platforms for biodiversity observation, coupled with taxonomic databases, now allow to automatically generate species checklists and/or distribution atlases at various temporal and geo- graphical scales. We assess here the reliability of such automatically generated species checklist using non-marine molluscs from the Grand-Est region as a model. The assessed primary list was gener- ated from the extraction filter of platform of the SINP (Système d’Information sur la Nature et les Paysages) and its associated taxonomic framework TAXREF. This primary list was compared with the taxonomical list independently elaborated by the authors of the present article. We show that the recovery rate between the primary list, citing 233 terminal taxa, and our list is about 90%. The differences correspond to 60.7% of false-absences, 32.1% of false-presences and 7.2% of distinct taxonomic treatments. Finally, we document the presence of 241 terminal taxa including 156 ter- restrial gastropods, 46 aquatic gastropods and 39 bivalves. We show that reliable identification re- quires a combined morpho-anatomical approach for at least 40% of molluscs species. This functional KEY WORDS Collaborative data, ckecklist has, for some taxa, focused on the specific criteria considered as stable and on the level of Validation of primary identification difficulty, in order to homogenize the species occurrence data and/or their a posteriori biodiversity data, evaluation. We recommend that primary data recorded in collaborative databases refer to specimens SINP-Information System on Nature deposited in public collections, the specific characters to be observed, and the transmission of good and Landscapes. quality photograph(s). INTRODUCTION dans les plateformes collaboratives numériques (Gargo- miny et al. 2016). En effet, 100 000 données« Mollusques » Une liste de référence a pour objectif de fournir un état des étaient disponibles en 2016 via la plateforme nationale Car- lieux de la composition spécifique d'un groupe taxonomique dObs (https://cardobs.mnhn.fr/, dernière consultation le donné sur une zone géographique donnée. Son élaboration 21 novembre 2019) de l'Inventaire National du Patrimoine s’appuie, d'une part, sur un corpus de données d'occurrence Naturel (INPN – https://inpn.mnhn.fr/, dernière consulta- et, d'autre part, sur un cadre nomenclatural et taxonomique tion le 21 novembre 2019), dont la moitié a été implémentée fonctionnel qui reflète l'état des connaissances du moment entre 2011 et 2016 (Gargominy et al. 2016). À l'échelle de (Davis 2004 ; Bouchet 2006). Une telle liste est un vecteur l'ancienne région Alsace, la plateforme Faune-Alsace (https:// d'informations pour une large gamme d'utilisateurs depuis les www.faune-alsace.org/, dernière consultation le 21 novembre naturalistes jusqu'aux gestionnaires d'espaces naturels (Gar- 2019) montre la même tendance avec 13 000 données Mol- gominy et al. 2011). Elle peut contribuer, pour les groupes lusques sur la période 1842-2018 dont un tiers enregistré sur peu étudiés comme les Mollusques (Lydeard et al. 2004 ; la seule période 2016-2018 (Bichain et al. 2017). Régnier et al. 2015), ou les Invertébrés d'une manière géné- En outre, ces bases de données sont liées à des référentiels rale (Cardoso et al. 2011), à leur meilleure prise en compte numériques comme MolluscaBase (http://www.molluscabase. dans les stratégies de conservation, notamment dans le cadre org/, dernière consultation le 21 novembre 2019) à l'échelle des enjeux actuels liés à l'érosion massive de la biodiversité mondiale et TAXREF au niveau national (Gargominy
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