C-Terminal-Binding Protein Interacting Protein Binds Directly to Adenovirus Early Region 1A Through Its N-Terminal Region and Conserved Region 3

Total Page:16

File Type:pdf, Size:1020Kb

C-Terminal-Binding Protein Interacting Protein Binds Directly to Adenovirus Early Region 1A Through Its N-Terminal Region and Conserved Region 3 Oncogene (2007) 26, 7467–7479 & 2007 Nature Publishing Group All rights reserved 0950-9232/07 $30.00 www.nature.com/onc ORIGINAL ARTICLE C-terminal-binding protein interacting protein binds directly to adenovirus early region 1A through its N-terminal region and conserved region 3 RK Bruton1, M Rasti1, KL Mapp1, N Young1, RZ Carter1, IA Abramowicz1, GG Sedgwick1, DF Onion1, M Shuen2, JS Mymryk2, AS Turnell1 andRJA Grand 1 1Cancer Research UK Institute for Cancer Studies, The Medical School, University of Birmingham, Birmingham, UK and 2Departments of Oncology and Microbiology and Immunology, University of Western Ontario, Ontario, Canada C-terminal-binding protein interacting protein (CtIP) was Introduction first isolated as a binding partner of C-terminal-binding protein (CtBP). It is considered to contribute to the Adenovirus early region 1A (AdE1A) is the first protein transcriptional repression and cell cycle regulatory to be expressedfollowing adenovirus infection andis properties of the retinoblastoma (Rb) family of proteins essential for adenovirus E1-mediated transformation and to have a role in the cellular response to DNA (reviewedby Gallimore andTurnell, 2001; Berk, 2005). damage. Here, we have shown that CtIP is a novel target Two major E1A proteins are translatedfrom 13S and for the adenovirus oncoprotein early region 1A (AdE1A). 12S messenger RNAs differing only by the presence of AdE1A associates with CtIP in both Ad5E1-transformed a short amino-acidsequence locatedtowardsthe C cells and Ad5-infected cells and binds directly in terminus of the larger molecule. Comparison of the glutathione-S-transferase pull-down assays. Two binding amino-acid sequences of AdE1As from different viral sites have been mapped on Ad5E1A – the N-terminal serotypes indicates the presence of four highly conserved a-helical region (residues 1–30) and conserved region regions (CRs) locatedthroughout the molecule (Avva- 3(CR3)– the transcriptional activation domain. CtIP kumov et al., 2002, 2004). CR3 co-incides with the region can bind AdE1A and CtBP independently, raising the unique to the 13S mRNA product. AdE1A exerts its possibility that ternary complexes exist in Ad-transformed influence on infectedandtransformedcells through a and -infected cells. Significantly, reduction of CtIP complex series of protein–protein interactions (Galli- expression with small interfering RNAs results in reduc- more andTurnell, 2001). Most of the bindingsites for tion of the ability of a Gal4 DNA-binding domain-CR3 the cellular targets of AdE1A correspond to either the construct to transactivate a Gal 4-responsive luciferase CRs or to the N-terminal a-helical region. For example, reporter and this effect is reversed by reduction of CtBP the retinoblastoma (Rb) family of proteins bindto CR1 expression. Therefore, in this model, CtIP acts as a andCR2 (Dyson et al., 1992), p300 andCREB-binding transcriptional co-activator of AdE1A when dissociated protein (CBP) interact with the N-terminal region and from CtBP, through the action of AdE1A. These data CR1 (Eckner et al., 1994; Arany et al., 1995), while CtBP are consistent with observations that CtIP expression interacts with