Of the Leech Helobdella
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The Golden Gate Leech Helobdella Californica (Hirudinea: Glossiphoniidae): Occurrence and DNA-Based Taxonomy of a Species Restricted to San Francisco
Internat. Rev. Hydrobiol. 96 2011 3 286–295 DOI: 10.1002/iroh.201111311 U. KUTSCHERA Institute of Biology, University of Kassel, Heinrich-Plett-Str. 40, D-34109 Kassel, Germany; e-mail: [email protected] Research Paper The Golden Gate Leech Helobdella californica (Hirudinea: Glossiphoniidae): Occurrence and DNA-Based Taxonomy of a Species Restricted to San Francisco key words: leeches, eutrophication, endemic species, DNA barcoding, parental care Abstract Leeches of the genus Helobdella are small brooding annelids that inhabit lakes and streams on every continent, notably in South America. The type species, H. stagnalis L. 1758, occurs in Europe and North America. Here I provide novel observations on the occurrence, morphology, and parental care patterns of the related H. californica, a taxon described in 1988, based on specimens collected in Stow Lake, Golden Gate Park, San Francisco. In 2007, the original H. californica population no longer existed, possibly due to eutrophication of this popular “duck pond”. However, in other, cleaner lakes of the Golden Gate Park dense, stable populations of H. californica were discovered. Between 2007 and 2010 adult individuals were investigated in the laboratory with respect to their pigment patterns and feeding behaviour. The leeches suck the red, haemoglobin-rich haemolymph from insect larvae (Chironomus sp.) and other small aquatic invertebrates and feed their young attached to their ven- tral surface. A typical feeding episode is described and documented. In addition, a neighbour-joining analysis was performed based on a newly acquired DNA sequence of part of the mitochondrial gene cytochrome c oxidase subunit I (CO-I) for H. -
Helobdella Robusta Sp.Nov., and Comparison with Helobdella Triserialis on the Basis of Morphology, Embryology, and Experimental Breeding
Description of the Californian leech Helobdella robusta sp.nov., and comparison with Helobdella triserialis on the basis of morphology, embryology, and experimental breeding MARTYSHANKLAND Department of Anatomy and Cellular Biology, Harvard Medical School, Boston, MA 021 15, U.S. A. SHIRLEYT. BISSEN Department of Biology, University of Missouri, St. Louis, MO 63121, U.S.A. AND DAVIDA. WEISBLAT Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, U.S. A. Received August 2, 199 1 Accepted December 18, 199 1 SHANKLAND,M., BISSEN,S. T., and WEISBLAT,D. A. 1992. Description of the Californian leech Helobdella robusta sp. nov., and comparison with Helobdella triserialis on the basis of morphology, embryology, and experimental breeding. Can. J. Zool. 70: 1258 - 1263. This paper describes the leech Helobdella robusta, which was collected from the Sacramento delta of California. This new species is generally similar to another species found in California, Helobdella triserialis, and the two were compared in detail. In the adult, we observed reliable differences in the relative dimensions of the body, the size of the dorsal papillae, the pattern of cutaneous pigmentation, and the structure of the gut. In the embryo, we observed differences in the appearance of the yolk platelets and the size of the adhesive gland. We also observed differences in the rate of embryonic development. All of these differences persist in breeding populations that have been maintained in the laboratory over many generations. Experimental studies indicate that H. robusta and H. triserialis have little or no proclivity for interbreeding, supporting their distinction as separate species. -
Intermediate Filament Genes As Differentiation Markers in the Leech Helobdella
