And Taxonomy

Total Page:16

File Type:pdf, Size:1020Kb

And Taxonomy Page 165 BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY THE YEASTS= A TAXONOMIC STUDY A Review R. E. Buchanan, Ames, Iowa, U.S.A. This volume of 713 pages by Dr. J. Lodder, mycologist of Koninklijke Nederlandsche Gist- en Spiritusfabriek of Delft and Dr. N. J. W. Kreger van Rij, mycologist of the Cen- traalbureau voor Schimmelcultures, Yeast Division, Delft, is a highly welcome and authoritative summary of our know- ledge of the yeasts. It may be regarded as a revision and condensation of the several volumes on taxonomy and nomen- clature of the yeasts previously prepared by the staffs at Baarn and at Delft. The introductionnotes that specific epithets previously given to yeast species by earlier authors have in general been corrected in this text when not formed in conformity to the articles and recommendations of the revised International Botanical Rules of Nomenclature. After a survey of literature and experience, the authors, for purposes of genera and species differentiation, fix upon six morphological character8 (characteristics of vegetative re- production, shape and size of cells, ascospore formation, ballistospores, and colony characteristics)and twelve physi- ological properties (pellicle formation, fermentation, sugar assimilation, utilization of nitrate, utilization of ethanol as a sole source of carbon, splitting of arbutin, production of carotenoid pigments, production of starch-like compounds , production of esters, reaction in litmus milk, splitting of fat, and acid production). These are clearly defined and the methods for laboratory determination outlined. The taxonomic problems related to yeast variability are re- viewed with understanding and discrimination. The artifi - cia1 nature of the group called yeasts is satisfactorily em- phasiaed, as well as the practical utility of this grouping. Three families are recognized, the E n d o my c e t a c e a e including yeasts which form asci and ascospores, the S Q o r o b o 1 o m y c e t a c e a e which produce so-called bal- listospores on sterigmata fromwhich they are forcibly dis- Page 166 INTERNATIONAL BULLETIN charged, (resembling the spores of the Basidiomyce - -t e s ), and the asporogenous yeaets placed in the C r ypt o - c occaceae. The ascogenous yeasts are included in the fungus class Ascomycetes, the subclass Protascales andthe or- der Endomycetales. Asingle ascogenous yeast fami- ly is recognized, the Endomycetaceae which in turn includes five subfamilies, as follows: Eremascoideae, with one genus Eremascus E nd o my c e toi de a e , with two genera, E nd omyc e s and S c hi z o s a c c ha r o myc e s . S a c c ha r omy c e t oide a e , with three tribes Endomycopseae, with one genus Endomycop- -sis -Sac char omyce te ae ,withfive genera, S acc har o- myces, Pichia, Hansenula, Schwann- iomyces and Debaryomyces. Nadsonieae, with three genera, Saccharomy- codes, Hanseniaspora and Nadsonia. Nematosporoideae, with three genera, Monospo- rella, Nematospora, and Coccidiascus. Lipomycetoideae, with one genus, Lipomyces. There are several anomalies in the above nomenclature that deserve comment. On the basis of the directives of the Bo- tanical Code, the name of the family Endomycetaceae is derived from the name of the containedgenus, E n do my - c e s . The inappropriateness of the family name is evident from the footnote (p. 53) which states:-. "This genus does not belong to the yeasts in the proper sense". The authors do not discuss in detail the priorities of the names Endo- mycetales and Saccharomycetales for the order, nor of Endomycetaceae and Sac char omycetaceae for the family. This failure on the part of the authors to justify the use of names of taxa higher than the genus is un - fortunate. The recognition of Endomycetaceae as the family name is apparently based upon the statement of Stel- ling-Dekker (1931, p. 522) who says:- "Unter diesen Umsthden empfiehlt es sich,die in dieser Abhandlung beschriebenen Organismen - also neben den Page 167 BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY typischen Hefearten auch die Vertreter der Gattung En- d o myc e s - in einer Familie woftir dann der altere =- men Endomycetaceae angebracht ist, vereinigt zu halten. A hasty examination of the literature seems to indicate that the Stelling-Dekker statement may be incorrect. The first definite use of Saccharomycetaceae asafamily name found by the writer is that of DeToni (1889, p. 916) in Saccar- do's Sylloge Fungorum. He ascribes the name to Reess (1870). A study of the paper by Reess fails to confirm such use of the name; the family name was not given by Reess. The first use of the name Endomycetaceae found is that of Schroeter (1897 p.154) in the Pflanzenfamilien of Engler