CR4 (Boyd et al., 1993). The modular is induced by AdE1A during viral infection and that nature of AdE1A has facilitated the mapping of protein- reduction of CtIP expression with RNA interference can binding sites and linking of biological functions to retard virus replication. In addition, AdE1A causes particular interactions andtherefore to certain regions of disruption of the CtIP/Rb complex during viral infection E1A. Binding of the Rb family or CBP/p300 is necessary by its interaction with CtIP, possibly contributing to for AdE1A to promote S phase entry, but binding of transcriptional derepression. both sets of proteins is required for AdE1A-mediated Oncogene (2007) 26, 7467–7479; doi:10.1038/sj.onc.1210551; transformation (Egan et al., 1988; Jelmsa et al., 1989; publishedonline 4 June 2007 Howe et al., 1990; Wang et al., 1993). CR3 contains a zinc (Zn2 þ )-finger motif andis the site of interaction with Keywords: adenovirus E1A; C-terminal-binding protein a number of proteins involvedin transcriptional regula- interacting protein; CtIP; C-terminal-binding protein; tion (Culp et al., 1988; Geisberg et al., 1994, 1995; Rasti CtBP et al., 2006). These interactions with proteins such as TATA-binding protein (TBP), associated transcription factor (ATFs), suppressor of ras (Sur2) mediator 23 (MED23), proteasomal components andtrans-acting factors are necessary for transcriptional activation and Correspondence: Dr R Grand, Cancer Research UK Institute for for the expression of other viral early region proteins Cancer Studies, The Medical School, University of Birmingham, (reviewedby Jones, 1995; Avvakumov et al., 2004). Edgbaston, Birmingham, West Midlands, B15 2TT, UK. E-mail: [email protected] CR1, CR2 andCR3 are encodedby exon 1 of AdE1A Received15 June 2006; revised24 April 2007; accepted26 April 2007; andthis area of the protein is responsible for most of the publishedonline 4 June 2007 observedinteractions. However, the bindingsite for the CtIP binds directly to adenovirus early region 1A RK Bruton et al 7468 ubiquitous corepressor CtBP has been mappedto a CtBP, we investigatedthe relationship between CtIP and highly conservedPXDLS motif in CR4 in exon 2 (Boyd AdE1A and examined the possibility of direct interac- et al., 1993; Schaeper et al., 1995). Loss of binding of tion between the two proteins. When Ad5E1A was CtBP by AdE1A results in retarded viral replication immunoprecipitatedfrom Ad5E1-transformedcells (Grand et al., 2006). Significantly, the effect of binding (293) or from MCF7 cells infectedwith wt Ad5, CtIP of CtBP on AdE1A-mediated transformation is context was identified by western blotting as a co-precipitating dependent. Deletion of the C-terminal region of AdE1A protein (Figure 1a andc). In complementary experi- reduces the frequency of transformation by AdE1A ments, CtIP was immunoprecipitatedfrom Ad5E1- together with AdE1B, but increases the frequency of transformedandAd5-infectedcell lysates and transformation by AdE1A and activated ras (Douglas co-precipitating Ad5E1A was identified by Western et al., 1991; Subramanian et al., 1989, 1991). CtBP has blotting following electrophoresis on ‘urea gels’ in the been shown to interact with a large number of absence of sodium dodecylsulphate (SDS) (Figure 1b mammalian transcriptional repressors, such as BKLF, and d). The observation that Ad5E1A with a deletion Ikaros, Net andthe Drosophila repressors Snail, Hairy encompassing the CtBP-binding site (dl 1135) co- andKnirps as well as histone deacetylases (HDACs) immunoprecipitates with CtIP suggests that the inter- (reviewedby Turner andCrossley, 2001; Chinnadurai, action is not mediated through CtBP (Figure 1d). CtIP 2002, 2004, 2006a, 2007). andAd12E1A were also co-immunoprecipitatedfrom The first mammalian CtBP-binding protein to be Ad12E1-transformed cells (Figure 1e). It is also notable isolatedwas C-terminal-bindingprotein interacting pro- that CtIP bound to Ad126f10E1A, which does not tein (CtIP). Like AdE1A, CtIP interacts with CtBP via a interact with CtBP (Grand et al., 2006) (Figure 1e). PXDLS motif andE1A may compete with CtIP for (Rather less CtIP appearedto be co-immunoprecipi- interaction with CtBP (Schaeper et al., 1998). The role of tatedfrom the rat cells than the human, possibly dueto CtIP is not clear – it binds to the Rb family and it has been reduced expression or the inability of the antibody to suggestedthat this is responsible for some of the recognize rat CtIP). In a further set of experiments, transcriptional repression properties of Rb through [35S]-labelledCtIP or CtBP1 were incubatedwith recruitment of CtBP andassociatedHDACs (Meloni glutathione-S-transferase (GST)-Ad512S and 13SE1A et al., 1999). CtIP also regulates Rb-dependent cell cycle or GST-Ad5E1A exons 1 and 2 (Figure 2). CtIP bound arrest in G1 through the modulation of Rb phosphoryla- directly to full-length Ad5E1A and Ad5E1A exon 1 tion (Chen et al., 2005). CtIP binds to breast cancer (expressedas GST-fusions), whereas CtBP1 interacted associated1 (BRCA1) andis involvedin the cellular with exon 2, confirming that the AdE1A/CtIP interac- response to DNA double strand breaks, being phosphory- tion is not mediated through CtBP. latedby ataxia telangiectasia mutated(ATM) (Wong et al., 1998; Yu et al., 1998; Li et al., 1999, 2000; Wu-Baer Dissociation constant for CtIP and Ad12E1A andBaer, 2001; Yu andChen, 2004). Significantly, Using enzyme-linkedimmunosorbant assays (ELISAs), BRCA1 catalyses CtIP ubiquitination andco-localizes the apparent K for AdE1A binding to CtIP has been with CtIP in DNA damaged-induced foci (Yu et al., 2006). d comparedwith values obtainedfor CtBP1 andCtBP2. Although the precise role of CtIP has yet to be determined PurifiedAd1213SE1A was coatedonto an ELISA plate in detail the protein must be of considerable importance to andGST-CtBP1, GST-CtBP2, GST-CtIP amino acids the functioning of the normal cell since CtIP knock-out 324–897 andGST-CtIP amino acids371–620 were mice die at an early stage in development (E4) largely serially diluted across the plate. Bound protein was through cell cycle arrest in G (Chen et al., 2005). 1 determined using an anti-GST antibody (Figure 3). Because of its close relationship to the Rb family of Using the Origin 7.5 software package apparent K s proteins andCtBP, we have consideredthe possibility d were determined. They were found to be 6, 2, 5 and that CtIP itself might be a novel target for AdE1A. Here, 79 nM for CtBP1, CtBP2, CtIP (324–897) andCtIP we have shown that these proteins interact independently (371–620), respectively. Thus, Ad12E1A has a similar of CtBP or Rb. CtIP binds to the N-terminal region and affinity for CtIP (324–897) as for CtBP 1 and2, CR3 of AdE1A regulating the ability of a Gal4 DNA- although binding to the shorter CtIP polypeptide is binding domain (DBD)-CR3 construct to transactivate a appreciably weaker. Gal-4-responsive luciferase reporter. This is consistent with our observation that knock down of CtIP expres- sion can retardthe rate of viral replication.
