Piriformospora Indica
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Endophytic Fungi: Biological Control and Induced Resistance to Phytopathogens and Abiotic Stresses
pathogens Review Endophytic Fungi: Biological Control and Induced Resistance to Phytopathogens and Abiotic Stresses Daniele Cristina Fontana 1,† , Samuel de Paula 2,*,† , Abel Galon Torres 2 , Victor Hugo Moura de Souza 2 , Sérgio Florentino Pascholati 2 , Denise Schmidt 3 and Durval Dourado Neto 1 1 Department of Plant Production, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba 13418900, Brazil; [email protected] (D.C.F.); [email protected] (D.D.N.) 2 Plant Pathology Department, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba 13418900, Brazil; [email protected] (A.G.T.); [email protected] (V.H.M.d.S.); [email protected] (S.F.P.) 3 Department of Agronomy and Environmental Science, Frederico Westphalen Campus, Federal University of Santa Maria, Frederico Westphalen 98400000, Brazil; [email protected] * Correspondence: [email protected]; Tel.: +55-54-99646-9453 † These authors contributed equally to this work. Abstract: Plant diseases cause losses of approximately 16% globally. Thus, management measures must be implemented to mitigate losses and guarantee food production. In addition to traditional management measures, induced resistance and biological control have gained ground in agriculture due to their enormous potential. Endophytic fungi internally colonize plant tissues and have the potential to act as control agents, such as biological agents or elicitors in the process of induced resistance and in attenuating abiotic stresses. In this review, we list the mode of action of this group of Citation: Fontana, D.C.; de Paula, S.; microorganisms which can act in controlling plant diseases and describe several examples in which Torres, A.G.; de Souza, V.H.M.; endophytes were able to reduce the damage caused by pathogens and adverse conditions. -
Morphology and Molecules: the Sebacinales, a Case Study
Mycol Progress DOI 10.1007/s11557-014-0983-1 ORIGINAL ARTICLE Morphology and molecules: the Sebacinales, a case study Franz Oberwinkler & Kai Riess & Robert Bauer & Sigisfredo Garnica Received: 4 April 2014 /Accepted: 8 April 2014 # German Mycological Society and Springer-Verlag Berlin Heidelberg 2014 Abstract Morphological and molecular discrepancies in the irregular germinating spores and inconspicuous cystidia, and biodiversity of monophyletic groups are challenging. The S. flagelliformis with flagelliform dikaryophyses from intention of this study was to find out whether the high S. epigaea s.str. Additional clades in Sebacina, based on molecular diversity in Sebacinales can be verified by micro- molecular differences, cannot be distinguished morphologi- morphological characteristics. Therefore, we carried out mo- cally at present. lecular and morphological studies on all generic type species of Sebacinales and additional representative taxa. Our results encouraged us to disentangle some phylogenetic and taxo- Introduction nomic discrepancies and to improve sebacinalean classifica- tions. This comprises generic circumscriptions and affilia- Based on longitudinally septate meiosporangia in their mature tions, as well as higher taxon groupings. At the family level, stage, sebacinoid fungi were originally grouped together with we redefined the Sebacinaceae, formerly the Sebacinales tremelloid and exidioid taxa. Sebacinales in the present cir- group A, and set it apart from the Sebacinales group B. For cumscription were reviewed in detail recently (Oberwinkler taxonomical purposes, it seems appropriate to refer et al. 2013). We refer to this publication for traditional classi- Paulisebacina, Craterocolla, Chaetospermum, fication of genera and interpretation of some species. Here, we Globulisebacina, Tremelloscypha, and Sebacina to the summarize data that accumulated within several years of Sebacinaceae and Piriformospora, and Serendipita to the intensive sampling, from morphological and molecular stud- Sebacinales group B. -
A Higher-Level Phylogenetic Classification of the Fungi