and Prantl. If all of the yeast genera are to be in- cluded in a single family, it would seem that the family name should be Saccharomycetaceae. It is of interest tonote that the authors list three species of Endomyces, describe none of them, and in effect, re- move them from consideration as yeasts. The writer believes that nomenclatural confusion and taxo- nomic difficulties will be minimized if the older differenti- ationof the two families, Saccharomycetaceae and E n d o m y c e t a c e a e is maintained. The apparent nom - enclatural centering of the whole group of yeasts around an ascus-bearing mold (E n domy c e s d e c i p i e n s ) parasi- tic upon the gills of a single species of mushroom makes for confusion. Beginning with the description of the genus Sc hiz o s a c - charomyc e s (p. 81) the format is a model for microbio- logical systematic monographs. The fifteen genera of the E n d o m y c e t a c e a e are differentiated in a well-organiz- ed dichotomous key. For each genus there is included a genericdiagnosis, the designation of the type species of the genus, an historical survey of the generic name, a list of the species recognized, and a dichotomous key to the spec- ies. This is followed by a systematic discussion of each species, including synonyms, original description and his- torical survey, standard description ( morphological and Page 168 INTERNATIONAL BULLETIN physiological characters ), origin and char acte rization of strains studied and designation of the type strain of the species. Drawings of the vegetative and sporulating cells are generally included. One may question the author's ascription for some of the genera, as for example, (p. 116) the genus S a c c ha r om y - -ces (Meyen) Reess. It would seem that this should be S a c c ha r omy c e s Meyen, for this author named both the genus and the type species. Possibly the authors intended Saccharomyces Meyen emend, Reess. Inasmuch as the type species must be one of those included in the first publication of the genus, the type should proba- bly be designatedSaccharomyces cerevisiae Mey- en emend. Hansen. In several other cases the name of the emending author has been substituted for the name of the original proponent of the name. The following comments as to other unresolved nomencla- tural problems may be made. 1. Clements and Shear (1931 p. 246) apparently designated Saccharomycopsis capsularis Schi6nning as the type species of the genus Saccharomycopsis. Lod- der and van Rij (1952) designate S. guttulata as the type species and recognize the trGfeqcap - sularis to the new genus Endomycopsis Dekker {- {- designate (1952) this as the type species of the genus Endomycopsis. A careful review should be made to determine whether by virtue of the designation of the same type species for each of the two genera, the genus E n domy c op s i s is not in fact a later synonym of Saccharomycopsis, It would appear that Sac- charomycopsis guttulata is the type species of a nameless genus. 2. On page 96, and on later pages, the recognized species of each genus are listed "in chronological sequence", that .is, in the order in which they were described. The format used is one that may give rise to a misinterpre - tation. The name ttEndomycopeis capsularis Page 169 BACTERIOLOGICAL NOMENCLATURE AND TAXONOMY (Schihning) Dekker 1913" would usually be interpreted as meaning that Dekker placed the organism in the gen- us Endomycopsis in1913, andnot that Schionning originally described it in that year. 3. The type species of Saccharomyces was designated as -S . c e r e v i s i a e by Clements and Shear (1931 p. 246). 4. (p. 122) Should not the type species have been listed as Saccharomyces cerevisiae Meyen emend. Han- sen ? 5. Reess (not Hansen) named Saccharomyces ellip- soideus, as also -S. exiguus and -S. pas toria- -nus. 6. The genus Deb a r y omyc e s was founded by Klocker upon a single species D. g 1o b o s u s . This would nor - mally, therefore, beregarded as the type species. How- ever, the authors place this first named species in the genus Sacc ha r omyc e s , and as type species desig- nate D e b a r yomy c e s h ans e nii (S acc ha r o my- -ces hansenii Zopf 1889). They further recommend that the emended genus be made a nomen genericum con- servandum. This recommendation is made to avoid the necessity of erecting a new name to replace Deb a r y o - myc e s . Careful consideration should be given to the question of the conservation of the name, such action may raise more problems than it will settle. The mat- ter is somewhat further complicated by the fact that Cle- ments inferentially fixed the type species in his designa- tion of Isomyces globosus (Kl6cker)Clements as the type of the genus I s om y c e s proposed as a replace- ment for Debaryomyces.