Recommended publications
  • A Pathogenic Ctbp1 Missense Mutation Causes Altered Cofactor Binding and Transcriptional Activity
    neurogenetics (2019) 20:129–143 https://doi.org/10.1007/s10048-019-00578-1 ORIGINAL ARTICLE A pathogenic CtBP1 missense mutation causes altered cofactor binding and transcriptional activity David B. Beck1 & T. Subramanian2 & S. Vijayalingam2 & Uthayashankar R. Ezekiel3 & Sandra Donkervoort4 & Michele L. Yang5 & Holly A. Dubbs6 & Xilma R. Ortiz-Gonzalez7 & Shenela Lakhani8 & Devorah Segal9 & Margaret Au10 & John M. Graham Jr10 & Sumit Verma11 & Darrel Waggoner12 & Marwan Shinawi13 & Carsten G. Bönnemann4 & Wendy K. Chung14 & G. Chinnadurai2 Received: 23 October 2018 /Revised: 18 March 2019 /Accepted: 9 April 2019 /Published online: 30 April 2019 # Springer-Verlag GmbH Germany, part of Springer Nature 2019 Abstract We previously reported a pathogenic de novo p.R342W mutation in the transcriptional corepressor CTBP1 in four independent patients with neurodevelopmental disabilities [1]. Here, we report the clinical phenotypes of seven additional individuals with the same recurrent de novo CTBP1 mutation. Within this cohort, we identified consistent CtBP1-related phenotypes of intellectual disability, ataxia, hypotonia, and tooth enamel defects present in most patients. The R342W mutation in CtBP1 is located within a region implicated in a high affinity-binding cleft for CtBP-interacting proteins. Unbiased proteomic analysis demonstrated reduced interaction of several chromatin-modifying factors with the CtBP1 W342 mutant. Genome-wide transcriptome analysis in human glioblastoma cell lines expressing -CtBP1 R342 (wt) or W342 mutation revealed changes in the expression profiles of genes controlling multiple cellular processes. Patient-derived dermal fibroblasts were found to be more sensitive to apoptosis during acute glucose deprivation compared to controls. Glucose deprivation strongly activated the BH3-only pro-apoptotic gene NOXA, suggesting a link between enhanced cell death and NOXA expression in patient fibroblasts.
    [Show full text]
  • A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
    Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated.
    [Show full text]
  • A Genome-Wide Transcriptomic Analysis of Embryos Fathered By
    www.nature.com/scientificreports OPEN A genome‑wide transcriptomic analysis of embryos fathered by obese males in a murine model of diet‑induced obesity Laura Bernhardt1, Marcus Dittrich1,2, Rabih El‑Merahbi3, Antoine‑Emmanuel Saliba4, Tobias Müller2, Grzegorz Sumara3,5, Jörg Vogel4,6, Stefanie Nichols‑Burns7,8, Megan Mitchell7,9, Thomas Haaf1 & Nady El Hajj1,10* Paternal obesity is known to have a negative impact on the male’s reproductive health as well as the health of his ofspring. Although epigenetic mechanisms have been implicated in the non‑ genetic transmission of acquired traits, the efect of paternal obesity on gene expression in the preimplantation embryo has not been fully studied. To this end, we investigated whether paternal obesity is associated with gene expression changes in eight‑cell stage embryos fathered by males on a high‑fat diet. We used single embryo RNA‑seq to compare the gene expression profle of embryos generated by males on a high fat (HFD) versus control (CD) diet. This analysis revealed signifcant upregulation of the Samd4b and Gata6 gene in embryos in response to a paternal HFD. Furthermore, we could show a signifcant increase in expression of both Gata6 and Samd4b during diferentiation of stromal vascular cells into mature adipocytes. These fndings suggest that paternal obesity may induce changes in the male germ cells which are associated with the gene expression changes in the resulting preimplantation embryos. Global obesity rates have more than doubled over the past three decades1. Despite increasing recognition of the problem, the prevalence of obesity is rising in most countries worldwide.
    [Show full text]
  • A Mechanism of COOH–Terminal Binding Protein– Mediated Repression
    A Mechanism of COOH–Terminal Binding Protein– Mediated Repression Alison R. Meloni,1 Chun-Hsiang Lai,2 Tso-Pang Yao,2 and Joseph R. Nevins1,3 Departments of 1Molecular Genetics and Microbiology and 2Pharmacology and Cancer Biology and 3Duke Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina Abstract repression involves the recruitment of histone deacetylase The E2F4 and E2F5 proteins specifically associate with (HDAC) to E2F site–containing promoters, presumably the Rb-related p130 protein in quiescent cells to repress resulting in an alteration of chromatin conformation that transcription of various genes encoding proteins hinders transcription (7-9). important for cell growth. A series of reports has Several observations suggest that additional events, inde- provided evidence that Rb-mediated repression involves pendent of HDAC recruitment, may contribute to the both histone deacetylase (HDAC)–dependent and repression. For example, many genes subject to E2F/Rb- HDAC-independent events. Our previous results mediated repression are not derepressed by treatment with the suggest that one such mechanism for Rb-mediated HDAC inhibitor trichostatin A (7). Moreover, Rb mutants that repression, independent of recruitment of HDAC, can no longer interact with HDAC are still capable of repressing involves the recruitment of the COOH-terminal binding transcription (10, 11). Based on these observations, it would protein (CtBP) corepressor, a protein now recognized to seem that HDAC-independent mechanisms of transcriptional play a widespread role in transcriptional repression. We repression contribute to the Rb control of transcription. Indeed, now find that CtBP can interact with the histone several Rb-interacting proteins, such as the chromatin remodel- acetyltransferase, cyclic AMP–responsive element– ing complex proteins BRG1 and human BRM, the methyl- binding protein (CREB) binding protein, and inhibit its transferase protein SUV39H1, and RBP1, have been shown to ability to acetylate histone.