Dev Genes Evol (2011) 221:225–240 DOI 10.1007/s00427-011-0375-3 ORIGINAL ARTICLE Intermediate filament genes as differentiation markers in the leech Helobdella Dian-Han Kuo & David A. Weisblat Received: 12 August 2011 /Accepted: 8 September 2011 /Published online: 22 September 2011 # Springer-Verlag 2011 Abstract The intermediate filament (IF) cytoskeleton is a evolutionary changes in the cell or tissue specificity of CIFs general feature of differentiated cells. Its molecular compo- have occurred among leeches. Hence, CIFs are not suitable nents, IF proteins, constitute a large family including the for identifying cell or tissue homology except among very evolutionarily conserved nuclear lamins and the more closely related species, but they are nevertheless useful diverse collection of cytoplasmic intermediate filament species-specific differentiation markers. (CIF) proteins. In vertebrates, genes encoding CIFs exhibit cell/tissue type-specific expression profiles and are thus Keywords Cell differentiation . Intermediate filament . useful as differentiation markers. The expression of Gene expression pattern . Helobdella . Leech . Annelid invertebrate CIFs, however, is not well documented. Here, we report a whole-genome survey of IF genes and their developmental expression patterns in the leech Helobdella, Introduction a lophotrochozoan model for developmental biology re- search. We found that, as in vertebrates, each of the leech The intermediate filament (IF) cytoskeleton is a structural CIF genes is expressed in a specific set of cell/tissue types. component that provides mechanical support for the cell. In This allows us to detect earliest points of differentiation for keeping with the large variety of cellular phenotypes, the IF multiple cell types in leech development and to use CIFs as cytoskeleton exhibits a high level of structural diversity and molecular markers for studying cell fate specification in is assembled from a much larger family of proteins leech embryos. -
Identification of Freshwater Invertebrates
Identification of Freshwater Invertebrates © 2008 Pennsylvania Sea Grant To request copies, please contact: Sara Grisé email: [email protected] Table of Contents A. Benthic Macroinvertebrates……………………….………………...........…………1 Arachnida………………………………..………………….............….…2 Bivalvia……………………...…………………….………….........…..…3 Clitellata……………………..………………….………………........…...5 Gastropoda………………………………………………………..............6 Hydrozoa………………………………………………….…………....…8 Insecta……………………..…………………….…………......…..……..9 Malacostraca………………………………………………....…….…....22 Turbellaria…………………………………………….….…..........…… 24 B. Plankton…………………………………………...……….………………............25 Phytoplankton Bacillariophyta……………………..……………………...……….........26 Chlorophyta………………………………………….....…………..........28 Cyanobacteria…...……………………………………………..…….…..32 Gamophyta…………………………………….…………...….…..…….35 Pyrrophycophyta………………………………………………………...36 Zooplankton Arthropoda……………………………………………………………....37 Ciliophora……………………………………………………………......41 Rotifera………………………………………………………………......43 References………………………………………………………….……………….....46 Taxonomy is the science of classifying and naming organisms according to their characteris- tics. All living organisms are classified into seven levels: Kingdom, Phylum, Class, Order, Family, Genus, and Species. This book classifies Benthic Macroinvertebrates by using their Class, Family, Genus, and Species. The Classes are the categories at the top of the page in colored text corresponding to the color of the page. The Family is listed below the common name, and the Genus and Spe- cies names -
The Asymmetric Cell Division Machinery in the Spiral-Cleaving Egg and Embryo of the Marine Annelid Platynereis Dumerilii Aron B
Nakama et al. BMC Developmental Biology (2017) 17:16 DOI 10.1186/s12861-017-0158-9 RESEARCH ARTICLE Open Access The asymmetric cell division machinery in the spiral-cleaving egg and embryo of the marine annelid Platynereis dumerilii Aron B. Nakama1, Hsien-Chao Chou1,2 and Stephan Q. Schneider1* Abstract Background: Over one third of all animal phyla utilize a mode of early embryogenesis called ‘spiral cleavage’ to divide the fertilized egg into embryonic cells with different cell fates. This mode is characterized by a series of invariant, stereotypic, asymmetric cell divisions (ACDs) that generates cells of different size and defined position within the early embryo. Astonishingly, very little is known about the underlying molecular machinery to orchestrate these ACDs in spiral-cleaving embryos. Here we identify, for the first time, cohorts of factors that may contribute to early embryonic ACDs in a spiralian embryo. Results: To do so we analyzed stage-specific transcriptome data in eggs and early embryos of the spiralian annelid Platynereis dumerilii for the expression of over 50 candidate genes that are involved in (1) establishing cortical domains such as the partitioning defective (par) genes, (2) directing spindle orientation, (3) conveying polarity cues including crumbs and scribble, and (4) maintaining cell-cell adhesion between embryonic cells. In general, each of these cohorts of genes are co-expressed exhibiting high levels of transcripts in the oocyte and fertilized single-celled embryo, with progressively lower levels at later stages. Interestingly, a small number of key factors within each ACD module show different expression profiles with increased early zygotic expression suggesting distinct regulatory functions. -