Recommended publications
  • A Newsletter for Persons Interested in Yeast
    ISSN 0513-5222 A Newsletter for Persons Interested in Yeast Official Publication of the International Commission on Yeasts of the International Union of Microbiological Societies (IUMS) JUNE 2010 Volume LIX, Number I Marc-André Lachance, Editor University of Western Ontario, London, Ontario, Canada N6A 5B7 <[email protected]> http://publish.uwo.ca/~lachance/YeastNewsletter.html Associate Editors Peter Biely Patrizia Romano Kyria Boundy-Mills Institute of Chemistry Dipartimento di Biologia, Difesa Herman J. Phaff Culture Slovak Academy of e Biotecnologie Agro-Forestali Collection Sciences Università della Basilicata, Department of Food Science and Dúbravská cesta 9, 842 3 Via Nazario Sauro, 85, 85100 Potenza, Technology 8 Bratislava, Slovakia Italy University of California Davis Davis California 95616-5224 F Hagen, Utrecht, The Netherlands . 19 HV Amorim, Pracicaba, Sao Paulo, Brazil . 29 JA Barnett, Norwich, United Kingdom . 20 D Begerow and A Yurkov, Bochum, Germany 29 CA Rosa, Belo Horizonte, D Kregiel, Lodz, Poland ................. 30 Minas Gerais, Brazil .............. 20 M Kopecká, Brno, Czech Republic . 32 WI Golubev, Puschino, Russia . 21 D Libkind, Bariloche, Argentina . 33 GI Naumov and E.S. Naumova, G. Miloshev, Sofia, Bulgaria . 33 Moscow, Russia .................. 22 JP Tamang, Tadong, India . 35 A Bakalinsky, Corvalis, Oregon, USA . 23 MA Lachance, London, Ontario, Canada . 35 H Lee, Guelph, Ontario, Canada . 24 Á Fonseca and JP Sampaio, WM Ingledew, Parksville, Capa Rica, Portugal ............... 36 British Columbia, Canada . 25 Recent Meeting ........................ 38 M Sipiczki, Debrecen, Hungary . 26 Forthcoming Meeting .................... 42 A Speers, Halifax, Nova Scotia, Canada . 27 Publications of interest ................... 43 SO Suh, Manassas, Virgina, USA . 27 Fifty Years Ago ........................ 47 P Venkov, Cherni vrah, Bulgaria .