mycological research 111 (2007) 509–547 available at www.sciencedirect.com journal homepage: www.elsevier.com/locate/mycres A higher-level phylogenetic classification of the Fungi David S. HIBBETTa,*, Manfred BINDERa, Joseph F. BISCHOFFb, Meredith BLACKWELLc, Paul F. CANNONd, Ove E. ERIKSSONe, Sabine HUHNDORFf, Timothy JAMESg, Paul M. KIRKd, Robert LU¨ CKINGf, H. THORSTEN LUMBSCHf, Franc¸ois LUTZONIg, P. Brandon MATHENYa, David J. MCLAUGHLINh, Martha J. POWELLi, Scott REDHEAD j, Conrad L. SCHOCHk, Joseph W. SPATAFORAk, Joost A. STALPERSl, Rytas VILGALYSg, M. Catherine AIMEm, Andre´ APTROOTn, Robert BAUERo, Dominik BEGEROWp, Gerald L. BENNYq, Lisa A. CASTLEBURYm, Pedro W. CROUSl, Yu-Cheng DAIr, Walter GAMSl, David M. GEISERs, Gareth W. GRIFFITHt,Ce´cile GUEIDANg, David L. HAWKSWORTHu, Geir HESTMARKv, Kentaro HOSAKAw, Richard A. HUMBERx, Kevin D. HYDEy, Joseph E. IRONSIDEt, Urmas KO˜ LJALGz, Cletus P. KURTZMANaa, Karl-Henrik LARSSONab, Robert LICHTWARDTac, Joyce LONGCOREad, Jolanta MIA˛ DLIKOWSKAg, Andrew MILLERae, Jean-Marc MONCALVOaf, Sharon MOZLEY-STANDRIDGEag, Franz OBERWINKLERo, Erast PARMASTOah, Vale´rie REEBg, Jack D. ROGERSai, Claude ROUXaj, Leif RYVARDENak, Jose´ Paulo SAMPAIOal, Arthur SCHU¨ ßLERam, Junta SUGIYAMAan, R. Greg THORNao, Leif TIBELLap, Wendy A. UNTEREINERaq, Christopher WALKERar, Zheng WANGa, Alex WEIRas, Michael WEISSo, Merlin M. WHITEat, Katarina WINKAe, Yi-Jian YAOau, Ning ZHANGav aBiology Department, Clark University, Worcester, MA 01610, USA bNational Library of Medicine, National Center for Biotechnology Information, -
Sebacinales: a Hitherto Overlooked Cosm of Heterobasidiomycetes with a Broad Mycorrhizal Potential*
Mycol. Res. 108 (9): 1003–1010 (September 2004). f The British Mycological Society 1003 DOI: 10.1017/S0953756204000772 Printed in the United Kingdom. Sebacinales: a hitherto overlooked cosm of heterobasidiomycetes with a broad mycorrhizal potential* Michael WEISS1**, Marc-Andre´SELOSSE2, Karl-Heinz REXER3, Alexander URBAN4 and Franz OBERWINKLER1 1 Botanisches Institut, Universita¨tTu¨bingen, Auf der Morgenstelle 1, D-72076 Tu¨bingen, Germany. 2 UMR CNRS 7138, Syste´matique, Adaptation et Evolution, Muse´um d’Histoire Naturelle, 43 rue Cuvier, F-75005 Paris, France. 3 Fachbereich Biologie, Universita¨t Marburg, Karl-von Frisch-Straße 1, D-35032 Marburg, Germany. 4 Institut fu¨r Botanik, Universita¨t Wien, Rennweg 14, A-1030 Wien, Austria. E-mail : [email protected] Received 28 April 2004; accepted 16 June 2004. Within the basidiomycetes, the vast majority of known mycorrhizal species are homobasidiomycetes. It was therefore surprising when molecular and ultrastructural studies revealed a broad diversity of mycorrhizal associations involving members of the heterobasidiomycetous Sebacinaceae, fungi which, due to their inconspicuous basidiomes, have been often overlooked. To investigate the phylogenetic position of the Sebacinaceae within the basidiomycetes and to infer phylogenetic relationships within the Sebacinaceae, we made molecular phylogenetic analyses based on nuclear rDNA. We present a well-resolved phylogeny of the main lineages of basidiomycetes which suggests that the Sebacinaceae is the most basal group with known mycorrhizal members. Since more basal taxa of basidiomycetes consist of predominantly mycoparasitic and phytoparasitic fungi, it seems possible that a mycorrhizal life strategy, which was transformed into a saprotrophic strategy several times convergently, is an apomorphic character for the Hymenomycetidae. -
Biotechnological Applications of Piriformosporaindica
Research Article Adv Biotech & Micro - Volume 3 Issue 4 May 2017 Copyright © All rights are reserved by Ajit Varma DOI: 10.19080/AIBM.2017.03.555616 Biotechnological Applications of Piriformospora indica (Serendipita indica) DSM 11827 Uma1, Ruchika Bajaj2, Diksha Bhola1, Sangeeta Singh3 and AjitVarma1* 1R&D department, International Panaacea limited, India 2University of Minnesota Twin Cities, Minneapolis, United States 3Amity Institute of Microbial Technology, Amity University, India 4ICFRE, Arid Forest Research Institute, India Submission: March 14, 2017; Published: May 24, 2017 *Corresponding author: Ajit Varma, Amity Institute of Microbial Technology, Amity University, NOIDA, Uttar