    [Show full text]
  • Data-Mining Approach for Screening of Rare Genetic Elements Associated
    Turk J Biochem 2019; 44(6): 848–854 Research Article Muhammad Zubair Mahboob, Arslan Hamid, Nada Mushtaq, Sana Batool, Hina Batool, Nadia Zeeshan, Muhammad Ali, Kalsoom Sughra* and Naeem Mahmood Ashraf* Data-mining approach for screening of rare genetic elements associated with predisposition of prostate cancer in South-Asian populations Güney Asya Popülasyonlarında Prostat Kanseri Predispozisyonuyla İlişkili Nadir Genetik Elementlerin Taranmasında Veri Madenciliği Yaklaşımı https://doi.org/10.1515/tjb-2018-0454 Materials and methods: Genome-wide association studies Received November 9, 2018; accepted May 23, 2019; previously (GWAS) catalog and Gene Expression Omnibus (GEO) fur- published online August 30, 2019 nished PCa-related genetic studies. Database for Anno- Abstract tation, Visualization and Integrated Discovery (DAVID) functionally annotated these genes and wANNOVAR sep- Objective: Prostate cancer (PCa) is a complex heterogene- arated South Asian (SAS) populations – specific genetic ous disease and a major health risk to men throughout the factors at MAF threshold <0.05. world. The potential tumorigenic genetic hallmarks asso- Results: The study reports 195 genes as potential contribu- ciated with PCa include sustaining proliferative signaling, tors to prostate cancer in SAS populations. Some of iden- resisting cell death, aberrant androgen receptor signal- tified genes are PYGO2, RALBP1, RFX5, SLC22A3, VPS53, ing, androgen independence, and castration resistance. HMCN1 and KIF1C. Despite numerous comprehensive genome-wide associa- Conclusion: The identified genetic elements may assist in tion studies (GWAS), certain genetic elements associated development of population-specific screening and man- with PCa are still unknown. This situation demands more agement strategies for PCa. Moreover, this approach may systematic GWAS studies in different populations.
    [Show full text]
  • VHL Inactivation Without Hypoxia Is Sufficient to Achieve Genome Hypermethylation
    bioRxiv preprint doi: https://doi.org/10.1101/093310; this version posted December 12, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. VHL inactivation without hypoxia is sufficient to achieve genome hypermethylation Artem V. Artemov1*, Nadezhda Zhigalova1, Svetlana Zhenilo1, Alexander M. Mazur1 and Egor B. Prokhortchouk1 1 Institute of Bioengineering, Research Center of Biotechnology RAS, Moscow, Russian Federation * [email protected] Abstract VHL inactivation is a key oncogenic event for renal carcinomas. In normoxia, VHL suppresses HIF1a-mediated response to hypoxia. It has previously been shown that hypoxic conditions inhibit TET-dependent hydroxymethylation of cytosines and cause DNA hypermethylation at gene promoters. In this work, we performed VHL inactivation by CRISPR/Cas9 and studied its effects on gene expression and DNA methylation. We showed that even without hypoxia, VHL inactivation leads to hypermethylation of the genome which mainly occurred in AP-1 and TRIM28 binding sites. We also observed promoter hypermethylation of several transcription regulators associated with decreased gene expression. Keywords DNA methylation; VHL; hypoxia; HIF1a; JUN; FOS Introduction Sequencing of cancer genomes was initially aimed to find cancer drivers, or genes, that, once mutated, give a selective advantage to a cancer cell, such as increased proliferation, suppression of apoptosis or the ability to avoid immune response. VHL is a key oncosuppressor gene for kidney cancer. Inactivation of the VHL gene is the most common event in renal carcinomas, accounting for 50{70% of sporadic cases (Scelo et al. 2014; Cancer Genome Atlas Research Network 2013; Thomas et al.