    [Show full text]
  • Présentée Par : Melle BELHOUCINE Latifa Les Champignons Associés Au Platypus Cylindrus Fab. (Coleoptera, Curculionidae, Platy
    République Algérienne Démocratique Et Populaire Ministère de l’Enseignement Supérieure et de La Recherche Scientifique Université Abou Bakr Belkaid Tlemcen Faculté des Sciences de la Nature et de la Vie et Sciences de la Terre et de l’Univers Département Des Sciences d’Agronomie et des Forêts Présentée par : Melle BELHOUCINE Latifa En vue de l’obtention du diplôme de Doctorat en Sciences Forestières Les champignons associés au Platypus cylindrus Fab. (Coleoptera, Curculionidae, Platypodinae) dans un jeune peuplement de chêne-liège de la forêt de M’Sila (Oran, nord-ouest d’Algérie) : Etude particulière de la biologie et l’épidémiologie de l’insecte Devant le jury composé de: Président : Pr. Letreuch- Belarouci N. Université de Tlemcen Directeur de thèse : Pr. Bouhraoua T.R. Université de Tlemcen Co- Directeur de thèse : Pr. Pujade i-Villar J. Université de Barcelone - Espagne Examinateur : Pr. Chakali G. Université INA Alger Examinateur : Pr. Bellahcene M. Université de Mostaganem Examinateur : Pr. Abdelwahid D. Université de Tlemcen Année 2012-2013 Que ce travail soit un témoignage de ma grande affection pour : - Mon très cher père ; - Ma défunte mère ; - Mes sœurs ; - Mes frères ; - Mes nièces et neveux ; - Mes belles sœurs et beaux frères ; - Mes amis. “It’s the journey that’s important, not the getting there” (John McLeod). L'écriture de cette thèse a été un voyage fascinant plein d'expériences inoubliables. La rédaction d'une thèse est un long voyage, et évidemment pas possible sans le soutien de nombreuses personnes. J'ai été vraiment privilégiée pour commencer mon voyage dans le monde de la science avec de nombreuses personnes inspirantes.
    [Show full text]
  • Identification and Phylogeny of Ascomycetous Yeasts from Analysis
    Antonie van Leeuwenhoek 73: 331–371, 1998. 331 © 1998 Kluwer Academic Publishers. Printed in the Netherlands. Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences Cletus P. Kurtzman∗ & Christie J. Robnett Microbial Properties Research, National Center for Agricultural Utilization Research, Agricultural Research Ser- vice, U.S. Department of Agriculture, Peoria, Illinois 61604, USA (∗ author for correspondence) E-mail: [email protected] Received 19 June 1998; accepted 19 June 1998 Key words: Ascomycetous yeasts, phylogeny, ribosomal DNA, systematics Abstract Approximately 500 species of ascomycetous yeasts, including members of Candida and other anamorphic genera, were analyzed for extent of divergence in the variable D1/D2 domain of large subunit (26S) ribosomal DNA. Divergence in this domain is generally sufficient to resolve individual species, resulting in the prediction that 55 currently recognized taxa are synonyms of earlier described species. Phylogenetic relationships among the ascomycetous yeasts were analyzed from D1/D2 sequence divergence. For comparison, the phylogeny of selected members of the Saccharomyces clade was determined from 18S rDNA sequences. Species relationships were highly concordant between the D1/D2 and 18S trees when branches were statistically well supported. Introduction lesser ranges of nDNA relatedness than those found among heterothallic species. Disadvantages of nDNA reassociation studies in- Procedures commonly used for yeast identification clude the need for pairwise comparisons of all isolates rely on the appearance of cellular morphology and dis- under study and that resolution is limited to the ge- tinctive reactions on a standardized set of fermentation netic distance of sister species, i.e., closely related and assimilation tests.