Pradesh 201303, India, Email: Abstract Piriformospora indica (Hymenomycetes, Basidiomycota) is a cultivable endophyte that colonizes roots and has been extensively studied. P. indica has multifunctional activities like plant growth promoter, biofertilizer, immune-modulator, bioherbicide, phyto remediator, etc. Growth promotional characteristics of P. indica outcomes. Certain secondary metabolites produced by the intense interaction between the mycobiont and photobiont may be responsible for such promising outputs. P. indica have been studied in enormous number of plants and majority of them have shown highly significant mycobiont has added value to these medicinal plant with special emphasis on Curcuma longa L. (Turmeric) and Plantago ovata (Isabgol) in has proved to be highly beneficial endophyte with high efficacy in field. This article is a review where this theKeywords: agricultural Piriformospora field. indica; Medicinal plants; Growth promoter Introduction Piriformospora indica, a model organism of the order Sebacinales, promotes growth as well as important active ingredients of several medicinal as well as economically important plants by forming root endophytic associations [1-7]. P. -
Piriformospora Indica, a Cultivable Plant-Growth-Promoting Root
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, June 1999, p. 2741–2744 Vol. 65, No. 6 0099-2240/99/$04.0010 Copyright © 1999, American Society for Microbiology. All Rights Reserved. Piriformospora indica, a Cultivable Plant-Growth-Promoting Root Endophyte AJIT VARMA,1,2 SAVITA VERMA,2† SUDHA,2 NIRMAL SAHAY,2 BRITTA BU¨ TEHORN,1 1 AND PHILIPP FRANKEN * Max-Planck-Institut fu¨r terrestrische Mikrobiologie, Abteilung Biochemie and Laboratorium fu¨r Mikrobiologie des Fachbereichs Biologie der Philipps-Universita¨t,35043 Marburg, Germany,1 and School of Life Science, Jawaharlal Nehru University, New Delhi 110067, India2 Received 29 June 1998/Accepted 23 December 1998 Piriformospora indica (Hymenomycetes, Basidiomycota) is a newly described cultivable endophyte that col- Downloaded from onizes roots. Inoculation with the fungus and application of fungal culture filtrate promotes plant growth and biomass production. Due to its ease of culture, this fungus provides a model organism for the study of beneficial plant-microbe interactions and a new tool for improving plant production systems. Fungi interact with plants as pathogens or benefactors and tremula L.) plantlets. After germination or micropropagation, may influence yields in agroforestry and floriculture. Knowl- plantlets of maize (1 week after germination), tobacco and pars- edge concerning plant-growth-promoting cultivable root endo- ley (2 weeks after germination), and A. annua, B. monnieri, and phytes is low (7), and most studies have been conducted with poplar (4 weeks of micropropagation) were placed in pots mycorrhizal fungi. These mutualists improve the growth of (9-cm height by 10-cm diameter) containing expanded clay (2 http://aem.asm.org/ crops on poor soils with lower inputs of chemical fertilizers and to 4 mm in diameter). -
Transcriptional Responses of Soybean Roots to Colonization With
www.nature.com/scientificreports OPEN Transcriptional responses of soybean roots to colonization with the root endophytic fungus Received: 20 November 2017 Accepted: 15 May 2018 Piriformospora indica reveals Published: xx xx xxxx altered phenylpropanoid and secondary metabolism Ruchika Bajaj1,2, Yinyin Huang1, Sebhat Gebrechristos3, Brian Mikolajczyk4, Heather Brown5, Ram Prasad 2, Ajit Varma2 & Kathryn E. Bushley1 Piriformospora indica, a root endophytic fungus, has been shown to enhance biomass production and confer tolerance to various abiotic and biotic stresses in many plant hosts. A growth chamber experiment of soybean (Glycine max) colonized by P. indica compared to uninoculated control plants showed that the fungus signifcantly increased shoot dry weight, nutrient content, and rhizobial biomass. RNA-Seq analyses of root tissue showed upregulation of 61 genes and downregulation of 238 genes in colonized plants. Gene Ontology (GO) enrichment analyses demonstrated that upregulated genes were most signifcantly enriched in GO categories related to lignin biosynthesis and regulation of iron transport and metabolism but also mapped to categories of nutrient acquisition, hormone signaling, and response to drought stress. Metabolic pathway analysis revealed upregulation of genes within the phenylpropanoid and derivative pathways such as biosynthesis of monolignol subunits, favonoids and favonols (luteolin and quercetin), and iron scavenging siderophores. Highly enriched downregulated GO categories included heat shock proteins involved -