    [Show full text]
  • Transcriptional and Epigenetic Control of Brown and Beige Adipose Cell Fate and Function
    REVIEWS Transcriptional and epigenetic control of brown and beige adipose cell fate and function Takeshi Inagaki1,2, Juro Sakai1,2 and Shingo Kajimura3 Abstract | White adipocytes store excess energy in the form of triglycerides, whereas brown and beige adipocytes dissipate energy in the form of heat. This thermogenic function relies on the activation of brown and beige adipocyte-specific gene programmes that are coordinately regulated by adipose-selective chromatin architectures and by a set of unique transcriptional and epigenetic regulators. A number of transcriptional and epigenetic regulators are also required for promoting beige adipocyte biogenesis in response to various environmental stimuli. A better understanding of the molecular mechanisms governing the generation and function of brown and beige adipocytes is necessary to allow us to control adipose cell fate and stimulate thermogenesis. This may provide a therapeutic approach for the treatment of obesity and obesity-associated diseases, such as type 2 diabetes. Interscapular BAT Adipose tissue has a central role in whole-body energy subjects who had previously lacked detectable BAT Brown adipose tissue (BAT) is a homeostasis. White adipose tissue (WAT) is the major depots before cold exposure, presumably owing to the specialized organ that adipose organ in mammals. It represents 10% or more emergence of new thermogenic adipocytes. This, then, produces heat. BAT is localized of the body weight of healthy adult humans and is leads to an increase in non-shivering thermogenesis in the interscapular and 6–9 perirenal regions of rodents specialized for the storage of excess energy. Humans and/or an improvement in insulin sensitivity . These and infants.
    [Show full text]
  • Ctbp1/2 Differentially Regulate Genomic Stability and DNA Repair
    Oncogenesis www.nature.com/oncsis ARTICLE OPEN CtBP1/2 differentially regulate genomic stability and DNA repair pathway in high-grade serous ovarian cancer cell ✉ YingYing He 1, Zhicheng He 2,3, Jian Lin 2,3, Cheng Chen2,3, Yuanzhi Chen 2,3 and Shubai Liu 2,3 © The Author(s) 2021 The C-terminal binding proteins (CtBPs), CtBP1 and CtBP2, are transcriptional co-repressor that interacts with multiple transcriptional factors to modulate the stability of chromatin. CtBP proteins were identified with overexpression in the high-grade serous ovarian carcinoma (HGSOC). However, little is known about CtBP proteins’ regulatory roles in genomic stability and DNA repair in HGSOC. In this study, we combined whole-transcriptome analysis with multiple research methods to investigate the role of CtBP1/2 in genomic stability. Several key functional pathways were significantly enriched through whole transcription profile analysis of CtBP1/2 knockdown SKOV3 cells, including DNA damage repair, apoptosis, and cell cycle. CtBP1/2 knockdown induced cancer cell apoptosis, increased genetic instability, and enhanced the sensitivity to DNA damage agents, such as γ-irradiation and chemotherapy drug (Carboplatin and etoposide). The results of DNA fiber assay revealed that CtBP1/2 contribute differentially to the integrity of DNA replication track and stability of DNA replication recovery. CtBP1 protects the integrity of stalled forks under metabolic stress condition during prolonged periods of replication, whereas CtBP2 acts a dominant role in stability of DNA replication recovery. Furthermore, CtBP1/2 knockdown shifted the DSBs repair pathway from homologous recombination (HR) to non-homologous end joining (NHEJ) and activated DNA-PK in SKOV3 cells.