    [Show full text]
  • Title Melon Aroma-Producing Yeast Isolated from Coastal
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Kyoto University Research Information Repository Melon aroma-producing yeast isolated from coastal marine Title sediment in Maizuru Bay, Japan Sutani, Akitoshi; Ueno, Masahiro; Nakagawa, Satoshi; Author(s) Sawayama, Shigeki Citation Fisheries Science (2015), 81(5): 929-936 Issue Date 2015-09 URL http://hdl.handle.net/2433/202563 The final publication is available at Springer via http://dx.doi.org/10.1007/s12562-015-0912-5.; The full-text file will be made open to the public on 28 July 2016 in Right accordance with publisher's 'Terms and Conditions for Self- Archiving'.; This is not the published version. Please cite only the published version. この論文は出版社版でありません。 引用の際には出版社版をご確認ご利用ください。 Type Journal Article Textversion author Kyoto University 1 FISHERIES SCIENCE ORIGINAL ARTICLE 2 Topic: Environment 3 Running head: Marine fungus isolation 4 5 Melon aroma-producing yeast isolated from coastal marine sediment in Maizuru Bay, 6 Japan 7 8 Akitoshi Sutani1 · Masahiro Ueno2 · Satoshi Nakagawa1· Shigeki Sawayama1 9 10 11 12 __________________________________________________ 13 (Mail) Shigeki Sawayama 14 [email protected] 15 16 1 Laboratory of Marine Environmental Microbiology, Division of Applied Biosciences, 17 Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan 18 2 Maizuru Fisheries Research Station, Field Science Education and Research Center, Kyoto 19 University, Kyoto 625-0086, Japan 1 20 Abstract Researches on marine fungi and fungi isolated from marine environments are not 21 active compared with those on terrestrial fungi. The aim of this study was isolation of novel 22 and industrially applicable fungi derived from marine environments.
    [Show full text]
  • C. P. Kurtzman's Evolving Concepts of Species, Genus and Higher Categories
    FEMS Yeast Research, 18, 2018, foy103 doi: 10.1093/femsyr/foy103 Advance Access Publication Date: 20 September 2018 Minireview MINIREVIEW C. P. Kurtzman’s evolving concepts of species, genus Downloaded from https://academic.oup.com/femsyr/article/18/8/foy103/5104380 by guest on 29 September 2021 and higher categories Marc-Andre´ Lachance Department of Biology, University of Western Ontario, London, ON N6A 5B7, Canada Corresponding author: Tel. 1-519-661-3752; E-mail: [email protected] One sentence summary: Cletus P. Kurtzman revolutionised yeast systematics; this is an overview of the evolution of his thoughts on yeast species, genera and higher categories. Editor: Teun Boekhout ABSTRACT Cletus P. Kurtzman transformed the way yeast systematists practice their trade and how they perceive the yeast species. He redefined many genera of ascomycetous yeasts and provided a sound basis upon which to base higher taxonomic categories. Within his extraordinary corpus lies a trail of elements that can be used to reconstruct his evolving vision of the concepts that underlie the species and the genus, rarely set in a theoretical framework. While occasionally tipping his hat to the biological and phylogenetic species, Kurtzman espoused a concept founded primarily on genetic distance, even when claiming otherwise. In contrast, his notion of genus incorporated components of both genetic distance and phylogenetic structure, and possibly a size consideration. A phylogenetic approach predominated with higher taxa. Keywords: Cletus P. Kurtzman; yeast species; yeast genus; genetic distance; phylogenetics; Ascomycetes INTRODUCTION Kurtzman’s laboratory lived up to the highest standards and implemented forefront methodologies for imaging, ascospore ‘I have never done anything “useful”.