Two New Helobdella Species
Biodiversity Journal, 2020,11 (3): 689–698, https://doi.org/10.31396/Biodiv.Jour.2020.11.3.689.698 http://zoobank.org:pub:8006DBB4-CF4F-4CE4-BAD3-0A7BB4857FC3 Two new Helobdella species (Annelida Hirudinida Glossiphoni- idae) from the Intermountain region of the United States, for- merly considered as Helobdella stagnalis Linnaeus, 1758 Peter Hovingh1 & Ulrich Kutschera2* 1Salt Lake City, 721 Second Avenue, Utah 84103, USA; e-mail: [email protected] 2Institute of Biology, University of Kassel, Heinrich-Plett-Str. 40, 34132 Kassel, Germany; e-mail: [email protected] *Corresponding author ABSTRACT Two Helobdella stagnalis-like leech specimens (Annelida Hirudinida Glossiphoniidae) were histologically examined from Nevada in the Great Basin, and from Utah in the Colorado River Basin (USA) to determine whether or not their crops were similar to those in H. californica Kutschera 1988. The Nevada form was brown and with pigmentation patterns, whereas the Utah form was plain and white. The dorsoventral histological sectioning of these 3 specimens showed the Utah and Nevada forms had compact salivary glands, hitherto noted only in the South American Helobdella and Haementaria species. The pharynx of Nevada individuals was S-shaped, and in the Utah form the ejaculatory ducts formed a Gordian knot in the distal-most posterior region, further distinguishing these 2 intermountain Helobdella-isolates. Comparing these two taxa to other published Helobdella internal morphologies, two new species are pro- posed: Helobdella humboldtensis n. sp. from Nevada (size and pigmentation similar to H. cali- fornica) and Helobdella gordiana n. sp. from Utah, which resembles H. stagnalis from Europe. These findings suggest the Intermountain area may be a prime region to study the evolution of members of the Helobdella species complex. -
Especie Nueva De Sanguijuela Del Género Helobdella (Rhynchobdellida: Glossiphoniidae) Del Lago De Catemaco, Veracruz, México
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Acta Zoológica Mexicana (nueva serie) Acta Zoológica MexicanaActa Zool. (n.s.)Mex. 23(1):(n.s.) 23(1)15-22 (2007) ESPECIE NUEVA DE SANGUIJUELA DEL GÉNERO HELOBDELLA (RHYNCHOBDELLIDA: GLOSSIPHONIIDAE) DEL LAGO DE CATEMACO, VERACRUZ, MÉXICO Alejandro OCEGUERA-FIGUEROA City University of New York (CUNY), Graduate School and University Center y Division of Invertebrate Zoology, American Museum of Natural History. Central Park West at 79th Street, Nueva York, Nueva York, 10024, EUA. [email protected] RESUMEN Se describe una especie nueva de sanguijuela del género Helobdella del Lago de Catemaco, Veracruz, México con base en 23 ejemplares. Los organismos se encontraron adheridos a piedras y raíces a las orillas del lago. La especie nueva carece de placa quitinoide dorsal y se diferencia del resto de las especies del género por presentar la superficie dorsal del cuerpo obscura con manchas blancas de tamaño y distribución muy variable; de tres a cinco hileras dorsales de papilas; glándulas salivales difusas en el parénquima; buche con seis pares de ciegos, el último par forma post-ciegos o divertículos. Palabras Clave: Hirudinea, Glossiphoniidae, Helobdella, Catemaco, México, sanguijuela. ABSTRACT A new leech species of the genus Helobdella from Catemaco Lake, Veracruz, Mexico is described based on the examination of 23 specimens. Leeches were found attached to submerged rocks and plants. The new species lacks a nuchal scute and is distinguishable from other species of the genus by the presence of a obscure dorsal surface with white spots of different size and irregularly arranged; three or five longitudinal rows of dorsal papillae; salivary glands diffused in the parenchyma; six pairs of crop caeca, the posterior pair forming post-caeca or diverticula. -