A Renaissance in Plant Growth- Promoting and Biocontrol Agents By
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by ICRISAT Open Access Repository A Renaissance in Plant Growth- Promoting and Biocontrol Agents 3 by Endophytes Rajendran Vijayabharathi , Arumugam Sathya , and Subramaniam Gopalakrishnan Abstract Endophytes are the microorganisms which colonize the internal tissue of host plants without causing any damage to the colonized plant. The benefi - cial role of endophytic organisms has dramatically documented world- wide in recent years. Endophytes promote plant growth and yield, remove contaminants from soil, and provide soil nutrients via phosphate solubili- zation/nitrogen fi xation. The capacity of endophytes on abundant produc- tion of bioactive compounds against array of phytopathogens makes them a suitable platform for biocontrol explorations. Endophytes have unique interaction with their host plants and play an important role in induced systemic resistance or biological control of phytopathogens. This trait also benefi ts in promoting plant growth either directly or indirectly. Plant growth promotion and biocontrol are the two sturdy areas for sustainable agriculture where endophytes are the key players with their broad range of benefi cial activities. The coexistence of endophytes and plants has been exploited recently in both of these arenas which are explored in this chapter. Keywords Endophytes • PGP • Biocontrol • Bacillus • Piriformospora • Streptomyces 3.1 Introduction Plants have their life in soil and are required for R. Vijayabharathi • A. Sathya • S. Gopalakrishnan (*) soil development. They are naturally associated International Crops Research Institute for the Semi-Arid Tropics (ICRISAT) , with microbes in various ways. They cannot live Patancheru 502 324 , Telangana , India alone and hence they release signal to interact with e-mail: [email protected] microbes. -
The Endophytic Fungus Piriformospora Indica Reprograms Banana to Cold Resistance
International Journal of Molecular Sciences Article The Endophytic Fungus Piriformospora indica Reprograms Banana to Cold Resistance Dan Li 1 , David Mahoudjro Bodjrenou 1, Shuting Zhang 1, Bin Wang 1, Hong Pan 1, Kai-Wun Yeh 1, Zhongxiong Lai 1,* and Chunzhen Cheng 1,2,* 1 Institute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China; [email protected] (D.L.); [email protected] (D.M.B.); [email protected] (S.Z.); [email protected] (B.W.); [email protected] (H.P.); [email protected] (K.-W.Y.) 2 College of Horticulture, Shanxi Agricultural University, Taigu 030801, China * Correspondence: [email protected] (Z.L.); [email protected] (C.C.) Abstract: Banana (Musa spp.), one of the most important fruits worldwide, is generally cold sensitive. In this study, by using the cold-sensitive banana variety Tianbaojiao (Musa acuminate) as the study material, we investigated the effects of Piriformospora indica on banana cold resistance. Seedlings with and without fungus colonization were subjected to 4 ◦C cold treatment. The changes in plant phenotypes, some physiological and biochemical parameters, chlorophyll fluorescence parameters, and the expression of eight cold-responsive genes in banana leaves before and after cold treatment were measured. Results demonstrated that P. indica colonization reduced the contents of malondi- aldehyde (MDA) and hydrogen peroxide (H2O2) but increased the activities of superoxide dismutase (SOD) and catalase (CAT) and the contents of soluble sugar (SS) and proline. Noteworthily, the CAT activity and SS content in the leaves of P. indica-colonized banana were significant (p < 0.05). After 24 h cold treatment, the decline in maximum photochemistry efficiency of photosystem II (Fv/Fm), Citation: Li, D.; Bodjrenou, D.M.; photochemical quenching coefficient (qP), efficient quantum yield [Y(II)], and photosynthetic electron Zhang, S.; Wang, B.; Pan, H.; Yeh, transport rate (ETR) in the leaves of P. -