    [Show full text]
  • A Role for Mediator Complex Subunit MED13L in Rb&Sol;E2F-Induced
    Oncogene (2012) 31, 4709 --4717 & 2012 Macmillan Publishers Limited All rights reserved 0950-9232/12 www.nature.com/onc ORIGINAL ARTICLE A role for Mediator complex subunit MED13L in Rb/E2F-induced growth arrest SP Angus and JR Nevins The Rb/E2F pathway is deregulated in virtually all human tumors. It is clear that, in addition to Rb itself, essential cofactors required for transcriptional repression and silencing of E2F target genes are mutated or lost in cancer. To identify novel cofactors required for Rb/E2F-mediated inhibition of cell proliferation, we performed a genome-wide short hairpin RNA screen. In addition to several known Rb cofactors, the screen identified components of the Mediator complex, a large multiprotein coactivator required for RNA polymerase II transcription. We show that the Mediator complex subunit MED13L is required for Rb/E2F control of cell growth, the complete repression of cell cycle target genes, and cell cycle inhibition. Oncogene (2012) 31, 4709--4717; doi:10.1038/onc.2011.622; published online 16 January 2012 Keywords: tumor suppressor; cell cycle; senescence INTRODUCTION Typically, the levels of CDKN2A are greatly increased, leading to The retinoblastoma tumor suppressor (Rb) is a critical negative the accumulation of active, hypophosphorylated Rb. Senescent regulator of cellular proliferation that is frequently inactivated in cells characteristically exhibit flat-cell morphology and are positive 20 human cancer.1,2 In its active form, Rb binds to the members of for senescence-associated beta-galactosidase (SA-b-gal) activity. 21 the E2F family of transcription factors and either suppresses their Additionally, Narita et al. described the formation of senescence- transactivation function or assembles an active repressor com- associated heterochromatic foci at E2F promoters during V12 plex.3 E2F family members are essential regulators of genes Ras -induced senescence.
    [Show full text]
  • Ctbp2 Downregulation During Neural Crest Specification Induces Expression of Mitf and REST, Resulting in Melanocyte Differentiat
    MOLECULAR AND CELLULAR BIOLOGY, Mar. 2011, p. 955–970 Vol. 31, No. 5 0270-7306/11/$12.00 doi:10.1128/MCB.01062-10 Copyright © 2011, American Society for Microbiology. All Rights Reserved. CtBP2 Downregulation during Neural Crest Specification Induces Expression of Mitf and REST, Resulting in Melanocyte Differentiation and Sympathoadrenal Lineage Suppressionᰔ Hongzi Liang,1 Donna M. Fekete,2 and Ourania M. Andrisani1* Departments of Basic Medical Sciences1 and Biological Sciences,2 Purdue University and Purdue Center for Cancer Research, West Lafayette, Indiana 47907 Received 10 September 2010/Returned for modification 17 October 2010/Accepted 21 December 2010 Trunk neural crest (NC) cells differentiate to neurons, melanocytes, and glia. In NC cultures, cyclic AMP (cAMP) induces melanocyte differentiation while suppressing the neuronal sympathoadrenal lineage, depend- ing on the signal intensity. Melanocyte differentiation requires activation of CREB and cAMP-dependent protein kinase A (PKA), but the role of PKA is not understood. We have demonstrated, in NC cultures, cAMP-induced transcription of the microphthalmia-associated transcription factor gene (Mitf) and the RE-1 silencing transcription factor gene (REST), both Wnt-regulated genes. In NC cultures and zebrafish, knock- down of the corepressor of Wnt-mediated transcription C-terminal binding protein 2 (CtBP2) but not CtBP1 derepressed Mitf and REST expression and enhanced melanocyte differentiation. cAMP in NC and B16 melanoma cells decreased CtBP2 protein levels, while inhibition of PKA or proteasome rescued CtBP2 degradation. Interestingly, knockdown of homeodomain-interacting protein kinase 2 (HIPK2), a CtBP stability modulator, increased CtBP2 levels, suppressed expression of Mitf, REST, and melanocyte differentiation, and increased neuronal gene expression and sympathoadrenal lineage differentiation.