    [Show full text]
  • The Isolation and Identification of Fungi from the Soil in Gardens of Cabbage Were Contaminated with Pesticide Residues in Subdistrict Modoinding
    International Journal of Research in Engineering and Science (IJRES) ISSN (Online): 2320-9364, ISSN (Print): 2320-9356 www.ijres.org Volume 4 Issue 7 ǁ July. 2016 ǁ PP. 25-32 The Isolation and Identification of Fungi from the Soil in Gardens of Cabbage Were Contaminated with Pesticide Residues in Subdistrict Modoinding Stella D. Umboh1), Christina L. Salaki2), Max Tulung2), Lucia C. Mandey2), And Redsway T.D. Maramis2) 1) Doctoral Student at the University of Sam Ratulangi, Manado, North Sulawesi, Indonesia. Mobile Phone: + 62- 81340091042. E-mail: [email protected] 2) Faculty of Agriculture, University of Sam Ratulangi, Manado, North Sulawesi Abstract: Application of pesticides in the garden cabbage can cause negative effects harmful to the environment and living things. The objectives of this research were to get species of fungi from the soil in the gardens of cabbage contaminated with pesticide residues in Subdistrict Modoinding. Isolation of fungi using dilution plate method with serial dilutions of 10-2 to 10-5 on Potato Dextrose Agar (PDA). Of the five soil treatments in the gardens of cabbage obtained 76 isolates of the fungus. Isolates of soil fungi that were successfully identified macroscopically and microscopically. These fungal isolates included in 13 families and 22 species. Fungal species according to the following families: Endomycetaceae (Geotrichum candidum), Trichocomaceae (Penicillium citrinum, Aspergillus fumigatus, Aspergillus nidulans, Paecilomyces lilacinus, Aspergillus foot cell, Aspergillus sydowii, Aspergillus flavus, Aspergillus terreus and Aspergillus niger), Sordariaceae (Chrysonilia sitophila), Mucoraceae (Mucor hiemalis), Pleurostomataceae (Pleurostmophora richardsiae), Hypocreaceae (Gliocladium virens), Pythiaceae (Phytophthora infestans), Chaetomiaceae (Humicola fuscoatra), Eremomycetaceae (Arthrographis cuboidea), incertae sedis (Scytalidium lignicola), Bionectriaceae (Gliocladium roseum) and Arthrodermataceae (Microsporum audouinii).
    [Show full text]
  • Taxonomy of Yeasts
    ^ÍV/-^ TECHmcAL BULLETIN NO. 1029 May 1951 .— 5 Taxonomy of Yeasts By LYNFERD J. WICKERHAM Zymologist Northern Regional Research Laboratory Bureau of Agricultural and Industrial Chemistry Agricultural Research Administration -- ! f^ R A R Y Jüri¿ 51951 U.Î. ainnrmm sf A«RIOüLTURí UNITED STATES DEPARTMENT OF AcKictrLTURE, WASHINGTON, D. C. PREFACE In early attempts at yeast classification, the characteristics em- ployed for separating the larger groups of yeasts were the ability to grow as filaments, the ability to produce asci which consist of two cells fused together, the shape of the ascospores, the ability to pro- duce a gaseous fermentation of one or more sugars, and the ability to produce pellicles on liquid media. Evidence obtained in the present study indicates that the use of the foregoing characteristics led to the unintentional cleavage of natural, or phylogenetic groups into sections. Moreover, sections of different phylogenetic lines which had in common only one or two of the characteristics just mentioned were often assembled into the same genus. These characteristics, applied by Hansen, Barker, and Klocker dur- ing the early 1900's, continue in use as the basis for separating genera and subgenera in the presently accepted system of yeast classification. As a result, all of the larger genera of both the ascosporogenous and nonascosporogenous yeasts contain dissimilar types. The mixing has been thorough—in many cases the true relationships which exist among species of the different genera have been concealed. Correction of this situation by the arrangement of species m what appear to be phylogenetic lines of related species is believed to be a major advance.
    [Show full text]
  • Thrix Schenckii
    DISCOVERY OF ASCOMYCETE CHARACTERISTICS IN SPORO- THRIX SCHENCKII M. Thibaut and M. Ansel Sporothrix schenckii has been stuãied by light microscopy, and also by transmission and scanning electron microscopy. Characteristics of Ascomycetes have been oibserveã at the levei of the cell-wall anã in the synaptic system of the hyphae. Also the perfect state has been discovereã. The four spored asei are formed directly from the mycelium and there is no fructification. Doli- choascus schenckii is the name suggested for this perfect state which constitutes a new genus of the Endomycetaceae. INTRODUCTION tion of the lesions in animais we studied the cytology of the fungus. In light mi­ Sporothrix schenckii is a fungus that croscopy, we went carefully over the clas- can be a parasite on man or animais as sical cytologic and histologic examinations. well as a saprophyte on dead plants. It In electron microscopy, the specimens were can be found in different states: either prepared acoording to methods previously in the saprophytic mycelial phase corres- described by Thibaut (8). They were ob- ponding to its growth in nature and in served first with the transmission elec­ culture, or in the yeast — like cells ob- tron microscope (Hitachi HU 11 B, Sie­ tained in complex cultural conditions cor- mens Elmiskop 1, Jem 100 U and Jem 100 responding to the parasitic state. Until B Jeol) and secondly with the scanning now considered as a Deuteromycete, Spo­ electron microscope (JSM U 3 Jeol). rothrix schenckii owed its generic name and place in classification to the charac­ RESULTS teristics of its asexual reproduetion which was then the only one known.