The Fine Structure of the Eye of the Leech, Helobdella Stagnalis
J. Cell Set. a, 341-348 (1967) 341 Printed in Great Britain THE FINE STRUCTURE OF THE EYE OF THE LEECH, HELOBDELLA STAGNALIS A. W. CLARK* Department of Anatomy, University of Wisconsin, Madison, Wisconsin, U.S.A. SUMMARY The eye of the rhynchobdellid leech, Helobdella stagnalis, has been examined with the electron microscope. The eye is composed of a cup of pigment cells surrounding a compact mass of photo- receptor cells. In addition to pigment granules, the pigment-cell cytoplasm is characterized by mitochondria, a Golgi complex, and profiles of rough-surfaced endoplasmic reticulum. The photoreceptor cell contains a microvillous rhabdomere. The microvilli arise from the membrane of a large intracellular vesicle and obliterate much of its lumen. No connexion between the lumen of the intracellular vesicle and the extracellular space has been observed. The plasmalemma of the photoreceptor cell is folded to form thin pleats of cytoplasm which separate adjacent receptor cells from each other. No glial-like cells have been seen in the receptor cell mass. Directly sub- jacent to the microvilli and surrounding the intracellular vesicle is a tortuous and predominantly smooth-surfaced endoplasmic reticulum. A pair of centrioles is found near the rhabdomere. The cytoplasm around the nucleus is characterized by smooth- and rough-surfaced elements of endoplasmic reticulum, many mitochondria, and a Golgi complex. Proximally, the receptor cell narrows to form a nerve fibre which joins those from other cells to form the optic nerve. INTRODUCTION Leech photoreceptor cells aroused the interest of many classical cytologists and among a few of them (Whitman, 1899; Apathy, 1899) provoked a bitter and vitupera- tive controversy about the structure and derivation of this cell type. -
Evolutionary Crossroads in Developmental Biology: Annelids David E
PRIMER SERIES PRIMER 2643 Development 139, 2643-2653 (2012) doi:10.1242/dev.074724 © 2012. Published by The Company of Biologists Ltd Evolutionary crossroads in developmental biology: annelids David E. K. Ferrier* Summary whole to allow more robust comparisons with other phyla, as well Annelids (the segmented worms) have a long history in studies as for understanding the evolution of diversity. Much of annelid of animal developmental biology, particularly with regards to evolutionary developmental biology research, although by no their cleavage patterns during early development and their means all of it, has tended to concentrate on three particular taxa: neurobiology. With the relatively recent reorganisation of the the polychaete (see Glossary, Box 1) Platynereis dumerilii; the phylogeny of the animal kingdom, and the distinction of the polychaete Capitella teleta (previously known as Capitella sp.); super-phyla Ecdysozoa and Lophotrochozoa, an extra stimulus and the oligochaete (see Glossary, Box 1) leeches, such as for studying this phylum has arisen. As one of the major phyla Helobdella. Even within this small selection of annelids, a good within Lophotrochozoa, Annelida are playing an important role range of the diversity in annelid biology is evident. Both in deducing the developmental biology of the last common polychaetes are marine, whereas Helobdella is a freshwater ancestor of the protostomes and deuterostomes, an animal from inhabitant. The polychaetes P. dumerilii and C. teleta are indirect which >98% of all described animal species evolved. developers (see Glossary, Box 1), with a larval stage followed by metamorphosis into the adult form, whereas Helobdella is a direct Key words: Annelida, Polychaetes, Segmentation, Regeneration, developer (see Glossary, Box 1), with the embryo developing into Central nervous system the worm form without passing through a swimming larval stage. -
Clitellata: Glossiphoniidae) from Mexico with a Review of Mexican Congeners and a Taxonomic Key