    [Show full text]
  • Supplemental Figure 1. Protein-Protein Interaction Network with Increased Expression in Fteb During the Luteal Phase
    Supplemental Figure 1. Protein-protein interaction network with increased expression in FTEb during the luteal phase. Supplemental Figure 2. Protein-protein interaction network with decreased expression in FTEb during luteal phase. LEGENDS TO SUPPLEMENTAL FIGURES Supplemental Figure 1. Protein-protein interaction network with increased expression in FTEb during the luteal phase. Submission of probe sets differentially expressed in the FTEb specimens that clustered with SerCa as well as those specifically altered in FTEb luteal samples to the online I2D database revealed overlapping networks of proteins with increased expression in the four FTEb samples and/or FTEb luteal samples overall. Proteins are represented by nodes, and known and predicted first-degree interactions are represented by solid lines. Genes encoding proteins shown as large ovals highlighted in blue were exclusively found in the first comparison (Manuscript Figure 2), whereas those highlighted in red were only found in the second comparison (Manuscript Figure 3). Genes encoding proteins shown as large ovals highlighted in black were found in both comparisons. The color of each node indicates the ontology of the corresponding protein as determined by the Online Predicted Human Interaction Database (OPHID) link with the NAViGaTOR software. Supplemental Figure 2. Protein-protein interaction network with decreased expression in FTEb during the luteal phase. Submission of probe sets differentially expressed in the FTEb specimens that clustered with SerCa as well as those specifically altered in FTEb luteal samples to the online I2D database revealed overlapping networks of proteins with decreased expression in the four FTEb samples and/or FTEb luteal samples overall. Proteins are represented by nodes, and known and predicted first-degree interactions are represented by solid lines.
    [Show full text]
  • Defining the Role of Ctbp2 in P53-Independent Umort Suppressor Function of ARF: a Dissertation
    University of Massachusetts Medical School eScholarship@UMMS GSBS Dissertations and Theses Graduate School of Biomedical Sciences 2009-06-11 Defining the Role of CtBP2 in p53-Independent umorT Suppressor Function of ARF: A Dissertation Ramesh C. Kovi University of Massachusetts Medical School Let us know how access to this document benefits ou.y Follow this and additional works at: https://escholarship.umassmed.edu/gsbs_diss Part of the Amino Acids, Peptides, and Proteins Commons, Cells Commons, Genetic Phenomena Commons, and the Neoplasms Commons Repository Citation Kovi RC. (2009). Defining the Role of CtBP2 in p53-Independent umorT Suppressor Function of ARF: A Dissertation. GSBS Dissertations and Theses. https://doi.org/10.13028/86d1-1y04. Retrieved from https://escholarship.umassmed.edu/gsbs_diss/433 This material is brought to you by eScholarship@UMMS. It has been accepted for inclusion in GSBS Dissertations and Theses by an authorized administrator of eScholarship@UMMS. For more information, please contact [email protected]. Defining the Role of CtBP2 in p53-independent Tumor Suppressor Function of ARF A Dissertation Presented By Ramesh C. Kovi Submitted to the Faculty of the University of Massachusetts Graduate School of Biomedical Sciences, Worcester in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY CANCER BIOLOGY June 11, 2009 TO THE CHERISHED MEMORY OF MY MOTHER Mrs. CHOWDAMMA iv Copyright Notice Parts of this dissertation have appeared in separate publications: Kovi RC, Paliwal S, Pande S and Grossman SR. 2009. An ARF/CtBP2 complex regulates BH3-only gene expression and p53-independent apoptosis. Cell Death and Differentiation (in press).
    [Show full text]