The Endophytic Fungus Piriformospora Indica Reprograms Barley to Salt-Stress Tolerance, Disease Resistance, and Higher Yield
The endophytic fungus Piriformospora indica reprograms barley to salt-stress tolerance, disease resistance, and higher yield Frank Waller*†, Beate Achatz*†‡, Helmut Baltruschat*†,Jo´ zsef Fodor§, Katja Becker¶, Marina Fischer¶, Tobias Heier*, Ralph Hu¨ ckelhoven*, Christina Neumann*, Diter von Wettsteinʈ, Philipp Franken‡, and Karl-Heinz Kogel*,** *Institute of Phytopathology and Applied Zoology, University of Giessen, D-35392 Giessen, Germany; ‡Institute for Vegetables and Ornamental Crops, D-14979 Grossbeeren, Germany; §Plant Protection Institute, Hungarian Academy of Sciences, H-1525 Budapest, Hungary; ¶Institute of Nutritional Biochemistry, University of Giessen, D-35392 Giessen, Germany; and ʈDepartment of Crop and Soil Sciences, Washington State University, Pullman, WA 99164-6420 Contributed by Diter von Wettstein, May 31, 2005 Disease resistance strategies are powerful approaches to sustain- nuclear DNA sequences from the D1͞D2 region of the large able agriculture because they reduce chemical input into the ribosomal subunit (12). In contrast to arbuscular mycorrhiza environment. Recently, Piriformospora indica, a plant-root-coloniz- fungi, the fungus can be easily cultivated in axenic cultures, ing basidiomycete fungus, has been discovered in the Indian Thar where it asexually forms chlamydospores containing 8–25 nuclei desert and was shown to provide strong growth-promoting activ- (10). The fungus associates with roots of various plant species, ity during its symbiosis with a broad spectrum of plants [Verma, S. where it promotes plant growth. Hosts include the cereal crops et al. (1998) Mycologia 90, 896–903]. Here, we report on the rice, wheat, and barley as well as many Dicotyledoneae, including potential of P. indica to induce resistance to fungal diseases and Arabidopsis (13, 14). -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA. -
A Higher Level Classification of All Living Organisms
RESEARCH ARTICLE A Higher Level Classification of All Living Organisms Michael A. Ruggiero1*, Dennis P. Gordon2, Thomas M. Orrell1, Nicolas Bailly3, Thierry Bourgoin4, Richard C. Brusca5, Thomas Cavalier-Smith6, Michael D. Guiry7, Paul M. Kirk8 1 Integrated Taxonomic Information System, National Museum of Natural History, Smithsonian Institution, Washington, District of Columbia, United States of America, 2 National Institute of Water & Atmospheric Research, Wellington, New Zealand, 3 WorldFish—FIN, Los Baños, Philippines, 4 Institut Systématique, Evolution, Biodiversité (ISYEB), UMR 7205 MNHN-CNRS-UPMC-EPHE, Sorbonne Universités, Museum National d'Histoire Naturelle, 57, rue Cuvier, CP 50, F-75005, Paris, France, 5 Department of Ecology & Evolutionary Biology, University of Arizona, Tucson, Arizona, United States of America, 6 Department of Zoology, University of Oxford, Oxford, United Kingdom, 7 The AlgaeBase Foundation & Irish Seaweed Research Group, Ryan Institute, National University of Ireland, Galway, Ireland, 8 Mycology Section, Royal Botanic Gardens, Kew, London, United Kingdom * [email protected] Abstract We present a consensus classification of life to embrace the more than 1.6 million species already provided by more than 3,000 taxonomists’ expert opinions in a unified and coherent, OPEN ACCESS hierarchically ranked system known as the Catalogue of Life (CoL). The intent of this collab- orative effort is to provide a hierarchical classification serving not only the needs of the Citation: Ruggiero MA, Gordon DP, Orrell TM, Bailly CoL’s database providers but also the diverse public-domain user community, most of N, Bourgoin T, Brusca RC, et al. (2015) A Higher Level Classification of All Living Organisms. PLoS whom are familiar with the Linnaean conceptual system of ordering taxon relationships.