Zootaxa 3900 (1): 077–094 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3900.1.4 http://zoobank.org/urn:lsid:zoobank.org:pub:49D15AF9-1D08-4035-BD55-7EE8BD81C3C3 Description of a new leech species of Helobdella (Clitellata: Glossiphoniidae) from Mexico with a review of Mexican congeners and a taxonomic key RICARDO SALAS-MONTIEL1, ANNA J. PHILLIPS2, GERARDO PEREZ-PONCE DE LEON1 & ALEJANDRO OCEGUERA-FIGUEROA1 1Laboratorio de Helmintología “Eduardo Caballero y Caballero”. Instituto de Biología, Universidad Nacional Autónoma de México. Tercer Circuito s/n, Ciudad Universitaria, Copilco, Coyoacán. A.P. 70-153. México, Distrito Federal. C.P.14510 Mexico. E-mail: [email protected]; [email protected]; [email protected] 2Department of Invertebrate Zoology. Smithsonian's National Museum of Natural History. 10th and Constitution Ave NW, Washington, D.C. 20560-0163 USA. E-mail: [email protected] Abstract To date, six species of the leech genus Helobdella have been recorded from Mexico: Helobdella atli, Helobdella elongata, Helobdella octatestisaca, Helobdella socimulcensis, Helobdella virginiae and Helobdella temiscoensis n. sp. This new species is characterized by a lanceolate body, the presence of a nuchal scute, uniform brown pigment on both dorsal and ventral surfaces, the absence of papillae, well-separated eyespots, six pairs of testisacs and five pairs of crop caeca, the last of which forms posterior caeca. In addition, we provide new geographic records for Helobdella species from Mexico resulting from our own collections, vouchers deposited at the Colección Nacional de Helmintos from the Instituto de Bi- ología, UNAM, Mexico and vouchers at the Invertebrate Zoology Collection of the Smithsonian’s National Museum of Natural History (USNM) Washington D.C., USA. -
Sexual Conflict in Self-Fertile Hermaphrodites
bioRxiv preprint doi: https://doi.org/10.1101/401901; this version posted September 16, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Sexual conflict in self-fertile hermaphrodites: reproductive differences among species, and between individuals versus cohorts, in the leech genus Helobdella (Lophotrochozoa; Annelida; Clitellata; Hirudinida; Glossiphoniidae) 2 1 1 1 *Roshni G. Iyer , *D. Valle Rogers , Christopher J. Winchell and David A. Weisblat 1 Dept. of Molecular & Cell Biology, 385 LSA, Univ. of California, Berkeley, CA 94720-3200, USA 2 Dept. of Electrical Engineering & Computer Sciences, Univ. of California, Berkeley, CA 94720-3200, USA *These authors contributed equally to the work. August 13, 2018 ABSTRACT Leeches and oligochaetes comprise a monophyletic group of annelids, the Clitellata, whose reproduction is characterized by simultaneous hermaphroditism. While most clitellate species reproduce by cross-fertilization, self-fertilization has been described within the speciose genus Helobdella. Here we document the reproductive life histories and reproductive capacities for three other Helobdella species. Under laboratory conditions, both H. robusta and H. octatestisaca exhibit uniparental reproduction, apparently reflecting self-fertility, and suggesting that this trait is ancestral for the genus. -
Joint Genome Institute PROGRESS REPORT 2006 JGI’S Mission
U.S. DEPARTMENT OF ENERGY Joint Genome Institute PROGRESS REPORT 2006 JGI’s Mission The U.S. Department of Energy Joint Genome Institute (JGI), supported by the DOE Office of Science, is focused on the application of Genomic Sciences to support the DOE mission areas of clean energy generation, global carbon management, and environmental characterization and clean-up. JGI’s Production Genomics Facility in Walnut Creek, California , provides integrated high-throughput sequencing and compu- tational analysis that enable systems-based scientific approaches to these challenges. In addition, the Institute engages both technical and scientific partners at five national laboratories, Lawrence Berkeley, Lawrence Livermore, Los Alamos, Oak Ridge, and Pacific Northwest, along with the Stanford Human Genome Center. U.S. DEPARTMENT OF ENERGY Joint Genome Institute PROGRESS REPORT 2006 table of contents Director’s Perspective + + + + + + + + + + + + + + + + + + + + + iv JGI History + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 6 JGI Departments and Programs + + + + + + + + + + + + + + 8 JGI Users + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + 11 The Benefits of Biofuels + + + + + + + + + + + + + + + + + + + 14 The JGI Sequencing Process + + + + + + + + + + + + + + + 1 6 Science Behind the Sequence Highlights: Biomass to Biofuels + + + + + + + + + + + + + + 18 Carbon Cycling + + + + + + + + + + + + + + + + + + + + + + + + + + 22 Bioremediation + + + + + + + + + + + + + + + + + + + + + + + + + + 24 Exploratory Sequence-Based