    [Show full text]
  • Phylogeny of Penicillium and the Segregation of Trichocomaceae Into Three Families
    available online at www.studiesinmycology.org StudieS in Mycology 70: 1–51. 2011. doi:10.3114/sim.2011.70.01 Phylogeny of Penicillium and the segregation of Trichocomaceae into three families J. Houbraken1,2 and R.A. Samson1 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Microbiology, Department of Biology, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. *Correspondence: Jos Houbraken, [email protected] Abstract: Species of Trichocomaceae occur commonly and are important to both industry and medicine. They are associated with food spoilage and mycotoxin production and can occur in the indoor environment, causing health hazards by the formation of β-glucans, mycotoxins and surface proteins. Some species are opportunistic pathogens, while others are exploited in biotechnology for the production of enzymes, antibiotics and other products. Penicillium belongs phylogenetically to Trichocomaceae and more than 250 species are currently accepted in this genus. In this study, we investigated the relationship of Penicillium to other genera of Trichocomaceae and studied in detail the phylogeny of the genus itself. In order to study these relationships, partial RPB1, RPB2 (RNA polymerase II genes), Tsr1 (putative ribosome biogenesis protein) and Cct8 (putative chaperonin complex component TCP-1) gene sequences were obtained. The Trichocomaceae are divided in three separate families: Aspergillaceae, Thermoascaceae and Trichocomaceae. The Aspergillaceae are characterised by the formation flask-shaped or cylindrical phialides, asci produced inside cleistothecia or surrounded by Hülle cells and mainly ascospores with a furrow or slit, while the Trichocomaceae are defined by the formation of lanceolate phialides, asci borne within a tuft or layer of loose hyphae and ascospores lacking a slit.
    [Show full text]
  • The 100 Years of the Fungus Collection Mucl 1894-1994
    THE 100 YEARS OF THE FUNGUS COLLECTION MUCL 1894-1994 Fungal Taxonomy and Tropical Mycology: Quo vadis ? Taxonomy and Nomenclature of the Fungi Grégoire L. Hennebert Catholic University of Louvain, Belgium Notice of the editor This document is now published as an archive It is available on www.Mycotaxon.com It is also produced on CD and in few paperback copies G. L. Hennebert ed. Published by Mycotaxon, Ltd. Ithaca, New York, USA December 2010 ISBN 978-0-930845-18-6 (www pdf version) ISBN 978-0-930845-17-9 (paperback version) DOI 10.5248/2010MUCL.pdf 1894-1994 MUCL Centenary CONTENTS Lists of participants 8 Forword John Webser 13 PLENARY SESSION The 100 Year Fungus Culture Collection MUCL, June 29th, 1994 G.L. Hennebert, UCL Mycothèque de l'Université Catholique de Louvain (MUCL) 17 D. Hawksworth, IMI, U.K. Fungal genetic resource collections and biodiversity. 27 D. van der Mei, CBS, MINE, Netherlands The fungus culture collections in Europe. 34 J. De Brabandere, BCCM, Belgium The Belgian Coordinated Collections of Microorganisms. 40 Fungal Taxonomy and tropical Mycology G.L. Hennebert, UCL Introduction. Fungal taxonomy and tropical mycology: Quo vadis ? 41 C.P. Kurtzman, NRRL, USA Molecular taxonomy in the yeast fungi: present and future. 42 M. Blackwell, Louisiana State University, USA Phylogeny of filamentous fungi deduced from analysis of molecular characters: present and future. 52 J. Rammeloo, National Botanical Garden, Belgium Importance of morphological and anatomical characters in fungal taxonomy. 57 M.F. Roquebert, Natural History Museum, France Possible progress of modern morphological analysis in fungal taxonomy. 63 A.J.
    [Show full text]
  • Cephaloascus Albidus, a New Heterothallic Yeastlike Fungus 1
    4 02 9 "Purchased by the U.S. Department of Agriculture, for official use." Reprinted from MYCOLOGIA, Vol. LXIX, No.3, pp. 547-555, May-June, 1977 Printed in U. S. A. CEPHALOASCUS ALBIDUS, A NEW HETEROTHALLIC YEASTLIKE FUNGUS 1 c. P. KURTZMAN Northern Regional Research Center} Agricultural Research Service} U. S. Department of Agriculture} Peoria} Illinois 61604 SUMMARY The new species Cephaloascus albidus was isolated from cranberry / pumace in ova Scotia, Canada. It differs from the only other known species of Cephaloascus} C. jragrans} in assimilating a greater number of compounds and in being nonpigm,ented and heterothallic. In August 1971, an unidentified yeastlike fungus was received from C. L. Lockhart, Canada Department of Agriculture. The fungus had been isolated from cranberry pumace where it caused an odor of isobutyl acetate. Abundant budding cells as well as true hyphae were produced by the culture, but there was no evidence of a sexual stage. Reexami­ nation of the culture after several months storage in a refrigerator showed the presence of ascospores. Asci were formed in brush-like heads on hyaline ascophores that occasionally were erect and stout. This culture, which represents a new heterothallic species of Cephalo­ ascus) shows a clear relationship to such filamentous yeast genera as Saccharomycopsis Schionning. MATERIALS AD METHODS Methods for carrying out fermentation and assimilation tests, and procedures for morphological examination were previously given by Wickerham (1951). Single ascospore isolates were obtained by micro­ manipulation. All cultures used in this study are maintained by the ARS Culture Collection at the orthern Regional Research Center. Mycelium to be examined by transmission electron microscopy was fixed in 1% potassium permanganate for 1 h and dehydrated through a graded ethanol series (25%, 500/0, 75%, 950/0, 1000/0, 100%, 30-min intervals).
    [Show full text]
  • Taxonomy and Classification
    Bio Factsheet September 2001 Number 91 Taxonomy and Classification By studying this Factsheet the student should gain: • an understanding of the need for classification of organisms and the methods involved in classification. • the ability to use and design dichotomous keys. The principles and importance of taxonomy Exam Hint:- An easy way to remember this order is by using the Classification is the process of sorting a variety of items into manageable saying: King Philip Came Over From Germany Swimming groups. The study of biological classification is called taxonomy or systematics. A universally accepted system of classification is important for scientists if they are to communicate about an organism, confident in A species is defined as a group of organisms that shows many marked the knowledge that they are talking about the same thing. It also enables phenotypic similarities in terms of external morphology, internal anatomy, rapid access to information about a particular type of organism. The aim of biochemistry and behaviour. In addition, individuals within a species have the classification in biology is that it reflects the evolutionary relationships potential to breed with others in the group, producing viable (fertile) offspring (phylogeny) between organisms. As evolutionary knowledge has increased that are themselves capable of producing viable offspring. The species is over the years it has been necessary to modify and update the classification usually taken to be the basic taxon (category) for a classification hierarchy. accordingly. Sometimes it is possible to recognise sufficient, subtle but consistent Methods of classifying organisms variation within members of a species to justify subdividing the group.
    [Show full text]